RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBXN11 (Homo sapiens)

Ensembl gene IDs: ENSG00000158062

Ensembl transcript IDs: ENST00000314675.11, ENST00000357089.8, ENST00000374215.5, ENST00000374217.6, ENST00000374221.7, ENST00000374222.5, ENST00000374223.5, ENST00000421827.2, ENST00000423664.5, ENST00000442942.6, ENST00000450041.5, ENST00000452980.5, ENST00000472155.5, ENST00000475591.5, ENST00000494942.5, ENST00000496466.1

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTaGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCC +
Preference number: 1 (lower is better)
Translates to: WLPPAKHWGRHPAWH*LMGTSVGSISQSSA
Trigger: GGCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR TCA 90 bp TGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTaGTGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAAAG +
Preference number: 1 (lower is better)
Translates to: CPQPSIGAAILPGTG*WAPLLVPSARALPK
Trigger: CTTTGGCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp AAATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTaGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGC +
Preference number: 1 (lower is better)
Translates to: KCWLPPAKHWGRHPA*HWLMGTSVGSISQS
Trigger: GCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAGCCAGCATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR GCA 90 bp TGTGCGGTGTTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTaGACAGGTATCTGCTGGCTGCACACATACACAGTGAGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: CAVLKCPHELVGLCL*TGICWLHTYTVRLC
Trigger: GCAGAGCCTCACTGTGTATGTGTGCAGCCAGCAGATACCTGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp GCCCTGGGCAAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTaGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTG +
Preference number: 1 (lower is better)
Translates to: ALGKVGSCDCAETAL*EGWLSCSLVTVTSV
Trigger: CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTTGCCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp CTGTCAGTGAGTGTGGCCATCCCATGCGCCTGTGTTGGAGCACAATaGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: LSVSVAIPCACVGAQ*LRMSVSWEVGTQLQ
Trigger: CTGCAGCTGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAGGCGCATGGGATGGCCACACTCACTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp ATCTCCATGCCTGTCAGTGAGTGTGGCCATCCCATGCGCCTGTGTTaGAGCACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTAC +
Preference number: 1 (lower is better)
Translates to: ISMPVSECGHPMRLC*STMAKNECIMGGGY
Trigger: GTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAGGCGCATGGGATGGCCACACTCACTGACAGGCATGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp GAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTaGGGGCATGGGTCTAGTGGCAAAATGGCTTTGTGCGGTGTTGAA +
Preference number: 1 (lower is better)
Translates to: ECIMGGGYPAAVLLI*GHGSSGKMALCGVE
Trigger: TTCAACACCGCACAAAGCCATTTTGCCACTAGACCCATGCCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp CCACCCTCCAGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTaGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCAT +
Preference number: 1 (lower is better)
Translates to: PPSSSHACVHIMLVP*CVVHISMPVSECGH
Trigger: ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTaGGTGGGCCACCCTCCAGTTCACATGCATGTGTCCATATCATGC +
Preference number: 1 (lower is better)
Translates to: LTHKYLYGPVVSGDV*VGHPPVHMHVSISC
Trigger: GCATGATATGGACACATGCATGTGAACTGGAGGGTGGCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp TTGGATATGTCTGACACACAAATACCTGTATGGACCAGTGGTTTCTaGAGATGTCTGGGTGGGCCACCCTCCAGTTCACATGCATGTGTC +
Preference number: 1 (lower is better)
Translates to: LDMSDTQIPVWTSGF*RCLGGPPSSSHACV
Trigger: GACACATGCATGTGAACTGGAGGGTGGCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGACATATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 90 bp AAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTaGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGTTTGTTAGT +
Preference number: 1 (lower is better)
Translates to: KVGSCDCAETALWEG*LSCSLVTVTSVFVS
Trigger: ACTAACAAACACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR GCA 90 bp AGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGCAGGCCTTTCCTACGTaGCTGGCGAGATGGCCCACC +
Preference number: 2 (lower is better)
Translates to: RPSSQARQPGLELPRGGSQAFPT*LARWPT
Trigger: GGTGGGCCATCTCGCCAGGCACGTAGGAAAGGCCTG...CGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCGCCCACCCAAGAGCCTaGCGGAGCAGCGGGTTGAGG +
Preference number: 2 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISAHPRA*RSSGLR
Trigger: CCTCAACCCGCTGCTCCGCCAGGCTCTTGGGTGGGC...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCGGCACTGTGTCTGGTTaGTTGTGGCCTGGGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISGTVSG*LWPGPP
Trigger: AGGAGGCCCAGGCCACAACCAACCAGACACAGTGCC...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCATTGGCACTGTGTCTaGTTGGTTGTGGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISHWHCV*LVVAWA
Trigger: GGCCCAGGCCACAACCAACCAGACACAGTGCCAATG...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp CCCTGGGCAAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTCCTCCCTGGCCCAGCTaGTCCCAGGCCTTTCCTACG +
Preference number: 2 (lower is better)
Translates to: PWARLVVVTVLRLLCGKGPPWPS*SQAFPT
Trigger: CGTAGGAAAGGCCTGGGACCAGCTGGGCCAGGGAGG...ACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTTGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTCCCATGCGCCTGTGTTaGAGCACAATGGCTAAGAAT +
Preference number: 2 (lower is better)
Translates to: PAKHWGRHPAWHWLMGTSPMRLC*STMAKN
Trigger: ATTCTTAGCCATTGTGCTCCAACACAGGCGCATGGG...AGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGCCTTTCCTACGTGCCTaGCGAGATGGCCCACCCAAG +
Preference number: 2 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVPFLRA*RDGPPK
Trigger: CTTGGGTGGGCCATCTCGCCAGGCACGTAGGAAAGG...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR GCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGGTGGGTCTGTGCCTGTaGACAGGTATCTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVVGLCL*TGICWL
Trigger: CAGCCAGCAGATACCTGTGCACAGGCACAGACCCAC...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR GCA 90 bp CCCTGGGCAAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTAGTGTGGCCATCCCATaGGCCTGTGTTGGAGCACAA +
Preference number: 2 (lower is better)
Translates to: PWARLVVVTVLRLLCGKGSVAIP*ACVGAQ
Trigger: TTGTGCTCCAACACAGGCGCATGGGATGGCCACACT...ACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTTGCCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR GCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCACCCTCCAGTTCACATaGATGTGTCCATATCATGCT +
Preference number: 2 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISTLQFT*MCPYHA
Trigger: AGCATGATATGGACACATGCATGTGAACTGGAGGGT...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGACGTGCCTGGCGAGATaGCCCACCCAAGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGTCLAR*PTQEPG
Trigger: GCCAGGCTCTTGGGTGGGCCATCTCGCCAGGCACGT...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR GCA 90 bp CCCTGGGCAAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCAAAATGGCTTTGTaGGGTGTTGAAGTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PWARLVVVTVLRLLCGKGGKMAL*GVEVSP
Trigger: TGGGGACACTTCAACACCGCACAAAGCCATTTTGCC...ACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTTGCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR GCA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGGAGTTGGTGGGTCTGTaGCTGTGCACAGGTATCTGC +
Preference number: 2 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGELVGL*LCTGIC
Trigger: GCAGATACCTGTGCACAGGCACAGACCCACCAACTC...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp ACCCTCCAGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTGGTGTGTAGTGTCCCCACGAGTTGGTaGGTCTGTGCCTGTGCACAG +
Preference number: 2 (lower is better)
Translates to: TLQFTCMCPYHACALVCSVPTSW*VCACAQ
Trigger: CTGTGCACAGGCACAGACCCACCAACTCGTGGGGAC...ACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp ACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGAGTGTCCCCACGAGTTaGTGGGTCTGTGCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: TMAKNECIMGGGYPAAVLSVPTS*WVCACA
Trigger: TGCACAGGCACAGACCCACCAACTCGTGGGGACACT...CAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp CCCTGGGCAAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTATCATGCTTGTGCCTTaGTGTGTAGTGCACATCTCC +
Preference number: 2 (lower is better)
Translates to: PWARLVVVTVLRLLCGKGIMLVP*CVVHIS
Trigger: GGAGATGTGCACTACACACCAAGGCACAAGCATGAT...ACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTTGCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGGGTCTAGTGGCAAAATaGCTTTGTGCGGTGTTGAAG +
Preference number: 2 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGGLVAK*LCAVLK
Trigger: CTTCAACACCGCACAAAGCCATTTTGCCACTAGACC...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp AACAGCCCCAAATGCTGGCTGCCCCCAGCCAAGCATTaGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGC +
Preference number: 3 (lower is better)
Translates to: NSPKCWLPPAKH*GRHPAWHWLMG
Trigger: GCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAGCCAGCATTTGGGGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp CTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTaGCACTGGCTGATGGGCACCTCTGTTGGTTCCATC +
Preference number: 3 (lower is better)
Translates to: LPPAKHWGRHPA*HWLMGTSVGSI
Trigger: GATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR GCA 72 bp GATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTaGCAAAGGCCCCGCAGTCCCTCTCCCAGGAGGACC +
Preference number: 3 (lower is better)
Translates to: DGHLCWFHQPEL*QRPRSPSPRRT
Trigger: GGTCCTCCTGGGAGAGGGACTGCGGGGCCTTTGGCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTaGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAG +
Preference number: 3 (lower is better)
Translates to: PAKHWGRHPAWH*LMGTSVGSISQ
Trigger: CTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR TCA 72 bp CCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTaGTGGGCACCTCTGTTGGTTCCATCAGCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: PSIGAAILPGTG*WAPLLVPSARA
Trigger: AGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CAA 90 bp TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATTGGCTTTGTGCGGTGTaGAAGTGTCCCCACGAGTTG +
Preference number: 3 (lower is better)
Translates to: LGPPSCLALADGHLCWFHWLCAV*KCPHEL
Trigger: CAACTCGTGGGGACACTTCAACACCGCACAAAGCCA...ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CAA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCTATCATGCTTGTGCCTaGGTGTGTAGTGCACATCTC +
Preference number: 3 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISYHACA*VCSAHL
Trigger: GAGATGTGCACTACACACCAAGGCACAAGCATGATA...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR TCA 72 bp GCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTaGGTGTGGCCATCCCATGCGCCTGTGTTGGAGCAC +
Preference number: 3 (lower is better)
Translates to: ALVCSAHLHACQ*VWPSHAPVLEH
Trigger: GTGCTCCAACACAGGCGCATGGGATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR GCA 72 bp TTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTaGACAGGTATCTGCTGGCTGCACACATACACAGTG +
Preference number: 3 (lower is better)
Translates to: LKCPHELVGLCL*TGICWLHTYTV
Trigger: CACTGTGTATGTGTGCAGCCAGCAGATACCTGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR GCA 72 bp CTGGAGATGTCTGGGTGGGCCACCCTCCAGTTCACATaGATGTGTCCATATCATGCTTGTGCCTTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: LEMSGWATLQFT*MCPYHACALVC
Trigger: ACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGTGGCCCACCCAGACATCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp ATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTaGGGGCATGGGTCTAGTGGCAAAATGGCTTTGTGC +
Preference number: 3 (lower is better)
Translates to: MGGGYPAAVLLI*GHGSSGKMALC
Trigger: GCACAAAGCCATTTTGCCACTAGACCCATGCCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp AGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTaGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTG +
Preference number: 3 (lower is better)
Translates to: SCDCAETALWEG*LSCSLVTVTSV
Trigger: CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp CCTGTCAGTGAGTGTGGCCATCCCATGCGCCTGTGTTaGAGCACAATGGCTAAGAATGAGTGTATCATGGGA +
Preference number: 3 (lower is better)
Translates to: PVSECGHPMRLC*STMAKNECIMG
Trigger: TCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAGGCGCATGGGATGGCCACACTCACTGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp AAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTaGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTC +
Preference number: 3 (lower is better)
Translates to: KVGSCDCAETAL*EGWLSCSLVTV
Trigger: GACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR-3UTR CAA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATAGTGGCAAAATGGCTTaGTGCGGTGTTGAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: LVPWCVVHISMPVSECGHSGKMA*CGVEVS
Trigger: GGACACTTCAACACCGCACAAAGCCATTTTGCCACT...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTaGAGATGTCTGGGTGGGCCACCCTCCAGTTCACAT +
Preference number: 3 (lower is better)
Translates to: SDTQIPVWTSGF*RCLGGPPSSSH
Trigger: ATGTGAACTGGAGGGTGGCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CCA 72 bp AGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTaGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAG +
Preference number: 3 (lower is better)
Translates to: SSHACVHIMLVP*CVVHISMPVSE
Trigger: CTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACGCCTTGTGCATCAGCTaGCTGCCCACCACACGGCCC +
Preference number: 4 (lower is better)
Translates to: PAARPASRGSSYQGAGRHALCIS*LPTTRP
Trigger: GGGCCGTGTGGTGGGCAGGCAGCTGATGCACAAGGC...GTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp AGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGGCCGCCATCCTGCCTaGCACTGGCTGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: RPSSQARQPGLELPRGGSGRHPA*HWLMGT
Trigger: GGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC...CGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp GCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACCGCAGTCATCCTGGAGCCTaGGTGCTCCTCCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: AARPASRGSSYQGAGRHRSHPGA*VLLHPV
Trigger: GACAGGGTGGAGGAGCACCCAGGCTCCAGGATGACT...GCGGTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACAGCAACAGCCCCAAATaGTGGCTGCCCCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PAARPASRGSSYQGAGRHSNSPK*WLPPAK
Trigger: CTTGGCTGGGGGCAGCCAGCATTTGGGGCTGTTGCT...GTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp GCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACCGCGGCACTGGTGTCACTTaGGTGTCACCCTCTACCACC +
Preference number: 4 (lower is better)
Translates to: AARPASRGSSYQGAGRHRGTGVT*VSPSTT
Trigger: GGTGGTAGAGGGTGACACCCAAGTGACACCAGTGCC...GCGGTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp GACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGACAAGGCCTGCAGCCTaGAGCGTGAGTGTATCGTCC +
Preference number: 4 (lower is better)
Translates to: DPAARPASRGSSYQGAGRTRPAA*SVSVSS
Trigger: GGACGATACACTCACGCTGCAGGCTGCAGGCCTTGT...CCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACGCTGAGACTGCTCTGTaGGAAGGGTGGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PAARPASRGSSYQGAGRHAETAL*EGWLSC
Trigger: ACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGC...GTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp GACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCTCGCACGTCCCCAATaGTGTTGTCAGGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: DPAARPASRGSSYQGAGRLARPQ*CCQAAS
Trigger: TGATGCAGCCTGACAACACCATTGGGGACGTGCGAG...CCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp GACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCTTCATCTCCATAGATaGGGATTCCTCGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DPAARPASRGSSYQGAGRLHLHR*GFLASQ
Trigger: CTGGGAGGCGAGGAATCCGCATCTATGGAGATGAAG...CCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATGAGGGTACGCAGCCGTaGCCCGCCGGGCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: LGPPSCLALADGHLCWFHEGTQP*PAGHWC
Trigger: ACACCAGTGCCCGGCGGGGCACGGCTGCGTACCCTC...ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp GCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACCGCCTGTGCACAGGTATCTaGTGGCTGCACACATACACA +
Preference number: 4 (lower is better)
Translates to: AARPASRGSSYQGAGRHRLCTGI*WLHTYT
Trigger: TGTGTATGTGTGCAGCCAGCAGATACCTGTGCACAG...GCGGTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CCCAGCTGGTCCCAGGCCTTTCCTACGTGCCTGGCGAGATGGCCCACCCAAGAGCACACGGCCCTCGCCTaGGAAGGGGTCCAGTCCATC +
Preference number: 4 (lower is better)
Translates to: PSWSQAFPTCLARWPTQEHTALA*EGVQSI
Trigger: GATGGACTGGACCCCTTCCCAGGCGAGGGCCGTGTG...CTCTTGGGTGGGCCATCTCGCCAGGCACGTAGGAAAGGCCTGGGACCAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp AGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGTGGACCAGTGGTTTCTaGAGATGTCTGGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPSSQARQPGLELPRGGSWTSGF*RCLGGP
Trigger: TGGCCCACCCAGACATCTCCAGAAACCACTGGTCCA...CGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTAGGCAGAGGCATCCATaGCCCTGGCCTGCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: PAKHWGRHPAWHWLMGTSRQRHP*PWPALA
Trigger: TGCTAGCGCAGGCCAGGGTCATGGATGCCTCTGCCT...AGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCTGTGCATCAGCTGCCTaGCCACCACACGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISCASAA*PPHGPR
Trigger: GCGAGGGCCGTGTGGTGGGCAGGCAGCTGATGCACA...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTTGCCCGCAGCAGCAGTaGTGCTTTGGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: PAKHWGRHPAWHWLMGTSCPQQQ*CFGHKA
Trigger: GGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCA...AGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCTGCCTGGCACTGGCTaGTGGGCACCTCTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISLPGTG*WAPLLV
Trigger: AACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAG...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTAGCTCACTAAGATCCTaGAGGCTGGCCAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PAKHWGRHPAWHWLMGTSSSLRS*RLASSL
Trigger: CAGGCTGCTGGCCAGCCTGCAGGATCTTAGTGAGCT...AGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCGTGTTGGGTGACTCCTaGCTCCTCTCTCGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISVLGDS*LLSRSA
Trigger: CGCTGAGCGAGAGAGGAGCCAGGAGTCACCCAACAC...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CCCAGCTGGTCCCAGGCCTTTCCTACGTGCCTGGCGAGATGGCCCACCCAAGAGCATCCTGCCTGGCACTaGCTGATGGGCACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSWSQAFPTCLARWPTQEHPAWH*LMGTSV
Trigger: AACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATG...CTCTTGGGTGGGCCATCTCGCCAGGCACGTAGGAAAGGCCTGGGACCAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGCTTCGGGGCTCGGCGTaGCCGCAGCAGCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVLRGSA*PQQQCC
Trigger: GCAGCACTGCTGCTGCGGGCACGCCGAGCCCCGAAG...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCCTTTCCTACGTGCCTaGCGAGATGGCCCACCCAAG +
Preference number: 4 (lower is better)
Translates to: LGPPSCLALADGHLCWFHPFLRA*RDGPPK
Trigger: CTTGGGTGGGCCATCTCGCCAGGCACGTAGGAAAGG...ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATGGCACTGTGTCTGGTTaGTTGTGGCCTGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGPPSCLALADGHLCWFHGTVSG*LWPGPP
Trigger: AGGAGGCCCAGGCCACAACCAACCAGACACAGTGCC...ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp GAACCTAGAAGACAAAGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTATCACAGGGGCACCTATaGCGCCATAGCAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EPRRQRPSSQARQPGLELSQGHL*RHSRKG
Trigger: TCCCTTCCTGCTATGGCGGCATAGGTGCCCCTGTGA...TAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCTTTGTCTTCTAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp GAACCTAGAAGACAAAGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTAGTGGGTCTGTGCCTGTaGACAGGTATCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EPRRQRPSSQARQPGLELVGLCL*TGICWL
Trigger: CAGCCAGCAGATACCTGTGCACAGGCACAGACCCAC...TAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCTTTGTCTTCTAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTTTGTGCGGTGTTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTGCACAACGTGCCTGGCGAGATaGCCCACCCAAGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCAVLKCPHELVGLCLCTTCLAR*PTQEPG
Trigger: GCCAGGCTCTTGGGTGGGCCATCTCGCCAGGCACGT...TGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGCAGTTCTGCTAATTTaGGGGCATGGGTCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: PAKHWGRHPAWHWLMGTSAVLLI*GHGSSG
Trigger: GCCACTAGACCCATGCCCCCAAATTAGCAGAACTGC...AGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp GAACCTAGAAGACAAAGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTAGCCCGTCGAACATCATaGTGCCATTCCGGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: EPRRQRPSSQARQPGLELARRTS*CHSGRA
Trigger: AGCTCTACCGGAATGGCATCATGATGTTCGACGGGC...TAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCTTTGTCTTCTAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CTTTGTGCGGTGTTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTGCACAGCCCCAAATGCTGGCTaGCCCCAGCCAAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: LCAVLKCPHELVGLCLCTAPNAG*PQPSIG
Trigger: CCCAATGCTTGGCTGGGGGCAGCCAGCATTTGGGGC...TGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGGGGGTGCCGGCGTGTTaGGTGACTCCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVGVPAC*VTPGSS
Trigger: AGAGGAGCCAGGAGTCACCCAACACGCCGGCACCCC...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGGTCCAGGACAGGGACTaGGGCCGGGACCGGGACCGG +
Preference number: 4 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGVQDRD*GRDRDR
Trigger: CCGGTCCCGGTCCCGGCCCCAGTCCCTGTCCTGGAC...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATCTCAGGGGGCGCCAATaGGTCCCCTTGCCGACTCAC +
Preference number: 4 (lower is better)
Translates to: LVPWCVVHISMPVSECGHLRGRQ*VPLPTH
Trigger: GTGAGTCGGCAAGGGGACTCATTGGCGCCCCCTGAG...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGTCCATGACCCTGGCCTaGGCTAGCAGAGCTCGCACG +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVSMTLA*ASRART
Trigger: CGTGCGAGCTCTGCTAGCGCAGGCCAGGGTCATGGA...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCGCCCACCCAAGAGCCTaGCGGAGCAGCGGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGAHPRA*RSSGLR
Trigger: CCTCAACCCGCTGCTCCGCCAGGCTCTTGGGTGGGC...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp CTTTGTGCGGTGTTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTGCACACCCCATTCTCAGACTTaGTGCGCAGCATGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LCAVLKCPHELVGLCLCTPHSQT*CAAWRA
Trigger: CGCTCTCCATGCTGCGCATCAAGTCTGAGAATGGGG...TGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGCTGTCCAAGGCCTTGTaGATCAGCTGCCTGCCCACC +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVLSKAL*ISCLPT
Trigger: GGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAG...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATGGGCGGGTGCTTTATTaGGGGCTGGGACTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LVPWCVVHISMPVSECGHGRVLY*GLGLGP
Trigger: TGGACCCAGTCCCAGCCCCCAATAAAGCACCCGCCC...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGTGCCGGCGTGTTGGGTaGCTCCTGGCTCCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGCRRVG*LLAPLS
Trigger: CGAGAGAGGAGCCAGGAGTCACCCAACACGCCGGCA...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp CTTTGTGCGGTGTTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTGCACATGGGCGGGAATGTGCTaGAGATCTCAAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCAVLKCPHELVGLCLCTWAGMC*RSQRQR
Trigger: CCTCTGCCTTTGAGATCTTCAGCACATTCCCGCCCA...TGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp ACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGTGCCCCGCCGGGCACTaGTGTCACTTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: TMAKNECIMGGGYPAAVLCPAGH*CHLGVT
Trigger: GGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCA...CAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCAGAGCTTCAGCGGGATaGGCTCGAGGGTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGRASAG*ARGYAA
Trigger: GGCTGCGTACCCTCGAGCCCATCCCGCTGAAGCTCT...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGTCCACCACAATCTCCTaGATCCGGGCAGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: CDCAETALWEGWLSCSLVSTTIS*IRAGNG
Trigger: CCCATTGCCTGCCCGGATCCAGGAGATTGTGGTGGA...CACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGAGTGTCCCCACGAGTTaGTGGGTCTGTGCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CDCAETALWEGWLSCSLVSVPTS*WVCACA
Trigger: TGCACAGGCACAGACCCACCAACTCGTGGGGACACT...CACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGTGTTGGAGCACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCATGGTTGGTTGTGGCCTaGGCCTCCTGGGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCWSTMAKNECIMGGGYPWLVVA*ASWVPA
Trigger: GGCAGGGACCCAGGAGGCCCAGGCCACAACCAACCA...TGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp ACCCTCCAGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTGGTGTGTAGTCCCCCAGCCAAGCATTaGGGCCGCCATCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLQFTCMCPYHACALVCSPPAKH*GRHPAW
Trigger: CCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGG...ACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
3UTR CAA 72 bp GGCATGGGTCTAGTGGCAAAATGGCTTTGTGCGGTGTaGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GMGLVAKWLCAV*KCPHELVGLCL
Trigger: CAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACAAAGCCATTTTGCCACTAGACCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCGCCAATGAGTCCCCTTaGCGACTCACAGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGANESP*RLTGAP
Trigger: AGGTGCCCCTGTGAGTCGGCAAGGGGACTCATTGGC...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGGAGTTGGTGGGTCTGTaGCTGTGCACAGGTATCTGC +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVELVGL*LCTGIC
Trigger: GCAGATACCTGTGCACAGGCACAGACCCACCAACTC...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATGATCCGGGCAGGCAATaGGCAGCAGTTCTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LVPWCVVHISMPVSECGHDPGRQ*AAVLQG
Trigger: ACCTTGCAGAACTGCTGCCCATTGCCTGCCCGGATC...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGGCTCAGCGGCCAAGGTaGGCGTCTCCACCACAATCT +
Preference number: 4 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGAQRPR*ASPPQS
Trigger: AGATTGTGGTGGAGACGCCCACCTTGGCCGCTGAGC...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATCTGGAGATGTCTGGGTaGGCCACCCTCCAGTTCACA +
Preference number: 4 (lower is better)
Translates to: LVPWCVVHISMPVSECGHLEMSG*ATLQFT
Trigger: TGTGAACTGGAGGGTGGCCCACCCAGACATCTCCAG...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGGTGTCTGGTTGGTTGTaGCCTGGGCCTCCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGVSGWL*PGPPGS
Trigger: GGACCCAGGAGGCCCAGGCCACAACCAACCAGACAC...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp CTGTGTTGGAGCACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCATCTGCAAGGTGTCCCTaGTGGGGCCCCGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: LCWSTMAKNECIMGGGYPSARCP*WGPGCQ
Trigger: TTGACATCCGGGGCCCCATCAGGGACACCTTGCAGA...TGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGCTGCAGCCTGCAGCGTaGGTGTATCGTCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGLQPAA*VYRPGR
Trigger: TCTACCAGGACGATACACTCACGCTGCAGGCTGCAG...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp CTGTGTTGGAGCACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCACTCCATGCCTGTCAGTaGGTGTGGCCATCCCATGCG +
Preference number: 4 (lower is better)
Translates to: LCWSTMAKNECIMGGGYPLHACQ*VWPSHA
Trigger: CGCATGGGATGGCCACACTCACTGACAGGCATGGAG...TGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp GAACCTAGAAGACAAAGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACTAGAGGCAATTAAATaGTGTCCTGTTCCATTGGCA +
Preference number: 4 (lower is better)
Translates to: EPRRQRPSSQARQPGLELLEAIK*CPVPLA
Trigger: TGCCAATGGAACAGGACATCATTTAATTGCCTCTAG...TAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCTTTGTCTTCTAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATAATGGGCAGCAGTTCTaGAAGGTGTCCCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LVPWCVVHISMPVSECGHNGQQF*KVSLMG
Trigger: CCCCATCAGGGACACCTTGCAGAACTGCTGCCCATT...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACCCTCCAGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTGGTGTGTAGTCATCAGCCAGAGCTCTaGCAAAGGCCCCGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TLQFTCMCPYHACALVCSHQPEL*QRPRSP
Trigger: GGGACTGCGGGGCCTTTGGCAGAGCTCTGGCTGATG...ACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp ACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGGGAGGCAGCGCTGTGTaGAGGGATCGTAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TMAKNECIMGGGYPAAVLGGSAV*RDRRRA
Trigger: AGCCCTTCTACGATCCCTCCACACAGCGCTGCCTCC...CAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGCATTGGCACTGTGTCTaGTTGGTTGTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGHWHCV*LVVAWA
Trigger: GGCCCAGGCCACAACCAACCAGACACAGTGCCAATG...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CTTGTGCCTTGGTGTGTAGTGCACATCTCCATGCCTGTCAGTGAGTGTGGCCATTCAATCACCTCGCCTTaGCGGATCACAAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LVPWCVVHISMPVSECGHSITSP*RITNLG
Trigger: CCCCAAGTTTGTGATCCGGCAAGGCGAGGTGATTGA...ATGGCCACACTCACTGACAGGCATGGAGATGTGCACTACACACCAAGGCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGTGTTGGAGCACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCATGCTTTATTGGGGGCTaGGACTGGGTCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LCWSTMAKNECIMGGGYPCFIGG*DWVQDR
Trigger: CCTGTCCTGGACCCAGTCCCAGCCCCCAATAAAGCA...TGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACCTGTATGGACCAGTaGTTTCTGGAGATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CDCAETALWEGWLSCSLVTCMDQ*FLEMSG
Trigger: CCCAGACATCTCCAGAAACCACTGGTCCATACAGGT...CACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCGTTAGTGCATGTGTTTaGATATGTCTGACACACAAA +
Preference number: 4 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISVSACV*ICLTHK
Trigger: TTTGTGTGTCAGACATATCCAAACACATGCACTAAC...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGGATGGGCACCTCTGTTaGTTCCATCAGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGDGHLC*FHQPEL
Trigger: GAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATC...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGAAGGGAGGCCAAAGGTaGGCTCATAGTTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVKGGQR*AHSSTS
Trigger: AGAAGTAGAACTATGAGCTCACCTTTGGCCTCCCTT...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR TCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCAGTCGCTGGAGCTCTaGGGGAAAGAAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGQSLEL*GKEAIQ
Trigger: TTGGATGGCTTCTTTCCCTCAGAGCTCCAGCGACTG...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCAGGTGGGTACCCAGCTaGAGTTCTGCTAATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGRWVPS*SSANLG
Trigger: CCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCT...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp TCTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGAGTGTGGCCATCCCATaGGCCTGTGTTGGAGCACAA +
Preference number: 4 (lower is better)
Translates to: SDTQIPVWTSGFWRCLGGSVAIP*ACVGAQ
Trigger: TTGTGCTCCAACACAGGCGCATGGGATGGCCACACT...CCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCTTGGGGTACAGTCGCTaGAGCTCTGAGGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGLGYSR*SSEGKK
Trigger: CTTCTTTCCCTCAGAGCTCCAGCGACTGTACCCCAA...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp ACCCTCCAGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTGGTGTGTAGTTCTCAGCAGTCATCCTaGAGCCTGGGTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TLQFTCMCPYHACALVCSSQQSS*SLGAPP
Trigger: TGGAGGAGCACCCAGGCTCCAGGATGACTGCTGAGA...ACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp ACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGACTGTCACCTCTGTGGCCGGATCACAAACTTaGGGAGCCTGTTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: TALWEGWLSCSLVTVTSVAGSQT*GACSEI
Trigger: AATTTCTGAACAGGCTCCCCAAGTTTGTGATCCGGC...CACAGAGGTGACAGTCACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGATCATGCTTGTGCCTTaGTGTGTAGTGCACATCTCC +
Preference number: 4 (lower is better)
Translates to: CDCAETALWEGWLSCSLVIMLVP*CVVHIS
Trigger: GGAGATGTGCACTACACACCAAGGCACAAGCATGAT...CACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGTGTTGGAGCACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGTTTCTGGAGATGTCTaGGTGGGCCACCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LCWSTMAKNECIMGGGYPVSGDV*VGHPPV
Trigger: AACTGGAGGGTGGCCCACCCAGACATCTCCAGAAAC...TGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGTGCTCCAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp TGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGGATGTCCTGTTCCATTaGCACTGTGTCTGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: CDCAETALWEGWLSCSLVDVLFH*HCVWLV
Trigger: AACCAACCAGACACAGTGCCAATGGAACAGGACATC...CACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCGGCAAAATGGCTTTGTaGGGTGTTGAAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGGKMAL*GVEVSP
Trigger: TGGGGACACTTCAACACCGCACAAAGCCATTTTGCC...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCAGAATGAGTGTATCATaGGAGGTGGGTACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGRMSVS*EVGTQL
Trigger: CAGCTGGGTACCCACCTCCCATGATACACTCATTCT...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCCCCATGCGCCTGTGTTaGAGCACAATGGCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGPMRLC*STMAKN
Trigger: ATTCTTAGCCATTGTGCTCCAACACAGGCGCATGGG...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGGGTCTAGTGGCAAAATaGCTTTGTGCGGTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGGLVAK*LCAVLK
Trigger: CTTCAACACCGCACAAAGCCATTTTGCCACTAGACC...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CCA 90 bp CCCTGGGCAAGGTTGGTAGTTGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTTGTGTTGGAGCACAATaGCTAAGAATGAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: PWARLVVVTVLRLLCGKGCVGAQ*LRMSVS
Trigger: TGATACACTCATTCTTAGCCATTGTGCTCCAACACA...ACCCTTCCCACAGAGCAGTCTCAGCACAGTCACAACTACCAACCTTGCCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACCCTCCAGTTCACATGCATGTGTCCATATCATGCTTGTGCCTTGGTGTGTAGTATGGTGTTGTCAGGCTaGATCATCAGTAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TLQFTCMCPYHACALVCSMVLSG*IISRKA
Trigger: GGCCTTCCTACTGATGATGCAGCCTGACAACACCAT...ACTACACACCAAGGCACAAGCATGATATGGACACATGCATGTGAACTGGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR GCA 90 bp ACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGACCCTCCAGTTCACATaGATGTGTCCATATCATGCT +
Preference number: 4 (lower is better)
Translates to: TMAKNECIMGGGYPAAVLTLQFT*MCPYHA
Trigger: AGCATGATATGGACACATGCATGTGAACTGGAGGGT...CAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS CCA 90 bp GGCGGGTGCTTTATTGGGGGCTGGGACTGGGTCCAGGACAGGGACTaGGGCCGGGACCGGGACCGGGACTGGGGCCGGGACCGGGACCGG +
Preference number: 5 (lower is better)
Translates to: GGCFIGGWDWVQDRD*GRDRDRDWGRDRDR
Trigger: CCGGTCCCGGTCCCGGCCCCAGTCCCGGTCCCGGTCCCGGCCCCAGTCCCTGTCCTGGACCCAGTCCCAGCCCCCAATAAAGCACCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
CDS-3UTR CAA 90 bp CCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGCACGGGGCGGGTGCTTTATaGGGGGCTGGGACTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PAARPASRGSSYQGAGRHGAGAL*GAGTGS
Trigger: GGACCCAGTCCCAGCCCCCAATAAAGCACCCGCCCC...GTGCCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CAA 90 bp GACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGGTGGCGGAGCAGCGGGTaGAGGGGGCGGGTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: DPAARPASRGSSYQGAGRWRSSG*RGRVLY
Trigger: ATAAAGCACCCGCCCCCTCAACCCGCTGCTCCGCCA...CCGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CAA 90 bp AGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGTGGCACTGTGTCTGGTaGGTTGTGGCCTGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RPSSQARQPGLELPRGGSWHCVW*VVAWAS
Trigger: GGAGGCCCAGGCCACAACCAACCAGACACAGTGCCA...CGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS CCA 90 bp GCCTCCACGCGTAGTCATGGTAAGCAGGGTCTTGAACCTCTCCTGTaGGAGCCGCGGAGCTCGCAGGCCCTCGGGGCTCGGGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ASTRSHGKQGLEPLL*EPRSSQALGARAPA
Trigger: GGCTGGAGCCCGAGCCCCGAGGGCCTGCGAGCTCCGCGGCTCCCACAGGAGAGGTTCAAGACCCTGCTTACCATGACTACGCGTGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS CCA 90 bp TTCACACCTCCTCGGCCTCTCCGTCATCCCCAGAGCCCAGAGCTCTaGCGGGGACACGGTCCGGCCCGCTGCCAGGACTCCCTAATGCCC +
Preference number: 5 (lower is better)
Translates to: FTPPRPLRHPQSPEL*RGHGPARCQDSLMP
Trigger: GGGCATTAGGGAGTCCTGGCAGCGGGCCGGACCGTGTCCCCGCCAGAGCTCTGGGCTCTGGGGATGACGGAGAGGCCGAGGAGGTGTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS GCA 90 bp GAGCCTGGGTGCTCCTCCACCCTGTCCAAGGCCTTGTGCATCAGCTaGCTGCCCACCACACGGCCCTCGCCTGGGAAGGGGTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: EPGCSSTLSKALCIS*LPTTRPSPGKGSSP
Trigger: TGGACTGGACCCCTTCCCAGGCGAGGGCCGTGTGGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGTGGAGGAGCACCCAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
CDS GCA 90 bp GGCTCGGCGTGCCCGCAGCAGCAGTGCTGCTTTGGGCACAAGGCCTaGAGCCTGCAGCGTGAGTGTATCGTCCTGGTAGAGGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: GSACPQQQCCFGHKA*SLQRECIVLVEGGR
Trigger: CCGCCCACCCTCTACCAGGACGATACACTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCACGCCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 90 bp CTGACCTGCCGCTGCAGCTGCACACACATCGTCTCCAGTTCCTCCTaGCGCTGCAGGGTTGCCTCGGCTGGGTGTGGCCGGAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LTCRCSCTHIVSSSS*RCRVASAGCGRRVC
Trigger: GCAGACCCTCCGGCCACACCCAGCCGAGGCAACCCTGCAGCGGCAGGAGGAACTGGAGACGATGTGTGTGCAGCTGCAGCGGCAGGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000496466.1
CDS CCA 90 bp CCAGGCCTTTCCTACGTGCCTGGCGAGATGGCCCACCCAAGAGCCTaGCGGAGCAGCGGGTTGAGGGGGCGGGTGCTTTATTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PGLSYVPGEMAHPRA*RSSGLRGRVLYWGL
Trigger: CAGCCCCCAATAAAGCACCCGCCCCCTCAACCCGCTGCTCCGCCAGGCTCTTGGGTGGGCCATCTCGCCAGGCACGTAGGAAAGGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS CCA 90 bp GGGCCTCTCCGCTCCCTTCCCAGCCCGGCTTCAGACTTATCCTCCTaGAGGGCATCAGACTGGGGTCCCCCAGGGAGTGCAGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: GPLRSLPSPASDLSS*RASDWGPPGSAAAS
Trigger: GGAAGCCGCTGCACTCCCTGGGGGACCCCAGTCTGATGCCCTCCAGGAGGATAAGTCTGAAGCCGGGCTGGGAAGGGAGCGGAGAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS-3UTR CAA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCGGGGGTGCCGGCGTGTaGGGTGACTCCTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISGGAGV*GDSWLL
Trigger: GAGGAGCCAGGAGTCACCCAACACGCCGGCACCCCC...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp CTGGGTGCTCCTCCACCCTGTCCAAGGCCTTGTGCATCAGCTGCCTaGCCACCACACGGCCCTCGCCTGGGAAGGGGTCCAGTCCATCCT +
Preference number: 5 (lower is better)
Translates to: LGAPPPCPRPCASAA*PPHGPRLGRGPVHP
Trigger: AGGATGGACTGGACCCCTTCCCAGGCGAGGGCCGTGTGGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGTGGAGGAGCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 90 bp GGGCCTGGCCGCCCAGCCTTCCAGCTCTTCTGGCTGGGGCTGCACTaGTTGCGGGCTGCCCTGAGAGAAACCTGTATCCACAGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GPGRPAFQLFWLGLH*LRAALRETCIHSWG
Trigger: TCCCCAGCTGTGGATACAGGTTTCTCTCAGGGCAGCCCGCAAGCAGTGCAGCCCCAGCCAGAAGAGCTGGAAGGCTGGGCGGCCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374222.5
CDS GCA 90 bp AGGACTGGGTGCTCCTCCACCCTGTCCAAGGCCTTGTGCATCAGCTaGCTGCCCACCACACGGCCCTCGCCTGGGAAGGGGTCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: RTGCSSTLSKALCIS*LPTTRPSPGKGSSP
Trigger: TGGACTGGACCCCTTCCCAGGCGAGGGCCGTGTGGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGTGGAGGAGCACCCAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496466.1
CDS GCA 90 bp ATTCCGGTAGAGCTTCAGCGGGATGGGCTCGAGGGTACGCAGCCGTaGCCCGCCGGGCACTGGTGTCACTTGGGTGTCACCCTCTACCAC +
Preference number: 5 (lower is better)
Translates to: IPVELQRDGLEGTQP*PAGHWCHLGVTLYH
Trigger: GTGGTAGAGGGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCACGGCTGCGTACCCTCGAGCCCATCCCGCTGAAGCTCTACCGGAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp CAGCGGGATGGGCTCGAGGGTACGCAGCCGTGCCCCGCCGGGCACTaGTGTCACTTGGGTGTCACCCTCTACCACCAGCTCACTAAGATC +
Preference number: 5 (lower is better)
Translates to: QRDGLEGTQPCPAGH*CHLGVTLYHQLTKI
Trigger: GATCTTAGTGAGCTGGTGGTAGAGGGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCACGGCTGCGTACCCTCGAGCCCATCCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS-3UTR CAA 90 bp AGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGACGTCCCCAATGGTGTaGTCAGGCTGCATCATCAGT +
Preference number: 5 (lower is better)
Translates to: RPSSQARQPGLELPRGGSTSPMV*SGCIIS
Trigger: ACTGATGATGCAGCCTGACAACACCATTGGGGACGT...CGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp TTTCAGGCTGGACTTCGGGGCTCGGCGTGCCCGCAGCAGCAGTGCTaGTTTGGGCACAAGGCCTGCAGCCTGCAGCGTGAGTGTATCGTC +
Preference number: 5 (lower is better)
Translates to: FQAGLRGSACPQQQC*FGHKACSLQRECIV
Trigger: GACGATACACTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCACGCCGAGCCCCGAAGTCCAGCCTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp CTTCCCAGCCCGGCTTCAGACTTATCCTCCTGGAGGGCATCAGACTaGGGTCCCCCAGGGAGTGCAGCGGCTTCCCCTCAGAATGGGAGG +
Preference number: 5 (lower is better)
Translates to: LPSPASDLSSWRASD*GPPGSAAASPQNGR
Trigger: CCTCCCATTCTGAGGGGAAGCCGCTGCACTCCCTGGGGGACCCCAGTCTGATGCCCTCCAGGAGGATAAGTCTGAAGCCGGGCTGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS-3UTR CAA 90 bp AGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTACCAAGGGGCGGGTCGAGTGGCAAAATGGCTTaGTGCGGTGTTGAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: RPSSQARQPGLELPRGGSSGKMA*CGVEVS
Trigger: GGACACTTCAACACCGCACAAAGCCATTTTGCCACT...CGACCCGCCCCTTGGTAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp GAATTTCAGGCTGGACTTCGGGGCTCGGCGTGCCCGCAGCAGCAGTaGTGCTTTGGGCACAAGGCCTGCAGCCTGCAGCGTGAGTGTATC +
Preference number: 5 (lower is better)
Translates to: EFQAGLRGSACPQQQ*CFGHKACSLQRECI
Trigger: GATACACTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCACGCCGAGCCCCGAAGTCCAGCCTGAAATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp CTCTCTCGCTCAGCGGCCAAGGTGGGCGTCTCCACCACAATCTCCTaGATCCGGGCAGGCAATGGGCAGCAGTTCTGCAAGGTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSRSAAKVGVSTTIS*IRAGNGQQFCKVSL
Trigger: CAGGGACACCTTGCAGAACTGCTGCCCATTGCCTGCCCGGATCCAGGAGATTGTGGTGGAGACGCCCACCTTGGCCGCTGAGCGAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp AGGACGCGCTCAGGGAGCGACGTCTATCACGATCTAACCCAGCCCTaGAGGCCGTGTCGCCTCCTTCCGCCTCCACGCGTAGTCATGGTA +
Preference number: 5 (lower is better)
Translates to: RTRSGSDVYHDLTQP*RPCRLLPPPRVVMV
Trigger: TACCATGACTACGCGTGGAGGCGGAAGGAGGCGACACGGCCTCCAGGGCTGGGTTAGATCGTGATAGACGTCGCTCCCTGAGCGCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS-3UTR CAA 90 bp GAACCTAGAAGACAAAGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTAACCCTGTCCAAGGCCTaGTGCATCAGCTGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: EPRRQRPSSQARQPGLELTLSKA*CISCLP
Trigger: GGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGT...TAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCTTTGTCTTCTAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp CCCAGCCTTCCAGCTCTTCTGGCTGGGGCTGCACTGCTTGCGGGCTaGCCTGAGAGAAACCTGTATCCACAGCTGGGGAGCACTTACAGG +
Preference number: 5 (lower is better)
Translates to: PSLPALLAGAALLAG*PERNLYPQLGSTYR
Trigger: CCTGTAAGTGCTCCCCAGCTGTGGATACAGGTTTCTCTCAGGGCAGCCCGCAAGCAGTGCAGCCCCAGCCAGAAGAGCTGGAAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374222.5
CDS CCA 90 bp GCCTTCTCTCCTGAGAGCACAGCAGATGGACTCCAACAGGAAAACTaGGGACACAGCGGGCCTGGCCGCCCAGCCTTCCAGCTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AFSPESTADGLQQEN*GHSGPGRPAFQLFW
Trigger: CCAGAAGAGCTGGAAGGCTGGGCGGCCAGGCCCGCTGTGTCCCCAGTTTTCCTGTTGGAGTCCATCTGCTGTGCTCTCAGGAGAGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS-3UTR CAA 90 bp CCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGGCACTTTTCGGGTCTaGCTAAGGGAGGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: PAKHWGRHPAWHWLMGTSGTFRV*LREAKG
Trigger: ACCTTTGGCCTCCCTTAGCAAGACCCGAAAAGTGCC...AGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS TCA 90 bp CCTTCCAGCTCTTCTGGCTGGGGCTGCACTGCTTGCGGGCTGCCCTaGGAGAAACCTGTATCCACAGCTGGGGAGCACTTACAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: PSSSSGWGCTACGLP*EKPVSTAGEHLQGA
Trigger: AGCACCCTGTAAGTGCTCCCCAGCTGTGGATACAGGTTTCTCTCAGGGCAGCCCGCAAGCAGTGCAGCCCCAGCCAGAAGAGCTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374222.5
CDS TCA 90 bp TCTGGGCCTTCACCTGCTGCTCCAGGTCCCACAACTTCCTCGTCATaGAGGCCATCAGCTCCGAGTCATGGGATGCAGGGACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: SGPSPAAPGPTTSSS*RPSAPSHGMQGHAG
Trigger: CCCTGCGTGTCCCTGCATCCCATGACTCGGAGCTGATGGCCTTCATGACGAGGAAGTTGTGGGACCTGGAGCAGCAGGTGAAGGCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494942.5
CDS CCA 90 bp GCAACGCCTGGCACCACTGCCAGGACTCCCCAAAGTTGCTTGGCATaGAGGGAGGGCATACAGGATGTGAGCTCCCAGAGACCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: ATPGTTARTPQSCLA*REGIQDVSSQRPSL
Trigger: AAGGCTGGGTCTCTGGGAGCTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS-3UTR CAA 90 bp GGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCTCCCCATTCTCAGACTaGATGCGCAGCATGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GRHPAWHWLMGTSVGSISSPFSD*MRSMES
Trigger: GCTCTCCATGCTGCGCATCAAGTCTGAGAATGGGGA...GCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS TCA 90 bp CAGGCTGCATCATCAGTAGGAAGGCCTGTTCCCCATTCTCAGACTTaGTGCGCAGCATGGAGAGCGGGGGTGCCGGCGTGTTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: QAASSVGRPVPHSQT*CAAWRAGVPACWVT
Trigger: AGTCACCCAACACGCCGGCACCCCCGCTCTCCATGCTGCGCATCAAGTCTGAGAATGGGGAACAGGCCTTCCTACTGATGATGCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 90 bp TCTGGGCCTTCACCTGCTGCTCCAGGTCCCACAACTTCCTCGTCATaGAGGCCATCAGCTCCGAGTCATGGGATGCAGGGACTTGCCGAC +
Preference number: 5 (lower is better)
Translates to: SGPSPAAPGPTTSSS*RPSAPSHGMQGLAD
Trigger: GTCGGCAAGTCCCTGCATCCCATGACTCGGAGCTGATGGCCTTCATGACGAGGAAGTTGTGGGACCTGGAGCAGCAGGTGAAGGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374215.5
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000472155.5
CDS TCA 90 bp CACGAATGCCTTAAACACCCCCGCGTCATGACTCATGCTGTTTCCTaGGCCCTGGTGACACATGCTCCCTCCCGGACACGCCCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: HECLKHPRVMTHAVS*ALVTHAPSRTRPQC
Trigger: GCACTGAGGGCGTGTCCGGGAGGGAGCATGTGTCACCAGGGCTCAGGAAACAGCATGAGTCATGACGCGGGGGTGTTTAAGGCATTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp CTCAGTGCGGCACTAACCCACCACCTTCTAGAACACGAAGCCTCATaGGCTCTGGTGGTGGCACCTACCCATGGGGCCAGCTCTACCTCA +
Preference number: 5 (lower is better)
Translates to: LSAALTHHLLEHEAS*ALVVAPTHGASSTS
Trigger: TGAGGTAGAGCTGGCCCCATGGGTAGGTGCCACCACCAGAGCCCATGAGGCTTCGTGTTCTAGAAGGTGGTGGGTTAGTGCCGCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS-3UTR CAA 90 bp TTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATGTCAATCACCTCGCCTaGCCGGATCACAAACTTGGG +
Preference number: 5 (lower is better)
Translates to: LGPPSCLALADGHLCWFHVNHLA*PDHKLG
Trigger: CCCAAGTTTGTGATCCGGCAAGGCGAGGTGATTGAC...ATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CAA 90 bp GAACCTAGAAGACAAAGACCCAGCAGCCAGGCCCGCCAGCCGGGGCTCGAGTTATGGCTTTGTGCGGTGTaGAAGTGTCCCCACGAGTTG +
Preference number: 5 (lower is better)
Translates to: EPRRQRPSSQARQPGLELWLCAV*KCPHEL
Trigger: CAACTCGTGGGGACACTTCAACACCGCACAAAGCCA...TAACTCGAGCCCCGGCTGGCGGGCCTGGCTGCTGGGTCTTTGTCTTCTAGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CAA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGGCCCCCAGCCAAGCATaGGGGCCGCCATCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGAPSQA*GPPSCL
Trigger: CAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGC...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp CAGGTAAGAGCAACGCCTGGCACCACTGCCAGGACTCCCCAAAGTTaGTTGGCATGGAGGGAGGGCATACAGGATGTGAGCTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: QVRATPGTTARTPQS*LAWREGIQDVSSQR
Trigger: TCTCTGGGAGCTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCTCTTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS TCA 90 bp TCTGGGCCTTCACCTGCTGCTCCAGGTCCCACAACTTCCTCGTCATaGAGGCCATCAGCTCCGAGTCATGGGATGCAGGGACATCTCCAT +
Preference number: 5 (lower is better)
Translates to: SGPSPAAPGPTTSSS*RPSAPSHGMQGHLH
Trigger: ATGGAGATGTCCCTGCATCCCATGACTCGGAGCTGATGGCCTTCATGACGAGGAAGTTGTGGGACCTGGAGCAGCAGGTGAAGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357089.8
ENST00000374217.6
ENST00000374223.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000475591.5
CDS TCA 90 bp GGACTCCCCAAAGTTGCTTGGCATGGAGGGAGGGCATACAGGATGTaGGCTCCCAGAGACCCAGCCTTCTCTCCTGAGAGCACAGCAGAT +
Preference number: 5 (lower is better)
Translates to: GLPKVAWHGGRAYRM*APRDPAFSPESTAD
Trigger: ATCTGCTGTGCTCTCAGGAGAGAAGGCTGGGTCTCTGGGAGCTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS GCA 90 bp CAGCCTCCTGGTTATGGTACAGGTAAGAGCAACGCCTGGCACCACTaGCAGGACTCCCCAAAGTTGCTTGGCATGGAGGGAGGGCATACA +
Preference number: 5 (lower is better)
Translates to: QPPGYGTGKSNAWHH*QDSPKLLGMEGGHT
Trigger: TGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCTCTTACCTGTACCATAACCAGGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS GCA 90 bp CCGAGTCATGGGATGCAGGGACTTGCCGACTCACAGGGGCACCTATaGCGCCATAGCAGGAAGGGACTGAGATCTTTTCTTCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: PSHGMQGLADSQGHL*RHSRKGLRSFLLSH
Trigger: GTGGCTCAGAAGAAAAGATCTCAGTCCCTTCCTGCTATGGCGGCATAGGTGCCCCTGTGAGTCGGCAAGTCCCTGCATCCCATGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374215.5
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000472155.5
CDS CCA 90 bp TGCTCCTCTGGGTATACGGCTTTCTGCTCTGAACTGAGAGACCTTTaGCCTGGTGGTGCTTGGGAAAGTACACGCAGGGCCGCTAGCCGT +
Preference number: 5 (lower is better)
Translates to: CSSGYTAFCSELRDL*PGGAWESTRRAASR
Trigger: ACGGCTAGCGGCCCTGCGTGTACTTTCCCAAGCACCACCAGGCCAAAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374221.7
ENST00000423664.5
CDS-3UTR CAA 90 bp TGTGACTGTGCTGAGACTGCTCTGTGGGAAGGGTGGCTGAGCTGTTCTCTTGTGAAGTGTCCCCACGAGTaGGTGGGTCTGTGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: CDCAETALWEGWLSCSLVKCPHE*VGLCLC
Trigger: GCACAGGCACAGACCCACCAACTCGTGGGGACACTT...CACAAGAGAACAGCTCAGCCACCCTTCCCACAGAGCAGTCTCAGCACAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp GCCTGCGCTAGCAGAGCTCGCACGTCCCCAATGGTGTTGTCAGGCTaGATCATCAGTAGGAAGGCCTGTTCCCCATTCTCAGACTTGATG +
Preference number: 5 (lower is better)
Translates to: ACASRARTSPMVLSG*IISRKACSPFSDLM
Trigger: CATCAAGTCTGAGAATGGGGAACAGGCCTTCCTACTGATGATGCAGCCTGACAACACCATTGGGGACGTGCGAGCTCTGCTAGCGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp TGGGGCCCCGGATGTCAATCACCTCGCCTTGCCGGATCACAAACTTaGGGAGCCTGTTCAGAAATTTCTCAGCAGTCATCCTGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: WGPGCQSPRLAGSQT*GACSEISQQSSWSL
Trigger: CAGGCTCCAGGATGACTGCTGAGAAATTTCTGAACAGGCTCCCCAAGTTTGTGATCCGGCAAGGCGAGGTGATTGACATCCGGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
CDS CCA 90 bp AGCAACCATCAGCCTCCTGGTTATGGTACAGGTAAGAGCAACGCCTaGCACCACTGCCAGGACTCCCCAAAGTTGCTTGGCATGGAGGGA +
Preference number: 5 (lower is better)
Translates to: SNHQPPGYGTGKSNA*HHCQDSPKLLGMEG
Trigger: TCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCTCTTACCTGTACCATAACCAGGAGGCTGATGGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS CCA 90 bp TCTAGAACACGAAGCCTCATGGGCTCTGGTGGTGGCACCTACCCATaGGGCCAGCTCTACCTCATGTCTTTGAGTCCCAACATCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SRTRSLMGSGGGTYP*GQLYLMSLSPNICP
Trigger: GGGACAGATGTTGGGACTCAAAGACATGAGGTAGAGCTGGCCCCATGGGTAGGTGCCACCACCAGAGCCCATGAGGCTTCGTGTTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS-3UTR CAA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCACTGTGTCTGGTTGGTaGTGGCCTGGGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGTVSGW*WPGPPG
Trigger: CCCAGGAGGCCCAGGCCACAACCAACCAGACACAGT...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS CCA 90 bp AAGAAAGAAGGGCAACGACGGCAGCGGACCCAGCTCTTCAGCCCTTaGCCCCACTTTCATCCCTATTTGCCTAAACACAGGCCAAGGGTA +
Preference number: 5 (lower is better)
Translates to: KKEGQRRQRTQLFSP*PHFHPYLPKHRPRV
Trigger: TACCCTTGGCCTGTGTTTAGGCAAATAGGGATGAAAGTGGGGCCAAGGGCTGAAGAGCTGGGTCCGCTGCCGTCGTTGCCCTTCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 90 bp TGGGGCCCCGGATGTCAATCACCTCGCCTTGCCGGATCACAAACTTaGGGAGCCTGTTCAGAAATTTCTCAGCAGTCATCCTGGAGCCTA +
Preference number: 5 (lower is better)
Translates to: WGPGCQSPRLAGSQT*GACSEISQQSSWSL
Trigger: TAGGCTCCAGGATGACTGCTGAGAAATTTCTGAACAGGCTCCCCAAGTTTGTGATCCGGCAAGGCGAGGTGATTGACATCCGGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496466.1
CDS-3UTR CAA 90 bp ACAATGGCTAAGAATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGAGCAGCAGTGCTGCTTaGGGCACAAGGCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: TMAKNECIMGGGYPAAVLSSSAA*GTRPAA
Trigger: GGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCT...CAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATTCTTAGCCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS TCA 90 bp CGAGGGCAGGGGCACTTTTCGGGTCTTGCTAAGGGAGGCCAAAGGTaGGCTCATAGTTCTACTTCTAGAATCCAGCTGTCAGGAACTCCC +
Preference number: 5 (lower is better)
Translates to: RGQGHFSGLAKGGQR*AHSSTSRIQLSGTP
Trigger: GGGAGTTCCTGACAGCTGGATTCTAGAAGTAGAACTATGAGCTCACCTTTGGCCTCCCTTAGCAAGACCCGAAAAGTGCCCCTGCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000423664.5
ENST00000442942.6
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
CDS TCA 90 bp TGTTATCTGCCTGCTCCTCTGGGTATACGGCTTTCTGCTCTGAACTaGGAGACCTTTGGCCTGGTGGTGCTTGGGAAAGTACACGCAGGG +
Preference number: 5 (lower is better)
Translates to: CYLPAPLGIRLSALN*ETFGLVVLGKVHAG
Trigger: CCCTGCGTGTACTTTCCCAAGCACCACCAGGCCAAAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGGCAGATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374221.7
ENST00000423664.5
CDS-3UTR CAA 90 bp CTTTGTGCGGTGTTGAAGTGTCCCCACGAGTTGGTGGGTCTGTGCCTGTGCACATGCCGGATCACAAACTaGGGGAGCCTGTTCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LCAVLKCPHELVGLCLCTCRITN*GSLFRN
Trigger: ATTTCTGAACAGGCTCCCCAAGTTTGTGATCCGGCA...TGTGCACAGGCACAGACCCACCAACTCGTGGGGACACTTCAACACCGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS-3UTR CAA 90 bp AATGAGTGTATCATGGGAGGTGGGTACCCAGCTGCAGTTCTGCTAATTTGGGGGCTGCCCTGGGCAAGGTaGGTAGTTGTGACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: NECIMGGGYPAAVLLIWGLPWAR*VVVTVL
Trigger: CAGCACAGTCACAACTACCAACCTTGCCCAGGGCAG...CCCCCAAATTAGCAGAACTGCAGCTGGGTACCCACCTCCCATGATACACTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS TCA 90 bp CGAGGGCAGGGGCACTTTTCGGGTCTTGCTAAGGGAGGCCAAAGGTaGGCTCATAGTTCTACTTCTAGAATCCAGCTGTCAGGAACTCCA +
Preference number: 5 (lower is better)
Translates to: RGQGHFSGLAKGGQR*AHSSTSRIQLSGTP
Trigger: TGGAGTTCCTGACAGCTGGATTCTAGAAGTAGAACTATGAGCTCACCTTTGGCCTCCCTTAGCAAGACCCGAAAAGTGCCCCTGCCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS GCA 90 bp AGCGGACCCAGCTCTTCAGCCCTTGGCCCCACTTTCATCCCTATTTaGCTAAACACAGGCCAAGGGTATGGTCTAATGCAACCCCCATTT +
Preference number: 5 (lower is better)
Translates to: SGPSSSALGPTFIPI*LNTGQGYGLMQPPF
Trigger: AAATGGGGGTTGCATTAGACCATACCCTTGGCCTGTGTTTAGGCAAATAGGGATGAAAGTGGGGCCAAGGGCTGAAGAGCTGGGTCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 90 bp GTTTCTGTTATCTGCCTGCTCCTCTGGGTATACGGCTTTCTGCTCTaGACTGAGAGACCTTTGGCCTGGTGGTGCTTGGGAAAGTACACG +
Preference number: 5 (lower is better)
Translates to: VSVICLLLWVYGFLL*TERPLAWWCLGKYT
Trigger: CGTGTACTTTCCCAAGCACCACCAGGCCAAAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGGCAGATAACAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374221.7
ENST00000423664.5
CDS TCA 90 bp AACACAGGCCAAGGGTATGGTCTAATGCAACCCCCATTTTACATATaGGGAAACCCAGGCCTCAGGAGAGCCACGGTTCGTACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: NTGQGYGLMQPPFYI*GNPGLRRATVRTAV
Trigger: GACAGCAGTACGAACCGTGGCTCTCCTGAGGCCTGGGTTTCCTCATATGTAAAATGGGGGTTGCATTAGACCATACCCTTGGCCTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 90 bp TGGAAGTTTCTGTTATCTGCCTGCTCCTCTGGGTATACGGCTTTCTaGTCTGAACTGAGAGACCTTTGGCCTGGTGGTGCTTGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: WKFLLSACSSGYTAF*SELRDLWPGGAWES
Trigger: ACTTTCCCAAGCACCACCAGGCCAAAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGGCAGATAACAGAAACTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374221.7
ENST00000423664.5
ENST00000452980.5
CDS CCA 90 bp TCAGGAACTCCCTTTTGCCTCTTCCACTGTCTCCACAGAGGTTTCTaGAAGTTTCTGTTATCTGCCTGCTCCTCTGGGTATACGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SGTPFCLFHCLHRGF*KFLLSACSSGYTAF
Trigger: GAAAGCCGTATACCCAGAGGAGCAGGCAGATAACAGAAACTTCCAGAAACCTCTGTGGAGACAGTGGAAGAGGCAAAAGGGAGTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374221.7
ENST00000423664.5
ENST00000452980.5
CDS-3UTR CAA 90 bp CTGACACACAAATACCTGTATGGACCAGTGGTTTCTGGAGATGTCTGGGTGGGCTATCATGCTTGTGCCTaGGTGTGTAGTGCACATCTC +
Preference number: 5 (lower is better)
Translates to: LTHKYLYGPVVSGDVWVGYHACA*VCSAHL
Trigger: GAGATGTGCACTACACACCAAGGCACAAGCATGATA...GCCCACCCAGACATCTCCAGAAACCACTGGTCCATACAGGTATTTGTGTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS GCA 90 bp TTCCACTGTCTCCACAGAGGTTTCTGGAAGTTTCTGTTATCTGCCTaGTCCTCTGGGTATACGGCTTTCTGCTCTGAACTGAGAGACCTT +
Preference number: 5 (lower is better)
Translates to: FHCLHRGFWKFLLSA*SSGYTAFCSELRDL
Trigger: AAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGGCAGATAACAGAAACTTCCAGAAACCTCTGTGGAGACAGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374221.7
ENST00000423664.5
ENST00000452980.5
CDS CCA 72 bp CCTCGGCCTCTCCGTCATCCCCAGAGCCCAGAGCTCTaGCGGGGACACGGTCCGGCCCGCTGCCAGGACTCC +
Preference number: 6 (lower is better)
Translates to: PRPLRHPQSPEL*RGHGPARCQDS
Trigger: GGAGTCCTGGCAGCGGGCCGGACCGTGTCCCCGCCAGAGCTCTGGGCTCTGGGGATGACGGAGAGGCCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS GCA 72 bp AGCCCAGAGCTCTGGCGGGGACACGGTCCGGCCCGCTaGCAGGACTCCCTAATGCCCCCAGGACGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: SPELWRGHGPAR*QDSLMPPGRAQ
Trigger: CTGAGCGCGTCCTGGGGGCATTAGGGAGTCCTGGCAGCGGGCCGGACCGTGTCCCCGCCAGAGCTCTGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS GCA 72 bp AAGGCAGGGGCCCCGCAGCCGAGGCTGTCTCCAGGGTaGCAGCAGAGGGCGCTGCCTGCTGCTCTGTTTCGG +
Preference number: 6 (lower is better)
Translates to: KAGAPQPRLSPG*QQRALPAALFR
Trigger: CCGAAACAGAGCAGCAGGCAGCGCCCTCTGCTGGCACCCTGGAGACAGCCTCGGCTGCGGGGCCCCTGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp GAGCTTCAGCGGGATGGGCTCGAGGGTACGCAGCCGTaGCCCGCCGGGCACTGGTGTCACTTGGGTGTCACC +
Preference number: 6 (lower is better)
Translates to: ELQRDGLEGTQP*PAGHWCHLGVT
Trigger: GGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCACGGCTGCGTACCCTCGAGCCCATCCCGCTGAAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp GGACTTCGGGGCTCGGCGTGCCCGCAGCAGCAGTGCTaGTTTGGGCACAAGGCCTGCAGCCTGCAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: GLRGSACPQQQC*FGHKACSLQRE
Trigger: CTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCACGCCGAGCCCCGAAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp GGGCTCGAGGGTACGCAGCCGTGCCCCGCCGGGCACTaGTGTCACTTGGGTGTCACCCTCTACCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: GLEGTQPCPAGH*CHLGVTLYHQL
Trigger: GAGCTGGTGGTAGAGGGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCACGGCTGCGTACCCTCGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp CCTCCACCCTGTCCAAGGCCTTGTGCATCAGCTGCCTaGCCACCACACGGCCCTCGCCTGGGAAGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: PPPCPRPCASAA*PPHGPRLGRGP
Trigger: TGGACCCCTTCCCAGGCGAGGGCCGTGTGGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp TGCTCCTCCACCCTGTCCAAGGCCTTGTGCATCAGCTaGCTGCCCACCACACGGCCCTCGCCTGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: CSSTLSKALCIS*LPTTRPSPGKG
Trigger: CCCCTTCCCAGGCGAGGGCCGTGTGGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGTGGAGGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 90 bp AGGCTGGACTTCGGGGCTCGGCGTGCCCGCAGCAGCAGTGCTGCTTaGGGCACAAGGCCTGCAGCCTGCAGCGTGAGTGTATCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: RLDFGARRARSSSAA*GTRPAACSVSVSSW
Trigger: CCAGGACGATACACTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCACGCCGAGCCCCGAAGTCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 90 bp TGTCGCCTCCTTCCGCCTCCACGCGTAGTCATGGTAAGCAGGGTCTaGAACCTCTCCTGTGGGAGCCGCGGAGCTCGCAGGCCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: CRLLPPPRVVMVSRV*NLSCGSRGARRPSG
Trigger: CCCCGAGGGCCTGCGAGCTCCGCGGCTCCCACAGGAGAGGTTCAAGACCCTGCTTACCATGACTACGCGTGGAGGCGGAAGGAGGCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS GCA 72 bp AGCTGCACACACATCGTCTCCAGTTCCTCCTGCCGCTaGAGGGTTGCCTCGGCTGGGTGTGGCCGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SCTHIVSSSSCR*RVASAGCGRRV
Trigger: GACCCTCCGGCCACACCCAGCCGAGGCAACCCTGCAGCGGCAGGAGGAACTGGAGACGATGTGTGTGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000496466.1
CDS CCA 72 bp TCCTACGTGCCTGGCGAGATGGCCCACCCAAGAGCCTaGCGGAGCAGCGGGTTGAGGGGGCGGGTGCTTTAT +
Preference number: 6 (lower is better)
Translates to: SYVPGEMAHPRA*RSSGLRGRVLY
Trigger: ATAAAGCACCCGCCCCCTCAACCCGCTGCTCCGCCAGGCTCTTGGGTGGGCCATCTCGCCAGGCACGTAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314675.11
CDS CCA 72 bp CGTAGTCATGGTAAGCAGGGTCTTGAACCTCTCCTGTaGGAGCCGCGGAGCTCGCAGGCCCTCGGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: RSHGKQGLEPLL*EPRSSQALGAR
Trigger: CCGAGCCCCGAGGGCCTGCGAGCTCCGCGGCTCCCACAGGAGAGGTTCAAGACCCTGCTTACCATGACTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS CCA 72 bp GTGACTCCTGGCTCCTCTCTCGCTCAGCGGCCAAGGTaGGCGTCTCCACCACAATCTCCTGGATCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: VTPGSSLAQRPR*ASPPQSPGSGQ
Trigger: CTGCCCGGATCCAGGAGATTGTGGTGGAGACGCCCACCTTGGCCGCTGAGCGAGAGAGGAGCCAGGAGTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp CCGGCTTCAGACTTATCCTCCTGGAGGGCATCAGACTaGGGTCCCCCAGGGAGTGCAGCGGCTTCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: PASDLSSWRASD*GPPGSAAASPQ
Trigger: CTGAGGGGAAGCCGCTGCACTCCCTGGGGGACCCCAGTCTGATGCCCTCCAGGAGGATAAGTCTGAAGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp CGCTCCCTTCCCAGCCCGGCTTCAGACTTATCCTCCTaGAGGGCATCAGACTGGGGTCCCCCAGGGAGTGCA +
Preference number: 6 (lower is better)
Translates to: RSLPSPASDLSS*RASDWGPPGSA
Trigger: TGCACTCCCTGGGGGACCCCAGTCTGATGCCCTCCAGGAGGATAAGTCTGAAGCCGGGCTGGGAAGGGAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp AGGAACCGCTCCATCTCCCTGACCTGCCGCTGCAGCTaGACACACATCGTCTCCAGTTCCTCCTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: RNRSISLTCRCS*THIVSSSSCRC
Trigger: GCAGCGGCAGGAGGAACTGGAGACGATGTGTGTGCAGCTGCAGCGGCAGGTCAGGGAGATGGAGCGGTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000496466.1
CDS CCA 72 bp GTACGCAGCCGTGCCCCGCCGGGCACTGGTGTCACTTaGGTGTCACCCTCTACCACCAGCTCACTAAGATCC +
Preference number: 6 (lower is better)
Translates to: VRSRAPPGTGVT*VSPSTTSSLRS
Trigger: GGATCTTAGTGAGCTGGTGGTAGAGGGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCACGGCTGCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp TCAGGGAGCGACGTCTATCACGATCTAACCCAGCCCTaGAGGCCGTGTCGCCTCCTTCCGCCTCCACGCGTA +
Preference number: 6 (lower is better)
Translates to: SGSDVYHDLTQP*RPCRLLPPPRV
Trigger: TACGCGTGGAGGCGGAAGGAGGCGACACGGCCTCCAGGGCTGGGTTAGATCGTGATAGACGTCGCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421827.2
CDS CAA 72 bp GGTACGCAGCCGTGCCCCGCCGGGCACTGGTGTCACTaGGGTGTCACCCTCTACCACCAGCTCACTAAGATC +
Preference number: 6 (lower is better)
Translates to: GTQPCPAGHWCH*GVTLYHQLTKI
Trigger: GATCTTAGTGAGCTGGTGGTAGAGGGTGACACCCAAGTGACACCAGTGCCCGGCGGGGCACGGCTGCGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 72 bp GTGCTGCTTTGGGCACAAGGCCTGCAGCCTGCAGCGTaGGTGTATCGTCCTGGTAGAGGGTGGGCGGGAATG +
Preference number: 6 (lower is better)
Translates to: VLLWAQGLQPAA*VYRPGRGWAGM
Trigger: CATTCCCGCCCACCCTCTACCAGGACGATACACTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 72 bp GGCGACCAGGACCCGTGCACTTCTCATTGGCTAGTTTaGGGGAGGCCTGAGCAACCCTCAGGTGCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: GDQDPCTSHWLV*GRPEQPSGAGG
Trigger: TCCTCCCGCACCTGAGGGTTGCTCAGGCCTCCCTCAAACTAGCCAATGAGAAGTGCACGGGTCCTGGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450041.5
CDS GCA 72 bp TGCCCGCAGCAGCAGTGCTGCTTTGGGCACAAGGCCTaGAGCCTGCAGCGTGAGTGTATCGTCCTGGTAGAG +
Preference number: 6 (lower is better)
Translates to: CPQQQCCFGHKA*SLQRECIVLVE
Trigger: CTCTACCAGGACGATACACTCACGCTGCAGGCTGCAGGCCTTGTGCCCAAAGCAGCACTGCTGCTGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp CGTCTCCACCACAATCTCCTGGATCCGGGCAGGCAATaGGCAGCAGTTCTGCAAGGTGTCCCTGATGGGGCC +
Preference number: 6 (lower is better)
Translates to: RLHHNLLDPGRQ*AAVLQGVPDGA
Trigger: GGCCCCATCAGGGACACCTTGCAGAACTGCTGCCCATTGCCTGCCCGGATCCAGGAGATTGTGGTGGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp TCAGCGGCCAAGGTGGGCGTCTCCACCACAATCTCCTaGATCCGGGCAGGCAATGGGCAGCAGTTCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SAAKVGVSTTIS*IRAGNGQQFCK
Trigger: CTTGCAGAACTGCTGCCCATTGCCTGCCCGGATCCAGGAGATTGTGGTGGAGACGCCCACCTTGGCCGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp AACTTCCTCGTCATGAAGGCCATCAGCTCCGAGTCATaGGATGCAGGGACACGCAGGGCCGCTAGCCGTCCC +
Preference number: 6 (lower is better)
Translates to: NFLVMKAISSES*DAGTRRAASRP
Trigger: GGGACGGCTAGCGGCCCTGCGTGTCCCTGCATCCCATGACTCGGAGCTGATGGCCTTCATGACGAGGAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494942.5
CDS GCA 72 bp TCACTGAGGAACCGCTCCATCTCCCTGACCTGCCGCTaGAGCTGCACACACATCGTCTCCAGTTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SLRNRSISLTCR*SCTHIVSSSSC
Trigger: GCAGGAGGAACTGGAGACGATGTGTGTGCAGCTGCAGCGGCAGGTCAGGGAGATGGAGCGGTTCCTCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000496466.1
CDS GCA 72 bp CTGGTGACACATGCTCCCTCCCGGACACGCCCTCAGTaGGGCACTAACCCACCACCTTCTAGAACACGAAGC +
Preference number: 6 (lower is better)
Translates to: LVTHAPSRTRPQ*GTNPPPSRTRS
Trigger: GCTTCGTGTTCTAGAAGGTGGTGGGTTAGTGCCGCACTGAGGGCGTGTCCGGGAGGGAGCATGTGTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp CCCTGGCCTGCGCTAGCAGAGCTCGCACGTCCCCAATaGTGTTGTCAGGCTGCATCATCAGTAGGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: PWPALAELARPQ*CCQAASSVGRP
Trigger: AGGCCTTCCTACTGATGATGCAGCCTGACAACACCATTGGGGACGTGCGAGCTCTGCTAGCGCAGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp GCACTAACCCACCACCTTCTAGAACACGAAGCCTCATaGGCTCTGGTGGTGGCACCTACCCATGGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ALTHHLLEHEAS*ALVVAPTHGAS
Trigger: GCTGGCCCCATGGGTAGGTGCCACCACCAGAGCCCATGAGGCTTCGTGTTCTAGAAGGTGGTGGGTTAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp TTTCTCAGCAGTCATCCTGGAGCCTACAGGCAGAGTTaGGAACCGGGGCCCAGGAAGGACTGGGTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: FLSSHPGAYRQS*EPGPRKDWVLL
Trigger: GAGGAGCACCCAGTCCTTCCTGGGCCCCGGTTCCCAACTCTGCCTGTAGGCTCCAGGATGACTGCTGAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496466.1
CDS CAA 72 bp GGGGGCGCCAATGAGTCCCCTGGCTTCCAGAACTTCTaGGCTGTCATCCAGTCCCTCTCGCCATGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: GGANESPGFQNF*AVIQSLSPCSE
Trigger: CTCAGAGCATGGCGAGAGGGACTGGATGACAGCCAAGAAGTTCTGGAAGCCAGGGGACTCATTGGCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000442942.6
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 72 bp ACGCCTGGCACCACTGCCAGGACTCCCCAAAGTTGCTaGGCATGGAGGGAGGGCATACAGGATGTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: TPGTTARTPQSC*AWREGIQDVSS
Trigger: GGAGCTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS CAA 90 bp TCAGGCTGCATCATCAGTAGGAAGGCCTGTTCCCCATTCTCAGACTaGATGCGCAGCATGGAGAGCGGGGGTGCCGGCGTGTTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: SGCIISRKACSPFSD*MRSMESGGAGVLGD
Trigger: GTCACCCAACACGCCGGCACCCCCGCTCTCCATGCTGCGCATCAAGTCTGAGAATGGGGAACAGGCCTTCCTACTGATGATGCAGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 90 bp GTAAGAGCAACGCCTGGCACCACTGCCAGGACTCCCCAAAGTTGCTaGGCATGGAGGGAGGGCATACAGGATGTGAGCTCCCAGAGACCC +
Preference number: 6 (lower is better)
Translates to: VRATPGTTARTPQSC*AWREGIQDVSSQRP
Trigger: GGGTCTCTGGGAGCTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCTCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS CAA 72 bp ATCATCAGTAGGAAGGCCTGTTCCCCATTCTCAGACTaGATGCGCAGCATGGAGAGCGGGGGTGCCGGCGTG +
Preference number: 6 (lower is better)
Translates to: IISRKACSPFSD*MRSMESGGAGV
Trigger: CACGCCGGCACCCCCGCTCTCCATGCTGCGCATCAAGTCTGAGAATGGGGAACAGGCCTTCCTACTGATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 72 bp GCCTGCGCTAGCAGAGCTCGCACGTCCCCAATGGTGTaGTCAGGCTGCATCATCAGTAGGAAGGCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: ACASRARTSPMV*SGCIISRKACS
Trigger: GGAACAGGCCTTCCTACTGATGATGCAGCCTGACAACACCATTGGGGACGTGCGAGCTCTGCTAGCGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 72 bp AGCAACGCCTGGCACCACTGCCAGGACTCCCCAAAGTaGCTTGGCATGGAGGGAGGGCATACAGGATGTGAG +
Preference number: 6 (lower is better)
Translates to: SNAWHHCQDSPK*LGMEGGHTGCE
Trigger: CTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS CAA 72 bp ATTTCTCAGCAGTCATCCTGGAGCCTACAGGCAGAGTaGGGAACCGGGGCCCAGGAAGGACTGGGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: ISQQSSWSLQAE*GTGAQEGLGAP
Trigger: AGGAGCACCCAGTCCTTCCTGGGCCCCGGTTCCCAACTCTGCCTGTAGGCTCCAGGATGACTGCTGAGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496466.1
CDS CAA 90 bp ACAGGTAAGAGCAACGCCTGGCACCACTGCCAGGACTCCCCAAAGTaGCTTGGCATGGAGGGAGGGCATACAGGATGTGAGCTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: TGKSNAWHHCQDSPK*LGMEGGHTGCELPE
Trigger: CTCTGGGAGCTCACATCCTGTATGCCCTCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCTCTTACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS CAA 90 bp ATGACCCTGGCCTGCGCTAGCAGAGCTCGCACGTCCCCAATGGTGTaGTCAGGCTGCATCATCAGTAGGAAGGCCTGTTCCCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: MTLACASRARTSPMV*SGCIISRKACSPFS
Trigger: TGAGAATGGGGAACAGGCCTTCCTACTGATGATGCAGCCTGACAACACCATTGGGGACGTGCGAGCTCTGCTAGCGCAGGCCAGGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 72 bp TCACCTGCTGCTCCAGGTCCCACAACTTCCTCGTCATaGAGGCCATCAGCTCCGAGTCATGGGATGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SPAAPGPTTSSS*RPSAPSHGMQG
Trigger: TCCCTGCATCCCATGACTCGGAGCTGATGGCCTTCATGACGAGGAAGTTGTGGGACCTGGAGCAGCAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000421827.2
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
CDS TCA 72 bp GGCGACCAGGACCCGTGCACTTCTCATTGGCTAGTTTaGGGGAGGCCTGAGCAACCATCAGCCTCCTGGTTA +
Preference number: 6 (lower is better)
Translates to: GDQDPCTSHWLV*GRPEQPSASWL
Trigger: TAACCAGGAGGCTGATGGTTGCTCAGGCCTCCCTCAAACTAGCCAATGAGAAGTGCACGGGTCCTGGTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS GCA 72 bp CAAGGCATAGCTCCGAGGTCCCCGCTGTGGCACGAATaGCTTAAACACCCCCGCGTCATGACTCATGCTGTT +
Preference number: 6 (lower is better)
Translates to: QGIAPRSPLWHE*LKHPRVMTHAV
Trigger: AACAGCATGAGTCATGACGCGGGGGTGTTTAAGGCATTCGTGCCACAGCGGGGACCTCGGAGCTATGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp AACTTCCTCGTCATGAAGGCCATCAGCTCCGAGTCATaGGATGCAGGGACTTGCCGACTCACAGGGGCACCT +
Preference number: 6 (lower is better)
Translates to: NFLVMKAISSES*DAGTCRLTGAP
Trigger: AGGTGCCCCTGTGAGTCGGCAAGTCCCTGCATCCCATGACTCGGAGCTGATGGCCTTCATGACGAGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374215.5
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000472155.5
CDS GCA 72 bp GGTTATGGTACAGGTAAGAGCAACGCCTGGCACCACTaGCAGGACTCCCCAAAGTTGCTTGGCATGGAGGGA +
Preference number: 6 (lower is better)
Translates to: GYGTGKSNAWHH*QDSPKLLGMEG
Trigger: TCCCTCCATGCCAAGCAACTTTGGGGAGTCCTGGCAGTGGTGCCAGGCGTTGCTCTTACCTGTACCATAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374217.6
ENST00000374222.5
CDS GCA 72 bp GGGATGCAGGGACTTGCCGACTCACAGGGGCACCTATaGCGCCATAGCAGGAAGGGACTGAGATCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: GMQGLADSQGHL*RHSRKGLRSFL
Trigger: AAGAAAAGATCTCAGTCCCTTCCTGCTATGGCGGCATAGGTGCCCCTGTGAGTCGGCAAGTCCCTGCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374215.5
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000472155.5
CDS CCA 72 bp GGGTATACGGCTTTCTGCTCTGAACTGAGAGACCTTTaGCCTGGTGGTGCTTGGGAAAGTACACGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GYTAFCSELRDL*PGGAWESTRRA
Trigger: GGCCCTGCGTGTACTTTCCCAAGCACCACCAGGCCAAAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374221.7
ENST00000423664.5
CDS CCA 72 bp TTGCCTTATCAAGGCATAGCTCCGAGGTCCCCGCTGTaGCACGAATGCCTTAAACACCCCCGCGTCATGACT +
Preference number: 6 (lower is better)
Translates to: LPYQGIAPRSPL*HECLKHPRVMT
Trigger: AGTCATGACGCGGGGGTGTTTAAGGCATTCGTGCCACAGCGGGGACCTCGGAGCTATGCCTTGATAAGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp AGCAGAGCTCGCACGTCCCCAATGGTGTTGTCAGGCTaGATCATCAGTAGGAAGGCCTGTTCCCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: SRARTSPMVLSG*IISRKACSPFS
Trigger: TGAGAATGGGGAACAGGCCTTCCTACTGATGATGCAGCCTGACAACACCATTGGGGACGTGCGAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp TTGGACAGTATCTCATCAGTCTGGGCCTTCACCTGCTaGTCCAGGTCCCACAACTTCCTCGTCATGAAGGCC +
Preference number: 6 (lower is better)
Translates to: LDSISSVWAFTC*SRSHNFLVMKA
Trigger: GGCCTTCATGACGAGGAAGTTGTGGGACCTGGAGCAGCAGGTGAAGGCCCAGACTGATGAGATACTGTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000421827.2
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
CDS GCA 72 bp GCCACACCCATCACTCAACATGTCCACCTCATCTTCTaGAGACAGGGATGCCTAGGTCACCGCTCATCTCCA +
Preference number: 6 (lower is better)
Translates to: ATPITQHVHLIF*RQGCLGHRSSP
Trigger: TGGAGATGAGCGGTGACCTAGGCATCCCTGTCTGCAGAAGATGAGGTGGACATGTTGAGTGATGGGTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374215.5
ENST00000423664.5
CDS GCA 72 bp CTGTCCCCTCTGCTTTGCATTTGTGGCTCACAGCACTaGCTCCCACCCTACCCAGATAGCTTCAGGAGACTT +
Preference number: 6 (lower is better)
Translates to: LSPLLCICGSQH*LPPYPDSFRRL
Trigger: AAGTCTCCTGAAGCTATCTGGGTAGGGTGGGAGGCAGTGCTGTGAGCCACAAATGCAAAGCAGAGGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 72 bp CCTGCTCCTCTGGGTATACGGCTTTCTGCTCTGAACTaGGAGACCTTTGGCCTGGTGGTGCTTGGGAAAGTA +
Preference number: 6 (lower is better)
Translates to: PAPLGIRLSALN*ETFGLVVLGKV
Trigger: TACTTTCCCAAGCACCACCAGGCCAAAGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374221.7
ENST00000423664.5
ENST00000452980.5
CDS TCA 72 bp GCACCTACCCATGGGGCCAGCTCTACCTCATGTCTTTaGGTCCCAACATCTGTCCCCTCTGCTTTGCATTTG +
Preference number: 6 (lower is better)
Translates to: APTHGASSTSCL*VPTSVPSALHL
Trigger: CAAATGCAAAGCAGAGGGGACAGATGTTGGGACTCAAAGACATGAGGTAGAGCTGGCCCCATGGGTAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS GCA 72 bp TCCTTGGACAGTATCTCATCAGTCTGGGCCTTCACCTaGTGCTCCAGGTCCCACAACTTCCTCGTCATGAAG +
Preference number: 6 (lower is better)
Translates to: SLDSISSVWAFT*CSRSHNFLVMK
Trigger: CTTCATGACGAGGAAGTTGTGGGACCTGGAGCAGCAGGTGAAGGCCCAGACTGATGAGATACTGTCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000421827.2
ENST00000423664.5
ENST00000442942.6
ENST00000450041.5
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
CDS CAA 72 bp TTCATAGGCTCCGAGGGCAGGGGCACTTTTCGGGTCTaGCTAAGGGAGGCCAAAGGTGAGCTCATAGTTCTA +
Preference number: 6 (lower is better)
Translates to: FIGSEGRGTFRV*LREAKGELIVL
Trigger: TAGAACTATGAGCTCACCTTTGGCCTCCCTTAGCAAGACCCGAAAAGTGCCCCTGCCCTCGGAGCCTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000442942.6
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
CDS CAA 90 bp CTCCCAGGATTCATAGGCTCCGAGGGCAGGGGCACTTTTCGGGTCTaGCTAAGGGAGGCCAAAGGTGAGCTCATAGTTCTACTTCTAGAA +
Preference number: 6 (lower is better)
Translates to: LPGFIGSEGRGTFRV*LREAKGELIVLLLE
Trigger: TTCTAGAAGTAGAACTATGAGCTCACCTTTGGCCTCCCTTAGCAAGACCCGAAAAGTGCCCCTGCCCTCGGAGCCTATGAATCCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000442942.6
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
CDS TCA 72 bp CAAGGGTATGGTCTAATGCAACCCCCATTTTACATATaGGGAAACCCAGGCCTCAGGAGAGCCACGGTTCGT +
Preference number: 6 (lower is better)
Translates to: QGYGLMQPPFYI*GNPGLRRATVR
Trigger: ACGAACCGTGGCTCTCCTGAGGCCTGGGTTTCCTCATATGTAAAATGGGGGTTGCATTAGACCATACCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CCA 72 bp GGATGTCAATCACCTCGCCTTGCCGGATCACAAACTTaGGGAGCCTGTTCAGAAATTTCTCAGCAGTCATCC +
Preference number: 6 (lower is better)
Translates to: GCQSPRLAGSQT*GACSEISQQSS
Trigger: GGATGACTGCTGAGAAATTTCTGAACAGGCTCCCCAAGTTTGTGATCCGGCAAGGCGAGGTGATTGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000374223.5
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS CAA 72 bp CAGCTCTTCAGCCCTTGGCCCCACTTTCATCCCTATTaGCCTAAACACAGGCCAAGGGTATGGTCTAATGCA +
Preference number: 6 (lower is better)
Translates to: QLFSPWPHFHPY*PKHRPRVWSNA
Trigger: TGCATTAGACCATACCCTTGGCCTGTGTTTAGGCAAATAGGGATGAAAGTGGGGCCAAGGGCTGAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 72 bp GGGCACTTTTCGGGTCTTGCTAAGGGAGGCCAAAGGTaGGCTCATAGTTCTACTTCTAGAATCCAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: GHFSGLAKGGQR*AHSSTSRIQLS
Trigger: TGACAGCTGGATTCTAGAAGTAGAACTATGAGCTCACCTTTGGCCTCCCTTAGCAAGACCCGAAAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000314675.11
ENST00000357089.8
ENST00000374215.5
ENST00000374217.6
ENST00000374221.7
ENST00000374222.5
ENST00000421827.2
ENST00000423664.5
ENST00000442942.6
ENST00000452980.5
ENST00000472155.5
ENST00000475591.5
CDS GCA 72 bp CTCCACAGAGGTTTCTGGAAGTTTCTGTTATCTGCCTaGTCCTCTGGGTATACGGCTTTCTGCTCTGAACTG +
Preference number: 6 (lower is better)
Translates to: LHRGFWKFLLSA*SSGYTAFCSEL
Trigger: CAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGGCAGATAACAGAAACTTCCAGAAACCTCTGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374221.7
ENST00000423664.5
ENST00000452980.5
CDS GCA 72 bp AGCTCTTCAGCCCTTGGCCCCACTTTCATCCCTATTTaGCTAAACACAGGCCAAGGGTATGGTCTAATGCAA +
Preference number: 6 (lower is better)
Translates to: SSSALGPTFIPI*LNTGQGYGLMQ
Trigger: TTGCATTAGACCATACCCTTGGCCTGTGTTTAGGCAAATAGGGATGAAAGTGGGGCCAAGGGCTGAAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1
CDS TCA 72 bp AACTGCTGGCAGCCTCACATTCAGGACCTGAATGTGTaGTCCCGACAGTGCCGCTATTTTGCTAAATTGATC +
Preference number: 6 (lower is better)
Translates to: NCWQPHIQDLNV*SRQCRYFAKLI
Trigger: GATCAATTTAGCAAAATAGCGGCACTGTCGGGATCACACATTCAGGTCCTGAATGTGAGGCTGCCAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450041.5
CDS TCA 72 bp GTTAATGAAACTGCTGGCAGCCTCACATTCAGGACCTaGATGTGTGATCCCGACAGTGCCGCTATTTTGCTA +
Preference number: 6 (lower is better)
Translates to: VNETAGSLTFRT*MCDPDSAAILL
Trigger: TAGCAAAATAGCGGCACTGTCGGGATCACACATTCAGGTCCTGAATGTGAGGCTGCCAGCAGTTTCATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450041.5
CDS CCA 72 bp TTTCATCCCTATTTGCCTAAACACAGGCCAAGGGTATaGTCTAATGCAACCCCCATTTTACATATGAGGAAA +
Preference number: 6 (lower is better)
Translates to: FHPYLPKHRPRV*SNATPILHMRK
Trigger: TTTCCTCATATGTAAAATGGGGGTTGCATTAGACCATACCCTTGGCCTGTGTTTAGGCAAATAGGGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000472155.5
ENST00000475591.5
ENST00000494942.5
ENST00000496466.1