Pregenerated sensors for UBXN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000162191Ensembl transcript IDs: ENST00000294119.6, ENST00000301935.10, ENST00000436354.2, ENST00000524762.5, ENST00000525004.5, ENST00000525717.5, ENST00000526919.5, ENST00000527421.5, ENST00000528907.5, ENST00000529640.5, ENST00000531056.5, ENST00000531625.1, ENST00000532904.5, ENST00000533000.5, ENST00000533476.5, ENST00000533908.5, ENST00000534176.1, ENST00000616865.4
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATaGGAACAGCAGAAGGCACGAGTCCTGAAGATGGAAGAAAACAGG | + |
|
Preference number: 1 (lower is better) Translates to: DNGTKALSWDISWPQ*EQQKARVLKMEENR Trigger: CCTGTTTTCTTCCATCTTCAGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAAGGATACTTGGTTTTTaGTCCCAAAATTCCTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: WDKGPQLGHFLATMRTAERILGF*SQNSWP Trigger: AGGCCAGGAATTTTGGGAGCAAAAACCAAGTATCCT...TTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACAACCACAAGGATACTTaGTTTTTGCTCCCAAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: QRPSAGTFLGHNENSRRHNHKDT*FLLPKF Trigger: GAATTTTGGGAGCAAAAACCAAGTATCCTTGTGGTT...GTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAAGGATACTTGGTTTTaGCTCCCAAAATTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MGQRPSAGTFLGHNENSRKDTWF*LPKFLA Trigger: GGCCAGGAATTTTGGGAGCAAAAACCAAGTATCCTT...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | TGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAACCGTCAGCTCCGCCATaGCGCCGACACCGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WDKGPQLGHFLATMRTAEPSAPP*RRHRGF Trigger: GAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGG...TTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACAAGGCCGCCTTGCTCTaGGGAAGTGGGCTCCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRPSAGTFLGHNENSRRHKAALL*GSGLPS Trigger: GGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTT...GTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAGCCACTGGGGGTGGCTaGGAGCCCACACTGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRATGGG*EPTLPP Trigger: TGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGC...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | ACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCCGGGGACCTGGTGTGTaGCGAGAAGGAGGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TMGQRPSAGTFLGHNENSRGPGV*REGGRE Trigger: TTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCG...GCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | TGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAATGCCCTGGTTCCCTGTaGGGGCCAGAGCCTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WDKGPQLGHFLATMRTAECPGSL*GPEPSP Trigger: CGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCA...TTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACGCTTCCGCGGGGACCTaGTGTGTGACGAGAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRPSAGTFLGHNENSRRHASAGT*CVTRRR Trigger: CCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGC...GTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACGCAGCCTCGATGCCCTaGTTCCCTGTGAGGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRPSAGTFLGHNENSRRHAASMP*FPVRAR Trigger: TCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGC...GTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACGGTCATACTCCCGCTTaGTGGGAGGCTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRPSAGTFLGHNENSRRHGHTPA*WEAPGW Trigger: CCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACC...GTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | AGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACGAGTCGGGGTCGTCTTCGTaGTCCATCAGCCAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RPSAGTFLGHNENSRRHESGSSS*SISQSI Trigger: GATGGACTGGCTGATGGAGCACGAAGACGACCCCGA...CTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAATAGAGCCTCACAGCTaGCAGCTGTTCCCGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHFLATMRTIEPHS*QLFPGP Trigger: CGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTAT...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | CAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCACATACTCCCGCTTGGTaGGAGGCTCCTGGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QWDKGPQLGHFLATMRTAHTPAW*EAPGWE Trigger: CTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATG...TGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGACCTTGTCTCCTGCGCTaGCGTTCCCGTTCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRPCLLR*RSRSNA Trigger: GGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGG...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACACTTGCCCTTGTCTCCTaGGCTGCCGTTCCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHFLATMRTLALVS*AAVPVP Trigger: TGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAG...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | TGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGCCATACCCAGCTCCTaGAGAGGCCGCTCCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WDKGPQLGHFLATMRTAEAIPSS*RGRSMS Trigger: TGACATGGAGCGGCCTCTGCAGGAGCTGGGTATGGC...TTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGACCGCTGTCGTGCTGCTaGCAACTCTTGCCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRPLSCC*QLLPLS Trigger: AGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGG...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGACTCCATGTCAGCTTCTaGGAAGGCCCGTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRLHVSF*EGPSGE Trigger: TTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAG...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCTGCTGACAACTCTTaGCCTTGTCTCCTGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHFLATMRTAADNS*PCLLRC Trigger: GCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGCAGC...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAAGCCACTGAGCAATTaGACAGGGTCCTGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRKPLSN*TGSWPP Trigger: TGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTT...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | TTGGCCACAATGAGAACAGCAGAAGGCACGAGTCCTGAAGATGGAAGAAAACAGAACAGGACCTGGCTCTaGTGCCACTGGGGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LATMRTAEGTSPEDGRKQNRTWL*CHWGWL Trigger: CAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTT...CTGTTTTCTTCCATCTTCAGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAAATTGCACAGGGTCCTaGCCCCCACCTAGTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHFLATMRTNCTGS*PPPSSS Trigger: GGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATT...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| 3UTR CAA 72 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTaGGCCACAATGAGAACAGCAGAAGGCACGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHF*ATMRTAEGTSP Trigger: AGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | TGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAACACTCAAAGCGGGTTTaGCTTCTCCGGCAGCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WDKGPQLGHFLATMRTAEHSKRV*LLRQQN Trigger: GTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTG...TTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACACCGTTCCCGTTCCAATaGCTCCCGTTCCTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHFLATMRTPFPFQ*LPFLSF Trigger: GAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGG...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | CAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCACTTGCTCTGAGGAAGTaGGCTCCCGTCCCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QWDKGPQLGHFLATMRTALALRK*APVPGY Trigger: ATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAG...TGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | AGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACGAGGTGCTTTATCAAAGATaGAGGGGTCACAGAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RPSAGTFLGHNENSRRHEVLYQR*RGHRGT Trigger: TGTCCCTCTGTGACCCCTTCATCTTTGATAAAGCAC...CTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | TTGGCCACAATGAGAACAGCAGAAGGCACGAGTCCTGAAGATGGAAGAAAACAGGGAAGCCCATCTCGATaGGACTCTCAAGAGCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LATMRTAEGTSPEDGRKQGSPSR*DSQEPS Trigger: TGACGGCTCTTGAGAGTCTCATCGAGATGGGCTTCC...CTGTTTTCTTCCATCTTCAGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACATGCCACCATACTTCTTaGCTCTCTCTGCTTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQWDKGPQLGHFLATMRTCHHTS*LSLLCP Trigger: GGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCA...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAATGGTGCCACTGGGGGTaGCTGAGAGCCCACACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KMEENRLEPQGYLVFAPKWCHWG*LRAHTA Trigger: GGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCA...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAACAAAGGCCCTCAGCTaGGACATTTCTTGGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRTKALS*DISWPQ Trigger: TTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGT...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAATCTTCACGCTCCCGCTaGTTCTGGGCCACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMEENRLEPQGYLVFAPKSSRSR*FWATSS Trigger: GGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGA...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAACGCTCCCGCTGCTTCTaGGCCACCAGCTCCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KMEENRLEPQGYLVFAPKRSRCF*ATSSNI Trigger: GATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCG...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAAAGAGGGAACAGGACCTaGCTCTGGTGCCACTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKRGNRT*LWCHWG Trigger: CCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCT...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAACGGGCCCGGAACGTCTaGGTCAGTGAGGTCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKRARNV*VSEVPS Trigger: AGATGGGACCTCACTGACCCAGACGTTCCGGGCCCG...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAACCTTCAAGGCCGCCTTaGTCTGAGGAAGTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMEENRLEPQGYLVFAPKPSRPP*SEEVGS Trigger: GGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGG...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR TCA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAAGTCTGGGGAAGCCACTaGGCAATTGCACAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKVWGSH*AIAQGP Trigger: AGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGAC...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | TTGGCCACAATGAGAACAGCAGAAGGCACGAGTCCTGAAGATGGAAGAAAACAGCTTCTTGGCTCTCTCTaGTTTGTCCCTCTCGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LATMRTAEGTSPEDGRKQLLGSL*FVPLDL Trigger: AAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAG...CTGTTTTCTTCCATCTTCAGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | TTGGCCACAATGAGAACAGCAGAAGGCACGAGTCCTGAAGATGGAAGAAAACAGCAAAATTCCTGGCCTTaGACCATGTTCACAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LATMRTAEGTSPEDGRKQQNSWP*TMFTKP Trigger: GGGCTTTGTGAACATGGTGCAAGGCCAGGAATTTTG...CTGTTTTCTTCCATCTTCAGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGATACTTGGTTTTTaGTCCCAAAATTCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MGQRPSAGTFLGHNENSRRILGF*SQNSWP Trigger: AGGCCAGGAATTTTGGGAGCAAAAACCAAGTATCCT...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAGCTGAGAGCCCACACTaGCACCATACTTCTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KMEENRLEPQGYLVFAPKAESPH*HHTSWL Trigger: GAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGC...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAAACCTGTATGCGACACTaGTCATACTCCCGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKTCMRH*SYSRLV Trigger: CACCAAGCGGGAGTATGACCAGTGTCGCATACAGGT...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | CAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAAACCACAAGGATACTTaGTTTTTGCTCCCAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: QWDKGPQLGHFLATMRTANHKDT*FLLPKF Trigger: GAATTTTGGGAGCAAAAACCAAGTATCCTTGTGGTT...TGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR GCA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAAAAAGCCCCTTCTCTTTaGATCCCTCCTTTTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKKAPSL*IPPFPR Trigger: CCTAGGAAAAGGAGGGATGCAAAGAGAAGGGGCTTT...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CCA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAATGCTCCCAAAATTCCTaGCCTTGCACCATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKCSQNS*PCTMFT Trigger: TGTGAACATGGTGCAAGGCCAGGAATTTTGGGAGCA...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS TCA 90 bp | GGGCCAGAGCCTTCTCCGCGCGTCCCCTGGGGAAGCCCATCTCGATaGGACTCTCAAGAGCCGTCAGCTCCGCCATGGCGCCGACACCGC | + |
|
Preference number: 5 (lower is better) Translates to: GPEPSPRVPWGSPSR*DSQEPSAPPWRRHR Trigger: GCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000528907.5 ENST00000529640.5 ENST00000531056.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CCA 90 bp | TGGGCCACCAGCTCCAACATCCAGTCCATCGCAGCCTCGATGCCCTaGTTCCCTGTGAGGGCCAGAGCCTTCTCCGCGCGTCCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WATSSNIQSIAASMP*FPVRARAFSARPLG Trigger: CCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGATGTTGGAGCTGGTGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616865.4 |
||
| CDS TCA 90 bp | CTCCCTGGGGGCAGAAACACCATGAATAGCGCCCACGAGCCATGGTaGCGGTCAGGCTGGGGCAAAGGCCGAGACAGGTCCGCGACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGGRNTMNSAHEPW*RSGWGKGRDRSATP Trigger: GGGGGTCGCGGACCTGTCTCGGCCTTTGCCCCAGCCTGACCGTCACCATGGCTCGTGGGCGCTATTCATGGTGTTTCTGCCCCCAGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000527421.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 90 bp | TCGTCTTCGTGCTCCATCAGCCAGTCCATCGCAGCCTCGATGCCCTaGTTCCCTGTGAGGGCCAGAGCCTTCTCCGCGCGTCCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSISQSIAASMP*FPVRARAFSARPLG Trigger: CCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGAAGACGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000528907.5 ENST00000529640.5 ENST00000531056.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS TCA 90 bp | GGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTGGCTaGGAGCCCACACTGCCACCATACTGCCCACTCCATTACCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GEEGTGPGSGATGGG*EPTLPPYCPLHYPW Trigger: CCACGGGTAATGGAGTGGGCAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526919.5 |
||
| CDS CCA 90 bp | GTATGCGACACTGGTCATACTCCCGCTTGGTGGGAGGCTCCTGGCTaGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCDTGHTPAWWEAPG*EKREQDLALVPLGV Trigger: CACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000525717.5 ENST00000527421.5 ENST00000529640.5 ENST00000532904.5 ENST00000533000.5 ENST00000533476.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CCA 90 bp | GCTGGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTaGCTGAGAGCCCACACTGCCACCATACTGCCCACTCCATTACCC | + |
|
Preference number: 5 (lower is better) Translates to: AGRRGNRTWLWCHWG*LRAHTATILPTPLP Trigger: GGGTAATGGAGTGGGCAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526919.5 |
||
| CDS TCA 90 bp | AGGCACGAGTCCCAGCTCCTGCAGAGGCCGCTCCATGTCAGCTTCTaGGAAGGCCCGTCTGGGGAAGCCACTGAGCAATTGCACAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHESQLLQRPLHVSF*EGPSGEATEQLHRV Trigger: GACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGGACTCGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301935.10 ENST00000525717.5 ENST00000529640.5 ENST00000533476.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS TCA 90 bp | TTCCCTGTGAGGGCCAGAGCCTTCTCCCTGGGGGCAGAAACACCATaGATAGCGCCCACGAGCCATGGTGACGGTCAGGCTGGGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPVRARAFSLGAETP*IAPTSHGDGQAGAK Trigger: CTTTGCCCCAGCCTGACCGTCACCATGGCTCGTGGGCGCTATTCATGGTGTTTCTGCCCCCAGGGAGAAGGCTCTGGCCCTCACAGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000527421.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 90 bp | GCTGGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTaGCTGAGAGCCCACACTGCCACCATACTTCTTGGCTCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGRRGNRTWLWCHWG*LRAHTATILLGSLC Trigger: GCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000529640.5 ENST00000533000.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CCA 90 bp | ACCTGTATGCGACACTGGTCATACTCCCGCTTGGTGGGAGGCTCCTaGCTGGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TCMRHWSYSRLVGGS*LGEEGTGPGSGATG Trigger: CCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000525717.5 ENST00000527421.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CCA 90 bp | TCGTCTTCGTGCTCCATCAGCCAGTCCATCGCAGCCTCGATGCCCTaGTTCCCTGTGAGGGCCAGAGCCTTCTCCCTGGGGGCAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: SSSCSISQSIAASMP*FPVRARAFSLGAET Trigger: TGTTTCTGCCCCCAGGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGAAGACGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000527421.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 90 bp | TCCTGTATGCGACACTGGTCATACTCCCGCTTGGTGGGAGGCTCCTaGCTGGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCMRHWSYSRLVGGS*LGEEGTGPGSGATG Trigger: CCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533000.5 |
||
| CDS TCA 90 bp | TGCAGCCATACCCAGCTCCTGCAGAGGCCGCTCCATGTCAGCTTCTaGGAAGGCCCGTCTGGGGAAGCCACTGAGCAATTGCACAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CSHTQLLQRPLHVSF*EGPSGEATEQLHRV Trigger: GACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGGTATGGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294119.6 ENST00000532904.5 |
||
| CDS TCA 90 bp | TCACACCGTGGACCCTCAGTCAGGACCTTCAAGGCCGCCTTGCTCTaGGGAAGTGGGCTCCCGTCCCAGGATATGTCCAAGGGGAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHRGPSVRTFKAALL*GSGLPSQDMSKGSL Trigger: GAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGTCCTGACTGAGGGTCCACGGTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531056.5 ENST00000531625.1 |
||
| CDS GCA 90 bp | TCCCGTTCCAATGCCTCCCGTTCCTCTCTTTCTTCACGCTCCCGCTaGTTCTGGGCCACCAGCTCCAACATCCAGTCCATCGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRSNASRSSLSSRSR*FWATSSNIQSIAAS Trigger: CGAGGCTGCGATGGACTGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616865.4 |
||
| CDS TCA 90 bp | GGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTGGCTaGGAGCCCACACTGCCACCATACTTCTTGGCTCTCTCTGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEEGTGPGSGATGGG*EPTLPPYFLALSAL Trigger: CAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000529640.5 ENST00000533000.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS GCA 90 bp | AGCCGCTGTCGTGCTGCTGACAACTCTTGCCCTTGTCTCCTGCGCTaGCGTTCCCGTTCCAATGCCTCCCGTTCCTCTCTTTCTTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: SRCRAADNSCPCLLR*RSRSNASRSSLSSR Trigger: GCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS GCA 90 bp | CCTGTAGCCGCTGTCGTGCTGCTGACAACTCTTGCCCTTGTCTCCTaGGCTGCCGTTCCCGTTCCAATGCCTCCCGTTCCTCTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVAAVVLLTTLALVS*AAVPVPMPPVPLFL Trigger: AAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CCA 90 bp | CGGCAGCAGAACCAGATCCTTCAAGGCCGCCTTGCTCTGAGGAAGTaGGCTCCCGTCCCAGGATATGTCCAAGGGGAGTCTCTAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQQNQILQGRLALRK*APVPGYVQGESLKA Trigger: AGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS CCA 90 bp | TGGACCCTCAGTCAGGACCTTCAAGGCCGCCTTGCTCTGAGGAAGTaGGCTCCCGTCCCAGGATATGTCCAAGGGGAGTCTCTAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WTLSQDLQGRLALRK*APVPGYVQGESLKA Trigger: AGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGTCCTGACTGAGGGTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531056.5 ENST00000531625.1 |
||
| CDS TCA 90 bp | GACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATaGGAACAGCAGAAGGCACGAGTCCCAGCTCCTGCAGAGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: DNGTKALSWDISWPQ*EQQKARVPAPAEAA Trigger: AGCGGCCTCTGCAGGAGCTGGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000301935.10 ENST00000525717.5 ENST00000529640.5 ENST00000533476.5 ENST00000616865.4 |
||
| CDS TCA 90 bp | CCCGGGCCCGGAACGTCTGGGTCAGTGAGGTCCCATCTGGCAGCCTaGCCTAAAGGGCAAGGGAGATACTCAGTATTGTGGGCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGPGTSGSVRSHLAA*PKGQGRYSVLWASK Trigger: TTTTGATGCCCACAATACTGAGTATCTCCCTTGCCCTTTAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532904.5 ENST00000533476.5 |
||
| CDS GCA 90 bp | CAGTTTCTAGTCCTGGTTTCTAGTCTTGCAGCCATACCCAGCTCCTaGAGAGGCCGCTCCATGTCAGCTTCTGAGAAGGCCCGTCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QFLVLVSSLAAIPSS*RGRSMSASEKARLG Trigger: CCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGGTATGGCTGCAAGACTAGAAACCAGGACTAGAAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294119.6 ENST00000532904.5 |
||
| CDS GCA 90 bp | AATAATCACACCGTGGACCCTCAGTCAGGACCTTCAAGGCCGCCTTaGTCTGAGGAAGTGGGCTCCCGTCCCAGGATATGTCCAAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NNHTVDPQSGPSRPP*SEEVGSRPRICPRG Trigger: TCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGTCCTGACTGAGGGTCCACGGTGTGATTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531056.5 ENST00000531625.1 |
||
| CDS CCA 90 bp | TCCAATGCCTCCCGTTCCTCTCTTTCTTCACGCTCCCGCTGCTTCTaGGCCACCAGCTCCAACATCCTGTGTTGCCGAGGGAAAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SNASRSSLSSRSRCF*ATSSNILCCRGKTV Trigger: AACTGTTTTCCCTCGGCAACACAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528907.5 |
||
| CDS-3UTR CAA 90 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACATGGTCATACTCCCGCTaGGTGGGAGGCTCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQWDKGPQLGHFLATMRTWSYSR*VGGSWL Trigger: CAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCA...TGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS GCA 90 bp | TCCCGTTCCAATGCCTCCCGTTCCTCTCTTTCTTCACGCTCCCGCTaGTTCTGGGCCACCAGCTCCAACATCCTCTTAGTTTGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRSNASRSSLSSRSR*FWATSSNILLVCSC Trigger: ACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS TCA 90 bp | GACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATaGGAACAGCAGAAGGCACGAGTCCTGTATGCGACACTGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: DNGTKALSWDISWPQ*EQQKARVLYATLVI Trigger: TATGACCAGTGTCGCATACAGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533000.5 |
||
| CDS CCA 90 bp | CCCAAGAGGAAGATAAGAATTAGAATCAGTACCTGTATGCGACACTaGTCATACTCCCGCTTGGTGGGAGGCTCCTGGCTGGGAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKRKIRIRISTCMRH*SYSRLVGGSWLGEE Trigger: CTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTACTGATTCTAATTCTTATCTTCCTCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532904.5 ENST00000533476.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGATCCTGGTTTCTAGTCTaGCAGCCATACCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MGQRPSAGTFLGHNENSRSWFLV*QPYPAP Trigger: AGGAGCTGGGTATGGCTGCAAGACTAGAAACCAGGA...TCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CAA 90 bp | AGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAAGGCACGAGTGGAAGAAAACAGGCTaGAACCACAAGGATACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSAGTFLGHNENSRRHEWKKTG*NHKDTW Trigger: CCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCA...CTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS TCA 90 bp | AAACAATCGGTATTATTATCCCTTCAGATTCTCCTCGGACCCTCCTaGATAATCACACCGTGGACCCTCAGTCAGGACCTTCAAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KQSVLLSLQILLGPS*IITPWTLSQDLQGR Trigger: GCGGCCTTGAAGGTCCTGACTGAGGGTCCACGGTGTGATTATTCAGGAGGGTCCGAGGAGAATCTGAAGGGATAATAATACCGATTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531056.5 |
||
| CDS CCA 90 bp | GTGGAAAGGTCAAGGTTCTTTGACCAGACGTGTACTGGGGAGAGATaGAAGACGACCCTCAGACACGTGAGATTGTTGTTACTGTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VERSRFFDQTCTGER*KTTLRHVRLLLLYL Trigger: GAGGTACAGTAACAACAATCTCACGTGTCTGAGGGTCGTCTTCCATCTCTCCCCAGTACACGTCTGGTCAAAGAACCTTGACCTTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS-3UTR CAA 90 bp | TGGGACAAAGGCCCTCAGCTGGGACATTTCTTGGCCACAATGAGAACAGCAGAATTGGCTCTCTCTGCTTaGTCCCTCTCGATCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WDKGPQLGHFLATMRTAELALSA*SLSIFS Trigger: AGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAA...TTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS GCA 90 bp | ATAAGCCCATGCTTTCCCTCTGAAGCTGGAAAAGATTTACTAACCTaGCCACTCCATTACCCGTGGCGTCTTCTCAGTCACCTACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISPCFPSEAGKDLLT*PLHYPWRLLSHLPS Trigger: AGAAGGTAGGTGACTGAGAAGACGCCACGGGTAATGGAGTGGGCAGGTTAGTAAATCTTTTCCAGCTTCAGAGGGAAAGCATGGGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525717.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 90 bp | TCTGAAGCTGGAAAAGATTTACTAACCTGCCCACTCCATTACCCGTaGCGTCTTCTCAGTCACCTACCTTCTTGGCTCTCTCTGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SEAGKDLLTCPLHYP*RLLSHLPSWLSLLC Trigger: ACAAAGCAGAGAGAGCCAAGAAGGTAGGTGACTGAGAAGACGCCACGGGTAATGGAGTGGGCAGGTTAGTAAATCTTTTCCAGCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525717.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS TCA 90 bp | AAGAAAATGCCAAGAAAGAGGAAATGTGGAAAGGTCAAGGTTCTTTaGCCAGACGTGTACTGGGGAGAGATGGAAGACGACCCTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: KKMPRKRKCGKVKVL*PDVYWGEMEDDPQT Trigger: TGTCTGAGGGTCGTCTTCCATCTCTCCCCAGTACACGTCTGGTCAAAGAACCTTGACCTTTCCACATTTCCTCTTTCTTGGCATTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS-3UTR CAA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAATCACTCAAAGCGGGTTaGCCTTCTCCGGCAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKSLKAG*PSPAAE Trigger: TTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGA...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CAA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAACTGCCACCATACTTCTaGGCTCTCTCTGCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KMEENRLEPQGYLVFAPKLPPYF*ALSALS Trigger: GGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAG...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CAA 90 bp | AAGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAACCAAAATTCCTGGCCTaGCACCATGTTCACAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KMEENRLEPQGYLVFAPKPKFLA*HHVHKA Trigger: GGCTTTGTGAACATGGTGCAAGGCCAGGAATTTTGG...TTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CAA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAAAAGGATACTTGGTTTTaGCTCCCAAAATTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKKDTWF*LPKFLA Trigger: GGCCAGGAATTTTGGGAGCAAAAACCAAGTATCCTT...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS-3UTR CAA 90 bp | AGATGGAAGAAAACAGGCTTGAACCACAAGGATACTTGGTTTTTGCTCCCAAAACAACATCCTCTTAGTTaGTTCCTGTCTTTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RWKKTGLNHKDTWFLLPKQHPLS*FLSFLF Trigger: GAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTG...TTTTGGGAGCAAAAACCAAGTATCCTTGTGGTTCAAGCCTGTTTTCTTCCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000294119.6 |
||
| CDS CCA 90 bp | ATCCTGTGTTGCCGAGGGAAAACAGTTCAAGAGAAATGGACAGAGTaGGAAGGTGTAAAGTTTACAATAAACAAAATTAGGCGACATATA | + |
|
Preference number: 5 (lower is better) Translates to: ILCCRGKTVQEKWTE*EGVKFTINKIRRHI Trigger: TATATGTCGCCTAATTTTGTTTATTGTAAACTTTACACCTTCCCACTCTGTCCATTTCTCTTGAACTGTTTTCCCTCGGCAACACAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528907.5 |
||
| CDS TCA 72 bp | GCGCCGACACCGCGGCTTCCGCGGGGACCTGGTGTGTaGCGAGAAGGAGGGCGGGAAGGGTCAGCGCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: APTPRLPRGPGV*REGGREGSARG Trigger: GCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000531056.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000616865.4 |
||
| CDS CCA 72 bp | CGCCATGGCGCCGACACCGCGGCTTCCGCGGGGACCTaGTGTGTGACGAGAAGGAGGGCGGGAAGGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHGADTAASAGT*CVTRRRAGRVS Trigger: GCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000531056.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000616865.4 |
||
| CDS TCA 72 bp | CCTTCTCCGCGCGTCCCCTGGGGAAGCCCATCTCGATaGGACTCTCAAGAGCCGTCAGCTCCGCCATGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PSPRVPWGSPSR*DSQEPSAPPWR Trigger: GCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000528907.5 ENST00000529640.5 ENST00000531056.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS GCA 72 bp | CTCCCCACGGTGGAGCTCCACATAGAGCCTCACAGCTaGCAGCTGTTCCCGGGCCCGGAACGTCTGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPTVELHIEPHS*QLFPGPERLGQ Trigger: CTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000525004.5 ENST00000525717.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS TCA 72 bp | TCCCTTACGCGCGTCCCCTGGGGAAGCCCATCTCGATaGGACTCTCAAGAGCCGTCAGCTCCGCCATGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLTRVPWGSPSR*DSQEPSAPPWR Trigger: GCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGTAAGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000527421.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 72 bp | TGCTCCATCAGCCAGTCCATCGCAGCCTCGATGCCCTaGTTCCCTGTGAGGGCCAGAGCCTTCTCCGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: CSISQSIAASMP*FPVRARAFSAR Trigger: ACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000528907.5 ENST00000529640.5 ENST00000531056.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS TCA 72 bp | GGAACAGGACCTGGCTCTGGTGCCACTGGGGGTGGCTaGGAGCCCACACTGCCACCATACTGCCCACTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GTGPGSGATGGG*EPTLPPYCPLH Trigger: ATGGAGTGGGCAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526919.5 |
||
| CDS CCA 72 bp | AGAGGGAACAGGACCTGGCTCTGGTGCCACTGGGGGTaGCTGAGAGCCCACACTGCCACCATACTGCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RGNRTWLWCHWG*LRAHTATILPT Trigger: AGTGGGCAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526919.5 |
||
| CDS CCA 72 bp | GGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTaGGGGTGGCTGAGAGCCCACACTGCCACCATACTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRGNRTWLWCH*GWLRAHTATIL Trigger: CAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526919.5 |
||
| CDS CCA 72 bp | AGCTCCAACATCCAGTCCATCGCAGCCTCGATGCCCTaGTTCCCTGTGAGGGCCAGAGCCTTCTCCGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSNIQSIAASMP*FPVRARAFSAR Trigger: ACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGATGTTGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616865.4 |
||
| CDS TCA 72 bp | GGAACAGGACCTGGCTCTGGTGCCACTGGGGGTGGCTaGGAGCCCACACTGCCACCATACTTCTTGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTGPGSGATGGG*EPTLPPYFLAL Trigger: GAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000529640.5 ENST00000533000.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS TCA 72 bp | GGCAGAAACACCATGAATAGCGCCCACGAGCCATGGTaGCGGTCAGGCTGGGGCAAAGGCCGAGACAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRNTMNSAHEPW*RSGWGKGRDRS Trigger: GGACCTGTCTCGGCCTTTGCCCCAGCCTGACCGTCACCATGGCTCGTGGGCGCTATTCATGGTGTTTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000527421.5 ENST00000531625.1 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 72 bp | GGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTaGGGGTGGCTGAGAGCCCACACTGCCACCATACTT | + |
|
Preference number: 6 (lower is better) Translates to: GRRGNRTWLWCH*GWLRAHTATIL Trigger: AAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000529640.5 ENST00000533000.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CCA 72 bp | GGGAGAAGAGGGAACAGGACCTGGCTCTGGTGCCACTaGGGGTGGCTGAGAGCCCACACTGCCACCATACTA | + |
|
Preference number: 6 (lower is better) Translates to: GRRGNRTWLWCH*GWLRAHTATIL Trigger: TAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525717.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS TCA 72 bp | TCCCAGCTCCTGCAGAGGCCGCTCCATGTCAGCTTCTaGGAAGGCCCGTCTGGGGAAGCCACTGAGCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: SQLLQRPLHVSF*EGPSGEATEQL Trigger: CAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000301935.10 ENST00000525717.5 ENST00000529640.5 ENST00000533476.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS TCA 72 bp | ACCCAGCTCCTGCAGAGGCCGCTCCATGTCAGCTTCTaGGAAGGCCCGTCTGGGGAAGCCACTGAGCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: TQLLQRPLHVSF*EGPSGEATEQL Trigger: CAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294119.6 ENST00000532904.5 |
||
| CDS TCA 72 bp | GGACCCTCAGTCAGGACCTTCAAGGCCGCCTTGCTCTaGGGAAGTGGGCTCCCGTCCCAGGATATGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPSVRTFKAALL*GSGLPSQDMSK Trigger: CTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGTCCTGACTGAGGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531056.5 ENST00000531625.1 |
||
| CDS GCA 72 bp | GCTGTCGTGCTGCTGACAACTCTTGCCCTTGTCTCCTaGGCTGCCGTTCCCGTTCCAATGCCTCCCGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AVVLLTTLALVS*AAVPVPMPPVP Trigger: AGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS GCA 72 bp | ACCGTGGACCCTCAGTCAGGACCTTCAAGGCCGCCTTaGTCTGAGGAAGTGGGCTCCCGTCCCAGGATATGT | + |
|
Preference number: 6 (lower is better) Translates to: TVDPQSGPSRPP*SEEVGSRPRIC Trigger: ACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGTCCTGACTGAGGGTCCACGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531056.5 ENST00000531625.1 |
||
| CDS CCA 72 bp | TCCCGTTCCTCTCTTTCTTCACGCTCCCGCTGCTTCTaGGCCACCAGCTCCAACATCCAGTCCATCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSLSSRSRCF*ATSSNIQSIAA Trigger: GGCTGCGATGGACTGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616865.4 |
||
| CDS TCA 72 bp | GGCAGCAGAACCAGATCCTTCAAGGCCGCCTTGCTCTaGGGAAGTGGGCTCCCGTCCCAGGATATGTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSRTRSFKAALL*GSGLPSQDMSK Trigger: CTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS GCA 72 bp | CGTGCTGCTGACAACTCTTGCCCTTGTCTCCTGCGCTaGCGTTCCCGTTCCAATGCCTCCCGTTCCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RAADNSCPCLLR*RSRSNASRSSL Trigger: AAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGCAGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CAA 72 bp | AGCCTGACCTGTATGCGACACTGGTCATACTCCCGCTaGGTGGGAGGCTCCTGGCTTCTTGGCTCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLTCMRHWSYSR*VGGSWLLGSLC Trigger: GCAGAGAGAGCCAAGAAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524762.5 |
||
| CDS GCA 72 bp | TCTTCCTGTAGCCGCTGTCGTGCTGCTGACAACTCTTaGCCTTGTCTCCTGCGCTGCCGTTCCCGTTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSCSRCRAADNS*PCLLRCRSRSN Trigger: ATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS GCA 72 bp | GTCCTGGTTTCTAGTCTTGCAGCCATACCCAGCTCCTaGAGAGGCCGCTCCATGTCAGCTTCTGAGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLVSSLAAIPSS*RGRSMSASEKA Trigger: GGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGGTATGGCTGCAAGACTAGAAACCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000294119.6 ENST00000532904.5 |
||
| CDS GCA 72 bp | AATGCCTCCCGTTCCTCTCTTTCTTCACGCTCCCGCTaGTTCTGGGCCACCAGCTCCAACATCCAGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: NASRSSLSSRSR*FWATSSNIQSI Trigger: GATGGACTGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616865.4 |
||
| CDS CCA 72 bp | TCTCATCTGCTATCCATCATTTCCCCTGCCCAGACCTaGCTGCTAACTCCTCGGCCTTTTCCCTCCGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SHLLSIISPAQT*LLTPRPFPSAS Trigger: AGAGGCGGAGGGAAAAGGCCGAGGAGTTAGCAGCCAGGTCTGGGCAGGGGAAATGATGGATAGCAGATGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533908.5 |
||
| CDS GCA 72 bp | AATGCCTCCCGTTCCTCTCTTTCTTCACGCTCCCGCTaGTTCTGGGCCACCAGCTCCAACATCCTCTTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: NASRSSLSSRSR*FWATSSNILLV Trigger: AACTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS CAA 72 bp | GGACAATGGGACAAAGGCCCTCAGCTGGGACATTTCTaGGCCACAATGAGAACAGCAGAAGGCACGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GQWDKGPQLGHF*ATMRTAEGTSP Trigger: GGGACTCGTGCCTTCTGCTGTTCTCATTGTGGCCAAGAAATGTCCCAGCTGAGGGCCTTTGTCCCATTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000301935.10 ENST00000525717.5 ENST00000529640.5 ENST00000533476.5 ENST00000616865.4 |
||
| CDS GCA 72 bp | CTGGCCTTGCACCATGTTCACAAAGCCCCTTCTCTTTaGATCCCTCCTTTTCCTAGGCATGCCTCCCTACTC | + |
|
Preference number: 6 (lower is better) Translates to: LALHHVHKAPSL*IPPFPRHASLL Trigger: GAGTAGGGAGGCATGCCTAGGAAAAGGAGGGATGCAAAGAGAAGGGGCTTTGTGAACATGGTGCAAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000294119.6 ENST00000532904.5 |
||
| CDS CAA 90 bp | CTGCCCACTCCATTACCCGTGGCGTCTTCTCAGTCACCTACCTTCTaGGCTCTCTCTGCTTTGTCCCTCTCGATCTTTTCTCTAACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPTPLPVASSQSPTF*ALSALSLSIFSLTL Trigger: AAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGGTAGGTGACTGAGAAGACGCCACGGGTAATGGAGTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS GCA 72 bp | TTTGTTCCTGTCTTTCCTCTTCACTCAAAGCGGGTTTaGCTTCTCCGGCAGCAGAACCAGATCCTTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FVPVFPLHSKRV*LLRQQNQILQG Trigger: GCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000436354.2 ENST00000524762.5 ENST00000525004.5 ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000528907.5 ENST00000529640.5 ENST00000532904.5 ENST00000533476.5 ENST00000533908.5 ENST00000534176.1 |
||
| CDS CCA 72 bp | CATTACCCGTGGCGTCTTCTCAGTCACCTACCTTCTTaGCTCTCTCTGCTTTGTCCCTCTCGATCTTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HYPWRLLSHLPS*LSLLCPSRSFL Trigger: GAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGGTAGGTGACTGAGAAGACGCCACGGGTAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CAA 72 bp | CCATTACCCGTGGCGTCTTCTCAGTCACCTACCTTCTaGGCTCTCTCTGCTTTGTCCCTCTCGATCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLPVASSQSPTF*ALSALSLSIFS Trigger: AGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGGTAGGTGACTGAGAAGACGCCACGGGTAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS GCA 72 bp | TGCTTTCCCTCTGAAGCTGGAAAAGATTTACTAACCTaGCCACTCCATTACCCGTGGCGTCTTCTCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CFPSEAGKDLLT*PLHYPWRLLSH Trigger: GTGACTGAGAAGACGCCACGGGTAATGGAGTGGGCAGGTTAGTAAATCTTTTCCAGCTTCAGAGGGAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000525717.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS CCA 72 bp | AAGATAAGAATTAGAATCAGTACCTGTATGCGACACTaGTCATACTCCCGCTTGGTGGGAGGCTCCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KIRIRISTCMRH*SYSRLVGGSWL Trigger: CAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTACTGATTCTAATTCTTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532904.5 ENST00000533476.5 |
||
| CDS TCA 72 bp | CCAAGAAAGAGGAAATGTGGAAAGGTCAAGGTTCTTTaGCCAGACGTGTACTGGGGAGAGATGGAAGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRKRKCGKVKVL*PDVYWGEMEDD Trigger: GTCGTCTTCCATCTCTCCCCAGTACACGTCTGGTCAAAGAACCTTGACCTTTCCACATTTCCTCTTTCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS TCA 72 bp | GTATTATTATCCCTTCAGATTCTCCTCGGACCCTCCTaGATAATCACACCGTGGACCCTCAGTCAGGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: VLLSLQILLGPS*IITPWTLSQDL Trigger: AAGGTCCTGACTGAGGGTCCACGGTGTGATTATTCAGGAGGGTCCGAGGAGAATCTGAAGGGATAATAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531056.5 |
||
| CDS GCA 72 bp | TTTGTTCCTGTCTTTCCTCTTCACTCAAAGCGGGTTTaGCTTCTCCGGCAGCAGAACCAGATCCTACAAACA | + |
|
Preference number: 6 (lower is better) Translates to: FVPVFPLHSKRV*LLRQQNQILQT Trigger: TGTTTGTAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531056.5 |
||
| CDS CCA 72 bp | TCAAGGTTCTTTGACCAGACGTGTACTGGGGAGAGATaGAAGACGACCCTCAGACACGTGAGATTGTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRFFDQTCTGER*KTTLRHVRLLL Trigger: TAACAACAATCTCACGTGTCTGAGGGTCGTCTTCCATCTCTCCCCAGTACACGTCTGGTCAAAGAACCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS CAA 72 bp | CCCACACTGCCACCATACTTCTTGGCTCTCTCTGCTTaGTCCCTCTCGATCTTTTCTCTAACTCTTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PTLPPYFLALSA*SLSIFSLTLCL Trigger: CAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000294119.6 ENST00000301935.10 ENST00000533000.5 ENST00000534176.1 ENST00000616865.4 |
||
| CDS CAA 72 bp | CCCACACTGCCACCATACTTCTTGGCTCTCTCTGCTTaGTCCCTCTCGATCTTTTCTCTAACTCTTTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTLPPYFLALSA*SLSIFSLTLCS Trigger: GGAACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529640.5 |
||
| CDS CAA 90 bp | ACGTGTACTGGGGAGAGATGGAAGACGACCCTCAGACACGTGAGATaGTTGTTACTGTACCTCTTAGTTTGTTCCTGTCTTTCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TCTGERWKTTLRHVR*LLLYLLVCSCLSSS Trigger: TGAAGAGGAAAGACAGGAACAAACTAAGAGGTACAGTAACAACAATCTCACGTGTCTGAGGGTCGTCTTCCATCTCTCCCCAGTACACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS CAA 90 bp | AAAGAAAATGCCAAGAAAGAGGAAATGTGGAAAGGTCAAGGTTCTTaGACCAGACGTGTACTGGGGAGAGATGGAAGACGACCCTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: KENAKKEEMWKGQGS*TRRVLGRDGRRPSD Trigger: GTCTGAGGGTCGTCTTCCATCTCTCCCCAGTACACGTCTGGTCAAAGAACCTTGACCTTTCCACATTTCCTCTTTCTTGGCATTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS CAA 72 bp | GGGGAGAGATGGAAGACGACCCTCAGACACGTGAGATaGTTGTTACTGTACCTCTTAGTTTGTTCCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GERWKTTLRHVR*LLLYLLVCSCL Trigger: AAGACAGGAACAAACTAAGAGGTACAGTAACAACAATCTCACGTGTCTGAGGGTCGTCTTCCATCTCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS TCA 72 bp | AGGGAGATACTCAGTATTGTGGGCATCAAAACTGAATaGGGTGCCCAAGTAAGGAAAAGAGCTAAAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: REILSIVGIKTE*GAQVRKRAKAG Trigger: CCCAGCTTTAGCTCTTTTCCTTACTTGGGCACCTCATTCAGTTTTGATGCCCACAATACTGAGTATCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000532904.5 ENST00000533476.5 |
||
| CDS CAA 72 bp | GAGAGATGGAAGACGACCCTCAGACACGTGAGATTGTaGTTACTGTACCTCTTAGTTTGTTCCTGTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERWKTTLRHVRL*LLYLLVCSCLS Trigger: GGAAAGACAGGAACAAACTAAGAGGTACAGTAACAACAATCTCACGTGTCTGAGGGTCGTCTTCCATCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436354.2 ENST00000528907.5 |
||
| CDS CAA 72 bp | TCTTCTCAGTCACCTACCTTCTTGGCTCTCTCTGCTTaGTCCCTCTCGATCTTTTCTCTAACTCTTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSQSPTFLALSA*SLSIFSLTLCL Trigger: CAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGGTAGGTGACTGAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000525717.5 ENST00000526919.5 ENST00000527421.5 ENST00000532904.5 ENST00000533476.5 |
||
| CDS TCA 72 bp | AGAGAGAGGTATGGGTTTAAATACAACTGGGGCAGGTaGAATTTGATACCTTTCCCAAGAGTAGAGATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RERYGFKYNWGR*NLIPFPRVEIG Trigger: TCCTATCTCTACTCTTGGGAAAGGTATCAAATTTCACCTGCCCCAGTTGTATTTAAACCCATACCTCTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532904.5 ENST00000533476.5 |
||