RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBTF (Homo sapiens)

Ensembl gene IDs: ENSG00000108312

Ensembl transcript IDs: ENST00000302904.8, ENST00000343638.9, ENST00000393606.7, ENST00000436088.6, ENST00000526094.5, ENST00000527034.5, ENST00000529042.1, ENST00000529373.1, ENST00000529383.5, ENST00000529947.1, ENST00000533177.5, ENST00000537550.1

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGACCCACCAGCCTCTCTGGGACCAGGGCCCTTCACCGTTCTTaGTCCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTG +
Preference number: 1 (lower is better)
Translates to: EGPTSLSGTRALHRS*STSAAEFPLFPHSL
Trigger: CAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCCCTGGTCCCAGAGAGGCTGGTGGGTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR GCA 90 bp CTCCCCACCCCCAGCACCAAGGTCCAAGGCAAAGCAGAGACTGTCTaGCTTCCTTTGGGAGAGGGACCCACCAGCCTCTCTGGGACCAGG +
Preference number: 1 (lower is better)
Translates to: LPTPSTKVQGKAETV*LPLGEGPTSLSGTR
Trigger: CCTGGTCCCAGAGAGGCTGGTGGGTCCCTCTCCCAAAGGAAGGCAGACAGTCTCTGCTTTGCCTTGGACCTTGGTGCTGGGGGTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR GCA 90 bp AGACTGGGCAAAACAGAGGATGTGGAGAACGGGGCAGCCTCAGCCTaGTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTT +
Preference number: 1 (lower is better)
Translates to: RLGKTEDVENGAASA*SHQGQHLPALTDPF
Trigger: AAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR TCA 90 bp TCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTaGCTCTGGCAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGG +
Preference number: 1 (lower is better)
Translates to: SAFLLDNGDQQLGCM*LWQREPGLGSIREW
Trigger: CCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 90 bp AGCTTCACACCATCTTGCCTGCCTTTCCGCCTTCCTGCTGGACAATaGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCC +
Preference number: 1 (lower is better)
Translates to: SFTPSCLPFRLPAGQ*RPAARMHVTLAEGA
Trigger: GGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 90 bp ACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGTCTaGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAA +
Preference number: 1 (lower is better)
Translates to: TSSSDACDSGRGSLV*EASENGFSTLPLME
Trigger: TTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR GCA 90 bp ACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTTCCTaGTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGC +
Preference number: 1 (lower is better)
Translates to: TSFKLHTILPAFPPS*WTMETSSSDACDSG
Trigger: GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 90 bp AGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTTCCTGCTaGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGA +
Preference number: 1 (lower is better)
Translates to: SFKLHTILPAFPPSC*TMETSSSDACDSGR
Trigger: TCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR TCA 90 bp CTGGGTCCTTGGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGGTaGTTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAG +
Preference number: 1 (lower is better)
Translates to: LGPWPTCLGEWEGHR*FSPLYRSDYSTKAQ
Trigger: CTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR GCA 90 bp GGAGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTaGCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: GDLFHQIQALSFTPS*LPFRLPAGQWRPAA
Trigger: AGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CAA 90 bp AGAGGGACCCACCAGCCTCTCTGGGACCAGGGCCCTTCACCGTTCTaGCTCCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTT +
Preference number: 2 (lower is better)
Translates to: RGTHQPLWDQGPSPF*LHLRGRVPALPPFL
Trigger: AAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCCCTGGTCCCAGAGAGGCTGGTGGGTCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGATAGTTGCTGTCCCTaGAGGAGGACCCCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: PPSCWTMETSSSDACDSGDSCCP*RRTPKG
Trigger: GCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGATAGTTGCTGTCCCTaGAGGAGGACCCCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPDSCCP*RRTPKG
Trigger: GCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
3UTR-3UTR TCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTCAGTGCCTGTTTTCTTaGAGGCACCGACCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLQCLFS*RHRPSS
Trigger: GGAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTG...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAATTGGGCCGCAGGTGTaGAGGGCCTCATCAAACTCT +
Preference number: 2 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPIGPQV*RASSNS
Trigger: AGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAAT...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGGAAGCATCCGAGAATaGCTTCAGCACACTCCCCCT +
Preference number: 2 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPGSIRE*LQHTPP
Trigger: AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGTCTaGGAAGCATCCGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: PPSCWTMETSSSDACDSGRGSLV*EASENG
Trigger: GCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCT...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR TCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGACAGTGCCTGTTTTCTTaGAGGCACCGACCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRQCLFS*RHRPSS
Trigger: GGAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTG...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR TCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGTCCCTCTCCCAGAAATaGCAACAGAGACGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: WTMETSSSDACDSGRGSLSLSQK*QQRRQP
Trigger: CGGCTGCCGTCTCTGTTGTCATTTCTGGGAGAGGGA...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGCCAGGCTGGTCCGGTaGTGGCTTAGTCTGATAGTT +
Preference number: 2 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPARLVR*WLSLIV
Trigger: AACTATCAGACTAAGCCAGCACCGGACCAGCCTGGC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
3UTR-3UTR CCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGATTGGGCCGCAGGTGTaGAGGGCCTCATCAAACTCT +
Preference number: 2 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMIGPQV*RASSNS
Trigger: AGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAAT...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTTTTCCGCCTTCCTGCTaGACAATGGAGACCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLFPPSC*TMETSS
Trigger: GCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAA...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR GCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGCCAGGCTGGTCCGGTaGTGGCTTAGTCTGATAGTT +
Preference number: 2 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRARLVR*WLSLIV
Trigger: AACTATCAGACTAAGCCAGCACCGGACCAGCCTGGC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTCCACAGCTGCACCCATaGTATGTACAGGAACACACA +
Preference number: 2 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPPQLHP*YVQEHT
Trigger: TGTGTGTTCCTGTACATAGCATGGGTGCAGCTGTGG...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR GCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTAGCTTCACACCATCTTaGCTGCCTTTCCGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLSFTPS*LPFRLP
Trigger: AGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCT...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR GCA 90 bp GTCCTTGGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACAAGGGTGATAGTGGCTaGGGACGGTGGCTCAAGCCT +
Preference number: 2 (lower is better)
Translates to: VLGQPALVSGKDTGDSLHKGDSG*GRWLKP
Trigger: AGGCTTGAGCCACCGTCCGCAGCCACTATCACCCTT...GTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGCAAAACAGAGGATGTaGAGAACGGGGCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: WTMETSSSDACDSGRGSLAKQRM*RTGQPQ
Trigger: CTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGC...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGATAGTTGCTGTCCCTaGAGGAGGACCCCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQDSCCP*RRTPKG
Trigger: GCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAAGGCTGGTCCGGTGCTaGCTTAGTCTGATAGTTGCT +
Preference number: 2 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGRLVRC*LSLIVA
Trigger: AGCAACTATCAGACTAAGCCAGCACCGGACCAGCCT...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR TCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGTCCCTCTCCCAGAAATaGCAACAGAGACGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQSLSQK*QQRRQP
Trigger: CGGCTGCCGTCTCTGTTGTCATTTCTGGGAGAGGGA...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR GCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGACCACAGCTGCACCCATaGTATGTACAGGAACACACA +
Preference number: 2 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGPQLHP*YVQEHT
Trigger: TGTGTGTTCCTGTACATAGCATGGGTGCAGCTGTGG...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACATTGGGCCGCAGGTGTaGAGGGCCTCATCAAACTCT +
Preference number: 2 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDIGPQV*RASSNS
Trigger: AGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAAT...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGAATGGAATCAGAGACTaGGCAAAACAGAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMNGIRD*AKQRMW
Trigger: CCACATCCTCTGTTTTGCCCAGTCTCTGATTCCATT...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGCTTCCTGCTGGACAATaGAGACCAGCAGCTCGGATG +
Preference number: 2 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQLPAGQ*RPAARM
Trigger: CATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAG...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGAATGGAATCAGAGACTaGGCAAAACAGAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: WTMETSSSDACDSGRGSLNGIRD*AKQRMW
Trigger: CCACATCCTCTGTTTTGCCCAGTCTCTGATTCCATT...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp ACAGGTGATTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGTAGTCCCAGTGCTTTaGGAGGCCGAGGTGGGCGGA +
Preference number: 2 (lower is better)
Translates to: TGDSLHFTDLTTQPKHRGVVPVL*EAEVGG
Trigger: TCCGCCCACCTCGGCCTCCCAAAGCACTGGGACTAC...CCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR GCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGCCAGGCTGGTCCGGTaGTGGCTTAGTCTGATAGTT +
Preference number: 2 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYARLVR*WLSLIV
Trigger: AACTATCAGACTAAGCCAGCACCGGACCAGCCTGGC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTGGTGGCAGGCCCCTCTaGGAAGGAATGGGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPGGRPL*EGMGLP
Trigger: GGGAAGACCCATTCCTTCCCAGAGGGGCCTGCCACC...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCACAACAAACTGATGTaGGCTCTAGGACAGACCCCT +
Preference number: 2 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDHNKLM*ALGQTP
Trigger: AGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGCCATCCCGTGGTCCCAGATaGGGGAGGAAAAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: HFTDLTTQPKHRGEAQRPSRGPR*GRKRQS
Trigger: AGACTGCCTTTTCCTCCCCCATCTGGGACCACGGGA...TGGCCTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CCA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGCTAGGAGAGGTCCCGTaGTCCCAGATGGGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKLGEVP*SQMGEE
Trigger: TTCCTCCCCCATCTGGGACCACGGGACCTCTCCTAG...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR TCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACACAGTGCCTGTTTTCTTaGAGGCACCGACCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTQCLFS*RHRPSS
Trigger: GGAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTG...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR TCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCAGCTCGGATGCATGTaGCTCTGGCAGAGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPQLGCM*LWQREP
Trigger: AGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTGATAGTTGCTGTCCCTaGAGGAGGACCCCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPDSCCP*RRTPKG
Trigger: GCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATC...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGAAAGGAAATAGGGGGTaGTGGGAGGATTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQKGNRG*WEDSRK
Trigger: CTTCCTTGAATCCTCCCACCACCCCCTATTTCCTTT...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAACTACAGAGATAAGGTaGCTTGGCTTATTAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRTTEIR*LGLLRV
Trigger: GACTCTTAATAAGCCAAGCCACCTTATCTCTGTAGT...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTGGTGGCAGGCCCCTCTaGGAAGGAATGGGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFGGRPL*EGMGLP
Trigger: GGGAAGACCCATTCCTTCCCAGAGGGGCCTGCCACC...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTAGAGGGAGCCTGGTCTaGGAAGCATCCGAGAATGGC +
Preference number: 2 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFRGSLV*EASENG
Trigger: GCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCT...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGTCTTTGCAGGGCTCTTaGGAAGAAATAGAACCTATA +
Preference number: 2 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQSLQGS*EEIEPI
Trigger: TATAGGTTCTATTTCTTCCCAAGAGCCCTGCAAAGA...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR TCA 90 bp CAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACTTTACAGATCTTCTACTTACTGTGTaGCCTTGGGCAAGTTACTTA +
Preference number: 2 (lower is better)
Translates to: QPALVSGKDTGDSLHFTDLLLTV*PWASYL
Trigger: TAAGTAACTTGCCCAAGGTCACACAGTAAGTAGAAG...ATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCACAACAAACTGATGTaGGCTCTAGGACAGACCCCT +
Preference number: 2 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPHNKLM*ALGQTP
Trigger: AGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTGGAAGCATCCGAGAATaGCTTCAGCACACTCCCCCT +
Preference number: 2 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFGSIRE*LQHTPP
Trigger: AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCC...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTAATGGAATCAGAGACTaGGCAAAACAGAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPNGIRD*AKQRMW
Trigger: CCACATCCTCTGTTTTGCCCAGTCTCTGATTCCATT...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR TCA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGAGGAAAAGGCAGTCTaGTTTGGATTCTTCTACTTA +
Preference number: 2 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKEEKAV*FGFFYL
Trigger: TAAGTAGAAGAATCCAAATCAGACTGCCTTTTCCTC...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CCA 90 bp CACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGCCAAAAGGCAGTCTGATTTaGATTCTTCTACTTACTGTG +
Preference number: 2 (lower is better)
Translates to: HFTDLTTQPKHRGEAQRPKGSLI*ILLLTV
Trigger: CACAGTAAGTAGAAGAATCCAAATCAGACTGCCTTT...TGGCCTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR GCA 72 bp ACCAGCCTCTCTGGGACCAGGGCCCTTCACCGTTCTTaGTCCACCTCCGCGGCAGAGTTCCCGCTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: TSLSGTRALHRS*STSAAEFPLFP
Trigger: GGGGAAGAGCGGGAACTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCCCTGGTCCCAGAGAGGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTCCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 3 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR GCA 72 bp AAAACAGAGGATGTGGAGAACGGGGCAGCCTCAGCCTaGTCCCACCAGGGTCAACATCTCCCGGCCCTCACC +
Preference number: 3 (lower is better)
Translates to: KTEDVENGAASA*SHQGQHLPALT
Trigger: GGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 3 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
3UTR TCA 72 bp CTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTaGCTCTGGCAGAGGGAGCCTGGTCTGGGAAGCATC +
Preference number: 3 (lower is better)
Translates to: LLDNGDQQLGCM*LWQREPGLGSI
Trigger: GATGCTTCCCAGACCAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 72 bp GCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTaGTCTGGGAAGCATCCGAGAATGGCTTCAGCACAC +
Preference number: 3 (lower is better)
Translates to: AARMHVTLAEGA*SGKHPRMASAH
Trigger: GTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCAGTGCCTGTTTTCTaGAAGGCACCGACCCTCCTC +
Preference number: 3 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGAVPVF*KAPTLL
Trigger: GAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTGC...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 72 bp CCTAATGGAATCAGAGACTGGGCAAAACAGAGGATGTaGAGAACGGGGCAGCCTCAGCCTGCTCCCACCAGG +
Preference number: 3 (lower is better)
Translates to: PNGIRDWAKQRM*RTGQPQPAPTR
Trigger: CCTGGTGGGAGCAGGCTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGCCCAGTCTCTGATTCCATTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 72 bp CCATCTTGCCTGCCTTTCCGCCTTCCTGCTGGACAATaGAGACCAGCAGCTCGGATGCATGTGACTCTGGCA +
Preference number: 3 (lower is better)
Translates to: PSCLPFRLPAGQ*RPAARMHVTLA
Trigger: TGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCCACACTCACACTCTTTaGCACACATCCACAGCTGCA +
Preference number: 3 (lower is better)
Translates to: PPSCWTMETSSSDACDSGHTHTL*HTSTAA
Trigger: TGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTG...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCTGGGGTGGCCAGGCTaGGCCTCTCAGATGAACAGG +
Preference number: 3 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVLGWPG*ASQMNR
Trigger: CCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 72 bp TGGCAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATaGCTTCAGCACACTCCCCCTAATGGAATCAGAGAC +
Preference number: 3 (lower is better)
Translates to: WQREPGLGSIRE*LQHTPPNGIRD
Trigger: GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 72 bp CTTCACACCATCTTGCCTGCCTTTCCGCCTTCCTGCTaGACAATGGAGACCAGCAGCTCGGATGCATGTGAC +
Preference number: 3 (lower is better)
Translates to: LHTILPAFPPSC*TMETSSSDACD
Trigger: GTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CCA 72 bp CTGAAACAGCAAATCCCCACAGTCTTCCTGGGTCCTTaGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGG +
Preference number: 3 (lower is better)
Translates to: LKQQIPTVFLGP*PTCLGEWEGHR
Trigger: CCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGACCCAGGAAGACTGTGGGGATTTGCTGTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CAA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 3 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp ACAGGTGATTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGTGTAGTCCCAGTGCTTaGGGAGGCCGAGGTGGGCGG +
Preference number: 3 (lower is better)
Translates to: TGDSLHFTDLTTQPKHRGCSPSA*GGRGGR
Trigger: CCGCCCACCTCGGCCTCCCAAAGCACTGGGACTACA...CCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAGCAGTGCCTGTTTTCTaGAAGGCACCGACCCTCCTC +
Preference number: 3 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTAVPVF*KAPTLL
Trigger: GAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTGC...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR TCA 72 bp TGGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGGTaGTTCTCTCCACTTTACAGATCTGACTACTCAACC +
Preference number: 3 (lower is better)
Translates to: WPTCLGEWEGHR*FSPLYRSDYST
Trigger: GGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR-3UTR CAA 90 bp AGGCTCAAACTCCTGAAACAGCAAATCCCCACAGTCTTCCTGGGTCCTTGGCCAACTTACTGTGTGACCTaGGGCAAGTTACTTAACCTC +
Preference number: 3 (lower is better)
Translates to: RLKLLKQQIPTVFLGPWPTYCVT*GKLLNL
Trigger: GAGGTTAAGTAACTTGCCCAAGGTCACACAGTAAGT...TGGCCAAGGACCCAGGAAGACTGTGGGGATTTGCTGTTTCAGGAGTTTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR CCA 72 bp CACCGACCCTTTTTCCAGATTCACAACAAACTGATGTaGGCTCTAGGACAGACCCCTTTACACACACACACA +
Preference number: 3 (lower is better)
Translates to: HRPFFQIHNKLM*ALGQTPLHTHT
Trigger: TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAATCTGGAAAAAGGGTCGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTaGCACACATCCACAGCTGCA +
Preference number: 3 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTHTHTL*HTSTAA
Trigger: TGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTG...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR-3UTR CAA 90 bp AGGCTCAAACTCCTGAAACAGCAAATCCCCACAGTCTTCCTGGGTCCTTGGCCAAAAAGGCAGTCTGATTaGGATTCTTCTACTTACTGT +
Preference number: 3 (lower is better)
Translates to: RLKLLKQQIPTVFLGPWPKRQSD*DSSTYC
Trigger: ACAGTAAGTAGAAGAATCCAAATCAGACTGCCTTTT...TGGCCAAGGACCCAGGAAGACTGTGGGGATTTGCTGTTTCAGGAGTTTGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR TCA 72 bp GGAAGGACACAGGTGATTCTCTCCACTTTACAGATCTaGCTACTCAACCAAAGCACAGAGGGGAAGCACAAA +
Preference number: 3 (lower is better)
Translates to: GRTQVILSTLQI*LLNQSTEGKHK
Trigger: TTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCCTCCTCGGTCGTGCTaGCCGGGCAACCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPPPRSC*PGNPGS
Trigger: TGACCCCGGGTTGCCCGGCCAGCACGACCGAGGAGG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCGGCTTCCTCTCCGACTaGGCCTTGAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPGFLSD*ALSAAS
Trigger: AGAGGCGGCGCTCAAGGCTCAGTCGGAGAGGAAGCC...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCACCCACCAGCCTCTCTaGGACCAGGGCCCTTCACCG +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPTHQPL*DQGPSP
Trigger: CGGTGAAGGGCCCTGGTCCCAGAGAGGCTGGTGGGT...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCGGGGTGATCCTCCCTaGATCGGGCCAGGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPRGDPP*IGPGFA
Trigger: AGCGAAACCTGGCCCGATTCAGGGAGGATCACCCCG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTGGATTAGGTCGGGGTaGTCCTCCCTGAATCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPWIRSG*SSLNRA
Trigger: GGCCCGATTCAGGGAGGATCACCCCGACCTAATCCA...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTCTCCTCCGAGAAGATaGACATGGCCGACACGGGCC +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPSPPRR*TWPTRA
Trigger: GGCCCGTGTCGGCCATGTTCATCTTCTCGGAGGAGA...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGCCACCTCCTCGGTCGTaGTGGCCGGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMPPPRS*WPGNPG
Trigger: CCCCGGGTTGCCCGGCCAGCACGACCGAGGAGGTGG...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCACCTCCTCGGTCGTaGTGGCCGGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPPPRS*WPGNPG
Trigger: CCCCGGGTTGCCCGGCCAGCACGACCGAGGAGGTGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCACCTCCTCGGTCGTaGTGGCCGGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPPPPRS*WPGNPG
Trigger: CCCCGGGTTGCCCGGCCAGCACGACCGAGGAGGTGG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTGCCGATCTCCACCATaGGCTCCTTCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPCRSPP*APSAAG
Trigger: ACCTGCCGCTGAAGGAGCGCATGGTGGAGATCGGCA...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTCCTCCTCGGTCGTGCTaGCCGGGCAACCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPPPRSC*PGNPGS
Trigger: TGACCCCGGGTTGCCCGGCCAGCACGACCGAGGAGG...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CAA 72 bp CACCAGCCTCTCTGGGACCAGGGCCCTTCACCGTTCTaGCTCCACCTCCGCGGCAGAGTTCCCGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: HQPLWDQGPSPF*LHLRGRVPALP
Trigger: GGGAAGAGCGGGAACTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCCCTGGTCCCAGAGAGGCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGCCGGCGAGACGGCGTaGGGCCGGAGGGGGATTTGC +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRAGETA*GRRGIC
Trigger: GCAAATCCCCCTCCGGCCTCACGCCGTCTCGCCGGC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCGTCAAACTTGTCCTTaGGCTGGCGTTCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPRQTCP*AGVRPW
Trigger: CCAAGGCCGAACGCCAGCTCAAGGACAAGTTTGACG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCCTTCATGTTGGCCATaGGCTCTGCGCAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPPSCWP*ALRSTA
Trigger: CGCTGTACTGCGCAGAGCTCATGGCCAACATGAAGG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCGCACCATGCGCTCTGTaGTGGGCACGTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPAPCAL*WARPSC
Trigger: ACATGAAGGACGTGCCCAGCACAGAGCGCATGGTGC...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTCTCGGAGCCGCCCTTaGCCCCTTCCTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPSRSRP*PLPGLA
Trigger: AGCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGA...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGGGGACTCGGGCAGCTTaGCCCGTTCCTCGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMGTRAA*PVPRAP
Trigger: GGGAGCGCGAGGAACGGGGCAAGCTGCCCGAGTCCC...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGGACTCGGGCAGCTTaGCCCGTTCCTCGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGTRAA*PVPRAP
Trigger: GGGAGCGCGAGGAACGGGGCAAGCTGCCCGAGTCCC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTACCCGAGCGTGTGGATaGGAGCGCAGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPTRACG*ERRPGA
Trigger: TGCCCCCGGCCTGCGCTCCCATCCACACGCTCGGGT...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCACCCGAGCGTGTGGATaGGAGCGCAGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPTRACG*ERRPGA
Trigger: TGCCCCCGGCCTGCGCTCCCATCCACACGCTCGGGT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343638.9
ENST00000527034.5
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCCCTCACCCGAGCGTGTaGATGGGAGCGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGPHPSV*MGAQAG
Trigger: CCCGGCCTGCGCTCCCATCCACACGCTCGGGTGAGG...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCTCACCCGAGCGTGTaGATGGGAGCGCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPPHPSV*MGAQAG
Trigger: CCCGGCCTGCGCTCCCATCCACACGCTCGGGTGAGG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343638.9
ENST00000527034.5
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCCGACTGAGCCTTaGGCGCCGCCTCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSPTEP*APPLGP
Trigger: AGGCCCGAGAGGCGGCGCTCAAGGCTCAGTCGGAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCGGAGCCGCCCTTaGCCCCTTCCTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSRSRP*PLPGLA
Trigger: AGCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCTCGGAGCCGCCCTTaGCCCCTTCCTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSRSRP*PLPGLA
Trigger: AGCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGATCTCCGACTGAGCCTTaGGCGCCGCCTCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRSPTEP*APPLGP
Trigger: AGGCCCGAGAGGCGGCGCTCAAGGCTCAGTCGGAGA...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGGGCTTCCTCTCCGACTaGGCCTTGAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMGFLSD*ALSAAS
Trigger: AGAGGCGGCGCTCAAGGCTCAGTCGGAGAGGAAGCC...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGGCTTCCTCTCCGACTaGGCCTTGAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPGFLSD*ALSAAS
Trigger: AGAGGCGGCGCTCAAGGCTCAGTCGGAGAGGAAGCC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGCTTCCTCTCCGACTaGGCCTTGAGCGCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGFLSD*ALSAAS
Trigger: AGAGGCGGCGCTCAAGGCTCAGTCGGAGAGGAAGCC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTCCCAGCACATTTCTTaGAGCCCAGGTTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPSQHIS*SPGSEP
Trigger: AGGCTCAGAACCTGGGCTTCAAGAAATGTGCTGGGA...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTGCTTCCCGCTCCCATTaGTCCATCCCCGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPASRSH*SIPAAS
Trigger: GGAGGCAGCGGGGATGGAGCAATGGGAGCGGGAAGC...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGGCTGCACAGCACCATaGGCTCTGTGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPGCTAP*ALCWAR
Trigger: ACGTGCCCAGCACAGAGCGCATGGTGCTGTGCAGCC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGCCCAAGACCCGCTGCTaGTCCTCCTCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMPKTRC*SSSGRL
Trigger: GAGCCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGG...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCCAAGACCCGCTGCTaGTCCTCCTCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPKTRC*SSSGRL
Trigger: GAGCCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTCCCCCAAGACCCGCTaGTGCTCCTCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMSPKTR*CSSSGR
Trigger: CCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGGGGA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCCCCCAAGACCCGCTaGTGCTCCTCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSPKTR*CSSSGR
Trigger: CCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGGGGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCCCCCAAGACCCGCTaGTGCTCCTCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSPKTR*CSSSGR
Trigger: CCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGGGGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTCGCTCCTCCTGCAGCTaGCGCCGTTTCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLRSSCS*RRFSSE
Trigger: CTCGGAGGAGAAACGGCGGCAGCTGCAGGAGGAGCG...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCGCTCCTCCTGCAGCTaGCGCCGTTTCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPRSSCS*RRFSSE
Trigger: CTCGGAGGAGAAACGGCGGCAGCTGCAGGAGGAGCG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCACCCAGAGGTCCAGGTaGACCTTGTACTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPTQRSR*TLYCFC
Trigger: GCAAAAGCAGTACAAGGTGCACCTGGACCTCTGGGT...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGTGGCTGCTGCCTGCTaGTCCTCGCGGCGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPVAAAC*SSRRKA
Trigger: TGCTTTTCGCCGCGAGGAGCAGCAGGCAGCAGCCAC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436088.6
CDS-3UTR CCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCATCTCGTCCTCGCTGCTaGACTCAGAGGAGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPSRPRC*TQRSRR
Trigger: GCGGCGACTCCTCTGAGTCCAGCAGCGAGGACGAGA...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTCTCGTCCTCGCTGCTaGACTCAGAGGAGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPSRPRC*TQRSRR
Trigger: GCGGCGACTCCTCTGAGTCCAGCAGCGAGGACGAGA...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCGGGGTGATCCTCCCTaGATCGGGCCAGGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPRGDPP*IGPGFA
Trigger: AGCGAAACCTGGCCCGATTCAGGGAGGATCACCCCG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGGGTGATCCTCCCTaGATCGGGCCAGGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRGDPP*IGPGFA
Trigger: AGCGAAACCTGGCCCGATTCAGGGAGGATCACCCCG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACAAAGCCACCTCACCCTaGGGAGCCGCCGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNKATSP*GAAGRA
Trigger: AGCCCTCCCGGCGGCTCCGCAGGGTGAGGTGGCTTT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCCACCTCCTCGGTCGTaGTGGCCGGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDPPPRS*WPGNPG
Trigger: CCCCGGGTTGCCCGGCCAGCACGACCGAGGAGGTGG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTGGCTGCACAGCACCATaGGCTCTGTGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPGCTAP*ALCWAR
Trigger: ACGTGCCCAGCACAGAGCGCATGGTGCTGTGCAGCC...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGCTGCACAGCACCATaGGCTCTGTGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGCTAP*ALCWAR
Trigger: ACGTGCCCAGCACAGAGCGCATGGTGCTGTGCAGCC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGGCTGCACAGCACCATaGGCTCTGTGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPGCTAP*ALCWAR
Trigger: ACGTGCCCAGCACAGAGCGCATGGTGCTGTGCAGCC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGATCCCCCAAGACCCGCTaGTGCTCCTCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRSPKTR*CSSSGR
Trigger: CCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGGGGA...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGCTCTCGTCCTCGCTaGTGGACTCAGAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRSRPR*WTQRSR
Trigger: GCGACTCCTCTGAGTCCAGCAGCGAGGACGAGAGCG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGGCCCTTCACCGTTCTTaGTCCACCTCCGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMALHRS*STSAAE
Trigger: CTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGC...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCGTCCTCGCTGCTaGACTCAGAGGAGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSRPRC*TQRSRR
Trigger: GCGGCGACTCCTCTGAGTCCAGCAGCGAGGACGAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCTCGTCCTCGCTGCTaGACTCAGAGGAGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSRPRC*TQRSRR
Trigger: GCGGCGACTCCTCTGAGTCCAGCAGCGAGGACGAGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGATAGTTGCTGTCCCTaGAGGAGGACCCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPDSCCP*RRTPKG
Trigger: GCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGGTGGCAGGCCCCTCTaGGAAGGAATGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPGGRPL*EGMGLP
Trigger: GGGAAGACCCATTCCTTCCCAGAGGGGCCTGCCACC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGTGGCAGGCCCCTCTaGGAAGGAATGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGGRPL*EGMGLP
Trigger: GGGAAGACCCATTCCTTCCCAGAGGGGCCTGCCACC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCACAACAAACTGATGTaGGCTCTAGGACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPHNKLM*ALGQTP
Trigger: AGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCTCCCTGGCTCTGAGTaGCGGCGCCCTCCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDLPGSE*RRPPPL
Trigger: GAGCGGGGGAGGGCGCCGCCACTCAGAGCCAGGGAG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436088.6
CDS-3UTR TCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGGATTAGGTCGGGGTaGTCCTCCCTGAATCGGGCC +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMWIRSG*SSLNRA
Trigger: GGCCCGATTCAGGGAGGATCACCCCGACCTAATCCA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTGGATTAGGTCGGGGTaGTCCTCCCTGAATCGGGCC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPWIRSG*SSLNRA
Trigger: GGCCCGATTCAGGGAGGATCACCCCGACCTAATCCA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTGGATTAGGTCGGGGTaGTCCTCCCTGAATCGGGCC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPWIRSG*SSLNRA
Trigger: GGCCCGATTCAGGGAGGATCACCCCGACCTAATCCA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTCTCCTCCGAGAAGATaGACATGGCCGACACGGGCC +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMSPPRR*TWPTRA
Trigger: GGCCCGTGTCGGCCATGTTCATCTTCTCGGAGGAGA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCTCCTCCGAGAAGATaGACATGGCCGACACGGGCC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSPPRR*TWPTRA
Trigger: GGCCCGTGTCGGCCATGTTCATCTTCTCGGAGGAGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCACCCGGTCATTCTTaGAGCGGGCCAGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSPGHS*SGPGSR
Trigger: GCGACTACCTGGCCCGCTTCAAGAATGACCGGGTGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATCTCCCTCCCTGGCTCTaGGTGGCGGCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYLPPWL*VAAPSP
Trigger: GGGGGAGGGCGCCGCCACTCAGAGCCAGGGAGGGAG...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436088.6
CDS-3UTR GCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTTGCTCCATCCCCGCTaGCTCCTGCCTCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMLLHPR*LLPPAS
Trigger: AGAAGCAGGAGGCAGGAGGCAGCGGGGATGGAGCAA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTGCCGATCTCCACCATaGGCTCCTTCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPCRSPP*APSAAG
Trigger: ACCTGCCGCTGAAGGAGCGCATGGTGGAGATCGGCA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTGCCGATCTCCACCATaGGCTCCTTCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPCRSPP*APSAAG
Trigger: ACCTGCCGCTGAAGGAGCGCATGGTGGAGATCGGCA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGACGCTCTCGTCCTCGCTaGTGGACTCAGAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGRSRPR*WTQRSR
Trigger: GCGACTCCTCTGAGTCCAGCAGCGAGGACGAGAGCG...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTGGGACCAACGGTCTTaGCCTTTGGGGGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPWDQRS*PLGAAI
Trigger: AATGGCCGCCCCCAAAGGCCAAGACCGTTGGTCCCA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTGGGACCAACGGTCTTaGCCTTTGGGGGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPWDQRS*PLGAAI
Trigger: AATGGCCGCCCCCAAAGGCCAAGACCGTTGGTCCCA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTGTTCGGAGGTGGCTTaGTGGGTCGCCCGTCAAACT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPCSEVA*WVARQT
Trigger: AGTTTGACGGGCGACCCACCAAGCCACCTCCGAACA...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGTCAAACTTGTCCTTaGGCTGGCGTTCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRQTCP*AGVRPW
Trigger: CCAAGGCCGAACGCCAGCTCAAGGACAAGTTTGACG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCTTCATGTTGGCCATaGGCTCTGCGCAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPSCWP*ALRSTA
Trigger: CGCTGTACTGCGCAGAGCTCATGGCCAACATGAAGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCTTCATGTTGGCCATaGGCTCTGCGCAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPPSCWP*ALRSTA
Trigger: CGCTGTACTGCGCAGAGCTCATGGCCAACATGAAGG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCAGTGCCTGTTTTCTTaGAGGCACCGACCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPQCLFS*RHRPSS
Trigger: GGAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR TCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTTCCCTCTCCCAGAAATaGCAACAGAGACGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPSLSQK*QQRRQP
Trigger: CGGCTGCCGTCTCTGTTGTCATTTCTGGGAGAGGGA...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGCTTGGCCTCTCAGATaGACAGGGGAGACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPAWPLR*TGETFS
Trigger: GGAAAAGGTCTCCCCTGTTCATCTGAGAGGCCAAGC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACATCCCCGCTGCCTCCTaGCTCCTGCTTCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNIPAAS*LLLLSC
Trigger: GCAGGAGAGAAGCAGGAGGCAGGAGGCAGCGGGGAT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGGCCGGAGGGGGATTTaGAAGGAAACCTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGGRRGI*KETCLL
Trigger: AAGCAGGCAGGTTTCCTTGCAAATCCCCCTCCGGCC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCACCATGCGCTCTGTaGTGGGCACGTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPAPCAL*WARPSC
Trigger: ACATGAAGGACGTGCCCAGCACAGAGCGCATGGTGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGCACCATGCGCTCTGTaGTGGGCACGTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPAPCAL*WARPSC
Trigger: ACATGAAGGACGTGCCCAGCACAGAGCGCATGGTGC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACGGCTGCACAGCACCATaGGCTCTGTGCTGGGCACGT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNGCTAP*ALCWAR
Trigger: ACGTGCCCAGCACAGAGCGCATGGTGCTGTGCAGCC...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGACTCCGACTTGGACTaGAGAGTAGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPDSDLD*RVVRLD
Trigger: ATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGCCAGGCTGGTCCGGTaGTGGCTTAGTCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPARLVR*WLSLIV
Trigger: AACTATCAGACTAAGCCAGCACCGGACCAGCCTGGC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGCCTTTCCGCCTTCCTaGTGGACAATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGAFPPS*WTMETS
Trigger: GCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGATGGGACCAACGGTCTTaGCCTTTGGGGGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGWDQRS*PLGAAI
Trigger: AATGGCCGCCCCCAAAGGCCAAGACCGTTGGTCCCA...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGTTCGGAGGTGGCTTaGTGGGTCGCCCGTCAAACT +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMCSEVA*WVARQT
Trigger: AGTTTGACGGGCGACCCACCAAGCCACCTCCGAACA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTGTTCGGAGGTGGCTTaGTGGGTCGCCCGTCAAACT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPCSEVA*WVARQT
Trigger: AGTTTGACGGGCGACCCACCAAGCCACCTCCGAACA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTGTTCGGAGGTGGCTTaGTGGGTCGCCCGTCAAACT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPCSEVA*WVARQT
Trigger: AGTTTGACGGGCGACCCACCAAGCCACCTCCGAACA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCATGCGCTCTGTGCTaGGCACGTCCTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPPCALC*ARPSCW
Trigger: CCAACATGAAGGACGTGCCCAGCACAGAGCGCATGG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCATGCGCTCTGTGCTaGGCACGTCCTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPCALC*ARPSCW
Trigger: CCAACATGAAGGACGTGCCCAGCACAGAGCGCATGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACGGTGGCAGGCCCCTCTaGGAAGGAATGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNGGRPL*EGMGLP
Trigger: GGGAAGACCCATTCCTTCCCAGAGGGGCCTGCCACC...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCATCCAAATAGGAAACTaGGGTTCTTTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPIQIGN*GSLQGS
Trigger: AGAGCCCTGCAAAGAACCCCAGTTTCCTATTTGGAT...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAAGACAAAGCCCGAGATaGCGAAGCGGAGCGACGGCT +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRRQSPR*RSGATA
Trigger: AGCCGTCGCTCCGCTTCGCCATCTCGGGCTTTGTCT...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS-3UTR CCA 90 bp GTCCTTGGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACGTAGTCCCAGTGCTTTaGGAGGCCGAGGTGGGCGGA +
Preference number: 4 (lower is better)
Translates to: VLGQPALVSGKDTGDSLHVVPVL*EAEVGG
Trigger: TCCGCCCACCTCGGCCTCCCAAAGCACTGGGACTAC...GTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACTCACCCGGTCATTCTTaGAGCGGGCCAGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNSPGHS*SGPGSR
Trigger: GCGACTACCTGGCCCGCTTCAAGAATGACCGGGTGA...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTCCAACACCCCCACCCTaGCAGTCCTGTTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLPTPPP*QSCLYC
Trigger: ACAGTACAAACAGGACTGTCAGGGTGGGGGTGTTGG...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCCGGCCAAGCCCAGCTaGCTAGAGCGAGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDPAKPS*LERAPL
Trigger: GAGTGGAGCTCGCTCTAGGCAGCTGGGCTTGGCCGG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTAAGCCAGCCAAGCTCTaGAGCGCCCGACCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVKPAKL*SARPGR
Trigger: ACGCCCGGGTCGGGCGCTGCAGAGCTTGGCTGGCTT...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGCACCATGCGCTCTGTaGTGGGCACGTCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLAPCAL*WARPSC
Trigger: ACATGAAGGACGTGCCCAGCACAGAGCGCATGGTGC...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGCCCAAGACCCGCTGCTaGTCCTCCTCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQPKTRC*SSSGRL
Trigger: GAGCCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGG...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTACCCAGAGGTCCAGGTaGACCTTGTACTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPTQRSR*TLYCFC
Trigger: GCAAAAGCAGTACAAGGTGCACCTGGACCTCTGGGT...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGACTCCGACTTGGACTaGAGAGTAGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPDSDLD*RVVRLD
Trigger: ATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000533177.5
CDS-3UTR GCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGGAGGAGCTGGAGCTaGTGCCCTCGGACTCATTAT +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGRRSWS*CPRTHY
Trigger: ATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCTCCT...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCAGGAGGAGCTGGAGCTaGTGCCCTCGGACTCATTAT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPRRSWS*CPRTHY
Trigger: ATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCTCCT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAGGAGGAGCTGGAGCTaGTGCCCTCGGACTCATTAT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRRSWS*CPRTHY
Trigger: ATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCTCCT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCCAGGCTGGTCCGGTaGTGGCTTAGTCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPARLVR*WLSLIV
Trigger: AACTATCAGACTAAGCCAGCACCGGACCAGCCTGGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGCCTTTCCGCCTTCCTaGTGGACAATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRAFPPS*WTMETS
Trigger: GCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp TCGGACTCCGACTTGGACTGCAGAGTAGTCCGGCTGGATTTGGGGTTTGGGCCTGGTCCTTGGCCAACCTaGCTTGGTGAGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDSDLDCRVVRLDLGFGPGPWPT*LGEWEG
Trigger: TCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGACC...AGGCCCAAACCCCAAATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCGGACTCTTGGACTaGAGAGTAGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLGLLD*RVVRLD
Trigger: ATCCAGCCGGACTACTCTGCAGTCCAAGAGTCCGAG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527034.5
CDS-3UTR CCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACTGGGACCAACGGTCTTaGCCTTTGGGGGCGGCCATT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNWDQRS*PLGAAI
Trigger: AATGGCCGCCCCCAAAGGCCAAGACCGTTGGTCCCA...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGATGTTCGGAGGTGGCTTaGTGGGTCGCCCGTCAAACT +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGCSEVA*WVARQT
Trigger: AGTTTGACGGGCGACCCACCAAGCCACCTCCGAACA...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGCCATGCGCTCTGTGCTaGGCACGTCCTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLPCALC*ARPSCW
Trigger: CCAACATGAAGGACGTGCCCAGCACAGAGCGCATGG...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTTATGCTGCACGGTCCTaGGGAGACAGGCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLYAARS*GDRLLT
Trigger: GGTTAAGAGCCTGTCTCCCCAGGACCGTGCAGCATA...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTATGCTGCACGGTCCTaGGGAGACAGGCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPYAARS*GDRLLT
Trigger: GGTTAAGAGCCTGTCTCCCCAGGACCGTGCAGCATA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTATGCTGCACGGTCCTaGGGAGACAGGCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPYAARS*GDRLLT
Trigger: GGTTAAGAGCCTGTCTCCCCAGGACCGTGCAGCATA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGCTGGATTTGGGGTTTaGGCCTCGCAGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPAGFGV*ASQLGH
Trigger: ATGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCTGGATTTGGGGTTTaGGCCTCGCAGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPAGFGV*ASQLGH
Trigger: ATGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCATTGGGCCGCAGGTGTaGAGGGCCTCATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGIGPQV*RASSNS
Trigger: AGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAAT...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCATTGGGCCGCAGGTGTaGAGGGCCTCATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPIGPQV*RASSNS
Trigger: AGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAAT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCATTGGGCCGCAGGTGTaGAGGGCCTCATCAAACTCT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPIGPQV*RASSNS
Trigger: AGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAAT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCAAAACAGAGGATGTaGAGAACGGGGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPAKQRM*RTGQPQ
Trigger: CTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGGAAGCATCCGAGAATaGCTTCAGCACACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGGSIRE*LQHTPP
Trigger: AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCTTCCTGCTGGACAATaGAGACCAGCAGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPLPAGQ*RPAARM
Trigger: CATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGCTTGGCCTCTCAGATaGACAGGGGAGACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRAWPLR*TGETFS
Trigger: GGAAAAGGTCTCCCCTGTTCATCTGAGAGGCCAAGC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTCCCAGCACATTTCTTaGAGCCCAGGTTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMSQHIS*SPGSEP
Trigger: AGGCTCAGAACCTGGGCTTCAAGAAATGTGCTGGGA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGACCAACACCCCCACCCTaGCAGTCCTGTTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRPTPPP*QSCLYC
Trigger: ACAGTACAAACAGGACTGTCAGGGTGGGGGTGTTGG...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGACCGCCTCCATCGCTCTaGGTTTCTCTTCCAATCAGC +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGPPPSL*VSLPIS
Trigger: GCTGATTGGAAGAGAAACGCAGAGCGATGGAGGCGG...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAACCTTGTACTGCTTTTaGTGCTCCTCGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPTLYCF*CSSASF
Trigger: AAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGT...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTACCTTGTACTGCTTTTaGTGCTCCTCGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPTLYCF*CSSASF
Trigger: AAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGT...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCACCCAGAGGTCCAGGTaGACCTTGTACTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPTQRSR*TLYCFC
Trigger: GCAAAAGCAGTACAAGGTGCACCTGGACCTCTGGGT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCACCCAGAGGTCCAGGTaGACCTTGTACTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPTQRSR*TLYCFC
Trigger: GCAAAAGCAGTACAAGGTGCACCTGGACCTCTGGGT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGCGCTCTCGTCCTCGCTaGTGGACTCAGAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQRSRPR*WTQRSR
Trigger: GCGACTCCTCTGAGTCCAGCAGCGAGGACGAGAGCG...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCGCTCTCGTCCTCGCTaGTGGACTCAGAGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDRSRPR*WTQRSR
Trigger: GCGACTCCTCTGAGTCCAGCAGCGAGGACGAGAGCG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAGGAGCTGGAGCTGCTaGCCTCGGACTCATTATCTT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRSWSC*PRTHYL
Trigger: AAGATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCAGGAGCTGGAGCTGCTaGCCTCGGACTCATTATCTT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPRSWSC*PRTHYL
Trigger: AAGATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTCTTCGTAGTGGCATCTaGCCGCACTTTGAGATACAC +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPLRSGI*PHFEIH
Trigger: GTGTATCTCAAAGTGCGGCCAGATGCCACTACGAAG...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302904.8
ENST00000436088.6
CDS-3UTR CCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCATCTGGTAACCGTTCATaGGAGGCTTCTTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPSGNRS*EASWVL
Trigger: GAGAACCCAAGAAGCCTCCCATGAACGGTTACCAGA...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TCGGACTCCGACTTGGACTGCAGAGTAGTCCGGCTGGATTTGGGGTTTGGGCCTGCTGGATTTGGGGTTTaGGCCTCGCAGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SDSDLDCRVVRLDLGFGPAGFGV*ASQLGH
Trigger: ATGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGC...AGGCCCAAACCCCAAATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGAGGCTGGTCCGGTGCTaGCTTAGTCTGATAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMRLVRC*LSLIVA
Trigger: AGCAACTATCAGACTAAGCCAGCACCGGACCAGCCT...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAGGCTGGTCCGGTGCTaGCTTAGTCTGATAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPRLVRC*LSLIVA
Trigger: AGCAACTATCAGACTAAGCCAGCACCGGACCAGCCT...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAGGCTGGTCCGGTGCTaGCTTAGTCTGATAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRLVRC*LSLIVA
Trigger: AGCAACTATCAGACTAAGCCAGCACCGGACCAGCCT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGGTGGCAGGCCCCTCTaGGAAGGAATGGGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQGGRPL*EGMGLP
Trigger: GGGAAGACCCATTCCTTCCCAGAGGGGCCTGCCACC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGCAAAACAGAGGATGTaGAGAACGGGGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRAKQRM*RTGQPQ
Trigger: CTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGGAAGCATCCGAGAATaGCTTCAGCACACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLGSIRE*LQHTPP
Trigger: AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCC...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCAGAGATAAGGTGGCTTaGCTTATTAAGAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPRDKVA*LIKSQG
Trigger: TCCTTGACTCTTAATAAGCCAAGCCACCTTATCTCT...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TCGGACTCCGACTTGGACTGCAGAGTAGTCCGGCTGGATTTGGGGTTTGGGCCTTATGCTGCACGGTCCTaGGGAGACAGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: SDSDLDCRVVRLDLGFGPYAARS*GDRLKL
Trigger: GAGTTTGAGCCTGTCTCCCCAGGACCGTGCAGCATA...AGGCCCAAACCCCAAATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
3UTR CAA 72 bp TCCCCACAGTCTTCCTGGGTCCTTGGCCAACCTGCCTaGGTGAGTGGGAAGGACACAGGTGATTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPQSSWVLGQPA*VSGKDTGDSLH
Trigger: GTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGACCCAGGAAGACTGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACTGGATTAGGTCGGGGTaGTCCTCCCTGAATCGGGCC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDWIRSG*SSLNRA
Trigger: GGCCCGATTCAGGGAGGATCACCCCGACCTAATCCA...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCAGCTCGGATGCATGTaGCTCTGGCAGAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDQLGCM*LWQREP
Trigger: AGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCATTTGCAAGGAAACCTaGCTGCTTCCCGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPICKET*LLPAPI
Trigger: AATGGGAGCGGGAAGCAGGCAGGTTTCCTTGCAAAT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCCACCTCCTCGGTCGTaGTGGCCGGGCAACCCGGGG +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPPPPRS*WPGNPG
Trigger: CCCCGGGTTGCCCGGCCAGCACGACCGAGGAGGTGG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCGATAACGCTCTGTTaGCAGATCTCCTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPITLC*QISSAL
Trigger: AAGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCCCGATAACGCTCTGTTaGCAGATCTCCTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGPITLC*QISSAL
Trigger: AAGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGG...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCGATAACGCTCTGTTaGCAGATCTCCTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPPITLC*QISSAL
Trigger: AAGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCACCTTGTACTGCTTTTaGTGCTCCTCGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPTLYCF*CSSASF
Trigger: AAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCCACAGCTGCACCCATaGTATGTACAGGAACACACA +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPPQLHP*YVQEHT
Trigger: TGTGTGTTCCTGTACATAGCATGGGTGCAGCTGTGG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAAGCTTCACACCATCTTaGCTGCCTTTCCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGSFTPS*LPFRLP
Trigger: AGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCT...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTTGCAGATGCAGCTTTTaGAGACTTCTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPCRCSF*RLLAQL
Trigger: CAGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCA...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCTTGCTCATCTCAGGGTaGAGTTTCGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGLLISG*SFAYLA
Trigger: GGCCAAGTATGCGAAACTCCACCCTGAGATGAGCAA...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTTGCTCATCTCAGGGTaGAGTTTCGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLLISG*SFAYLA
Trigger: GGCCAAGTATGCGAAACTCCACCCTGAGATGAGCAA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTTGCTCATCTCAGGGTaGAGTTTCGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPLLISG*SFAYLA
Trigger: GGCCAAGTATGCGAAACTCCACCCTGAGATGAGCAA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGTTTTGGGCTTCTCTaGGATGTCCGATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGFGLL*DVRFLG
Trigger: GCCAAGAAATCGGACATCCCAGAGAAGCCCAAAACC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGCTTCGTAGTGGCATCTaGCCGCACTTTGAGATACAC +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMLRSGI*PHFEIH
Trigger: GTGTATCTCAAAGTGCGGCCAGATGCCACTACGAAG...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302904.8
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCGGGCCTTGTACTTaGCCTTCTTCTTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLGPCT*PSSSQT
Trigger: TGTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCTCGGGCCTTGTACTTaGCCTTCTTCTTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPLGPCT*PSSSQT
Trigger: TGTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAGAATTTGTAGCAGCTaGAGGTGCCCGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPRICSS*RCPHLT
Trigger: AGTGAGATGCGGGCACCTCCAGCTGCTACAAATTCT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCAGAATTTGTAGCAGCTaGAGGTGCCCGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPRICSS*RCPHLT
Trigger: AGTGAGATGCGGGCACCTCCAGCTGCTACAAATTCT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTGGTAACCGTTCATaGGAGGCTTCTTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSGNRS*EASWVL
Trigger: GAGAACCCAAGAAGCCTCCCATGAACGGTTACCAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCACAACAAACTGATGTaGGCTCTAGGACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPHNKLM*ALGQTP
Trigger: AGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGGAAATAGGGGGTGGTaGGAGGATTCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGGNRGW*EDSRKA
Trigger: AGCCTTCCTTGAATCCTCCCACCACCCCCTATTTCC...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp AGGCTCAAACTCCTGAAACAGCAAATCCCCACAGTCTTCCTGGGTCCTTGGCCATCCCCACAGTCTTCCTaGGTCCTTGGCCAACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLKLLKQQIPTVFLGPWPSPQSS*VLGQPA
Trigger: GGCAGGTTGGCCAAGGACCCAGGAAGACTGTGGGGA...TGGCCAAGGACCCAGGAAGACTGTGGGGATTTGCTGTTTCAGGAGTTTGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCATTCCCAGTCCATGTGTaGTTCGGTGGTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPFPVHV*FGGFEL
Trigger: AAGTTCAAAACCACCGAATCACACATGGACTGGGAA...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTTCCCAGTCCATGTGTaGTTCGGTGGTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPFPVHV*FGGFEL
Trigger: AAGTTCAAAACCACCGAATCACACATGGACTGGGAA...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCGTCAAACTTGTCCTTaGGCTGGCGTTCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDRQTCP*AGVRPW
Trigger: CCAAGGCCGAACGCCAGCTCAAGGACAAGTTTGACG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTTCACCCGGTCATTCTTaGAGCGGGCCAGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVSPGHS*SGPGSR
Trigger: GCGACTACCTGGCCCGCTTCAAGAATGACCGGGTGA...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCAGCTCGGATGCATGTaGCTCTGGCAGAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVQLGCM*LWQREP
Trigger: AGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAAAATGCACTCAAGAGTaGCCTCTTACAGCACCAACA +
Preference number: 4 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPKCTQE*PLTAPT
Trigger: TGTTGGTGCTGTAAGAGGTCACTCTTGAGTGCATTT...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACATCTCGGAGCCGCCCTTaGCCCCTTCCTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTSRSRP*PLPGLA
Trigger: AGCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGA...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACGCTCCTCCTGCAGCTaGCGCCGTTTCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTRSSCS*RRFSSE
Trigger: CTCGGAGGAGAAACGGCGGCAGCTGCAGGAGGAGCG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGACCGATAACGCTCTGTTaGCAGATCTCCTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGPITLC*QISSAL
Trigger: AAGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGG...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTTGTACTGCTTTTGCTaGTCCTCGGCCAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLYCFC*SSASFL
Trigger: CAAAAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR GCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGACCTTGTACTGCTTTTaGTGCTCCTCGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLTLYCF*CSSASF
Trigger: AAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGT...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp TCGGACTCCGACTTGGACTGCAGAGTAGTCCGGCTGGATTTGGGGTTTGGGCCTACCTTGTACTGCTTTTaGTGCTCCTCGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SDSDLDCRVVRLDLGFGPTLYCF*CSSASF
Trigger: AAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGT...AGGCCCAAACCCCAAATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACAGCTTCACACCATCTTaGCTGCCTTTCCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNSFTPS*LPFRLP
Trigger: AGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGATGCAGATGCAGCTTTTaGAGACTTCTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGCRCSF*RLLAQL
Trigger: CAGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCA...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGAAACTGGGGTTCTTTaGAGGGCTCTTGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPETGVL*RALGKK
Trigger: TTTCTTCCCAAGAGCCCTGCAAAGAACCCCAGTTTC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACAATCAGCCGGTCGCTTaGTGGCTCCTCCATTCTCCG +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDNQPVA*WLLHSP
Trigger: CGGAGAATGGAGGAGCCACCAAGCGACCGGCTGATT...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCCTCCTCGGTCGTGCTaGCCGGGCAACCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPPPRSC*PGNPGS
Trigger: TGACCCCGGGTTGCCCGGCCAGCACGACCGAGGAGG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGGAGCTGTCATTGGATaGAAGGTTGTTCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPGAVIG*KVVLHA
Trigger: TGCATGAAGAACAACCTTCCATCCAATGACAGCTCC...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCCATGCGCTCTGTGCTaGGCACGTCCTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDPCALC*ARPSCW
Trigger: CCAACATGAAGGACGTGCCCAGCACAGAGCGCATGG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGATCTGGTAACCGTTCATaGGAGGCTTCTTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGSGNRS*EASWVL
Trigger: GAGAACCCAAGAAGCCTCCCATGAACGGTTACCAGA...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTCTCGTCCTCGCTGCTaGACTCAGAGGAGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYSRPRC*TQRSRR
Trigger: GCGGCGACTCCTCTGAGTCCAGCAGCGAGGACGAGA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACAGAGGGAGCCTGGTCTaGGAAGCATCCGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDRGSLV*EASENG
Trigger: GCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCT...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAACCCACCAGCCTCTCTaGGACCAGGGCCCTTCACCG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTTHQPL*DQGPSP
Trigger: CGGTGAAGGGCCCTGGTCCCAGAGAGGCTGGTGGGT...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCCGGCGAGCGCGGGTTaGAAGCCAGCCAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPPASAG*KPAKLC
Trigger: GCAGAGCTTGGCTGGCTTTCAACCCGCGCTCGCCGG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR TCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACGGGGTGATCCTCCCTaGATCGGGCCAGGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTRGDPP*IGPGFA
Trigger: AGCGAAACCTGGCCCGATTCAGGGAGGATCACCCCG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGGATATAGTCTCTCATaGTCTCCTCGTACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRGYSLS*SPRTPS
Trigger: GGAAGGAGTACGAGGAGATCATGAGAGACTATATCC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302904.8
ENST00000436088.6
CDS-3UTR TCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTTCTCCGACTGAGCCTTaGGCGCCGCCTCTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPSPTEP*APPLGP
Trigger: AGGCCCGAGAGGCGGCGCTCAAGGCTCAGTCGGAGA...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCAGTGCCTGTTTTCTTaGAGGCACCGACCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVQCLFS*RHRPSS
Trigger: GGAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAAATGCACTCAAGAGTaGCCTCTTACAGCACCAACA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPKCTQE*PLTAPT
Trigger: TGTTGGTGCTGTAAGAGGTCACTCTTGAGTGCATTT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTAGTTGTGGTGGTTGTTaGATCCTACAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPSCGGC*ILQNTP
Trigger: AGGAGTGTTTTGTAGGATTCAACAACCACCACAACT...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACATCCCCCAAGACCCGCTaGTGCTCCTCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTSPKTR*CSSSGR
Trigger: CCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGGGGA...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTGCCGATCTCCACCATaGGCTCCTTCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYCRSPP*APSAAG
Trigger: ACCTGCCGCTGAAGGAGCGCATGGTGGAGATCGGCA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACGACTCCGACTTGGACTaGAGAGTAGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDDSDLD*RVVRLD
Trigger: ATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTC...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGTTAGAGACAGCTaGAGATGCAGCTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGRVRDS*RCSFCR
Trigger: TCTGCAAAAGCTGCATCTGCAGCTGTCTCTAACTCT...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGAGCTGTCATTGGATaGAAGGTTGTTCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGAVIG*KVVLHA
Trigger: TGCATGAAGAACAACCTTCCATCCAATGACAGCTCC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGGAGCTGTCATTGGATaGAAGGTTGTTCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPGAVIG*KVVLHA
Trigger: TGCATGAAGAACAACCTTCCATCCAATGACAGCTCC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCTCTCATATCGCTTTTaGTCTTCGGCTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPLSYRF*SSAAFL
Trigger: TAAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCATATCGCTTTTaGTCTTCGGCTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLSYRF*SSAAFL
Trigger: TAAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACAGAATTTGTAGCAGCTaGAGGTGCCCGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNRICSS*RCPHLT
Trigger: AGTGAGATGCGGGCACCTCCAGCTGCTACAAATTCT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGTATGCTGCACGGTCCTaGGGAGACAGGCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQYAARS*GDRLLT
Trigger: GGTTAAGAGCCTGTCTCCCCAGGACCGTGCAGCATA...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCTTCCTGCTGGACAATaGAGACCAGCAGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDLPAGQ*RPAARM
Trigger: CATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGAAAGGAAATAGGGGGTaGTGGGAGGATTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLKGNRG*WEDSRK
Trigger: CTTCCTTGAATCCTCCCACCACCCCCTATTTCCTTT...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCATCCAAATAGGAAACTaGGGTTCTTTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGIQIGN*GSLQGS
Trigger: AGAGCCCTGCAAAGAACCCCAGTTTCCTATTTGGAT...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTTCTCATGATCTCATCTaGCCGCACTTTGAGATACAC +
Preference number: 4 (lower is better)
Translates to: QREPGLGSIREWLQHTPPSHDLI*PHFEIH
Trigger: GTGTATCTCAAAGTGCGGCCAGATGAGATCATGAGA...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCATGATCTCATCTaGCCGCACTTTGAGATACAC +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSHDLI*PHFEIH
Trigger: GTGTATCTCAAAGTGCGGCCAGATGAGATCATGAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343638.9
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCTCATGATCTCATCTaGCCGCACTTTGAGATACAC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSHDLI*PHFEIH
Trigger: GTGTATCTCAAAGTGCGGCCAGATGAGATCATGAGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343638.9
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACTTTACAGATCTAGGAGAGGTCCCGTaGTCCCAGATGGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QPALVSGKDTGDSLHFTDLGEVP*SQMGEE
Trigger: TTCCTCCCCCATCTGGGACCACGGGACCTCTCCTAG...ATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATCAGTGCCTGTTTTCTTaGAGGCACCGACCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYQCLFS*RHRPSS
Trigger: GGAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTG...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACAGCTCGGATGCATGTaGCTCTGGCAGAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTQLGCM*LWQREP
Trigger: AGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCCAACACCCCCACCCTaGCAGTCCTGTTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVPTPPP*QSCLYC
Trigger: ACAGTACAAACAGGACTGTCAGGGTGGGGGTGTTGG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCCCAAGACCCGCTGCTaGTCCTCCTCAGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPPKTRC*SSSGRL
Trigger: GAGCCTGCCTGAGGAGGAGCAGCAGCGGGTCTTGGG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACATGCCGATCTCCACCATaGGCTCCTTCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTCRSPP*APSAAG
Trigger: ACCTGCCGCTGAAGGAGCGCATGGTGGAGATCGGCA...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GTCCTTGGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACTTGTACTGCTTTTGCTaGTCCTCGGCCAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VLGQPALVSGKDTGDSLHLYCFC*SSASFL
Trigger: CAAAAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAA...GTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACAGGAGCTGGAGCTGCTaGCCTCGGACTCATTATCTT +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDRSWSC*PRTHYL
Trigger: AAGATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCT...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTTCACACCATCTTGCCTaGCTTTCCGCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVSHHLA*LSAFLL
Trigger: CAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGA...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAAGAGTTAGAGACAGCTaGAGATGCAGCTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRRVRDS*RCSFCR
Trigger: TCTGCAAAAGCTGCATCTGCAGCTGTCTCTAACTCT...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACTTTACAGATAAGGGTGATAGTGGCTaGGGACGGTGGCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: QPALVSGKDTGDSLHFTDKGDSG*GRWLKP
Trigger: AGGCTTGAGCCACCGTCCGCAGCCACTATCACCCTT...ATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATCCATGCGCTCTGTGCTaGGCACGTCCTTCATGTTGG +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYPCALC*ARPSCW
Trigger: CCAACATGAAGGACGTGCCCAGCACAGAGCGCATGG...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGCTCTCATATCGCTTTTaGTCTTCGGCTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLLSYRF*SSAAFL
Trigger: TAAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAG...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTTATGCTGCACGGTCCTaGGGAGACAGGCTCTTAACC +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVYAARS*GDRLLT
Trigger: GGTTAAGAGCCTGTCTCCCCAGGACCGTGCAGCATA...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACAATACGGGAGATGGCTaGGAAGAGTTAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNNTGDG*EELETA
Trigger: AGCTGTCTCTAACTCTTCCCAGCCATCTCCCGTATT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACGTCAAACTTGTCCTTaGGCTGGCGTTCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTRQTCP*AGVRPW
Trigger: CCAAGGCCGAACGCCAGCTCAAGGACAAGTTTGACG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACATCCCTCTCCCAGAAATaGCAACAGAGACGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTSLSQK*QQRRQP
Trigger: CGGCTGCCGTCTCTGTTGTCATTTCTGGGAGAGGGA...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGCTTGGCCTCTCAGATaGACAGGGGAGACCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYAWPLR*TGETFS
Trigger: GGAAAAGGTCTCCCCTGTTCATCTGAGAGGCCAAGC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGAGTTGTGGTGGTTGTTaGATCCTACAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: WTMETSSSDACDSGRGSLSCGGC*ILQNTP
Trigger: AGGAGTGTTTTGTAGGATTCAACAACCACCACAACT...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGGTGGGCGGATCACATaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKGGRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCATGTGATCCGCCCACC...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp TCGGACTCCGACTTGGACTGCAGAGTAGTCCGGCTGGATTTGGGGTTTGGGCCTCTTCTACTTACTGTGTaGCCTTGGGCAAGTTACTTA +
Preference number: 4 (lower is better)
Translates to: SDSDLDCRVVRLDLGFGPLLLTV*PWASYL
Trigger: TAAGTAACTTGCCCAAGGTCACACAGTAAGTAGAAG...AGGCCCAAACCCCAAATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAGCCTTTCCGCCTTCCTaGTGGACAATGGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTAFPPS*WTMETS
Trigger: GCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGC...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACGGTTTTGGGCTTCTCTaGGATGTCCGATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDGFGLL*DVRFLG
Trigger: GCCAAGAAATCGGACATCCCAGAGAAGCCCAAAACC...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTTTCTTGGGTTCTCCCTaGAATTTCATCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLFLGSP*NFIFLE
Trigger: TTCCAAGAAGATGAAATTCCAGGGAGAACCCAAGAA...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCTTCTTGGGTTCTCCCTaGAATTTCATCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGFLGSP*NFIFLE
Trigger: TTCCAAGAAGATGAAATTCCAGGGAGAACCCAAGAA...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTTCTTGGGTTCTCCCTaGAATTTCATCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPFLGSP*NFIFLE
Trigger: TTCCAAGAAGATGAAATTCCAGGGAGAACCCAAGAA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGCTGGATTTGGGGTTTaGGCCTCGCAGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYAGFGV*ASQLGH
Trigger: ATGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAGATAGTTGCTGTCCCTaGAGGAGGACCCCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTDSCCP*RRTPKG
Trigger: GCCCTTGGGGGTCCTCCTCCAGGGACAGCAACTATC...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGCAAAACAGAGGATGTaGAGAACGGGGCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYAKQRM*RTGQPQ
Trigger: CTGAGGCTGCCCCGTTCTCCACATCCTCTGTTTTGC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTTTCCGCCTTCCTGCTaGACAATGGAGACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYFPPSC*TMETSS
Trigger: GCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTAGAGATAAGGTGGCTTaGCTTATTAAGAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLRDKVA*LIKSQG
Trigger: TCCTTGACTCTTAATAAGCCAAGCCACCTTATCTCT...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCACTACAGAGATAAGGTaGCTTGGCTTATTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPTTEIR*LGLLRV
Trigger: GACTCTTAATAAGCCAAGCCACCTTATCTCTGTAGT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACATCCAAATAGGAAACTaGGGTTCTTTGCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNIQIGN*GSLQGS
Trigger: AGAGCCCTGCAAAGAACCCCAGTTTCCTATTTGGAT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACGGATATAGTCTCTCATaGTCTCCTCGTACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDGYSLS*SPRTPS
Trigger: GGAAGGAGTACGAGGAGATCATGAGAGACTATATCC...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302904.8
ENST00000436088.6
CDS-3UTR TCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTCCCAGCACATTTCTTaGAGCCCAGGTTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYSQHIS*SPGSEP
Trigger: AGGCTCAGAACCTGGGCTTCAAGAAATGTGCTGGGA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGTTGTACTGCTTTTGCTaGTCCTCGGCCAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQLYCFC*SSASFL
Trigger: CAAAAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAA...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATAGGAGCTGGAGCTGCTaGCCTCGGACTCATTATCTT +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYRSWSC*PRTHYL
Trigger: AAGATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCT...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCCACAGCTGCACCCATaGTATGTACAGGAACACACA +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVPQLHP*YVQEHT
Trigger: TGTGTGTTCCTGTACATAGCATGGGTGCAGCTGTGG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACATCACACCATCTTGCCTaGCTTTCCGCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTSHHLA*LSAFLL
Trigger: CAGCAGGAAGGCGGAAAGGCAGGCAAGATGGTGTGA...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGAAACTGGGGTTCTTTaGAGGGCTCTTGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQETGVL*RALGKK
Trigger: TTTCTTCCCAAGAGCCCTGCAAAGAACCCCAGTTTC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCAGCCGGTCGCTTGGTaGCTCCTCCATTCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFQPVAW*LLHSPA
Trigger: GGCCGGAGAATGGAGGAGCCACCAAGCGACCGGCTG...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTAGAATTTGTAGCAGCTaGAGGTGCCCGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVRICSS*RCPHLT
Trigger: AGTGAGATGCGGGCACCTCCAGCTGCTACAAATTCT...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTCACAACAAACTGATGTaGGCTCTAGGACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVHNKLM*ALGQTP
Trigger: AGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTG...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAAGAGGGAGCCTGGTCTaGGAAGCATCCGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTRGSLV*EASENG
Trigger: GCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCT...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACTTCCTGCTGGACAATaGAGACCAGCAGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTLPAGQ*RPAARM
Trigger: CATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGAATACGGGAGATGGCTaGGAAGAGTTAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQNTGDG*EELETA
Trigger: AGCTGTCTCTAACTCTTCCCAGCCATCTCCCGTATT...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAACTACAGAGATAAGGTaGCTTGGCTTATTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGTTEIR*LGLLRV
Trigger: GACTCTTAATAAGCCAAGCCACCTTATCTCTGTAGT...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGATCTTTGCAGGGCTCTTaGGAAGAAATAGAACCTATA +
Preference number: 4 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRSLQGS*EEIEPI
Trigger: TATAGGTTCTATTTCTTCCCAAGAGCCCTGCAAAGA...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ACAGGTGATTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGTCCCGTGGTCCCAGATaGGGGAGGAAAAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TGDSLHFTDLTTQPKHRGSRGPR*GRKRQS
Trigger: AGACTGCCTTTTCCTCCCCCATCTGGGACCACGGGA...CCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGAAATGCACTCAAGAGTaGCCTCTTACAGCACCAACA +
Preference number: 4 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQKCTQE*PLTAPT
Trigger: TGTTGGTGCTGTAAGAGGTCACTCTTGAGTGCATTT...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTTTGTACTGCTTTTGCTaGTCCTCGGCCAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVLYCFC*SSASFL
Trigger: CAAAAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAA...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAACCCAGAGGTCCAGGTaGACCTTGTACTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTTQRSR*TLYCFC
Trigger: GCAAAAGCAGTACAAGGTGCACCTGGACCTCTGGGT...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGCCAACCCAGAGGTCCAGGTaGACCTTGTACTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HFTDLTTQPKHRGEAQRPTQRSR*TLYCFC
Trigger: GCAAAAGCAGTACAAGGTGCACCTGGACCTCTGGGT...TGGCCTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAGACTCCGACTTGGACTaGAGAGTAGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTDSDLD*RVVRLD
Trigger: ATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTC...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGACTCCGACTTGGACTaGAGAGTAGTCCGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKDSDLD*RVVRLD
Trigger: ATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTC...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAAGGAGGAGCTGGAGCTaGTGCCCTCGGACTCATTAT +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTRRSWS*CPRTHY
Trigger: ATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCTCCT...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAGCCAGGCTGGTCCGGTaGTGGCTTAGTCTGATAGTT +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTARLVR*WLSLIV
Trigger: AACTATCAGACTAAGCCAGCACCGGACCAGCCTGGC...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAAGCTTCACACCATCTTaGCTGCCTTTCCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTSFTPS*LPFRLP
Trigger: AGGAAGGCGGAAAGGCAGGCAAGATGGTGTGAAGCT...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTGCAGATGCAGCTTTTaGAGACTTCTTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYCRCSF*RLLAQL
Trigger: CAGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTGCCCTTCACCGTTCTTaGTCCACCTCCGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFALHRS*STSAAE
Trigger: CTCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGC...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGGTTTTGGGCTTCTCTaGGATGTCCGATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYGFGLL*DVRFLG
Trigger: GCCAAGAAATCGGACATCCCAGAGAAGCCCAAAACC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATCTCGGGCCTTGTACTTaGCCTTCTTCTTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYLGPCT*PSSSQT
Trigger: TGTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAG...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTAGAGGGAGCCTGGTCTaGGAAGCATCCGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPRGSLV*EASENG
Trigger: GCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCT...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACATTTCCGCCTTCCTGCTaGACAATGGAGACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTFPPSC*TMETSS
Trigger: GCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAA...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAGGAAATAGGGGGTGGTaGGAGGATTCAAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTGNRGW*EDSRKA
Trigger: AGCCTTCCTTGAATCCTCCCACCACCCCCTATTTCC...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCTACAAATTCAAGTTGTaGTGGTTGTTGAATCCTACA +
Preference number: 4 (lower is better)
Translates to: PPSCWTMETSSSDACDSGYKFKL*WLLNPT
Trigger: TGTAGGATTCAACAACCACCACAACTTGAATTTGTA...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTACAAATTCAAGTTGTaGTGGTTGTTGAATCCTACA +
Preference number: 4 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMYKFKL*WLLNPT
Trigger: TGTAGGATTCAACAACCACCACAACTTGAATTTGTA...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTACAAATTCAAGTTGTaGTGGTTGTTGAATCCTACA +
Preference number: 4 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPYKFKL*WLLNPT
Trigger: TGTAGGATTCAACAACCACCACAACTTGAATTTGTA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTTCACCCGGTCATTCTTaGAGCGGGCCAGGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFSPGHS*SGPGSR
Trigger: GCGACTACCTGGCCCGCTTCAAGAATGACCGGGTGA...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp CAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACTTTACAGATTGGGAAGGACACAGGTaGTTCTCTCCACTTTACAGA +
Preference number: 4 (lower is better)
Translates to: QPALVSGKDTGDSLHFTDWEGHR*FSPLYR
Trigger: TCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCA...ATCTGTAAAGTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCTCCTGCTTCTCTCCTaGGTCTTTCCAACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPLLLLS*VFPTLP
Trigger: GGGGAGAGTTGGAAAGACGCAGGAGAGAAGCAGGAG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR GCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAAGGAGCTGGAGCTGCTaGCCTCGGACTCATTATCTT +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTRSWSC*PRTHYL
Trigger: AAGATAATGAGTCCGAGGGCAGCAGCTCCAGCTCCT...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGAAACTGGGGTTCTTTaGAGGGCTCTTGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYETGVL*RALGKK
Trigger: TTTCTTCCCAAGAGCCCTGCAAAGAACCCCAGTTTC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAGGTTTTGGGCTTCTCTaGGATGTCCGATTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTGFGLL*DVRFLG
Trigger: GCCAAGAAATCGGACATCCCAGAGAAGCCCAAAACC...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTGCTGGATTTGGGGTTTaGGCCTCGCAGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPAGFGV*ASQLGH
Trigger: ATGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGC...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
3UTR CAA 72 bp ACCCCTTTACACACACACACACACACTCACACTCTTTaGCACACATCCACAGCTGCACCCATGCTATGTACA +
Preference number: 4 (lower is better)
Translates to: TPLHTHTHTHTL*HTSTAAPMLCT
Trigger: TGTACATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCTTCATGTTGGCCATaGGCTCTGCGCAGTACAGCG +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFPSCWP*ALRSTA
Trigger: CGCTGTACTGCGCAGAGCTCATGGCCAACATGAAGG...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTAGTTGTGGTGGTTGTTaGATCCTACAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVSCGGC*ILQNTP
Trigger: AGGAGTGTTTTGTAGGATTCAACAACCACCACAACT...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp AGGCTCAAACTCCTGAAACAGCAAATCCCCACAGTCTTCCTGGGTCCTTGGCCAGAGGAAAAGGCAGTCTaGTTTGGATTCTTCTACTTA +
Preference number: 4 (lower is better)
Translates to: RLKLLKQQIPTVFLGPWPEEKAV*FGFFYL
Trigger: TAAGTAGAAGAATCCAAATCAGACTGCCTTTTCCTC...TGGCCAAGGACCCAGGAAGACTGTGGGGATTTGCTGTTTCAGGAGTTTGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR TCA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGACAGGCTCAAACTCCTaGAACAGCAAATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKTGSNS*NSKSPQ
Trigger: CTGTGGGGATTTGCTGTTTCAGGAGTTTGAGCCTGT...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACATTGTACTGCTTTTGCTaGTCCTCGGCCAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTLYCFC*SSASFL
Trigger: CAAAAAGCTGGCCGAGGAGCAGCAAAAGCAGTACAA...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACATTGCTCATCTCAGGGTaGAGTTTCGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTLLISG*SFAYLA
Trigger: GGCCAAGTATGCGAAACTCCACCCTGAGATGAGCAA...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACATCTGGTAACCGTTCATaGGAGGCTTCTTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTSGNRS*EASWVL
Trigger: GAGAACCCAAGAAGCCTCCCATGAACGGTTACCAGA...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR GCA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAAGAGTTAGAGACAGCTaGAGATGCAGCTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTRVRDS*RCSFCR
Trigger: TCTGCAAAAGCTGCATCTGCAGCTGTCTCTAACTCT...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTTTGCTCATCTCAGGGTaGAGTTTCGCATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPLLISG*SFAYLA
Trigger: GGCCAAGTATGCGAAACTCCACCCTGAGATGAGCAA...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTGCTGGATTTGGGGTTTaGGCCTCGCAGCTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFAGFGV*ASQLGH
Trigger: ATGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGC...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAAAAGGAAATAGGGGGTaGTGGGAGGATTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTKGNRG*WEDSRK
Trigger: CTTCCTTGAATCCTCCCACCACCCCCTATTTCCTTT...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTACTACAGAGATAAGGTaGCTTGGCTTATTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVTTEIR*LGLLRV
Trigger: GACTCTTAATAAGCCAAGCCACCTTATCTCTGTAGT...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAGGAGCTGTCATTGGATaGAAGGTTGTTCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTGAVIG*KVVLHA
Trigger: TGCATGAAGAACAACCTTCCATCCAATGACAGCTCC...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTAATACGGGAGATGGCTaGGAAGAGTTAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPNTGDG*EELETA
Trigger: AGCTGTCTCTAACTCTTCCCAGCCATCTCCCGTATT...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTCTTTGCAGGGCTCTTaGGAAGAAATAGAACCTATA +
Preference number: 4 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYSLQGS*EEIEPI
Trigger: TATAGGTTCTATTTCTTCCCAAGAGCCCTGCAAAGA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGTCCACTTTACAGATCTaGCTACTCAACCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKSTLQI*LLNQST
Trigger: TGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGA...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CCA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCTCTCATATCGCTTTTaGTCTTCGGCTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPLSYRF*SSAAFL
Trigger: TAAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTAGAATTTGTAGCAGCTaGAGGTGCCCGCATCTCACT +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFRICSS*RCPHLT
Trigger: AGTGAGATGCGGGCACCTCCAGCTGCTACAAATTCT...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTAAAGGAAATAGGGGGTaGTGGGAGGATTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFKGNRG*WEDSRK
Trigger: CTTCCTTGAATCCTCCCACCACCCCCTATTTCCTTT...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR TCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTTTCCCAGTCCATGTGTaGTTCGGTGGTTTTGAACTT +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFFPVHV*FGGFEL
Trigger: AAGTTCAAAACCACCGAATCACACATGGACTGGGAA...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCTCTCATATCGCTTTTaGTCTTCGGCTGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFLSYRF*SSAAFL
Trigger: TAAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAG...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CCA 90 bp ACAGGTGATTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGAAAGGCAGTCTGATTTaGATTCTTCTACTTACTGTG +
Preference number: 4 (lower is better)
Translates to: TGDSLHFTDLTTQPKHRGKGSLI*ILLLTV
Trigger: CACAGTAAGTAGAAGAATCCAAATCAGACTGCCTTT...CCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CCA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTAGAGATAAGGTGGCTTaGCTTATTAAGAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFRDKVA*LIKSQG
Trigger: TCCTTGACTCTTAATAAGCCAAGCCACCTTATCTCT...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS CCA 90 bp CCACCTCACCCGAGCGTGTGGATGGGAGCGCAGGCCGGGGGCACCTaGGAGCACGGCGGGCCGAACAGTCGAGCCGCAGCTCCGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PPHPSVWMGAQAGGT*EHGGPNSRAAAPLQ
Trigger: CTGCAGCGGAGCTGCGGCTCGACTGTTCGGCCCGCCGTGCTCCCAGGTGCCCCCGGCCTGCGCTCCCATCCACACGCTCGGGTGAGGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343638.9
ENST00000527034.5
CDS CCA 90 bp CGGCGGCTGCTGCTGCTGTGGCGGCGGCGGCGGCGGCGGCGGCTGTaGCTGCTGCCTGCTGCTCCTCGCGGCGAAAAGCACAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: RRLLLLWRRRRRRRL*LLPAAPRGEKHKAQ
Trigger: CTGTGCTTTGTGCTTTTCGCCGCGAGGAGCAGCAGGCAGCAGCCACAGCCGCCGCCGCCGCCGCCGCCGCCACAGCAGCAGCAGCCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393606.7
CDS CCA 90 bp CTGCAGCCGACGCCGGGGCAGCGAGTCGCCAGACAAAGCCCGAGATaGCGAAGCGGAGCGACGGCTAATGGCGAGCCCCACGCGCCGCGC +
Preference number: 5 (lower is better)
Translates to: LQPTPGQRVARQSPR*RSGATANGEPHAPR
Trigger: GCGCGGCGCGTGGGGCTCGCCATTAGCCGTCGCTCCGCTTCGCCATCTCGGGCTTTGTCTGGCGACTCGCTGCCCCGGCGTCGGCTGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS GCA 90 bp GCACCTGGGAGCACGGCGGGCCGAACAGTCGAGCCGCAGCTCCGCTaGAGCCGACGCCGGGGCAGCGAGTCGCCAGACAAAGCCCGAGAT +
Preference number: 5 (lower is better)
Translates to: APGSTAGRTVEPQLR*SRRRGSESPDKARD
Trigger: ATCTCGGGCTTTGTCTGGCGACTCGCTGCCCCGGCGTCGGCTGCAGCGGAGCTGCGGCTCGACTGTTCGGCCCGCCGTGCTCCCAGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS TCA 90 bp CTCCCGCAGAGTGCGGTGGCCACGGAGTCGGAGGGCAGAGGCTCGTaGAGAGCCGGACGGGGAGGAGCGCAGCGGAAGCCTAACCTCGTA +
Preference number: 5 (lower is better)
Translates to: LPQSAVATESEGRGS*RAGRGGAQRKPNLV
Trigger: TACGAGGTTAGGCTTCCGCTGCGCTCCTCCCCGTCCGGCTCTTCACGAGCCTCTGCCCTCCGACTCCGTGGCCACCGCACTCTGCGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529042.1
CDS CCA 90 bp TCCCTCAACAGAGGGATGGGGAGTGACACCTCCCGCAGAGTGCGGTaGCCACGGAGTCGGAGGGCAGAGGCTCGTGAAGAGCCGGACGGG +
Preference number: 5 (lower is better)
Translates to: SLNRGMGSDTSRRVR*PRSRRAEAREEPDG
Trigger: CCCGTCCGGCTCTTCACGAGCCTCTGCCCTCCGACTCCGTGGCCACCGCACTCTGCGGGAGGTGTCACTCCCCATCCCTCTGTTGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529042.1
CDS-3UTR CAA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCTGTTCGGAGGTGGCTaGGTGGGTCGCCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPLFGGG*VGRPSN
Trigger: GTTTGACGGGCGACCCACCAAGCCACCTCCGAACAG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PPSCWTMETSSSDACDSGADTGR*GFSEPP
Trigger: GGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPADTGR*GFSEPP
Trigger: GGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPADTGR*GFSEPP
Trigger: GGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCCTGGGGTGGCCAGGCTaGGCCTCTCAGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPLGWPG*ASQMNR
Trigger: CCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAG...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS GCA 90 bp CAGCCGGTCGCTTGGTGGCTCCTCCATTCTCCGGCCAAGCCCAGCTaGCTAGAGCGAGCTCCACTCCTCCATCTGTTCGCCGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: QPVAWWLLHSPAKPS*LERAPLLHLFAGVL
Trigger: GAGGACCCCGGCGAACAGATGGAGGAGTGGAGCTCGCTCTAGGCAGCTGGGCTTGGCCGGAGAATGGAGGAGCCACCAAGCGACCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CAA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCATTCTCGGAGCCGCCCTaGCCCCCTTCCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPFSEPP*PPSWAG
Trigger: GCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGAA...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: WTMETSSSDACDSGRGSLADTGR*GFSEPP
Trigger: GGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGC...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS GCA 90 bp AGCAGGCGGGTCAGCTCGCTCTCGGAGAGCTCAGGCCGCTCCTCCTaGAGCTGCCGCCGTTTCTCCTCCGAGAAGATGAACATGGCCGAC +
Preference number: 5 (lower is better)
Translates to: SRRVSSLSESSGRSS*SCRRFSSEKMNMAD
Trigger: GTCGGCCATGTTCATCTTCTCGGAGGAGAAACGGCGGCAGCTGCAGGAGGAGCGGCCTGAGCTCTCCGAGAGCGAGCTGACCCGCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000393606.7
ENST00000436088.6
ENST00000526094.5
ENST00000527034.5
ENST00000529373.1
ENST00000529383.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTTTCTCGGAGCCGCCCTaGCCCCCTTCCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: QREPGLGSIREWLQHTPPFSEPP*PPSWAG
Trigger: GCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGAA...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTTCTCGGAGCCGCCCTaGCCCCCTTCCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPFSEPP*PPSWAG
Trigger: GCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGAA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCGCAGTGCCTGTTTTCTaGAAGGCACCGACCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPAVPVF*KAPTLL
Trigger: GAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTGC...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GGCAGCCTCAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCGCTTTTGCAGACTTCTaGCCCAGCTGTGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: GSLSLLPPGSTSPGPHRPAFADF*PSCGVG
Trigger: CCCAACCCCACAGCTGGGCAAGAAGTCTGCAAAAGC...GGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTGAGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS GCA 90 bp CTGCTTCCCGCTCCCATTGCTCCATCCCCGCTGCCTCCTGCCTCCTaGTTCTCTCCTGCGTCTTTCCAACTCTCCCCTGTCGCCACTGGT +
Preference number: 5 (lower is better)
Translates to: LLPAPIAPSPLPPAS*FSPASFQLSPVATG
Trigger: ACCAGTGGCGACAGGGGAGAGTTGGAAAGACGCAGGAGAGAAGCAGGAGGCAGGAGGCAGCGGGGATGGAGCAATGGGAGCGGGAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCCTGGGACCAACGGTCTaGGCCTTTGGGGGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: PPSCWTMETSSSDACDSGLGPTV*AFGGGH
Trigger: ATGGCCGCCCCCAAAGGCCAAGACCGTTGGTCCCAG...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACTTCTCGGAGCCGCCCTaGCCCCCTTCCTGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNFSEPP*PPSWAG
Trigger: GCCAGCCCAGGAAGGGGGCAAGGGCGGCTCCGAGAA...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQADTGR*GFSEPP
Trigger: GGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGTAGTCCGGCTGGATTaGGGGTTTGGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPVVRLD*GFGPRS
Trigger: GCTGCGAGGCCCAAACCCCAAATCCAGCCGGACTAC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGCCCTTCACCGTTCTaGCTCCACCTCCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGPSPF*LHLRGR
Trigger: TCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAGCTGGCGTTCGGCCTaGGTGAGGGTGGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSWRSA*VRVDLV
Trigger: CACCAAGTCCACCCTCACCAAGGCCGAACGCCAGCT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTGTTCGGAGGTGGCTaGGTGGGTCGCCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLFGGG*VGRPSN
Trigger: GTTTGACGGGCGACCCACCAAGCCACCTCCGAACAG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGGCTGGATTTGGGGTTaGGGCCTCGCAGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPGWIWG*GLAAWS
Trigger: TGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGCC...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTGTAGTCCGGCTGGATTaGGGGTTTGGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLVVRLD*GFGPRS
Trigger: GCTGCGAGGCCCAAACCCCAAATCCAGCCGGACTAC...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGTAGTCCGGCTGGATTaGGGGTTTGGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPVVRLD*GFGPRS
Trigger: GCTGCGAGGCCCAAACCCCAAATCCAGCCGGACTAC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGTAGTCCGGCTGGATTaGGGGTTTGGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPVVRLD*GFGPRS
Trigger: GCTGCGAGGCCCAAACCCCAAATCCAGCCGGACTAC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGGGCCCTTCACCGTTCTaGCTCCACCTCCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: WTMETSSSDACDSGRGSLGPSPF*LHLRGR
Trigger: TCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCC...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAACTGTCTGCCTTCCTTaGGGAGAGGGACCCACCAGC +
Preference number: 5 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPTVCLP*GEGPTS
Trigger: GCTGGTGGGTCCCTCTCCCAAAGGAAGGCAGACAGT...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAAGCTGGCGTTCGGCCTaGGTGAGGGTGGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGSWRSA*VRVDLV
Trigger: CACCAAGTCCACCCTCACCAAGGCCGAACGCCAGCT...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGAGCTGGCGTTCGGCCTaGGTGAGGGTGGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: WTMETSSSDACDSGRGSLSWRSA*VRVDLV
Trigger: CACCAAGTCCACCCTCACCAAGGCCGAACGCCAGCT...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGACTGTTCGGAGGTGGCTaGGTGGGTCGCCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRLFGGG*VGRPSN
Trigger: GTTTGACGGGCGACCCACCAAGCCACCTCCGAACAG...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTGCCGCCTCTCGGGCCTaGTACTTGGCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QREPGLGSIREWLQHTPPAASRA*YLAFFF
Trigger: GAAGAAGAAGGCCAAGTACAAGGCCCGAGAGGCGGC...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCCGCCTCTCGGGCCTaGTACTTGGCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPAASRA*YLAFFF
Trigger: GAAGAAGAAGGCCAAGTACAAGGCCCGAGAGGCGGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGGCTGGATTTGGGGTTaGGGCCTCGCAGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPGWIWG*GLAAWS
Trigger: TGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGCC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGGCTGGATTTGGGGTTaGGGCCTCGCAGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPGWIWG*GLAAWS
Trigger: TGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGCC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTTCCTCGGACTCCGACTaGGACTGCAGAGTAGTCCGG +
Preference number: 5 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLSSDSD*DCRVVR
Trigger: CCGGACTACTCTGCAGTCCAAGTCGGAGTCCGAGGA...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCCTCGGACTCCGACTaGGACTGCAGAGTAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSSDSD*DCRVVR
Trigger: CCGGACTACTCTGCAGTCCAAGTCGGAGTCCGAGGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp GCCTGCCTTTCCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGACTGTCTGCCTTCCTTaGGGAGAGGGACCCACCAGC +
Preference number: 5 (lower is better)
Translates to: ACLSAFLLDNGDQQLGCMTVCLP*GEGPTS
Trigger: GCTGGTGGGTCCCTCTCCCAAAGGAAGGCAGACAGT...CATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGGAAAGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GTCCTTGGCCAACCTGCCTTGGTGAGTGGGAAGGACACAGGTGATTCTCTCCACTGTAGTCCCAGTGCTTaGGGAGGCCGAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: VLGQPALVSGKDTGDSLHCSPSA*GGRGGR
Trigger: CCGCCCACCTCGGCCTCCCAAAGCACTGGGACTACA...GTGGAGAGAATCACCTGTGTCCTTCCCACTCACCAAGGCAGGTTGGCCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS TCA 90 bp CTGAGCACCTGCTGTCTGGTTTACATCTGTGATGGTGCCTGTGCCTaGCCATGTGTGGGCCGAGGAAGGGGCAATCAGGTGTGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSTCCLVYICDGACA*PCVGRGRGNQVWLP
Trigger: GGGCAGCCACACCTGATTGCCCCTTCCTCGGCCCACACATGGTCAGGCACAGGCACCATCACAGATGTAAACCAGACAGCAGGTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS GCA 90 bp CAGTCCCCGCAGAGAAATCGTCCTCCTACCCCGCCTCCATCGCTCTaGGTTTCTCTTCCAATCAGCCGGTCGCTTGGTGGCTCCTCCATT +
Preference number: 5 (lower is better)
Translates to: QSPQRNRPPTPPPSL*VSLPISRSLGGSSI
Trigger: AATGGAGGAGCCACCAAGCGACCGGCTGATTGGAAGAGAAACGCAGAGCGATGGAGGCGGGGTAGGAGGACGATTTCTCTGCGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS GCA 90 bp GGGCCGAGGAAGGGGCAATCAGGTGTGGCTGCCCAGGACCTATTCTaGTGTGCTGACTCACCCTCATCCCTGATGCCAGGTTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GPRKGQSGVAAQDLF*CADSPSSLMPGFSK
Trigger: CTTGGAGAAACCTGGCATCAGGGATGAGGGTGAGTCAGCACAGCAGAATAGGTCCTGGGCAGCCACACCTGATTGCCCCTTCCTCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS-3UTR CAA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGAGCCGCCTCTCGGGCCTaGTACTTGGCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRAASRA*YLAFFF
Trigger: GAAGAAGAAGGCCAAGTACAAGGCCCGAGAGGCGGC...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCATCTCCTCAGCTCTTTaGGGGGACTCGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPISSAL*GDSGSL
Trigger: CAAGCTGCCCGAGTCCCCCAAAAGAGCTGAGGAGAT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCATCTCCTCAGCTCTTTaGGGGGACTCGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPISSAL*GDSGSL
Trigger: CAAGCTGCCCGAGTCCCCCAAAAGAGCTGAGGAGAT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCACACCTTGTACTGCTTTaGCTGCTCCTCGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPHLVLL*LLLGQL
Trigger: AAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGTG...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGACCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 5 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTCCGCGGCAGAGTTCCCGCTCTTCCCCCATTCCTTGGCTTTCATTCAGACCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 5 (lower is better)
Translates to: PPPRQSSRSSPIPWLSFRPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...TCTGAATGAAAGCCAAGGAATGGGGGAAGAGCGGGAACTCTGCCGCGGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCGCAGTGCCTGTTTTCTaGAAGGCACCGACCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPAVPVF*KAPTLL
Trigger: GAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTGC...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGCAGTGCCTGTTTTCTaGAAGGCACCGACCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PPSCWTMETSSSDACDSGAVPVF*KAPTLL
Trigger: GAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTGC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCAGTGCCTGTTTTCTaGAAGGCACCGACCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPAVPVF*KAPTLL
Trigger: GAGGAGGGTCGGTGCCTTCAAGAAAACAGGCACTGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGCTTTTGCAGACTTCTaGCCCAGCTGTGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: PPSCWTMETSSSDACDSGAFADF*PSCGVG
Trigger: CCCAACCCCACAGCTGGGCAAGAAGTCTGCAAAAGC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCATCCTCCTCGGACTCTaGGACTGCAGAGTAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPILLGL*DCRVVR
Trigger: CCGGACTACTCTGCAGTCCAAGAGTCCGAGGAGGAT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527034.5
CDS-3UTR CAA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCTGGGACCAACGGTCTaGGCCTTTGGGGGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDLGPTV*AFGGGH
Trigger: ATGGCCGCCCCCAAAGGCCAAGACCGTTGGTCCCAG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTTGGTGAGGGTGGACTaGGTGATACCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPLVRVD*VIPSSL
Trigger: CAGTGAGGAGGGTATCACCAAGTCCACCCTCACCAA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTTGGTGAGGGTGGACTaGGTGATACCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPLVRVD*VIPSSL
Trigger: CAGTGAGGAGGGTATCACCAAGTCCACCCTCACCAA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCATCTCGGGCCTTGTACTaGGCCTTCTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPSRALY*AFFFSD
Trigger: GTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAGA...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGCCGATAACGCTCTGTaGCCAGATCTCCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPADNAL*PDLLSS
Trigger: AGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGGC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCACCTTGTACTGCTTTaGCTGCTCCTCGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPHLVLL*LLLGQL
Trigger: AAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGTG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACGGCCCTTCACCGTTCTaGCTCCACCTCCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDGPSPF*LHLRGR
Trigger: TCTGCCGCGGAGGTGGAGCAAGAACGGTGAAGGGCC...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GGTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTGGAAACTGGGGTTCTTaGCAGGGCTCTTGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: GSEPGVARLGLSDEQGRPGNWGS*QGSWEE
Trigger: TTCTTCCCAAGAGCCCTGCAAAGAACCCCAGTTTCC...AGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS TCA 90 bp GAAGGGGCAATCAGGTGTGGCTGCCCAGGACCTATTCTGCTGTGCTaGCTCACCCTCATCCCTGATGCCAGGTTTCTCCAAGGCCTACCT +
Preference number: 5 (lower is better)
Translates to: EGAIRCGCPGPILLC*LTLIPDARFLQGLP
Trigger: AGGTAGGCCTTGGAGAAACCTGGCATCAGGGATGAGGGTGAGTCAGCACAGCAGAATAGGTCCTGGGCAGCCACACCTGATTGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS TCA 90 bp AGGGGGAAAGGTTGGTCTGAGCACCTGCTGTCTGGTTTACATCTGTaGTGGTGCCTGTGCCTGACCATGTGTGGGCCGAGGAAGGGGCAA +
Preference number: 5 (lower is better)
Translates to: RGKGWSEHLLSGLHL*WCLCLTMCGPRKGQ
Trigger: TTGCCCCTTCCTCGGCCCACACATGGTCAGGCACAGGCACCATCACAGATGTAAACCAGACAGCAGGTGCTCAGACCAACCTTTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS CCA 90 bp GCTGTCTGGTTTACATCTGTGATGGTGCCTGTGCCTGACCATGTGTaGGCCGAGGAAGGGGCAATCAGGTGTGGCTGCCCAGGACCTATT +
Preference number: 5 (lower is better)
Translates to: AVWFTSVMVPVPDHV*AEEGAIRCGCPGPI
Trigger: AATAGGTCCTGGGCAGCCACACCTGATTGCCCCTTCCTCGGCCCACACATGGTCAGGCACAGGCACCATCACAGATGTAAACCAGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS-3UTR CAA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATGCCGGCGAGCGCGGGTaGAAAGCCAGCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYAGERG*KASQAL
Trigger: CAGAGCTTGGCTGGCTTTCAACCCGCGCTCGCCGGC...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CAA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGATTGGTGAGGGTGGACTaGGTGATACCCTCCTCACTG +
Preference number: 5 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGLVRVD*VIPSSL
Trigger: CAGTGAGGAGGGTATCACCAAGTCCACCCTCACCAA...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGAGCTGGCGTTCGGCCTaGGTGAGGGTGGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQSWRSA*VRVDLV
Trigger: CACCAAGTCCACCCTCACCAAGGCCGAACGCCAGCT...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACCTGTTCGGAGGTGGCTaGGTGGGTCGCCCGTCAAAC +
Preference number: 5 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDLFGGG*VGRPSN
Trigger: GTTTGACGGGCGACCCACCAAGCCACCTCCGAACAG...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCTCTCGGGCCTTGTACTaGGCCTTCTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: PPSCWTMETSSSDACDSGSRALY*AFFFSD
Trigger: GTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAGA...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCGGGCCTTGTACTaGGCCTTCTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSRALY*AFFFSD
Trigger: GTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCTCGGGCCTTGTACTaGGCCTTCTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSRALY*AFFFSD
Trigger: GTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACATCTCCTCAGCTCTTTaGGGGGACTCGGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNISSAL*GDSGSL
Trigger: CAAGCTGCCCGAGTCCCCCAAAAGAGCTGAGGAGAT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp TCGGACTCCGACTTGGACTGCAGAGTAGTCCGGCTGGATTTGGGGTTTGGGCCTCACCTTGTACTGCTTTaGCTGCTCCTCGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SDSDLDCRVVRLDLGFGPHLVLL*LLLGQL
Trigger: AAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGTG...AGGCCCAAACCCCAAATCCAGCCGGACTACTCTGCAGTCCAAGTCGGAGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCCTGCAGATGCAGCTTTaGCAGACTTCTTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPLQMQL*QTSCPA
Trigger: AGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCAG...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTCTGCAGATGCAGCTTTaGCAGACTTCTTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLLQMQL*QTSCPA
Trigger: AGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCAG...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGGCTGGATTTGGGGTTaGGGCCTCGCAGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQGWIWG*GLAAWS
Trigger: TGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGCC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTGTAGTCCGGCTGGATTaGGGGTTTGGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVVVRLD*GFGPRS
Trigger: GCTGCGAGGCCCAAACCCCAAATCCAGCCGGACTAC...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGTCCTCGGACTCCGACTaGGACTGCAGAGTAGTCCGG +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQSSDSD*DCRVVR
Trigger: CCGGACTACTCTGCAGTCCAAGTCGGAGTCCGAGGA...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp AGGCTCAAACTCCTGAAACAGCAAATCCCCACAGTCTTCCTGGGTCCTTGGCCATCCTCGGACTCCGACTaGGACTGCAGAGTAGTCCGG +
Preference number: 5 (lower is better)
Translates to: RLKLLKQQIPTVFLGPWPSSDSD*DCRVVR
Trigger: CCGGACTACTCTGCAGTCCAAGTCGGAGTCCGAGGA...TGGCCAAGGACCCAGGAAGACTGTGGGGATTTGCTGTTTCAGGAGTTTGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CAA 90 bp TGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGAGCCTGCTGCAGATGCAGCTTTaGCAGACTTCTTGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: WTMETSSSDACDSGRGSLLQMQL*QTSCPA
Trigger: AGCTGGGCAAGAAGTCTGCAAAAGCTGCATCTGCAG...CAGGCTCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACACTGTCTGCCTTCCTTaGGGAGAGGGACCCACCAGC +
Preference number: 5 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDTVCLP*GEGPTS
Trigger: GCTGGTGGGTCCCTCTCCCAAAGGAAGGCAGACAGT...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTTCCACCCATTTGAGCTaGCACATGTCTCCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QREPGLGSIREWLQHTPPSTHLS*HMSPEK
Trigger: CTTTTCTGGAGACATGTGCAAGCTCAAATGGGTGGA...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTTCCACCCATTTGAGCTaGCACATGTCTCCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLSTHLS*HMSPEK
Trigger: CTTTTCTGGAGACATGTGCAAGCTCAAATGGGTGGA...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCCACCCATTTGAGCTaGCACATGTCTCCAGAAAAG +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSTHLS*HMSPEK
Trigger: CTTTTCTGGAGACATGTGCAAGCTCAAATGGGTGGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTGAAATCTCCACCCATTaGAGCTTGCACATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLEISTH*SLHMSP
Trigger: TGGAGACATGTGCAAGCTCAAATGGGTGGAGATTTC...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCGCCTTCCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCGAAATCTCCACCCATTaGAGCTTGCACATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PPSCWTMETSSSDACDSGEISTH*SLHMSP
Trigger: TGGAGACATGTGCAAGCTCAAATGGGTGGAGATTTC...GCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGGAAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCGAAATCTCCACCCATTaGAGCTTGCACATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPEISTH*SLHMSP
Trigger: TGGAGACATGTGCAAGCTCAAATGGGTGGAGATTTC...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTTCTCTCATATCGCTTTaGGTCTTCGGCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: QREPGLGSIREWLQHTPPSLISL*VFGCLL
Trigger: AAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAGA...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCTCTCTCATATCGCTTTaGGTCTTCGGCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPSLISL*VFGCLL
Trigger: AAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAGA...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCTCTCTCATATCGCTTTaGGTCTTCGGCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPSLISL*VFGCLL
Trigger: AAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAGA...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTGGCTGGATTTGGGGTTaGGGCCTCGCAGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVGWIWG*GLAAWS
Trigger: TGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGCC...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGACACACTCACACTCTTTaGCACACATCCACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGHTHTL*HTSTAA
Trigger: TGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTG...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGCTTTTGCAGACTTCTaGCCCAGCTGTGGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQAFADF*PSCGVG
Trigger: CCCAACCCCACAGCTGGGCAAGAAGTCTGCAAAAGC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCCAACTTGGAGCTGTCATaGGATGGAAGGTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HLGLGRRCGGPHQTLWDPNLELS*DGRLFF
Trigger: GAAGAACAACCTTCCATCCAATGACAGCTCCAAGTT...GGGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp CCACCTTGGATTGGGCCGCAGGTGTGGAGGGCCTCATCAAACTCTTTGGGACCCAACTTGGAGCTGTCATaGGATGGAAGGTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPWIGPQVWRASSNSLGPNLELS*DGRLFF
Trigger: GAAGAACAACCTTCCATCCAATGACAGCTCCAAGTT...GGGTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
ENST00000527034.5
ENST00000533177.5
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGCCGATAACGCTCTGTaGCCAGATCTCCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQADNAL*PDLLSS
Trigger: AGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGGC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACGCCGATAACGCTCTGTaGCCAGATCTCCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDADNAL*PDLLSS
Trigger: AGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGGC...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCTGCTGGACAATGGAGACCAGCAGCTCGGATGCATGTGACTCTGGCAGAGGGATCTCTCATATCGCTTTaGGTCTTCGGCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PAGQWRPAARMHVTLAEGSLISL*VFGCLL
Trigger: AAGAAGGCAGCCGAAGACCAAAAGCGATATGAGAGA...TCCCTCTGCCAGAGTCACATGCATCCGAGCTGCTGGTCTCCATTGTCCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGCACCTTGTACTGCTTTaGCTGCTCCTCGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQHLVLL*LLLGQL
Trigger: AAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGTG...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACTGGGGTGGCCAGGCTaGGCCTCTCAGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTLGWPG*ASQMNR
Trigger: CCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAGCCGCCTCTCGGGCCTaGTACTTGGCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTAASRA*YLAFFF
Trigger: GAAGAAGAAGGCCAAGTACAAGGCCCGAGAGGCGGC...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACAGGTGATTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGTAGTCCGGCTGGATTaGGGGTTTGGGCCTCGCAGC +
Preference number: 5 (lower is better)
Translates to: TGDSLHFTDLTTQPKHRGVVRLD*GFGPRS
Trigger: GCTGCGAGGCCCAAACCCCAAATCCAGCCGGACTAC...CCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CAA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACATCCTCGGACTCCGACTaGGACTGCAGAGTAGTCCGG +
Preference number: 5 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTSSDSD*DCRVVR
Trigger: CCGGACTACTCTGCAGTCCAAGTCGGAGTCCGAGGA...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACACCACTCTCCGGTCCATaGTCCATGCCGGAACCGCAA +
Preference number: 5 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTPLSGP*SMPEPQ
Trigger: TTGCGGTTCCGGCATGGACAATGGACCGGAGAGTGG...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CAGAGGGAGCCTGGTCTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAAGTTGTGGTGGTTGTaGAATCCTACAAAACACTCC +
Preference number: 5 (lower is better)
Translates to: QREPGLGSIREWLQHTPPKLWWL*NPTKHS
Trigger: GGAGTGTTTTGTAGGATTCAACAACCACCACAACTT...AGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAGACCAGGCTCCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CAGCCTGCTCCCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCATTCAAGTTGTGGTGGTaGTTGAATCCTACAAAACAC +
Preference number: 5 (lower is better)
Translates to: QPAPTRVNISRPSPTLFPFKLWW*LNPTKH
Trigger: GTGTTTTGTAGGATTCAACAACCACCACAACTTGAA...TGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGGGAGCAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GTTCTGAGCCTGGGGTGGCCAGGCTTGGCCTCTCAGATGAACAGGGGAGACCTTACAAAACTTCCACAGTaGGCTTTAAGCATAGGCAGA +
Preference number: 5 (lower is better)
Translates to: VLSLGWPGLASQMNRGDLTKLPQ*ALSIGR
Trigger: TCTGCCTATGCTTAAAGCCAACTGTGGAAGTTTTGT...AAGGTCTCCCCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAGGCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAAGGCCGGAGGGGGATTaGCAAGGAAACCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTRPEGD*QGNLPA
Trigger: AGCAGGCAGGTTTCCTTGCAAATCCCCCTCCGGCCT...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACACAATCAGCCGGTCGCTaGGTGGCTCCTCCATTCTCC +
Preference number: 5 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTQSAGR*VAPPFS
Trigger: GGAGAATGGAGGAGCCACCAAGCGACCGGCTGATTG...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS-3UTR CAA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACAACTTGGAGCTGTCATaGGATGGAAGGTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNNLELS*DGRLFF
Trigger: GAAGAACAACCTTCCATCCAATGACAGCTCCAAGTT...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp TCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGGCTGGATTTGGGGTTaGGGCCTCGCAGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SPLYRSDYSTKAQRGSTKGWIWG*GLAAWS
Trigger: TGACCAAGCTGCGAGGCCCAAACCCCAAATCCAGCC...CTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CAA 90 bp ACCCCAGCCATCCCATCCCAGTGCCAAAATGCACTCAAGAGTGACCTCTTACAGGAAATCTCCACCCATTaGAGCTTGCACATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: TPAIPSQCQNALKSDLLQEISTH*SLHMSP
Trigger: TGGAGACATGTGCAAGCTCAAATGGGTGGAGATTTC...CTGTAAGAGGTCACTCTTGAGTGCATTTTGGCACTGGGATGGGATGGCTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAGCCGATAACGCTCTGTaGCCAGATCTCCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTADNAL*PDLLSS
Trigger: AGAGCTGAGGAGATCTGGCAACAGAGCGTTATCGGC...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACACACCTTGTACTGCTTTaGCTGCTCCTCGGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTHLVLL*LLLGQL
Trigger: AAGCTGGCCGAGGAGCAGCAAAAGCAGTACAAGGTG...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCTGGGGTGGCCAGGCTaGGCCTCTCAGATGAACAGG +
Preference number: 5 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFLGWPG*ASQMNR
Trigger: CCTGTTCATCTGAGAGGCCAAGCCTGGCCACCCCAG...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CCACCAGGGTCAACATCTCCCGGCCCTCACCGACCCTTTTTCCAGATTCACAACTTCAAGTTGTGGTGGTaGTTGAATCCTACAAAACAC +
Preference number: 5 (lower is better)
Translates to: PPGSTSPGPHRPFFQIHNFKLWW*LNPTKH
Trigger: GTGTTTTGTAGGATTCAACAACCACCACAACTTGAA...GTTGTGAATCTGGAAAAAGGGTCGGTGAGGGCCGGGAGATGTTGACCCTGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTGGGAAGCATCCGAGAATGGCTTCAGCACACTCCCCCTAATGGAATCAGAGACACAAAACTTCCACAGTaGGCTTTAAGCATAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LGSIREWLQHTPPNGIRDTKLPQ*ALSIGR
Trigger: TCTGCCTATGCTTAAAGCCAACTGTGGAAGTTTTGT...GTCTCTGATTCCATTAGGGGGAGTGTGCTGAAGCCATTCTCGGATGCTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTTCTCGGGCCTTGTACTaGGCCTTCTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPSRALY*AFFFSD
Trigger: GTCTGAGAAGAAGAAGGCCAAGTACAAGGCCCGAGA...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp GCTGGAGGGATGTGTAAGTTAGGAGCTCCCAGCACATTTCTTGAAGCCCAGGTTAAGTTGTGGTGGTTGTaGAATCCTACAAAACACTCC +
Preference number: 5 (lower is better)
Translates to: AGGMCKLGAPSTFLEAQVKLWWL*NPTKHS
Trigger: GGAGTGTTTTGTAGGATTCAACAACCACCACAACTT...AACCTGGGCTTCAAGAAATGTGCTGGGAGCTCCTAACTTACACATCCCTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAAACTTGGAGCTGTCATaGGATGGAAGGTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTNLELS*DGRLFF
Trigger: GAAGAACAACCTTCCATCCAATGACAGCTCCAAGTT...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp TTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTCCGCCTCACACTCACACTCTTTaGCACACATCCACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FPSNTSFKLHTILPAFPPHTHTL*HTSTAA
Trigger: TGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTG...AGGCGGAAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp AGACCTTTTCCATCAAATACAAGCTTTAAGCTTCACACCATCTTGCCTGCCTTTGGAAACTGGGGTTCTTaGCAGGGCTCTTGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: RPFPSNTSFKLHTILPAFGNWGS*QGSWEE
Trigger: TTCTTCCCAAGAGCCCTGCAAAGAACCCCAGTTTCC...AAAGGCAGGCAAGATGGTGTGAAGCTTAAAGCTTGTATTTGATGGAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CTAGGACAGACCCCTTTACACACACACACACACACTCACACTCTTTTGCACACAAAGTTGTGGTGGTTGTaGAATCCTACAAAACACTCC +
Preference number: 5 (lower is better)
Translates to: LGQTPLHTHTHTHTLLHTKLWWL*NPTKHS
Trigger: GGAGTGTTTTGTAGGATTCAACAACCACCACAACTT...TGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTGTGTGTAAAGGGGTCTGTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACACACACACACTCACACTCTTTTGCACACATCCACAGCTGCACCCATGCTATTTCAAGTTGTGGTGGTaGTTGAATCCTACAAAACAC +
Preference number: 5 (lower is better)
Translates to: HTHTLTLFCTHPQLHPCYFKLWW*LNPTKH
Trigger: GTGTTTTGTAGGATTCAACAACCACCACAACTTGAA...ATAGCATGGGTGCAGCTGTGGATGTGTGCAAAAGAGTGTGAGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp ACAGGTGATTCTCTCCACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGACTTACTGTGTGACCTaGGGCAAGTTACTTAACCTC +
Preference number: 5 (lower is better)
Translates to: TGDSLHFTDLTTQPKHRGTYCVT*GKLLNL
Trigger: GAGGTTAAGTAACTTGCCCAAGGTCACACAGTAAGT...CCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTGGAGAGAATCACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS-3UTR CAA 90 bp ATTCACAACAAACTGATGTGGGCTCTAGGACAGACCCCTTTACACACACACACAACAAAACTTCCACAGTaGGCTTTAAGCATAGGCAGA +
Preference number: 5 (lower is better)
Translates to: IHNKLMWALGQTPLHTHTTKLPQ*ALSIGR
Trigger: TCTGCCTATGCTTAAAGCCAACTGTGGAAGTTTTGT...TGTGTGTGTGTGTAAAGGGGTCTGTCCTAGAGCCCACATCAGTTTGTTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000436088.6
CDS-3UTR CAA 90 bp CACTTTACAGATCTGACTACTCAACCAAAGCACAGAGGGGAAGCACAAAGGCCAAAAAGGCAGTCTGATTaGGATTCTTCTACTTACTGT +
Preference number: 5 (lower is better)
Translates to: HFTDLTTQPKHRGEAQRPKRQSD*DSSTYC
Trigger: ACAGTAAGTAGAAGAATCCAAATCAGACTGCCTTTT...TGGCCTTTGTGCTTCCCCTCTGTGCTTTGGTTGAGTAGTCAGATCTGTAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529947.1
CDS CCA 72 bp CCGAGCGTGTGGATGGGAGCGCAGGCCGGGGGCACCTaGGAGCACGGCGGGCCGAACAGTCGAGCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: PSVWMGAQAGGT*EHGGPNSRAAA
Trigger: AGCTGCGGCTCGACTGTTCGGCCCGCCGTGCTCCCAGGTGCCCCCGGCCTGCGCTCCCATCCACACGCTCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343638.9
ENST00000527034.5
CDS GCA 72 bp TGTGGCGGCGGCGGCGGCGGCGGCGGCTGTGGCTGCTaGCTGCTGCTCCTCGCGGCGAAAAGCACAAAGCAC +
Preference number: 6 (lower is better)
Translates to: CGGGGGGGGCGC*LLLLAAKSTKH
Trigger: GTGCTTTGTGCTTTTCGCCGCGAGGAGCAGCAGGCAGCAGCCACAGCCGCCGCCGCCGCCGCCGCCGCCACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393606.7
CDS GCA 72 bp TGCTGTGGCGGCGGCGGCGGCGGCGGCGGCTGTGGCTaGTGCCTGCTGCTCCTCGCGGCGAAAAGCACAAAG +
Preference number: 6 (lower is better)
Translates to: CCGGGGGGGGCG*CLLLLAAKSTK
Trigger: CTTTGTGCTTTTCGCCGCGAGGAGCAGCAGGCAGCAGCCACAGCCGCCGCCGCCGCCGCCGCCGCCACAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393606.7
CDS GCA 72 bp AGCACGGCGGGCCGAACAGTCGAGCCGCAGCTCCGCTaGAGCCGACGCCGGGGCAGCGAGTCGCCAGACAAA +
Preference number: 6 (lower is better)
Translates to: STAGRTVEPQLR*SRRRGSESPDK
Trigger: TTTGTCTGGCGACTCGCTGCCCCGGCGTCGGCTGCAGCGGAGCTGCGGCTCGACTGTTCGGCCCGCCGTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343638.9
ENST00000527034.5
CDS CCA 72 bp ACGCCGGGGCAGCGAGTCGCCAGACAAAGCCCGAGATaGCGAAGCGGAGCGACGGCTAATGGCGAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: TPGQRVARQSPR*RSGATANGEPH
Trigger: GTGGGGCTCGCCATTAGCCGTCGCTCCGCTTCGCCATCTCGGGCTTTGTCTGGCGACTCGCTGCCCCGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343638.9
CDS CAA 72 bp CGGGGCCGGCGAGACGGCGTGAGGCCGGAGGGGGATTaGCAAGGAAACCTGCCTGCTTCCCGCTCCCATTGC +
Preference number: 6 (lower is better)
Translates to: RGRRDGVRPEGD*QGNLPASRSHC
Trigger: GCAATGGGAGCGGGAAGCAGGCAGGTTTCCTTGCAAATCCCCCTCCGGCCTCACGCCGTCTCGCCGGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS TCA 72 bp CCCAGAAGGCCCCTCCCTCAACAGAGGGATGGGGAGTaGCACCTCCCGCAGAGTGCGGTGGCCACGGAGTCG +
Preference number: 6 (lower is better)
Translates to: PRRPLPQQRDGE*HLPQSAVATES
Trigger: CGACTCCGTGGCCACCGCACTCTGCGGGAGGTGTCACTCCCCATCCCTCTGTTGAGGGAGGGGCCTTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529042.1
CDS CAA 90 bp CGCCGTTTCTCCTCCGAGAAGATGAACATGGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCCTGTCCAGGTGCAGAGGGTCGGGGT +
Preference number: 6 (lower is better)
Translates to: RRFSSEKMNMADTGR*GFSEPPCPGAEGRG
Trigger: ACCCCGACCCTCTGCACCTGGACAGGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGCCATGTTCATCTTCTCGGAGGAGAAACGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529373.1
CDS GCA 72 bp TCAACAGAGGGATGGGGAGTGACACCTCCCGCAGAGTaGGGTGGCCACGGAGTCGGAGGGCAGAGGCTCGTG +
Preference number: 6 (lower is better)
Translates to: STEGWGVTPPAE*GGHGVGGQRLV
Trigger: CACGAGCCTCTGCCCTCCGACTCCGTGGCCACCGCACTCTGCGGGAGGTGTCACTCCCCATCCCTCTGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529042.1
CDS CCA 72 bp AGAGGGATGGGGAGTGACACCTCCCGCAGAGTGCGGTaGCCACGGAGTCGGAGGGCAGAGGCTCGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: RGMGSDTSRRVR*PRSRRAEAREE
Trigger: CTCTTCACGAGCCTCTGCCCTCCGACTCCGTGGCCACCGCACTCTGCGGGAGGTGTCACTCCCCATCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529042.1
CDS CAA 72 bp TCCTCCGAGAAGATGAACATGGCCGACACGGGCCGCTaGGGCTTCTCGGAGCCGCCCTGTCCAGGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: SSEKMNMADTGR*GFSEPPCPGAE
Trigger: CTCTGCACCTGGACAGGGCGGCTCCGAGAAGCCCAAGCGGCCCGTGTCGGCCATGTTCATCTTCTCGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529373.1
CDS GCA 72 bp GCTTGGTGGCTCCTCCATTCTCCGGCCAAGCCCAGCTaGCTAGAGCGAGCTCCACTCCTCCATCTGTTCGCC +
Preference number: 6 (lower is better)
Translates to: AWWLLHSPAKPS*LERAPLLHLFA
Trigger: GGCGAACAGATGGAGGAGTGGAGCTCGCTCTAGGCAGCTGGGCTTGGCCGGAGAATGGAGGAGCCACCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS GCA 72 bp TCGCTCTCGGAGAGCTCAGGCCGCTCCTCCTGCAGCTaGCGCCGTTTCTCCTCCGAGAAGATGAACATGGCC +
Preference number: 6 (lower is better)
Translates to: SLSESSGRSSCS*RRFSSEKMNMA
Trigger: GGCCATGTTCATCTTCTCGGAGGAGAAACGGCGGCAGCTGCAGGAGGAGCGGCCTGAGCTCTCCGAGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000393606.7
ENST00000436088.6
ENST00000526094.5
ENST00000527034.5
ENST00000529373.1
ENST00000529383.5
ENST00000533177.5
CDS CCA 72 bp ATCGCTCTGCGTTTCTCTTCCAATCAGCCGGTCGCTTaGTGGCTCCTCCATTCTCCGGCCAAGCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: IALRFSSNQPVA*WLLHSPAKPSC
Trigger: GCAGCTGGGCTTGGCCGGAGAATGGAGGAGCCACCAAGCGACCGGCTGATTGGAAGAGAAACGCAGAGCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS GCA 72 bp CAGAGAAATCGTCCTCCTACCCCGCCTCCATCGCTCTaGGTTTCTCTTCCAATCAGCCGGTCGCTTGGTGGC +
Preference number: 6 (lower is better)
Translates to: QRNRPPTPPPSL*VSLPISRSLGG
Trigger: GCCACCAAGCGACCGGCTGATTGGAAGAGAAACGCAGAGCGATGGAGGCGGGGTAGGAGGACGATTTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302904.8
CDS CCA 72 bp CATTCTCATCCCCATCCTCGCTCTCGTCCTCGCTGCTaGACTCAGAGGAGTCGCCGCCATCTTCAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: HSHPHPRSRPRC*TQRSRRHLQRS
Trigger: ACTCCTCTGAAGATGGCGGCGACTCCTCTGAGTCCAGCAGCGAGGACGAGAGCGAGGATGGGGATGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000302904.8
ENST00000343638.9
ENST00000393606.7
ENST00000436088.6
ENST00000526094.5
ENST00000527034.5
ENST00000529383.5
ENST00000533177.5
CDS GCA 72 bp AAGGGGCAATCAGGTGTGGCTGCCCAGGACCTATTCTaGTGTGCTGACTCACCCTCATCCCTGATGCCAGGT +
Preference number: 6 (lower is better)
Translates to: KGQSGVAAQDLF*CADSPSSLMPG
Trigger: ACCTGGCATCAGGGATGAGGGTGAGTCAGCACAGCAGAATAGGTCCTGGGCAGCCACACCTGATTGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS CCA 72 bp TTTACATCTGTGATGGTGCCTGTGCCTGACCATGTGTaGGCCGAGGAAGGGGCAATCAGGTGTGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: FTSVMVPVPDHV*AEEGAIRCGCP
Trigger: TGGGCAGCCACACCTGATTGCCCCTTCCTCGGCCCACACATGGTCAGGCACAGGCACCATCACAGATGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS TCA 72 bp TGCTGTCTGGTTTACATCTGTGATGGTGCCTGTGCCTaGCCATGTGTGGGCCGAGGAAGGGGCAATCAGGTG +
Preference number: 6 (lower is better)
Translates to: CCLVYICDGACA*PCVGRGRGNQV
Trigger: CACCTGATTGCCCCTTCCTCGGCCCACACATGGTCAGGCACAGGCACCATCACAGATGTAAACCAGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS TCA 72 bp ATCAGGTGTGGCTGCCCAGGACCTATTCTGCTGTGCTaGCTCACCCTCATCCCTGATGCCAGGTTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: IRCGCPGPILLC*LTLIPDARFLQ
Trigger: TTGGAGAAACCTGGCATCAGGGATGAGGGTGAGTCAGCACAGCAGAATAGGTCCTGGGCAGCCACACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537550.1
CDS GCA 72 bp GGGTTTTCTGTAGGGGGAAAGGTTGGTCTGAGCACCTaGTGTCTGGTTTACATCTGTGATGGTGCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: GFSVGGKVGLST*CLVYICDGACA
Trigger: GGCACAGGCACCATCACAGATGTAAACCAGACAGCAGGTGCTCAGACCAACCTTTCCCCCTACAGAAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537550.1