RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBTD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165886

Ensembl transcript IDs: ENST00000370664.4

Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCAGAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTaGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAG +
Preference number: 1 (lower is better)
Translates to: RQRPASGFPSPGAHG*FPPFQGSGTVPRGE
Trigger: CTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR TCA 90 bp GCTGCCTGCTCCCTGGGTACCGGGAACTGGTGGCGCGTAGTGCCCTaGAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGAG +
Preference number: 1 (lower is better)
Translates to: AACSLGTGNWWRVVP*KAGSLHGSPTSHTE
Trigger: CTCGGTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR CCA 90 bp CCAGATGACAGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTaGCTCGAACCTGCTTCGGGAGACAGGCAGGGTGAGGGCCCTGTT +
Preference number: 1 (lower is better)
Translates to: PDDRSGLQGPPGWPL*LEPASGDRQGEGPV
Trigger: AACAGGGCCCTCACCCTGCCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCTGTCATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR GCA 90 bp CCTGTTCGCCTTTTCTCTGACAAGGTTGCAAGGCCCGTGTGTGGCTaGCTGCTCCCTGGGTACCGGGAACTGGTGGCGCGTAGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: PVRLFSDKVARPVCG*LLPGYRELVARSAL
Trigger: CAGGGCACTACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAGAGAAAAGGCGAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR GCA 90 bp GAGAGGCAGAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCAGGCCCGTGTGTGGCTaGCTGCTCCCTGGGTACCGG +
Preference number: 2 (lower is better)
Translates to: ERQRPASGFPSPGAHGWFRPVCG*LLPGYR
Trigger: CCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCT...GAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTCTGCCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR GCA 90 bp GAGAGGCAGAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCGTGTGTGGCTGCCTaGTCCCTGGGTACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: ERQRPASGFPSPGAHGWFPCVAA*SLGTGN
Trigger: GTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGG...GAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTCTGCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR CCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTTGGCTGCCTGCTCCCTaGGTACCGGGAACTGGTGGC +
Preference number: 2 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLWLPAP*VPGTGG
Trigger: GCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCA...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR TCA 90 bp CGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGTGGCGCGTAGTGCCCTaGAAGGCAGGGTCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: RVVPSLPREWHCAQGRARWRVVP*KAGSLH
Trigger: GTGAAGGGACCCTGCCTTTCAGGGCACTACGCGCCA...CCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR CCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCTGGTTGGCCCTTGTaGCTCGAACCTGCTTCGGGA +
Preference number: 2 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLPGWPL*LEPASG
Trigger: TCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGG...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR CAA 90 bp GAGACAGGCAGGGTGAGGGCCCTGTTCGCCTTTTCTCTGACAAGGTaGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGTACCGGGAAC +
Preference number: 2 (lower is better)
Translates to: ETGRVRALFAFSLTR*QGPCVAACSLGTGN
Trigger: GTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAGAGAAAAGGCGAACAGGGCCCTCACCCTGCCTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR TCA 90 bp GATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGTGTTCGCCTTTTCTCTaGCAAGGTTGCAAGGCCCGT +
Preference number: 2 (lower is better)
Translates to: DLGSRGLLVGPCGSNLLRCSPFL*QGCKAR
Trigger: ACGGGCCTTGCAACCTTGTCAGAGAAAAGGCGAACA...CCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR CCA 72 bp CCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTaGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCC +
Preference number: 3 (lower is better)
Translates to: PASGFPSPGAHG*FPPFQGSGTVP
Trigger: GGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR-3UTR CAA 90 bp CGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGCCTCCTGGTTGGCCCTaGTGGCTCGAACCTGCTTCG +
Preference number: 3 (lower is better)
Translates to: RVVPSLPREWHCAQGRARPPGWP*WLEPAS
Trigger: CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGG...CCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR TCA 72 bp TCCCTGGGTACCGGGAACTGGTGGCGCGTAGTGCCCTaGAAGGCAGGGTCCCTTCACGGCTCACCCACCAGC +
Preference number: 3 (lower is better)
Translates to: SLGTGNWWRVVP*KAGSLHGSPTS
Trigger: GCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACGCGCCACCAGTTCCCGGTACCCAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR CCA 72 bp AGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTaGCTCGAACCTGCTTCGGGAGACAGGCAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: RSGLQGPPGWPL*LEPASGDRQGE
Trigger: CTCACCCTGCCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR GCA 72 bp TCTCTGACAAGGTTGCAAGGCCCGTGTGTGGCTGCCTaGTCCCTGGGTACCGGGAACTGGTGGCGCGTAGTG +
Preference number: 3 (lower is better)
Translates to: SLTRLQGPCVAA*SLGTGNWWRVV
Trigger: CACTACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR CCA 72 bp CCAGATGACAGATCTGGGCTCCAGGGGCCTCCTGGTTaGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: PDDRSGLQGPPG*PLWLEPASGDR
Trigger: CCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCTGTCATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR GCA 72 bp CTTTTCTCTGACAAGGTTGCAAGGCCCGTGTGTGGCTaGCTGCTCCCTGGGTACCGGGAACTGGTGGCGCGT +
Preference number: 3 (lower is better)
Translates to: LFSDKVARPVCG*LLPGYRELVAR
Trigger: ACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAGAGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp GATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGCGGGCAGGCTGGCGCTaGGCCTCACGTCCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: DLGSRGLLVGPCGSNLLRRAGWR*ASRPCP
Trigger: CGGGCAAGGACGTGAGGCTCAGCGCCAGCCTGCCCG...CCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCGTGCAGCTGCCTCTTaGGCTGCCCCACTGTGTCGG +
Preference number: 4 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLRAAAS*AAPLCR
Trigger: CCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACG...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTTGGCGCGTAGTGCCCTaGAAGGCAGGGTCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLWRVVP*KAGSLH
Trigger: GTGAAGGGACCCTGCCTTTCAGGGCACTACGCGCCA...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CTGACAAGGTTGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGTACCGGGAACCTCAGCCAGTCCCCATaGACCGGAGGCGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: LTRLQGPCVAACSLGTGNLSQSP*TGGGGV
Trigger: CACCCCGCCGCCTCCGGTGCATGGGGACTGGCTGAG...GTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp GAGAGGCAGAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCTCCTGGGCGTGCAGCTaGCTCTTGAGCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: ERQRPASGFPSPGAHGWFSWACS*LLSCPT
Trigger: AGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGA...GAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTCTGCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTATGCCCTCCTGGGCGTaGAGCTGCCTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLMPSWA*SCLLSC
Trigger: GCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCAT...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGCCACGATGGCTCGATaGCCTCCTGGGCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGLTGGSLPSKGVALCPGATMAR*PPGRAA
Trigger: AGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGC...CCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp TGGCTCGAACCTGCTTCGGGAGACAGGCAGGGTGAGGGCCCTGTTCGCCTTTTCGGCGTCCCGGGTCAATaGCTCCGGCCGCCCGGCATC +
Preference number: 4 (lower is better)
Translates to: WLEPASGDRQGEGPVRLFGVPGQ*LRPPGI
Trigger: GATGCCGGGCGGCCGGAGCCATTGACCCGGGACGCC...GAAAAGGCGAACAGGGCCCTCACCCTGCCTGTCTCCCGAAGCAGGTTCGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGGGGGCTCGATGCCCTCCTaGGCGTGCAGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGSLPSKGVALCPGESQGGSMPS*ACSCLL
Trigger: CAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCC...CCCCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGGGCTTCCCAGGGGTCCGTaGGCCCATCAGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGSLPSKGVALCPGESQGLPRGP*AHQSWG
Trigger: ACCCCAGGACTGATGGGCCCACGGACCCCTGGGAAG...CCCCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTTGCCATGAGGCAGGGTaGTGCTGGCTCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLCHEAG*CWLHPG
Trigger: TCCTGGATGGAGCCAGCATCACCCTGCCTCATGGCA...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp CTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGCCGTGTGCGGTCTGTaGGCAGCTTCCCGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGLTGGSLPSKGVALCPGAVCGL*AASRRR
Trigger: TCTTCTCCGGGAAGCTGCTCACAGACCGCACACGGC...CCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGACCACCGCTGCCACGATaGCTCGATGCCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSALKGRVPSRLTHQPHRPPLPR*LDALLG
Trigger: GCCCAGGAGGGCATCGAGCCATCGTGGCAGCGGTGG...TCGGTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGCCTGGGGCTCACGGGTaGTTCCCTCCCTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: DLGSRGLLVGPCGSNLLRPGAHG*FPPFQG
Trigger: CCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGG...CCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGCAAGGCTTCCCAAGCCCTaGGGCTCACGGGTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PGASWLALVARTCFGRQARLPKP*GSRVVP
Trigger: GGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCT...TGCCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGCACCACGCAGTTGCCCATaGTGGCTCCTCAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PGASWLALVARTCFGRQAPRSCP*WLLSQS
Trigger: GGACTGGCTGAGGAGCCAGCATGGGCAACTGCGTGG...TGCCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp GTGGCGCGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCAGTCTCCCCACGCAGTTaGCCATGCTGGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VARSALKGRVPSRLTHQPVSPRS*PCWLLS
Trigger: GCTGAGGAGCCAGCATGGGCAACTGCGTGGGGAGAC...TGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACGCGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp TGTGGCTGCCTGCTCCCTGGGTACCGGGAACTGGTGGCGCGTAGTGCCCTGAAAGCCCTGTGCAGACCCTaGCACGACAGCCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: CGCLLPGYRELVARSALKALCRP*HDSPAV
Trigger: GACAGCTGGGCTGTCGTGGCAGGGTCTGCACAGGGC...TTTCAGGGCACTACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGCTGTCCACAGGGACCTaGTGTGGAGGCCATGACCAG +
Preference number: 4 (lower is better)
Translates to: RVVPSLPREWHCAQGRARLSTGT*CGGHDQ
Trigger: CTGGTCATGGCCTCCACAGCAGGTCCCTGTGGACAG...CCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCAGGGGAGAGAGGGAAGTaGCAGACTCCCCAGCACGGT +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVAGERGK*QTPQHG
Trigger: ACCGTGCTGGGGAGTCTGCCACTTCCCTCTCTCCCC...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGGGGCTCAGCCCCAGCGATaGCTCCGCCAAAACTTTGCG +
Preference number: 4 (lower is better)
Translates to: GGSLPSKGVALCPGESQGAQPQR*LRQNFA
Trigger: CGCAAAGTTTTGGCGGAGCCATCGCTGGGGCTGAGC...CCCCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCGCGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGCAGTTGCCCATGCTaGCTCCTCAGCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ARSALKGRVPSRLTHQPHRSCPC*LLSQSP
Trigger: TGGGGACTGGCTGAGGAGCCAGCATGGGCAACTGCG...GTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGCAGCCTGGGCCAGCTCGTaGTCGTTGGCTTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGASWLALVARTCFGRQAAWASS*SLASAA
Trigger: TGCTGCTGAAGCCAACGACCACGAGCTGGCCCAGGC...TGCCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACCATCCAGGATGGCCTaGGCCAGCTCGTGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVAPSRMA*ASSWSL
Trigger: CAACGACCACGAGCTGGCCCAGGCCATCCTGGATGG...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCATCACGTCCTTGCCCGTaGACAGGCGCACCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVASRPCP*TGAPSA
Trigger: CGCTGAAGGTGCGCCTGTCCACGGGCAAGGACGTGA...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp AGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGTGGCTGCCTGCTCCCTaGGTACCGGGAACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSGLQGPPGWPLWLEPASWLPAP*VPGTGG
Trigger: GCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCA...CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCATGCAAGGCCCGTGTGTaGCTGCCTGCTCCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVACKARV*LPAPWV
Trigger: TACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCA...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp AAGGTTGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGTACCGGGAACTGGTGGCTCCAGGGGCCTCCTaGTTGGCCCTTGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: KVARPVCGCLLPGYRELVAPGAS*LALVAR
Trigger: TCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGC...CACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTAGACCTCCCACTGCCTaGGTTACAGCCAGGACATGG +
Preference number: 4 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLRPPTA*VTARTW
Trigger: CCATGTCCTGGCTGTAACCCAGGCAGTGGGAGGTCT...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp CTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGCATAGGCGGCAGCCTTaGGGGCATCCCAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: LQGPPGWPLWLEPASGDRHRRQP*GHPRSP
Trigger: AGGAGATCTGGGATGCCCTCAAGGCTGCCGCCTATG...CCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGACATCCCAGATCTCCTTaGGGCCCTCGAAGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RSALKGRVPSRLTHQPHRHPRSP*GPRRQA
Trigger: CGCCTGCCTTCGAGGGCCGCAAGGAGATCTGGGATG...TCGGTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CTGACAAGGTTGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGTACCGGGAACAGCTGCCTCTTGAGCTaGCCCACTGTGTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LTRLQGPCVAACSLGTGNSCLLS*PTVSGR
Trigger: CCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCT...GTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp TGGCTCGAACCTGCTTCGGGAGACAGGCAGGGTGAGGGCCCTGTTCGCCTTTTCCCGTGTGTGGCTGCCTaGTCCCTGGGTACCGGGAAC +
Preference number: 4 (lower is better)
Translates to: WLEPASGDRQGEGPVRLFPCVAA*SLGTGN
Trigger: GTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGG...GAAAAGGCGAACAGGGCCCTCACCCTGCCTGTCTCCCGAAGCAGGTTCGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACACCCGCCTCATCTCTaGCAATTGTGCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVAHPPHL*QLCWGQ
Trigger: CTGCCCCCAGCACAATTGGCAGAGATGAGGCGGGTG...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp TGTGGCTGCCTGCTCCCTGGGTACCGGGAACTGGTGGCGCGTAGTGCCCTGAAACAGGACATGGCCCTGTaGAGACCCTGCCACGACAGC +
Preference number: 4 (lower is better)
Translates to: CGCLLPGYRELVARSALKQDMAL*RPCHDS
Trigger: GCTGTCGTGGCAGGGTCTGCACAGGGCCATGTCCTG...TTTCAGGGCACTACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTGTGACAGGCAGTAGATaGGCAGCTGGTAGCGATTGC +
Preference number: 4 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLVTGSR*AAGSDC
Trigger: GCAATCGCTACCAGCTGCCCATCTACTGCCTGTCAC...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp AGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGTCTTCAGGGGCTCATTaGGTCCTGCTCGCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: RSGLQGPPGWPLWLEPASSSGAH*VLLACG
Trigger: CCCGCAAGCGAGCAGGACGCAATGAGCCCCTGAAGA...CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp CTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGAGAACTCATCCCGTTTaGTCCGCAGCTGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LQGPPGWPLWLEPASGDRRTHPV*SAAARQ
Trigger: CTGACGGGCAGCTGCGGAGCAAACGGGATGAGTTCT...CCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp AAGGTTGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGTACCGGGAACTGGTGGAGAAGAACCACCGCTaGCACGATGGCTCGATGCCC +
Preference number: 4 (lower is better)
Translates to: KVARPVCGCLLPGYRELVEKNHR*HDGSMP
Trigger: GGGCATCGAGCCATCGTGGCAGCGGTGGTTCTTCTC...CACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCAGCTGCCCGTCAGTCATaGGGTAGTCGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVAAARQS*GSRSST
Trigger: AGTGGAAGAGCGACTACCCCATGACTGACGGGCAGC...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp AAGGTTGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGTACCGGGAACTGGTGCCAGCTCGTGGTCGTTaGCTTCAGCAGCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: KVARPVCGCLLPGYRELVPARGR*LQQHRR
Trigger: CCGCCTATGCTGCTGAAGCCAACGACCACGAGCTGG...CACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGTGGGGTGGTGGGGGCTaGTTGATGATGACCTGGATG +
Preference number: 4 (lower is better)
Translates to: LQGPPGWPLWLEPASGDRWGGGG*LMMTWM
Trigger: CATCCAGGTCATCATCAACCAGCCCCCACCACCCCA...CCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGATCCCTTCCAAGGGAGTaGCACTGTGCCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSALKGRVPSRLTHQPHRSLPRE*HCAQGR
Trigger: TCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGA...TCGGTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGAGTTACAGCCAGGACATaGCCCTGTGCAGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: RSALKGRVPSRLTHQPHRVTART*PCADPA
Trigger: GGCAGGGTCTGCACAGGGCCATGTCCTGGCTGTAAC...TCGGTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp CGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGTGTTCGCCTTTTCTCTaGCAAGGTTGCAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RVVPSLPREWHCAQGRARCSPFL*QGCKAR
Trigger: ACGGGCCTTGCAACCTTGTCAGAGAAAAGGCGAACA...CCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACCGATGGATCTTGGTCTCCTaGAGCCGTGTGCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSALKGRVPSRLTHQPHRWILVS*SRVRSV
Trigger: CACAGACCGCACACGGCTCCAGGAGACCAAGATCCA...TCGGTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
3UTR CAA 72 bp AGGGTGAGGGCCCTGTTCGCCTTTTCTCTGACAAGGTaGCAAGGCCCGTGTGTGGCTGCCTGCTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RVRALFAFSLTR*QGPCVAACSLG
Trigger: ACCCAGGGAGCAGGCAGCCACACACGGGCCTTGCAACCTTGTCAGAGAAAAGGCGAACAGGGCCCTCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCAAGCTGCTTCAGACCCTaGGCAGAAAACCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ASQALGLTGGSLPSKGVASCFRP*AENQSE
Trigger: CTCACTCTGGTTTTCTGCTCAGGGTCTGAAGCAGCT...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp CTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGAATCTTTCTGGATCTTaGTCTCCTGGAGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: LGLTGGSLPSKGVALCPGNLSGS*SPGAVC
Trigger: GCACACGGCTCCAGGAGACCAAGATCCAGAAAGATT...CCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR GCA 90 bp AGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGCAGCTGGTAGCGATTaGCCAGCTCATCGTAGCATT +
Preference number: 4 (lower is better)
Translates to: RSGLQGPPGWPLWLEPASAAGSD*PAHRSI
Trigger: AATGCTACGATGAGCTGGGCAATCGCTACCAGCTGC...CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp TGTGGCTGCCTGCTCCCTGGGTACCGGGAACTGGTGGCGCGTAGTGCCCTGAAATGGTTGATGATGACCTaGATGACAAAATCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CGCLLPGYRELVARSALKWLMMT*MTKSFW
Trigger: CCAGAAAGATTTTGTCATCCAGGTCATCATCAACCA...TTTCAGGGCACTACGCGCCACCAGTTCCCGGTACCCAGGGAGCAGGCAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR TCA 90 bp GCTTTATTGATAAATATGCAGATATGTCTGTCCACAGGGACCTGCTGTGGAGGCCAGGTTCACCGGCGGTaGCAGGCAGTAGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLINMQICLSTGTCCGGQVHRR*QAVDGQ
Trigger: CTGCCCATCTACTGCCTGTCACCGCCGGTGAACCTG...GCCTCCACAGCAGGTCCCTGTGGACAGACATATCTGCATATTTATCAATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CCA 90 bp GCTTTATTGATAAATATGCAGATATGTCTGTCCACAGGGACCTGCTGTGGAGGCCCTGGTTGGCCCTTGTaGCTCGAACCTGCTTCGGGA +
Preference number: 4 (lower is better)
Translates to: ALLINMQICLSTGTCCGGPGWPL*LEPASG
Trigger: TCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGG...GCCTCCACAGCAGGTCCCTGTGGACAGACATATCTGCATATTTATCAATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 90 bp CTCCTCAGCCAGTCCCCATGCACCGGAGGCGGCGGGGTGGTCGGCTaGTCAGCGGACGGCGGCGTCCCGGGTCAATGGCTCCGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LLSQSPCTGGGGVVG*SADGGVPGQWLRPP
Trigger: GGGCGGCCGGAGCCATTGACCCGGGACGCCGCCGTCCGCTGAGCAGCCGACCACCCCGCCGCCTCCGGTGCATGGGGACTGGCTGAGGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp GAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTTTGCGTCCTGCTCGCTaGCGGGGGTGTCCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: EARLRLPKPWGSRVVPSLLRPAR*RGCPGA
Trigger: AGCCCCGGGACACCCCCGCAAGCGAGCAGGACGCAA...AAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 90 bp AACCACCGCTGCCACGATGGCTCGATGCCCTCCTGGGCGTGCAGCTaGCTCTTGAGCTGCCCCACTGTGTCGGGCAGGCTGGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: NHRCHDGSMPSWACS*LLSCPTVSGRLALS
Trigger: GCTCAGCGCCAGCCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGCAGCGGTGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 90 bp CACGATGGCTCGATGCCCTCCTGGGCGTGCAGCTGCCTCTTGAGCTaGCCCACTGTGTCGGGCAGGCTGGCGCTGAGCCTCACGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HDGSMPSWACSCLLS*PTVSGRLALSLTSL
Trigger: CAAGGACGTGAGGCTCAGCGCCAGCCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 90 bp GAGAAGAACCACCGCTGCCACGATGGCTCGATGCCCTCCTGGGCGTaGAGCTGCCTCTTGAGCTGCCCCACTGTGTCGGGCAGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: EKNHRCHDGSMPSWA*SCLLSCPTVSGRLA
Trigger: CGCCAGCCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGCAGCGGTGGTTCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp GATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGCTGAGCCTCACGTCCTaGCCCGTGGACAGGCGCACC +
Preference number: 5 (lower is better)
Translates to: DLGSRGLLVGPCGSNLLRLSLTS*PVDRRT
Trigger: GGTGCGCCTGTCCACGGGCAAGGACGTGAGGCTCAG...CCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS TCA 90 bp GGGCCAGCTCGTGGTCGTTGGCTTCAGCAGCATAGGCGGCAGCCTTaGGGGCATCCCAGATCTCCTTGCGGCCCTCGAAGGCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GPARGRWLQQHRRQP*GHPRSPCGPRRQAL
Trigger: CAGCGCCTGCCTTCGAGGGCCGCAAGGAGATCTGGGATGCCCTCAAGGCTGCCGCCTATGCTGCTGAAGCCAACGACCACGAGCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS CCA 90 bp TTCCCGGAGAAGAACCACCGCTGCCACGATGGCTCGATGCCCTCCTaGGCGTGCAGCTGCCTCTTGAGCTGCCCCACTGTGTCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: FPEKNHRCHDGSMPS*ACSCLLSCPTVSGR
Trigger: CCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGCAGCGGTGGTTCTTCTCCGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS CCA 90 bp GCGGTCTGTGAGCAGCTTCCCGGAGAAGAACCACCGCTGCCACGATaGCTCGATGCCCTCCTGGGCGTGCAGCTGCCTCTTGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AVCEQLPGEEPPLPR*LDALLGVQLPLELP
Trigger: GGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGCAGCGGTGGTTCTTCTCCGGGAAGCTGCTCACAGACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCAGGCTCCGCCAAAACTTaGCGGGCCAGGGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: ASQALGLTGGSLPSKGVAGSAKT*RARGER
Trigger: CCTCTCTCCCCTGGCCCGCAAAGTTTTGGCGGAGCC...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp GCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCAGCATCCCAGATCTCCTaGCGGCCCTCGAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ASQALGLTGGSLPSKGVAASQIS*RPSKAG
Trigger: GCCTGCCTTCGAGGGCCGCAAGGAGATCTGGGATGC...TGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAGGGCTTGGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp GCGCGTAGTGCCCTGAAAGGCAGGGTCCCTTCACGGCTCACCCACCAGCCACACGCGTGCAGCTGCCTCTaGAGCTGCCCCACTGTGTCG +
Preference number: 5 (lower is better)
Translates to: ARSALKGRVPSRLTHQPHACSCL*SCPTVS
Trigger: CGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGC...GTGTGGCTGGTGGGTGAGCCGTGAAGGGACCCTGCCTTTCAGGGCACTACGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp CGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGAGAGCCAGGTTCTTCAGGGGCTCATaGCGTCCTGCTCGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: RVVPSLPREWHCAQGRARFFRGS*RPARLR
Trigger: CCGCAAGCGAGCAGGACGCAATGAGCCCCTGAAGAA...CCTGGCTCTCCCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp AGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGTGTCTCCCCACGCAGTaGCCCATGCTGGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: RSGLQGPPGWPLWLEPASCLPTQ*PMLAPQ
Trigger: CTGAGGAGCCAGCATGGGCAACTGCGTGGGGAGACA...CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp CTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGGGAGACAGGCAGAACTCATCCCGTTaGCTCCGCAGCTGCCCGTCA +
Preference number: 5 (lower is better)
Translates to: LQGPPGWPLWLEPASGDRQNSSR*LRSCPS
Trigger: TGACGGGCAGCTGCGGAGCAAACGGGATGAGTTCTG...CCTGTCTCCCGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp CTGGGGCTCACGGGTGGTTCCCTCCCTTCCAAGGGAGTGGCACTGTGCCCAGGGGGTGGTGGGGGCTGGTaGATGATGACCTGGATGACA +
Preference number: 5 (lower is better)
Translates to: LGLTGGSLPSKGVALCPGGGGGW*MMTWMT
Trigger: TGTCATCCAGGTCATCATCAACCAGCCCCCACCACC...CCCTGGGCACAGTGCCACTCCCTTGGAAGGGAGGGAACCACCCGTGAGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS TCA 90 bp CAGGCTCTCCTCCTCCGTGTGCTCCAGCAGCAGGTTCACCGGCGGTaGCAGGCAGTAGATGGGCAGCTGGTAGCGATTGCCCAGCTCATC +
Preference number: 5 (lower is better)
Translates to: QALLLRVLQQQVHRR*QAVDGQLVAIAQLI
Trigger: GATGAGCTGGGCAATCGCTACCAGCTGCCCATCTACTGCCTGTCACCGCCGGTGAACCTGCTGCTGGAGCACACGGAGGAGGAGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 90 bp TGCGGCCCTCGAAGGCAGGCGCTGTGTCCCAGAACTCATCCCGTTTaGTCCGCAGCTGCCCGTCAGTCATGGGGTAGTCGCTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: CGPRRQALCPRTHPV*SAAARQSWGSRSST
Trigger: AGTGGAAGAGCGACTACCCCATGACTGACGGGCAGCTGCGGAGCAAACGGGATGAGTTCTGGGACACAGCGCCTGCCTTCGAGGGCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp TGGCTCGAACCTGCTTCGGGAGACAGGCAGGGTGAGGGCCCTGTTCGCCTTTTCCCTCCTGGTTGGCCCTaGTGGCTCGAACCTGCTTCG +
Preference number: 5 (lower is better)
Translates to: WLEPASGDRQGEGPVRLFPPGWP*WLEPAS
Trigger: CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGG...GAAAAGGCGAACAGGGCCCTCACCCTGCCTGTCTCCCGAAGCAGGTTCGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp GAGAGGCAGAGGCCCGCCTCAGGCTTCCCAAGCCCTGGGGCTCACGGGTGGTTCAAATCTTTCTGGATCTaGGTCTCCTGGAGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: ERQRPASGFPSPGAHGWFKSFWI*VSWSRV
Trigger: CACACGGCTCCAGGAGACCAAGATCCAGAAAGATTT...GAACCACCCGTGAGCCCCAGGGCTTGGGAAGCCTGAGGCGGGCCTCTGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS-3UTR CAA 90 bp AGATCTGGGCTCCAGGGGCCTCCTGGTTGGCCCTTGTGGCTCGAACCTGCTTCGTTTTCTCTGACAAGGTaGCAAGGCCCGTGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: RSGLQGPPGWPLWLEPASFSLTR*QGPCVA
Trigger: AGCCACACACGGGCCTTGCAACCTTGTCAGAGAAAA...CGAAGCAGGTTCGAGCCACAAGGGCCAACCAGGAGGCCCCTGGAGCCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS CCA 90 bp GGTGGTGGGGGCTGGTTGATGATGACCTGGATGACAAAATCTTTCTaGATCTTGGTCTCCTGGAGCCGTGTGCGGTCTGTGAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: GGGGWLMMTWMTKSF*ILVSWSRVRSVSSF
Trigger: GAAGCTGCTCACAGACCGCACACGGCTCCAGGAGACCAAGATCCAGAAAGATTTTGTCATCCAGGTCATCATCAACCAGCCCCCACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS CCA 72 bp GTCGGCTGCTCAGCGGACGGCGGCGTCCCGGGTCAATaGCTCCGGCCGCCCGGCATCGGGCGCTCCCCGATC +
Preference number: 6 (lower is better)
Translates to: VGCSADGGVPGQ*LRPPGIGRSPI
Trigger: GATCGGGGAGCGCCCGATGCCGGGCGGCCGGAGCCATTGACCCGGGACGCCGCCGTCCGCTGAGCAGCCGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 72 bp CAGTCCCCATGCACCGGAGGCGGCGGGGTGGTCGGCTaGTCAGCGGACGGCGGCGTCCCGGGTCAATGGCTC +
Preference number: 6 (lower is better)
Translates to: QSPCTGGGGVVG*SADGGVPGQWL
Trigger: GAGCCATTGACCCGGGACGCCGCCGTCCGCTGAGCAGCCGACCACCCCGCCGCCTCCGGTGCATGGGGACTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS CAA 90 bp AGCTGCCCCACTGTGTCGGGCAGGCTGGCGCTGAGCCTCACGTCCTaGCCCGTGGACAGGCGCACCTTCAGCGGGAACTCACGGCGCACG +
Preference number: 6 (lower is better)
Translates to: SCPTVSGRLALSLTS*PVDRRTFSGNSRRT
Trigger: CGTGCGCCGTGAGTTCCCGCTGAAGGTGCGCCTGTCCACGGGCAAGGACGTGAGGCTCAGCGCCAGCCTGCCCGACACAGTGGGGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 72 bp CACCGCTGCCACGATGGCTCGATGCCCTCCTGGGCGTaGAGCTGCCTCTTGAGCTGCCCCACTGTGTCGGGC +
Preference number: 6 (lower is better)
Translates to: HRCHDGSMPSWA*SCLLSCPTVSG
Trigger: GCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGCAGCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 72 bp TGCCACGATGGCTCGATGCCCTCCTGGGCGTGCAGCTaGCTCTTGAGCTGCCCCACTGTGTCGGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CHDGSMPSWACS*LLSCPTVSGRL
Trigger: CAGCCTGCCCGACACAGTGGGGCAGCTCAAGAGGCAGCTGCACGCCCAGGAGGGCATCGAGCCATCGTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS TCA 72 bp CGTGGTCGTTGGCTTCAGCAGCATAGGCGGCAGCCTTaGGGGCATCCCAGATCTCCTTGCGGCCCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: RGRWLQQHRRQP*GHPRSPCGPRR
Trigger: CCTTCGAGGGCCGCAAGGAGATCTGGGATGCCCTCAAGGCTGCCGCCTATGCTGCTGAAGCCAACGACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS TCA 72 bp CTCCTCCGTGTGCTCCAGCAGCAGGTTCACCGGCGGTaGCAGGCAGTAGATGGGCAGCTGGTAGCGATTGCC +
Preference number: 6 (lower is better)
Translates to: LLRVLQQQVHRR*QAVDGQLVAIA
Trigger: GGCAATCGCTACCAGCTGCCCATCTACTGCCTGTCACCGCCGGTGAACCTGCTGCTGGAGCACACGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS GCA 72 bp CGAAGGCAGGCGCTGTGTCCCAGAACTCATCCCGTTTaGTCCGCAGCTGCCCGTCAGTCATGGGGTAGTCGC +
Preference number: 6 (lower is better)
Translates to: RRQALCPRTHPV*SAAARQSWGSR
Trigger: GCGACTACCCCATGACTGACGGGCAGCTGCGGAGCAAACGGGATGAGTTCTGGGACACAGCGCCTGCCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS TCA 72 bp TCTGGATCTTGGTCTCCTGGAGCCGTGTGCGGTCTGTaGGCAGCTTCCCGGAGAAGAACCACCGCTGCCACG +
Preference number: 6 (lower is better)
Translates to: SGSWSPGAVCGL*AASRRRTTAAT
Trigger: CGTGGCAGCGGTGGTTCTTCTCCGGGAAGCTGCTCACAGACCGCACACGGCTCCAGGAGACCAAGATCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370664.4
CDS CAA 90 bp GGGGGCTGGTTGATGATGACCTGGATGACAAAATCTTTCTGGATCTaGGTCTCCTGGAGCCGTGTGCGGTCTGTGAGCAGCTTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: GGWLMMTWMTKSFWI*VSWSRVRSVSSFPE
Trigger: CTCCGGGAAGCTGCTCACAGACCGCACACGGCTCCAGGAGACCAAGATCCAGAAAGATTTTGTCATCCAGGTCATCATCAACCAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370664.4