RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000144357

Ensembl transcript IDs: ENST00000272793.11, ENST00000392632.6, ENST00000430321.5, ENST00000439681.1, ENST00000444475.5, ENST00000465630.1, ENST00000474426.1, ENST00000477461.1, ENST00000487689.1

Found 637 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCAAATGCTGGAACTGGCCAATCCAGACAGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAACGTTGGCAGAAGTCCCAGGCAGCT +
Preference number: 1 (lower is better)
Translates to: IKCWNWPIQTGGTDE*MFCLVKRWQKSQAA
Trigger: AGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTTCCAGCATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CCA 90 bp TCCAGGATAACATGGAAGAACACTGTTAGCAAACTGCCTACAGAGTaGACACGTGAATTCTCCTTTGTCCACCGAGAAGCCCTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: SRITWKNTVSKLPTE*TREFSFVHREALKN
Trigger: GTTCTTCAGGGCTTCTCGGTGGACAAAGGAGAATTCACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGTTCTTCCATGTTATCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR GCA 90 bp TTTGTTTCTGAACTGATGCTTACTGGGAAAGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTTATGAGATCTTGTATGCTTTTGTTG +
Preference number: 1 (lower is better)
Translates to: FVSELMLTGKAPGRP*SSSTSFMRSCMLLL
Trigger: CAACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGCTTTCCCAGTAAGCATCAGTTCAGAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR TCA 90 bp GTTGTTCTTCATATCCCAGCTGTGGATTCATCTCTTCTAACTGGGTaGGCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCC +
Preference number: 1 (lower is better)
Translates to: VVLHIPAVDSSLLTG*AFSRDYTQSQCYKA
Trigger: GGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGCTCACCCAGTTAGAAGAGATGAATCCACAGCTGGGATATGAAGAACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR TCA 90 bp ATGGTATCTAGCAACAGAGTACATAAAGAGAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATAGTCTCTATATTTCTTCTGAGTGGT +
Preference number: 1 (lower is better)
Translates to: MVSSNRVHKEKIIVW*ARGLAIVSIFLLSG
Trigger: ACCACTCAGAAGAAATATAGAGACTATAGCAAGACCCCGGGCTCACCAGACAATGATTTTCTCTTTATGTACTCTGTTGCTAGATACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CCA 90 bp CCTTGGTGCAGACACTACAGGTTTTTCTGTGGTAGTACTGAAAAATaGTGTTATAATTCTCAGGCAACTGTAGTAGGTGTGGTAATTTCC +
Preference number: 1 (lower is better)
Translates to: PWCRHYRFFCGSTEK*CYNSQATVVGVVIS
Trigger: GGAAATTACCACACCTACTACAGTTGCCTGAGAATTATAACACCATTTTTCAGTACTACCACAGAAAAACCTGTAGTGTCTGCACCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR TCA 90 bp ACATGTACTCTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGATaGGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAG +
Preference number: 1 (lower is better)
Translates to: TCTLCVRVVASLRSG*AKGMLHHDKELEPQ
Trigger: CTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTCATCCAGATCTTAATGATGCCACAACCCTTACGCAAAGAGTACATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR GCA 90 bp GATGATAATTACCGATGCATTGATCAAAAGGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTTTG +
Preference number: 1 (lower is better)
Translates to: DDNYRCIDQKENTCS*TTVLRVQYTFTVTL
Trigger: CAAAGTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTCCTTTTGATCAATGCATCGGTAATTATCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR GCA 90 bp AACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTaGCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCAATTTT +
Preference number: 1 (lower is better)
Translates to: NKTFCQLCLHHLNTN*LLDESIQVLNWFNF
Trigger: AAAATTGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CCA 90 bp CTAGAGATGTCAATTAGCATTTTGCTCTTCAACCACACTTACAAATaGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTG +
Preference number: 1 (lower is better)
Translates to: LEMSISILLFNHTYK*SGIHNDQCKKYDRL
Trigger: CAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGTTGAAGAGCAAAATGCTAATTGACATCTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTACCTTTTGCCAGCTGTaGTTGCACCACCTGAACACA +
Preference number: 2 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFTFCQL*LHHLNT
Trigger: TGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGT...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTGAAAGCCTCACATCATaGACGGCTGCACAGGTATCC +
Preference number: 2 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTESLTS*TAAQVS
Trigger: GGATACCTGTGCAGCCGTTCATGATGTGAGGCTTTC...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR GCA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTTTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 2 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSAPGRP*SSSTSF
Trigger: AAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CAA 90 bp CCCTGCAGCTCCTCCACTTCCTTTATGAGATCTTGTATGCTTTTGTaGCTAGGACGTTGCCAAGGGTTATTTTCCACATTGCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: PCSSSTSFMRSCMLL*LGRCQGLFSTLLPG
Trigger: TCCTGGAAGCAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGGAGCTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAAGCGTGGCTCATTCATaGGGGTCATCACCACTGCGC +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSSVAHS*GSSPLR
Trigger: GCGCAGTGGTGATGACCCTCATGAATGAGCCACGCT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACTCTCTTCTAACTGGGTaGGCTTTCTCCAGGGATTAT +
Preference number: 2 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYSLLTG*AFSRDY
Trigger: ATAATCCCTGGAGAAAGCTCACCCAGTTAGAAGAGA...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 2 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTTTCCACCGAGAAGCCCTaGAGAACCTGGTCATTCCGT +
Preference number: 2 (lower is better)
Translates to: TQSQCYKAACARLIHETVSTEKP*RTWSFR
Trigger: ACGGAATGACCAGGTTCTTCAGGGCTTCTCGGTGGA...AACTGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTACAGAGTGGACACGTaGATTCTCCTTTGTCCACCG +
Preference number: 2 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVYRVDT*ILLCPP
Trigger: CGGTGGACAAAGGAGAATTCACGTGTCCACTCTGTA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTGTTTGGTAAAACGTTaGCAGAAGTCCCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TLFGNKRWACTESTSAQCCLVKR*QKSQAA
Trigger: AGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATCTCTTCTAACTGGGTaGGCTTTCTCCAGGGATTAT +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVSLLTG*AFSRDY
Trigger: ATAATCCCTGGAGAAAGCTCACCCAGTTAGAAGAGA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCGCGTGTTTCCAGGCTaGCCTATCTTCTTCGCTGCA +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSRVFPG*PIFFAA
Trigger: TGCAGCGAAGAAGATAGGTCAGCCTGGAAACACGCG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATA +
Preference number: 2 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVKIIVW*ARGLAI
Trigger: TATAGCAAGACCCCGGGCTCACCAGACAATGATTTT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR GCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACACACTGTTAGCAAACTaGCTACAGAGTGGACACGTG +
Preference number: 2 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNTLLAN*LQSGHV
Trigger: CACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGT...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAAGAATGCAGAAGCGTaGCTCATTCATGAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVKNAEA*LIHEGH
Trigger: ATGACCCTCATGAATGAGCCACGCTTCTGCATTCTT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR CAA 90 bp TGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACACAC +
Preference number: 2 (lower is better)
Translates to: CTTVLRVQYTFTVTL*LAAKSFQAYKSTTH
Trigger: GTGTGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCTGTGCTTGCACCACCTaGACACAAATTGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFCACTT*TQIASS
Trigger: CGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACA...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR TCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 2 (lower is better)
Translates to: AFSRDYTQSQCYKAACARTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCAATAAAAGGTGGGCATaGACGGAATCAACATCTGCC +
Preference number: 2 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVNKRWA*TESTSA
Trigger: GGCAGATGTTGATTCCGTGCATGCCCACCTTTTATT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCACCTTTTGCCAGCTGTaGTTGCACCACCTGAACACA +
Preference number: 2 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFTFCQL*LHHLNT
Trigger: TGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp AACTGGCCAATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTTGGTAAAATTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 2 (lower is better)
Translates to: NWPIQTGGTDEWMFCLVKLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...TTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTGTGCTTGCACCACCTaGACACAAATTGCCTCCTCG +
Preference number: 2 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNCACTT*TQIASS
Trigger: CGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACACACATGTACTCTTTTTaGGAGCTCCCGCGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: YTQSQCYKAACARLIHETHMYSF*ELPRVS
Trigger: GGAAACACGCGGGAGCTCTCAAAAAGAGTACATGTG...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTCCTCCACTTCCTTTATaGGATCTTGTATGCTTTTGT +
Preference number: 2 (lower is better)
Translates to: TLFGNKRWACTESTSAQCPPLPL*DLVCFC
Trigger: ACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGG...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCACGGAATCAACATCTaGCCAGTGTATGTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTHGINI*PVYVLK
Trigger: TTTAAGAACATACACTGGGCAGATGTTGATTCCGTG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGCACGGAATCAACATCTaGCCAGTGTATGTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWHGINI*PVYVLK
Trigger: TTTAAGAACATACACTGGGCAGATGTTGATTCCGTG...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTCACCTGAACACAAATTaGCTCCTCGATGAATCAATT +
Preference number: 2 (lower is better)
Translates to: TLFGNKRWACTESTSAQCHLNTN*LLDESI
Trigger: AATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCACATTGTCACGGCACTaGCCCAAAACTGAGGATGCT +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSTLSRH*PKTEDA
Trigger: AGCATCCTCAGTTTTGGGGCAGTGCCGTGACAATGT...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR GCA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCCACATCATGAACGGCTaGACAGGTATCCCAAGGGTA +
Preference number: 2 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFHIMNG*TGIPRV
Trigger: TACCCTTGGGATACCTGTGCAGCCGTTCATGATGTG...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAATTCTTCTTCTTCCTaGCAGCTAGGTAAATCTTCC +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVNSSSS*QLGKSS
Trigger: GGAAGATTTACCTAGCTGCCAGGAAGAAGAAGAATT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTGGTDE*MFCLVK
Trigger: TTTTACCAAACAGAACATCCATTCATCAGTGCCTCC...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTCCATTTTGACTCTTaGATAAGCAAGGCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTFHFDS*ISKAFP
Trigger: AGGAAAGGCCTTGCTTATCCAAGAGTCAAAATGGAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTGGTAGTACTGAAAAATaGTGTTATAATTCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFGSTEK*CYNSQA
Trigger: TGCCTGAGAATTATAACACCATTTTTCAGTACTACC...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACAGCCCATTGTAATGTaGACCCCATCTTTTATTGAT +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVQPIVM*TPSFID
Trigger: ATCAATAAAAGATGGGGTCCACATTACAATGGGCTG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CAA 90 bp CTCCACTTCCTTTATGAGATCTTGTATGCTTTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCACATTGCTTCCAGGATAACATGGAAG +
Preference number: 2 (lower is better)
Translates to: LHFLYEILYAFVART*PRVIFHIASRITWK
Trigger: CTTCCATGTTATCCTGGAAGCAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGATCTCATAAAGGAAGTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR TCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACCTGAACCTCTTGAGCTaGAAGGAAGTTCCAAAATTT +
Preference number: 2 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNLNLLS*KEVPKF
Trigger: AAATTTTGGAACTTCCTTTCAGCTCAAGAGGTTCAG...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGTCGAACAGAATCATTaGCTCTTACAGAAAGTTATC +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVVEQNH*LLQKVI
Trigger: GATAACTTTCTGTAAGAGTCAATGATTCTGTTCGAC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTACTGCCAAGAGACATaGACTATCCTTAAAATAACG +
Preference number: 2 (lower is better)
Translates to: TLFGNKRWACTESTSAQCYCQET*TILKIT
Trigger: CGTTATTTTAAGGATAGTTCATGTCTCTTGGCAGTA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTCCTTCTCATAGAGTaGGTTTTAGCTCAATCATTC +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVFLLIE*VLAQSF
Trigger: GAATGATTGAGCTAAAACCCACTCTATGAGAAGGAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGTTCCTTCTCATAGAGTaGGTTTTAGCTCAATCATTC +
Preference number: 2 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWFLLIE*VLAQSF
Trigger: GAATGATTGAGCTAAAACCCACTCTATGAGAAGGAA...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGATCATGATAAAGAATTaGAACCTCAGGCTGTTGTTC +
Preference number: 2 (lower is better)
Translates to: AFSRDYTQSQCYKAACARIMIKN*NLRLLF
Trigger: GAACAACAGCCTGAGGTTCCAATTCTTTATCATGAT...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CAA 90 bp ATACATGAAACAGCTGATTTAAACAAGACCTTTTGCCAGCTGTGCTaGCACCACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAA +
Preference number: 2 (lower is better)
Translates to: IHETADLNKTFCQLC*HHLNTNCLLDESIQ
Trigger: TTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATCAGCTGTTTCATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATCTAGTTTAGCAGCATaGATGTATGTATTCAAGTAC +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVSSLAA*MYVFKY
Trigger: GTACTTGAATACATACATGCATGCTGCTAAACTAGA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp TTCTGCATCACATGTACTCTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGATATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: FCITCTLCVRVVASLRSGYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...TCCAGATCTTAATGATGCCACAACCCTTACGCAAAGAGTACATGTGATGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTG +
Preference number: 2 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSENTCS*TTVLRV
Trigger: CACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAAAGAATGCAGAAGCGTaGCTCATTCATGAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSKNAEA*LIHEGH
Trigger: ATGACCCTCATGAATGAGCCACGCTTCTGCATTCTT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 2 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTGTTTGGTAAAACGTTaGCAGAAGTCCCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNCLVKR*QKSQAA
Trigger: AGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACAAATTTGTTTCTGAACTaGTGCTTACTGGGAAAGCTC +
Preference number: 2 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTNLFLN*CLLGKL
Trigger: GAGCTTTCCCAGTAAGCATCAGTTCAGAAACAAATT...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR GCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACACACGGAATCAACATCTaGCCAGTGTATGTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTHGINI*PVYVLK
Trigger: TTTAAGAACATACACTGGGCAGATGTTGATTCCGTG...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACAAATAGGGTTAACCATTaGACATTCCTGAGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTNRVNH*TFLSSF
Trigger: GAAGGAACTCAGGAATGTGCAATGGTTAACCCTATT...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCACAATGCAGGTAAAGTaGTCTTTGCGTAAGGGTTGT +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSTMQVK*SLRKGC
Trigger: ACAACCCTTACGCAAAGACCACTTTACCTGCATTGT...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR CCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACAGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ATCTTGTATGCTTTTGTTGCTAGGACGTTGCCAAGGGTTATTTTCCACATTGCTCACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 2 (lower is better)
Translates to: ILYAFVARTLPRVIFHIAHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...AGCAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCTGAACCTCTTGAGCTaGAAGGAAGTTCCAAAATTT +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSLNLLS*KEVPKF
Trigger: AAATTTTGGAACTTCCTTTCAGCTCAAGAGGTTCAG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCTGAACCTCTTGAGCTaGAAGGAAGTTCCAAAATTT +
Preference number: 2 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSLNLLS*KEVPKF
Trigger: AAATTTTGGAACTTCCTTTCAGCTCAAGAGGTTCAG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCACGGAATCAACATCTaGCCAGTGTATGTTCTTAAA +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSHGINI*PVYVLK
Trigger: TTTAAGAACATACACTGGGCAGATGTTGATTCCGTG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACATATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: YTQSQCYKAACARLIHETYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGTGAGCCCGGGGTCTTaGTATAGTCTCTATATTTCT +
Preference number: 2 (lower is better)
Translates to: TTLTNGLVFITINAKSMTVSPGS*YSLYIS
Trigger: AGAAATATAGAGACTATAGCAAGACCCCGGGCTCAC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 2 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACATTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 2 (lower is better)
Translates to: YTQSQCYKAACARLIHETFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 2 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGCTTCCAGGATAACATaGAAGAACACTGTTAGCAAA +
Preference number: 2 (lower is better)
Translates to: YTQSQCYKAACARLIHETASRIT*KNTVSK
Trigger: TTTGCTAACAGTGTTCTTCCATGTTATCCTGGAAGC...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATCATTGGAGGTTAGATaGTATCTAGCAACAGAGTAC +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSSLEVR*YLATEY
Trigger: GTACTCTGTTGCTAGATACCATCTAACCTCCAATGA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCACTTCACATCCATATaGACAACCATAAAACATTCC +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSHFTSI*TTIKHS
Trigger: GGAATGTTTTATGGTTGTGCATATGGATGTGAAGTG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATTCGTAAGACTTTTCTaGATCACATGTACTCTTTGC +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSFVRLF*ITCTLC
Trigger: GCAAAGAGTACATGTGATGCAGAAAAGTCTTACGAA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTATAATATCAAATGCTaGAACTGGCCAATCCAGACA +
Preference number: 2 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSYNIKC*NWPIQT
Trigger: TGTCTGGATTGGCCAGTTCCAGCATTTGATATTATA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: TTLTNGLVFITINAKSMTVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACAAAGTACCAGGGATTaGTTGATAGCACTATATATT +
Preference number: 2 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSQSTRD*LIALYI
Trigger: AATATATAGTGCTATCAAGCAATCCCTGGTACTTTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTGTCAATTAGCATTTTaGTCTTCAACCACACTTACA +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSCQLAF*SSTTLT
Trigger: TGTAAGTGTGGTTGAAGAGCAAAATGCTAATTGACA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTCTAGTTTAGCAGCATaGATGTATGTATTCAAGTAC +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSSSLAA*MYVFKY
Trigger: GTACTTGAATACATACATGCATGCTGCTAAACTAGA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAATAGGGTTAACCATTaGACATTCCTGAGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: TTLTNGLVFITINAKSMTNRVNH*TFLSSF
Trigger: GAAGGAACTCAGGAATGTGCAATGGTTAACCCTATT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTTTATGGTTCATTTCTaGGGAAGTCTGAGCATTTCT +
Preference number: 2 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNFMVHF*GSLSIS
Trigger: AGAAATGCTCAGACTTCCCCAGAAATGAACCATAAA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATTATATAACAAGCCATaGAAGTCCAAAGTACCAGGG +
Preference number: 2 (lower is better)
Translates to: TTLTNGLVFITINAKSMTLYNKP*KSKVPG
Trigger: CCCTGGTACTTTGGACTTCCATGGCTTGTTATATAA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 2 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 2 (lower is better)
Translates to: TTLTNGLVFITINAKSMTISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 2 (lower is better)
Translates to: TTLTNGLVFITINAKSMTNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR TCA 72 bp GGTTTGCCTCGCCTAAGATCCCGGTCTTCCTCTCCATaGGCATCCAAATACACGGAACCCCAGAGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: GLPRLRSRSSSP*ASKYTEPQRQK
Trigger: CTTCTGCCTCTGGGGTTCCGTGTATTTGGATGCTCATGGAGAGGAAGACCGGGATCTTAGGCGAGGCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR GCA 72 bp GAACTGATGCTTACTGGGAAAGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTTATGAGATCTTGTATG +
Preference number: 3 (lower is better)
Translates to: ELMLTGKAPGRP*SSSTSFMRSCM
Trigger: CATACAAGATCTCATAAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGCTTTCCCAGTAAGCATCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CAA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACCAGGTAAAGTGGTCTTaGCGTAAGGGTTGTGGCATC +
Preference number: 3 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYQVKWS*RKGCGI
Trigger: GATGCCACAACCCTTACGCAAAGACCACTTTACCTG...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR TCA 72 bp GCATCCAAATACACGGAACCCCAGAGGCAGAAGCGGTaGCCTCGAATGATGATAATTACCGATGCATTGATC +
Preference number: 3 (lower is better)
Translates to: ASKYTEPQRQKR*PRMMIITDALI
Trigger: GATCAATGCATCGGTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CCA 72 bp ACATGGAAGAACACTGTTAGCAAACTGCCTACAGAGTaGACACGTGAATTCTCCTTTGTCCACCGAGAAGCC +
Preference number: 3 (lower is better)
Translates to: TWKNTVSKLPTE*TREFSFVHREA
Trigger: GGCTTCTCGGTGGACAAAGGAGAATTCACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGTTCTTCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CAA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFEWMFC*VKRWQK
Trigger: CTTCTGCCAACGTTTTACCAAACAGAACATCCATTC...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGGGATCTTTAGGAACCTaGGTGCAGACACTACAGGTT +
Preference number: 3 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWGSLGT*VQTLQV
Trigger: AACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCC...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTCTTGTATGCTTTTGTaGCTAGGACGTTGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTSCMLL*LGRCQG
Trigger: CCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CAA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTTTTGCCAGCTGTGCTaGCACCACCTGAACACAAAT +
Preference number: 3 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNFCQLC*HHLNTN
Trigger: ATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAA...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCA +
Preference number: 3 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVFKQDL*PAVLAP
Trigger: TGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR CAA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWTFTVT*LLAAKS
Trigger: GGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGT...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTAGATCTTGTATGCTTTaGTTGCTAGGACGTTGCCAA +
Preference number: 3 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTRSCML*LLGRCQ
Trigger: TTGGCAACGTCCTAGCAACAAAAGCATACAAGATCT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACCTGTTTGGTAAAACGTaGGCAGAAGTCCCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNLFGKT*AEVPGS
Trigger: GCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAG...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVFTVTL*LAAKSF
Trigger: AAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp TTCTGCATCACATGTACTCTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGATGTGTGACCACAGGTTaGTACATAAACACCTCCTTC +
Preference number: 3 (lower is better)
Translates to: FCITCTLCVRVVASLRSGCVTTG*YINTSF
Trigger: GAAGGAGGTGTTTATGTACAAACCTGTGGTCACACA...TCCAGATCTTAATGATGCCACAACCCTTACGCAAAGAGTACATGTGATGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR GCA 72 bp TTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTaGCTCCTCGATGAATCAATTCAAGTTCTAAATTGG +
Preference number: 3 (lower is better)
Translates to: FCQLCLHHLNTN*LLDESIQVLNW
Trigger: CCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR GCA 72 bp TACCGATGCATTGATCAAAAGGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTGCAGTACACATTCACA +
Preference number: 3 (lower is better)
Translates to: YRCIDQKENTCS*TTVLRVQYTFT
Trigger: TGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTCCTTTTGATCAATGCATCGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACCAAGCACCTAATTTaGGAAAGGCTTCATAATGTA +
Preference number: 3 (lower is better)
Translates to: TLFGNKRWACTESTSAQCTKHLI*ERLHNV
Trigger: TACATTATGAAGCCTTTCCAAAATTAGGTGCTTGGT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAACCAAGCACCTAATTTaGGAAAGGCTTCATAATGTA +
Preference number: 3 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVTKHLI*ERLHNV
Trigger: TACATTATGAAGCCTTTCCAAAATTAGGTGCTTGGT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTCACATGTACTCTTTTaGAGAGCTCCCGCGTGTTTC +
Preference number: 3 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSSHVLF*RAPACF
Trigger: GAAACACGCGGGAGCTCTCAAAAAGAGTACATGTGA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR-3UTR CAA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACATTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCAC +
Preference number: 3 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTFVART*PRVIFH
Trigger: GTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAA...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTCCTTTATGAGATCTaGTATGCTTTTGTTGCTAGG +
Preference number: 3 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVFLYEI*YAFVAR
Trigger: CCTAGCAACAAAAGCATACAAGATCTCATAAAGGAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CCA 72 bp GATGAGCAAAAGGGATGTTACATCATGATAAAGAATTaGAACCTCAGGCTGTTGTTCTTCATATCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: DEQKGCYIMIKN*NLRLLFFISQL
Trigger: CAGCTGGGATATGAAGAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTTTTGCCAGCTGTGCTaGCACCACCTGAACACAAAT +
Preference number: 3 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNFCQLC*HHLNTN
Trigger: ATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAAAGCAAGGCCTTTCCTaGTTCTGCATGTCTTTCAGT +
Preference number: 3 (lower is better)
Translates to: YTQSQCYKAACARLIHETKQGLS*FCMSFS
Trigger: ACTGAAAGACATGCAGAACAAGGAAAGGCCTTGCTT...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGGATCTTTAGGAACCTaGGTGCAGACACTACAGGTT +
Preference number: 3 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNGSLGT*VQTLQV
Trigger: AACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR TCA 72 bp AGCAACAGAGTACATAAAGAGAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATAGTCTCTATATTTCTT +
Preference number: 3 (lower is better)
Translates to: SNRVHKEKIIVW*ARGLAIVSIFL
Trigger: AAGAAATATAGAGACTATAGCAAGACCCCGGGCTCACCAGACAATGATTTTCTCTTTATGTACTCTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CCA 72 bp AACTGTAGTAGGTGTGGTAATTTCCATTTTGACTCTTaGATAAGCAAGGCCTTTCCTTGTTCTGCATGTCTT +
Preference number: 3 (lower is better)
Translates to: NCSRCGNFHFDS*ISKAFPCSACL
Trigger: AAGACATGCAGAACAAGGAAAGGCCTTGCTTATCCAAGAGTCAAAATGGAAATTACCACACCTACTACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACCAAAGTACCAGGGATaGCTTGATAGCACTATATAT +
Preference number: 3 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSPKYQG*LDSTIY
Trigger: ATATATAGTGCTATCAAGCAATCCCTGGTACTTTGG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR TCA 72 bp CTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGATaGGCAAAAGGGATGTTACATCATGATAAAGAATTG +
Preference number: 3 (lower is better)
Translates to: LCVRVVASLRSG*AKGMLHHDKEL
Trigger: CAATTCTTTATCATGATGTAACATCCCTTTTGCTCATCCAGATCTTAATGATGCCACAACCCTTACGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR TCA 72 bp GGAGACCAAGCAATAGGGTTAACCATTGCACATTCCTaGGTTCCTTCTTCATGGTATAACTTTCCTTTAAAT +
Preference number: 3 (lower is better)
Translates to: GDQAIGLTIAHS*VPSSWYNFPLN
Trigger: ATTTAAAGGAAAGTTATACCATGAAGAAGGAACTCAGGAATGTGCAATGGTTAACCCTATTGCTTGGTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR GCA 72 bp ATAAACAAAACCTTGTTTGGTAATAAAAGGTGGGCATaGACGGAATCAACATCTGCCCAGTGTATGTTCTTA +
Preference number: 3 (lower is better)
Translates to: INKTLFGNKRWA*TESTSAQCMFL
Trigger: TAAGAACATACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGTTTTGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACCAAGCACCTAATTTaGGAAAGGCTTCATAATGTA +
Preference number: 3 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTKHLI*ERLHNV
Trigger: TACATTATGAAGCCTTTCCAAAATTAGGTGCTTGGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACCAAGCACCTAATTTaGGAAAGGCTTCATAATGTA +
Preference number: 3 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTKHLI*ERLHNV
Trigger: TACATTATGAAGCCTTTCCAAAATTAGGTGCTTGGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
3UTR TCA 72 bp AAATGTCAAATAAATCACACCCACTCTAAGTATCAATaGATAGCTGATACGCATTGTTGGGAGAATCATTTC +
Preference number: 3 (lower is better)
Translates to: KCQINHTHSKYQ*IADTHCWENHF
Trigger: GAAATGATTCTCCCAACAATGCGTATCAGCTATTCATTGATACTTAGAGTGGGTGTGATTTATTTGACATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAGGGCCGCCTTGAGGTaGGCGGCGGTGGCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVRAALR*AAVAAL
Trigger: CAAGGCGGCCACCGCCGCGCACCTCAAGGCGGCCCT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCAGCTCCTCAGCACCTaGGCGGTTGTCCGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTQLLST*AVVRPA
Trigger: AGCCGGCCGGACAACCGCGCAGGTGCTGAGGAGCTG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGGGCAGCTCGGGCTGTaGCGGCTGCTGGCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSGQLGL*RLLAPD
Trigger: GTCGGGGGCCAGCAGCCGTCACAGCCCGAGCTGCCC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGTGTGGTCGCCCTGGTaGAAGCACTCGGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCVWSPW*KHSAHS
Trigger: GCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACAC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATCTCCCGCATCACGTTaGTGTCCCCGCAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVSPASR*CPRSRR
Trigger: CCTGCGACTGCGGGGACAGCAACGTGATGCGGGAGA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVAPGRP*SSSTSF
Trigger: AAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTAAGTCGTGTCCGGTGTaGTCGCCCTGGTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTKSCPV*SPWWKH
Trigger: GTGCTTCCACCAGGGCGACCACACCGGACACGACTT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAGCGTGGCTCATTCATaGGGGTCATCACCACTGCGC +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVSVAHS*GSSPLR
Trigger: GCGCAGTGGTGATGACCCTCATGAATGAGCCACGCT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCCGGTGTGGTCGCCCTaGTGGAAGCACTCGGCGCAC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSPVWSP*WKHSAH
Trigger: GTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
3UTR CAA 72 bp ATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAGTCCCAGGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IQTGGTDEWMFC*VKRWQKSQAAG
Trigger: GCCAGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACGGAAACCAACTGTCATaGCAACGTTCTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYGNQLS*QRSGPP
Trigger: GGGTGGACCAGAACGTTGTCATGACAGTTGGTTTCC...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTCCACCGAGAAGCCCTaGAGAACCTGGTCATTCCGT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTSTEKP*RTWSFR
Trigger: ACGGAATGACCAGGTTCTTCAGGGCTTCTCGGTGGA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGTCCACCGAGAAGCCCTaGAGAACCTGGTCATTCCGT +
Preference number: 4 (lower is better)
Translates to: AFSRDYTQSQCYKAACARSTEKP*RTWSFR
Trigger: ACGGAATGACCAGGTTCTTCAGGGCTTCTCGGTGGA...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTCGCGTGTTTCCAGGCTaGCCTATCTTCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCRVFPG*PIFFAA
Trigger: TGCAGCGAAGAAGATAGGTCAGCCTGGAAACACGCG...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACGCGTGTTTCCAGGCTaGCCTATCTTCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVRVFPG*PIFFAA
Trigger: TGCAGCGAAGAAGATAGGTCAGCCTGGAAACACGCG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR TCA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTCCTGCACCACAGTTCTaGGAGTGCAGTACACATTCA +
Preference number: 4 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFPAPQF*ECSTHS
Trigger: TGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGG...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGATACGATGCAATGCTaGGGTGGAGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCDTMQC*GGESQP
Trigger: GGGCTGTGACTCTCCACCTCAGCATTGCATCGTATC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCAGGCGCCCCCGGCCTaGCTGCGGAACATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSQAPPA*LRNMLK
Trigger: CTTCAACATGTTCCGCAGCCAGGCCGGGGGCGCCTG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGAAAGCCTCACATCATaGACGGCTGCACAGGTATCC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCESLTS*TAAQVS
Trigger: GGATACCTGTGCAGCCGTTCATGATGTGAGGCTTTC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTCCACCGAGAAGCCCTaGAGAACCTGGTCATTCCGT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVSTEKP*RTWSFR
Trigger: ACGGAATGACCAGGTTCTTCAGGGCTTCTCGGTGGA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATGTGCTTGCACCACCTaGACACAAATTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVCACTT*TQIASS
Trigger: CGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGATACGATGCAATGCTaGGGTGGAGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVDTMQC*GGESQP
Trigger: GGGCTGTGACTCTCCACCTCAGCATTGCATCGTATC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACACGCTCCAGCAGCGCCTaGAGCTCCTCAGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTRSSSA*SSSAPA
Trigger: CGCAGGTGCTGAGGAGCTGCAGGCGCTGCTGGAGCG...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACACATGCAGGGCGAGATaGCGCACGTCCGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNTCRAR*RTSGSG
Trigger: ACCGCTGCCGGACGTGCGGCATCTCGCCCTGCATGT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACACGGCGCACAGCGACATaGAGGGCGAGATGCCGCACG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTRRTAT*RARCRT
Trigger: CGTGCGGCATCTCGCCCTGCATGTCGCTGTGCGCCG...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGTTAAGGTCCTTTTCTaGTGGTCCATCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVVKVLF*WSISCW
Trigger: CCAGCAGCTGATGGACCATCAGAAAAGGACCTTAAC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTCCTGTTGCGCCTATaGAACCTTGAACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTFLLRL*NLEQPE
Trigger: CTCTGGCTGTTCAAGGTTTCATAGGCGCAACAGGAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTGGGACGAACCACCTaGTTTGCTTCACTGCTACTG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVLGRTT*FASLLL
Trigger: CAGTAGCAGTGAAGCAAATCAGGTGGTTCGTCCCAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTGTGCTTGCACCACCTaGACACAAATTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVCACTT*TQIASS
Trigger: CGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTCACATGTACTCTTTTTaGGAGCTCCCGCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCHMYSF*ELPRVS
Trigger: GGAAACACGCGGGAGCTCTCAAAAAGAGTACATGTG...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCCTGCACCACAGTTCTaGGAGTGCAGTACACATTCA +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTPAPQF*ECSTHS
Trigger: TGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACATTGTCACGGCACTaGCCCAAAACTGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCTLSRH*PKTEDA
Trigger: AGCATCCTCAGTTTTGGGGCAGTGCCGTGACAATGT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCACATCATGAACGGCTaGACAGGTATCCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTHIMNG*TGIPRV
Trigger: TACCCTTGGGATACCTGTGCAGCCGTTCATGATGTG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSAPGRP*SSSTSF
Trigger: AAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGACCTTTTGCCAGCTGTaGTTGCACCACCTGAACACA +
Preference number: 4 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWTFCQL*LHHLNT
Trigger: TGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGT...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGGTAGGCCACGAAGTTaGCTGTCCAGACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNGRPRS*LSRPGR
Trigger: GCGGCCTGGTCTGGACAGCCAACTTCGTGGCCTACC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTTGGGACGAACCACCTaGTTTGCTTCACTGCTACTG +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVLGRTT*FASLLL
Trigger: CAGTAGCAGTGAAGCAAATCAGGTGGTTCGTCCCAA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATA +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTKIIVW*ARGLAI
Trigger: TATAGCAAGACCCCGGGCTCACCAGACAATGATTTT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCAGAGGCAGAAGCGGTaGCCTCGAATGATGATAATT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTQRQKR*PRMMII
Trigger: AATTATCATCATTCGAGGTCACCGCTTCTGCCTCTG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCAGCGTGGCTCATTCATaGGGGTCATCACCACTGCGC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSSVAHS*GSSPLR
Trigger: GCGCAGTGGTGATGACCCTCATGAATGAGCCACGCT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACCAGCAGATGGCTCCTaGACACCATATACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVPADGS*TPYTSL
Trigger: TAAGCTTGTATATGGTGTGCAGGAGCCATCTGCTGG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTACACTGTTAGCAAACTaGCTACAGAGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTTLLAN*LQSGHV
Trigger: CACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLAPGRP*SSSTSF
Trigger: AAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGGCTGCGGAACATGTTaGAGTCGTGTCCGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNGCGTC*SRVRCG
Trigger: ACCACACCGGACACGACTTCAACATGTTCCGCAGCC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCGATGTAGTGGCAGATaGAAAGTGACTTGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTRCSGR*KVTWLG
Trigger: ACCTAACCAAGTCACTTTTCATCTGCCACTACATCG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGCAGACCATTTACTTaGAGTTTTGGGACGAACCAC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCSRPFT*SFGTNH
Trigger: GTGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTCTCTTCTAACTGGGTaGGCTTTCTCCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCSLLTG*AFSRDY
Trigger: ATAATCCCTGGAGAAAGCTCACCCAGTTAGAAGAGA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACACGCGTGTTTCCAGGCTaGCCTATCTTCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETRVFPG*PIFFAA
Trigger: TGCAGCGAAGAAGATAGGTCAGCCTGGAAACACGCG...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGATACGATGCAATGCTaGGGTGGAGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSDTMQC*GGESQP
Trigger: GGGCTGTGACTCTCCACCTCAGCATTGCATCGTATC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAGCGTGGCTCATTCATaGGGGTCATCACCACTGCGC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSVAHS*GSSPLR
Trigger: GCGCAGTGGTGATGACCCTCATGAATGAGCCACGCT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAACGAACCACCTGATTTaGTTCACTGCTACTGCGATT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVTNHLI*FTATAI
Trigger: AATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTACGAACCACCTGATTTaGTTCACTGCTACTGCGATT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTTNHLI*FTATAI
Trigger: AATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVENTCS*TTVLRV
Trigger: CACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAATAAAAGGTGGGCATaGACGGAATCAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCNKRWA*TESTSA
Trigger: GGCAGATGTTGATTCCGTGCATGCCCACCTTTTATT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACCCAGACTTCAGCTTTaGGAGTATACATGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVPRLQL*EYTCLV
Trigger: AACAAGGCATGTATACTCCCAAAGCTGAAGTCTGGG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTGTCCTTTTCTTATATaGAGGCCAGGGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTCPFLI*RPGISR
Trigger: CCTGGAAATCCCTGGCCTCCATATAAGAAAAGGACA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTGCCTCGGAAACCTGTaGTTCTGCCGTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSCLGNL*FCRGDL
Trigger: GAGATCACCACGGCAGAACCACAGGTTTCCGAGGCA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR CCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTGTTTGGTAAAACGTTaGCAGAAGTCCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVCLVKR*QKSQAA
Trigger: AGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR CAA 72 bp ACAGCTGATTTAAACAAGACCTTTTGCCAGCTGTGCTaGCACCACCTGAACACAAATTGCCTCCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: TADLNKTFCQLC*HHLNTNCLLDE
Trigger: TTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTGGTTTGTCAAAACCTaGGTAAGAACAGACCGCATT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTWFVKT*VRTDRI
Trigger: AATGCGGTCTGTTCTTACTCAGGTTTTGACAAACCA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCACGGGGTCAAACTCTTaGTCCCAGACTTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFTGSNS*SQTSAL
Trigger: CAAAGCTGAAGTCTGGGATCAAGAGTTTGACCCCGT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGGAAACCAACTGTCATaGCAACGTTCTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSGNQLS*QRSGPP
Trigger: GGGTGGACCAGAACGTTGTCATGACAGTTGGTTTCC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp TTCTGCATCACATGTACTCTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGAGCTAGTACTTGCAGGTaGGTCTCTCTTTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: FCITCTLCVRVVASLRSGASTCR*VSLYFR
Trigger: CCTGAAGTAAAGAGAGACTCACCTGCAAGTACTAGC...TCCAGATCTTAATGATGCCACAACCCTTACGCAAAGAGTACATGTGATGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGTTCTGCTACTAAACTaGAAACTTGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVVLLLN*KLELYQ
Trigger: CTGGTACAGCTCAAGTTTTCAGTTTAGTAGCAGAAC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCTTGGGACGAACCACCTaGTTTGCTTCACTGCTACTG +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFLGRTT*FASLLL
Trigger: CAGTAGCAGTGAAGCAAATCAGGTGGTTCGTCCCAA...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp AACTGGCCAATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTTGGTAAAAAGCAGACCATTTACTTaGAGTTTTGGGACGAACCAC +
Preference number: 4 (lower is better)
Translates to: NWPIQTGGTDEWMFCLVKSRPFT*SFGTNH
Trigger: GTGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCT...TTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCAAAGCTTTTCTGTCGTaGAGCAAACTCCGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVKAFLS*SKLRKQ
Trigger: TTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAGAAAGCCTCACATCATaGACGGCTGCACAGGTATCC +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSESLTS*TAAQVS
Trigger: GGATACCTGTGCAGCCGTTCATGATGTGAGGCTTTC...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCCACCGAGAAGCCCTaGAGAACCTGGTCATTCCGT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSTEKP*RTWSFR
Trigger: ACGGAATGACCAGGTTCTTCAGGGCTTCTCGGTGGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACGCGTGTTTCCAGGCTaGCCTATCTTCTTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLRVFPG*PIFFAA
Trigger: TGCAGCGAAGAAGATAGGTCAGCCTGGAAACACGCG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGATACGATGCAATGCTaGGGTGGAGAGTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLDTMQC*GGESQP
Trigger: GGGCTGTGACTCTCCACCTCAGCATTGCATCGTATC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAGCGTGGCTCATTCATaGGGGTCATCACCACTGCGC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTSVAHS*GSSPLR
Trigger: GCGCAGTGGTGATGACCCTCATGAATGAGCCACGCT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGACTCAAATTCCACATaGTCGTTTAGTTCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVDSNST*SFSSRL
Trigger: CAAGCGAGAACTAAACGAGCATGTGGAATTTGAGTC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACGACCTCTCATGCTCTaGATCAAGTACTGTATTTTG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVRPLML*IKYCIL
Trigger: CAAAATACAGTACTTGATGCAGAGCATGAGAGGTCG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAGGAAACCTGTGGTTCTaGCGTGGTGATCTCCATAGG +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSGNLWF*RGDLHR
Trigger: CCTATGGAGATCACCACGGCAGAACCACAGGTTTCC...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTGTTGCTAGGACGTTaGCAAGGGTTATTTTCCACA +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTLLLGR*QGLFST
Trigger: TGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GATTTAAACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCTTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: DLNKTFCQLCLHHLNTNCLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...GCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR GCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACTATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAACCCACATATTGCTGTaGATTTCTGCAAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVTHILL*ISARLA
Trigger: AGCAAGTCTTGCAGAAATCCACAGCAATATGTGGGT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTAAACTGCCTACAGAGTaGACACGTGAATTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTKLPTE*TREFSF
Trigger: AAAGGAGAATTCACGTGTCCACTCTGTAGGCAGTTT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAAACTGCCTACAGAGTaGACACGTGAATTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVKLPTE*TREFSF
Trigger: AAAGGAGAATTCACGTGTCCACTCTGTAGGCAGTTT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACAGATGCAATGCTGAGGTaGAGAGTCACAGCCCATTGT +
Preference number: 4 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTDAMLR*RVTAHC
Trigger: ACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp AATCATTGTCTGGTGAGCCCGGGGTCTTGCTATAGTCTCTATATTTCTTCTGAGCCACCCAATCTGCTCTaGGTACGTTGCTTAATTGAT +
Preference number: 4 (lower is better)
Translates to: NHCLVSPGSCYSLYISSEPPNLL*VRCLID
Trigger: ATCAATTAAGCAACGTACCCAGAGCAGATTGGGTGG...CTCAGAAGAAATATAGAGACTATAGCAAGACCCCGGGCTCACCAGACAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CAA 72 bp ATGAAACAGTTAAACAAGACCTTTTGCCAGCTGTGCTaGCACCACCTGAACACAAATTGCCTCCTCGATGAA +
Preference number: 4 (lower is better)
Translates to: MKQLNKTFCQLC*HHLNTNCLLDE
Trigger: TTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAACTGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGTAACTAACAAACCGTaGTCCTCCAAAAATCTCTTG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVVTNKP*SSKNLL
Trigger: CAAGAGATTTTTGGAGGATCACGGTTTGTTAGTTAC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCCTACCATCTCGGCCCTaGGAATCTCATCATCAGACA +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSLPSRP*ESHHQT
Trigger: TGTCTGATGATGAGATTCTCAGGGCCGAGATGGTAG...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACTCTTGTAAAGCAGAGTaGATAGCACAATGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYSCKAE*IAQCVK
Trigger: CTTTACACATTGTGCTATTCACTCTGCTTTACAAGA...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp AACTGGCCAATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTTGGTAAAAGTTCTGCTACTAAACTaGAAACTTGAGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: NWPIQTGGTDEWMFCLVKVLLLN*KLELYQ
Trigger: CTGGTACAGCTCAAGTTTTCAGTTTAGTAGCAGAAC...TTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATGTGCTTGCACCACCTaGACACAAATTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLCACTT*TQIASS
Trigger: CGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCCTGCACCACAGTTCTaGGAGTGCAGTACACATTCA +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSPAPQF*ECSTHS
Trigger: TGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 4 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGCTGAACCTCTTGAGCTaGAAGGAAGTTCCAAAATTT +
Preference number: 4 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWLNLLS*KEVPKF
Trigger: AAATTTTGGAACTTCCTTTCAGCTCAAGAGGTTCAG...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGATTTCTGCAAGACTTaGTTGAATTTGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVDFCKT*LNLEWV
Trigger: CACCCACTCCAAATTCAAGCAAGTCTTGCAGAAATC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGTATACATGCCTTGTTaGATAGAACCTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVVYMPC*IEPPGS
Trigger: TGAACCTGGAGGTTCTATGCAACAAGGCATGTATAC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTTGACACTAAGTTACTaGCAGGAAACCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCLTLSY*QETNCH
Trigger: ATGACAGTTGGTTTCCTGGCAGTAACTTAGTGTCAA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATCCGCAAGCAATTTCTaGTGCCTCTCTCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSSASNF*CLSLAF
Trigger: GAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTCCGCAAGCAATTTCTaGTGCCTCTCTCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSSASNF*CLSLAF
Trigger: GAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGGAAACCTGTGGTTCTaGCGTGGTGATCTCCATAGG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLGNLWF*RGDLHR
Trigger: CCTATGGAGATCACCACGGCAGAACCACAGGTTTCC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACATTGTCACGGCACTaGCCCAAAACTGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTLSRH*PKTEDA
Trigger: AGCATCCTCAGTTTTGGGGCAGTGCCGTGACAATGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCACATTGTCACGGCACTaGCCCAAAACTGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFTLSRH*PKTEDA
Trigger: AGCATCCTCAGTTTTGGGGCAGTGCCGTGACAATGT...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACACATCATGAACGGCTaGACAGGTATCCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSHIMNG*TGIPRV
Trigger: TACCCTTGGGATACCTGTGCAGCCGTTCATGATGTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTTGTTGCTAGGACGTTaGCAAGGGTTATTTTCCACA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVLLLGR*QGLFST
Trigger: TGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAATAGGGTTAACCATTaGACATTCCTGAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVNRVNH*TFLSSF
Trigger: GAAGGAACTCAGGAATGTGCAATGGTTAACCCTATT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACCACTTCACATCCATATaGACAACCATAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYHFTSI*TTIKHS
Trigger: GGAATGTTTTATGGTTGTGCATATGGATGTGAAGTG...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTTCTAGTTTAGCAGCATaGATGTATGTATTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFSSLAA*MYVFKY
Trigger: GTACTTGAATACATACATGCATGCTGCTAAACTAGA...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACATCACATGTACTCTTTaGGTAAGGGTTGTGGCATCA +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNITCTL*VRVVAS
Trigger: TGATGCCACAACCCTTACGCAAAGAGTACATGTGAT...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCATTCATACACAGCTaGGCTACCATCTCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSFIHS*ATISAL
Trigger: CAGGGCCGAGATGGTAGCCCAGCTGTGTATGAATGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATGCCTCGGAAACCTGTaGTTCTGCCGTGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTCLGNL*FCRGDL
Trigger: GAGATCACCACGGCAGAACCACAGGTTTCCGAGGCA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR CCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGGCTTCCAGGATAACATaGAAGAACACTGTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: AFSRDYTQSQCYKAACARASRIT*KNTVSK
Trigger: TTTGCTAACAGTGTTCTTCCATGTTATCCTGGAAGC...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCACAATGCAGGTAAAGTaGTCTTTGCGTAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVTMQVK*SLRKGC
Trigger: ACAACCCTTACGCAAAGACCACTTTACCTGCATTGT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AFSRDYTQSQCYKAACARVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAGATGCAATGCTGAGGTaGAGAGTCACAGCCCATTGT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSDAMLR*RVTAHC
Trigger: ACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGATGCAATGCTGAGGTaGAGAGTCACAGCCCATTGT +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSDAMLR*RVTAHC
Trigger: ACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
3UTR CAA 72 bp AGCTCCTCCACTTCCTTTATGAGATCTTGTATGCTTTaGTTGCTAGGACGTTGCCAAGGGTTATTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SSSTSFMRSCML*LLGRCQGLFST
Trigger: TGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
3UTR CAA 72 bp GCAAGGCTAATACATGAAACAGTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCACCTGAACACAAATTG +
Preference number: 4 (lower is better)
Translates to: ARLIHETVKQDL*PAVLAPPEHKL
Trigger: CAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAACTGTTTCATGTATTAGCCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGATCTGGAAGCATGTTaGGTAAGAAAGTTACCATCT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVDLEAC*VRKLPS
Trigger: AGATGGTAACTTTCTTACTCAACATGCTTCCAGATC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATGGAATTACAGAAATaGGACTGGACATACGTCATG +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVMELQK*DWTYVM
Trigger: CATGACGTATGTCCAGTCTCATTTCTGTAATTCCAT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACGGGGTCAAACTCTTaGTCCCAGACTTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTGSNS*SQTSAL
Trigger: CAAAGCTGAAGTCTGGGATCAAGAGTTTGACCCCGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATCTTGTAAAGCAGAGTaGATAGCACAATGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVSCKAE*IAQCVK
Trigger: CTTTACACATTGTGCTATTCACTCTGCTTTACAAGA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGAAACCAACTGTCATaGCAACGTTCTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTGNQLS*QRSGPP
Trigger: GGGTGGACCAGAACGTTGTCATGACAGTTGGTTTCC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGCTAGTACTTGCAGGTaGGTCTCTCTTTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSASTCR*VSLYFR
Trigger: CCTGAAGTAAAGAGAGACTCACCTGCAAGTACTAGC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCAAAGCTTTTCTGTCGTaGAGCAAACTCCGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFKAFLS*SKLRKQ
Trigger: TTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATACAGAGTGGACACGTaGATTCTCCTTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLYRVDT*ILLCPP
Trigger: CGGTGGACAAAGGAGAATTCACGTGTCCACTCTGTA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCCCTCCACTTCCTTTATaGGATCTTGTATGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVPPLPL*DLVCFC
Trigger: ACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGG...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATA +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETKIIVW*ARGLAI
Trigger: TATAGCAAGACCCCGGGCTCACCAGACAATGATTTT...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATGTGCTTGCACCACCTaGACACAAATTGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTCACTT*TQIASS
Trigger: CGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACCACATGTACTCTTTTTaGGAGCTCCCGCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNHMYSF*ELPRVS
Trigger: GGAAACACGCGGGAGCTCTCAAAAAGAGTACATGTG...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACACATGTACTCTTTTTaGGAGCTCCCGCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLHMYSF*ELPRVS
Trigger: GGAAACACGCGGGAGCTCTCAAAAAGAGTACATGTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACCTGCACCACAGTTCTaGGAGTGCAGTACACATTCA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLPAPQF*ECSTHS
Trigger: TGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACAGAGGCAGAAGCGGTaGCCTCGAATGATGATAATT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSQRQKR*PRMMII
Trigger: AATTATCATCATTCGAGGTCACCGCTTCTGCCTCTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGGTCGAACAGAATCATTaGCTCTTACAGAAAGTTATC +
Preference number: 4 (lower is better)
Translates to: AFSRDYTQSQCYKAACARVEQNH*LLQKVI
Trigger: GATAACTTTCTGTAAGAGTCAATGATTCTGTTCGAC...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp AACTGGCCAATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTTGGTAAAAAATTTGTTTCTGAACTaGTGCTTACTGGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: NWPIQTGGTDEWMFCLVKNLFLN*CLLGKL
Trigger: GAGCTTTCCCAGTAAGCATCAGTTCAGAAACAAATT...TTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTTGACACTAAGTTACTaGCAGGAAACCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVLTLSY*QETNCH
Trigger: ATGACAGTTGGTTTCCTGGCAGTAACTTAGTGTCAA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTCCGCAAGCAATTTCTaGTGCCTCTCTCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNSASNF*CLSLAF
Trigger: GAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACACATCATGAACGGCTaGACAGGTATCCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLHIMNG*TGIPRV
Trigger: TACCCTTGGGATACCTGTGCAGCCGTTCATGATGTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCACACTGTTAGCAAACTaGCTACAGAGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSTLLAN*LQSGHV
Trigger: CACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACACTGTTAGCAAACTaGCTACAGAGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTLLAN*LQSGHV
Trigger: CACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp ACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTTGTGAGCCCGGGGTCTTaGTATAGTCTCTATATTTCT +
Preference number: 4 (lower is better)
Translates to: TQSQCYKAACARLIHETVVSPGS*YSLYIS
Trigger: AGAAATATAGAGACTATAGCAAGACCCCGGGCTCAC...AACTGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCCACCTGAACACAAATTaGCTCCTCGATGAATCAATT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVHLNTN*LLDESI
Trigger: AATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GATTTAAACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCCACCTGAACACAAATTaGCTCCTCGATGAATCAATT +
Preference number: 4 (lower is better)
Translates to: DLNKTFCQLCLHHLNTNCHLNTN*LLDESI
Trigger: AATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG...GCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACCTTTTGCCAGCTGTaGTTGCACCACCTGAACACA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTFCQL*LHHLNT
Trigger: TGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGAGTTATAATATCAAATaGTGGAACTGGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: AFSRDYTQSQCYKAACARSYNIK*WNWPIQ
Trigger: CTGGATTGGCCAGTTCCAGCATTTGATATTATAACT...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCAATAAAAGGTGGGCATaGACGGAATCAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFNKRWA*TESTSA
Trigger: GGCAGATGTTGATTCCGTGCATGCCCACCTTTTATT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACACTTCACATCCATATaGACAACCATAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVHFTSI*TTIKHS
Trigger: GGAATGTTTTATGGTTGTGCATATGGATGTGAAGTG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACTAGTACCAGCAGATaGCTCCTGCACACCATATAC +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTSTSR*LLHTIY
Trigger: GTATATGGTGTGCAGGAGCCATCTGCTGGTACTAGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp ATCTTGTATGCTTTTGTTGCTAGGACGTTGCCAAGGGTTATTTTCCACATTGCTTGTCCTTTTCTTATATaGAGGCCAGGGATTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILYAFVARTLPRVIFHIACPFLI*RPGISR
Trigger: CCTGGAAATCCCTGGCCTCCATATAAGAAAAGGACA...AGCAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTTCAGGAGCAGTCTCTaGAACTCTTACTCTAACATA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVFRSSL*NSYSNI
Trigger: TATGTTAGAGTAAGAGTTCCAGAGACTGCTCCTGAA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAATCATGATAAAGAATTaGAACCTCAGGCTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVIMIKN*NLRLLF
Trigger: GAACAACAGCCTGAGGTTCCAATTCTTTATCATGAT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTGTTTGGTAAAACGTTaGCAGAAGTCCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSCLVKR*QKSQAA
Trigger: AGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVGGTDE*MFCLVK
Trigger: TTTTACCAAACAGAACATCCATTCATCAGTGCCTCC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNGGTDE*MFCLVK
Trigger: TTTTACCAAACAGAACATCCATTCATCAGTGCCTCC...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGATGCAATGCTGAGGTaGAGAGTCACAGCCCATTGT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLDAMLR*RVTAHC
Trigger: ACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTTTATGGTTCATTTCTaGGGAAGTCTGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCFMVHF*GSLSIS
Trigger: AGAAATGCTCAGACTTCCCCAGAAATGAACCATAAA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCTTTCTCCAGGGATTATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGTTTATGGTTCATTTCTaGGGAAGTCTGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: AFSRDYTQSQCYKAACARFMVHF*GSLSIS
Trigger: AGAAATGCTCAGACTTCCCCAGAAATGAACCATAAA...CCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATAATCCCTGGAGAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTTAAGAATGCAGAAGCGTaGCTCATTCATGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: TQSQCYKAACARLIHETVKNAEA*LIHEGH
Trigger: ATGACCCTCATGAATGAGCCACGCTTCTGCATTCTT...AACTGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTTATATAACAAGCCATaGAAGTCCAAAGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNLYNKP*KSKVPG
Trigger: CCCTGGTACTTTGGACTTCCATGGCTTGTTATATAA...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CAA 72 bp GTTCTGAGAGTGCAGTACACATTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGT +
Preference number: 4 (lower is better)
Translates to: VLRVQYTFTVTL*LAAKSFQAYKS
Trigger: ACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGTGTACTGCACTCTCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CAA 72 bp ACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAA +
Preference number: 4 (lower is better)
Translates to: TVLRVQYTFTVT*LLAAKSFQAYK
Trigger: TTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGTGTACTGCACTCTCAGAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
3UTR CAA 72 bp TCCTCCACTTCCTTTATGAGATCTTGTATGCTTTTGTaGCTAGGACGTTGCCAAGGGTTATTTTCCACATTG +
Preference number: 4 (lower is better)
Translates to: SSTSFMRSCMLL*LGRCQGLFSTL
Trigger: CAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGCGCCTATGAAACCTTaGACAGCCAGAGAACTAGTA +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNAPMKP*TARELV
Trigger: TACTAGTTCTCTGGCTGTTCAAGGTTTCATAGGCGC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCAGCAGACCATTTACTTaGAGTTTTGGGACGAACCAC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSSRPFT*SFGTNH
Trigger: GTGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATACAGAGTGGACACGTaGATTCTCCTTTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTYRVDT*ILLCPP
Trigger: CGGTGGACAAAGGAGAATTCACGTGTCCACTCTGTA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKIIVW*ARGLAI
Trigger: TATAGCAAGACCCCGGGCTCACCAGACAATGATTTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACACACATGTACTCTTTTTaGGAGCTCCCGCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTHMYSF*ELPRVS
Trigger: GGAAACACGCGGGAGCTCTCAAAAAGAGTACATGTG...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACCAGAGGCAGAAGCGGTaGCCTCGAATGATGATAATT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNQRQKR*PRMMII
Trigger: AATTATCATCATTCGAGGTCACCGCTTCTGCCTCTG...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACAGAGGCAGAAGCGGTaGCCTCGAATGATGATAATT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLQRQKR*PRMMII
Trigger: AATTATCATCATTCGAGGTCACCGCTTCTGCCTCTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp GATTTAAACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCCACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 4 (lower is better)
Translates to: DLNKTFCQLCLHHLNTNCHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...GCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR TCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACGTCGAACAGAATCATTaGCTCTTACAGAAAGTTATC +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNVEQNH*LLQKVI
Trigger: GATAACTTTCTGTAAGAGTCAATGATTCTGTTCGAC...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCCCTCAGAGGATAAGGTaGCCATTCTCTTATTCAAGG +
Preference number: 4 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFPQRIR*PFSYSR
Trigger: CCTTGAATAAGAGAATGGTCACCTTATCCTCTGAGG...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTCCCAAAGTTCCTGTTaGGCCTATGAAACCTTGAAC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSSQSSC*AYETLN
Trigger: GTTCAAGGTTTCATAGGCGCAACAGGAACTTTGGGA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATCAGATATAAAACCATaGAGAGTACATGTTCTGACA +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVSDIKP*RVHVLT
Trigger: TGTCAGAACATGTACTCTGCATGGTTTTATATCTGA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCAACACAGTCATATACTaGCTCGGAAACCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSNTVIY*LGNLWF
Trigger: GAACCACAGGTTTCCGAGGCAGTATATGACTGTGTT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACACTGTTAGCAAACTaGCTACAGAGTGGACACGTG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTLLAN*LQSGHV
Trigger: CACGTGTCCACTCTGTAGGCAGTTTGCTAACAGTGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGTGAGCCCGGGGTCTTaGTATAGTCTCTATATTTCT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSVSPGS*YSLYIS
Trigger: AGAAATATAGAGACTATAGCAAGACCCCGGGCTCAC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAACCTTTTGCCAGCTGTaGTTGCACCACCTGAACACA +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTTFCQL*LHHLNT
Trigger: TGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp AACTGGCCAATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTTGGTAAAAAGTTATAATATCAAATaGTGGAACTGGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: NWPIQTGGTDEWMFCLVKSYNIK*WNWPIQ
Trigger: CTGGATTGGCCAGTTCCAGCATTTGATATTATAACT...TTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSENTCS*TTVLRV
Trigger: CACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETENTCS*TTVLRV
Trigger: CACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTC...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTCAAAGTACCAGGGATTaGTTGATAGCACTATATATT +
Preference number: 4 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTQSTRD*LIALYI
Trigger: AATATATAGTGCTATCAAGCAATCCCTGGTACTTTG...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTCAAAGTACCAGGGATTaGTTGATAGCACTATATATT +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCQSTRD*LIALYI
Trigger: AATATATAGTGCTATCAAGCAATCCCTGGTACTTTG...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATGTCAATTAGCATTTTaGTCTTCAACCACACTTACA +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVCQLAF*SSTTLT
Trigger: TGTAAGTGTGGTTGAAGAGCAAAATGCTAATTGACA...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGTCTCACAACATCCATTaGAGTTTCCATAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWSHNIH*SFHKAF
Trigger: AAAAGCTTTATGGAAACTGCAATGGATGTTGTGAGA...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCCTGCTCTGGGTACGTTaGTTAATTGATTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFLLWVR*LIDSSE
Trigger: TTCTGAGGAATCAATTAAGCAACGTACCCAGAGCAG...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATGGTCCATCAGCTGCTaGTTCATTATAGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSWSISC*FIIAFS
Trigger: AGAGAAGGCTATAATGAACCAGCAGCTGATGGACCA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCACAATGCAGGTAAAGTaGTCTTTGCGTAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFTMQVK*SLRKGC
Trigger: ACAACCCTTACGCAAAGACCACTTTACCTGCATTGT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATGTTTGGTAAAACGTTaGCAGAAGTCCCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLCLVKR*QKSQAA
Trigger: AGCTGCCTGGGACTTCTGCCAACGTTTTACCAAACA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTATAATATCAAATGCTaGAACTGGCCAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVYNIKC*NWPIQT
Trigger: TGTCTGGATTGGCCAGTTCCAGCATTTGATATTATA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp AAATACCTGTTCCTGCACCACAGTTCTGAGAGTGCAGTACACATTCACAGTAACTATAATATCAAATGCTaGAACTGGCCAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: KYLFLHHSSESAVHIHSNYNIKC*NWPIQT
Trigger: TGTCTGGATTGGCCAGTTCCAGCATTTGATATTATA...GTTACTGTGAATGTGTACTGCACTCTCAGAACTGTGGTGCAGGAACAGGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGGTAGTACTGAAAAATaGTGTTATAATTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVGSTEK*CYNSQA
Trigger: TGCCTGAGAATTATAACACCATTTTTCAGTACTACC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGATGCAATGCTGAGGTaGAGAGTCACAGCCCATTGT +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTDAMLR*RVTAHC
Trigger: ACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 4 (lower is better)
Translates to: TLFGNKRWACTESTSAQCNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACTGATCATCCTCATCTaGAGAATCCACTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLLIILI*RIHLSQ
Trigger: TTGGGACAAGTGGATTCTTCAGATGAGGATGATCAG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACAATGAGGTCCAGCAATaGACTGTGTGTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNNEVQQ*TVCPVI
Trigger: AATGACAGGACACACAGTTCATTGCTGGACCTCATT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGCTAGTACTTGCAGGTaGGTCTCTCTTTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTASTCR*VSLYFR
Trigger: CCTGAAGTAAAGAGAGACTCACCTGCAAGTACTAGC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAAGCTTTTCTGTCGTaGAGCAAACTCCGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKAFLS*SKLRKQ
Trigger: TTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATA +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTKIIVW*ARGLAI
Trigger: TATAGCAAGACCCCGGGCTCACCAGACAATGATTTT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCTCTTCTAACTGGGTaGGCTTTCTCCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSLLTG*AFSRDY
Trigger: ATAATCCCTGGAGAAAGCTCACCCAGTTAGAAGAGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAGAACAGACCGCATTaGTCCTCCCATTTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKNRPH*SSHFSQ
Trigger: CTGACTAAAATGGGAGGAGCAATGCGGTCTGTTCTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAAGTATATCTGTCCATTaGAGACTGCACATCTCTACG +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSSISVH*RLHIST
Trigger: CGTAGAGATGTGCAGTCTGCAATGGACAGATATACT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCAGTATATCTGTCCATTaGAGACTGCACATCTCTACG +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSSISVH*RLHIST
Trigger: CGTAGAGATGTGCAGTCTGCAATGGACAGATATACT...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR GCA 90 bp AATCATTGTCTGGTGAGCCCGGGGTCTTGCTATAGTCTCTATATTTCTTCTGAGTCAGATATAAAACCATaGAGAGTACATGTTCTGACA +
Preference number: 4 (lower is better)
Translates to: NHCLVSPGSCYSLYISSESDIKP*RVHVLT
Trigger: TGTCAGAACATGTACTCTGCATGGTTTTATATCTGA...CTCAGAAGAAATATAGAGACTATAGCAAGACCCCGGGCTCACCAGACAATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACAACACAGTCATATACTaGCTCGGAAACCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNNTVIY*LGNLWF
Trigger: GAACCACAGGTTTCCGAGGCAGTATATGACTGTGTT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTGTTGCTAGGACGTTaGCAAGGGTTATTTTCCACA +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSLLLGR*QGLFST
Trigger: TGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGTGAGCCCGGGGTCTTaGTATAGTCTCTATATTTCT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNVSPGS*YSLYIS
Trigger: AGAAATATAGAGACTATAGCAAGACCCCGGGCTCAC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGTGAGCCCGGGGTCTTaGTATAGTCTCTATATTTCT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLVSPGS*YSLYIS
Trigger: AGAAATATAGAGACTATAGCAAGACCCCGGGCTCAC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACACACCTGAACACAAATTaGCTCCTCGATGAATCAATT +
Preference number: 4 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTHLNTN*LLDESI
Trigger: AATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTAAACAAGACCTTTTaGCAGCTGTGCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLLNKTF*QLCLHH
Trigger: GTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGAAAATACCTGTTCCTaGACCACAGTTCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLENTCS*TTVLRV
Trigger: CACTCTCAGAACTGTGGTGCAGGAACAGGTATTTTC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCAAAATGATGATACGATaGAATGCTGAGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFKMMIR*NAEVES
Trigger: ACTCTCCACCTCAGCATTGCATCGTATCATCATTTT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCCAAAGTACCAGGGATTaGTTGATAGCACTATATATT +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVQSTRD*LIALYI
Trigger: AATATATAGTGCTATCAAGCAATCCCTGGTACTTTG...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCTCTAGTTTAGCAGCATaGATGTATGTATTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVSSLAA*MYVFKY
Trigger: GTACTTGAATACATACATGCATGCTGCTAAACTAGA...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACAATGCAGGTAAAGTaGTCTTTGCGTAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTMQVK*SLRKGC
Trigger: ACAACCCTTACGCAAAGACCACTTTACCTGCATTGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACAGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTGGTDE*MFCLVK
Trigger: TTTTACCAAACAGAACATCCATTCATCAGTGCCTCC...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAGAATGCAGAAGCGTaGCTCATTCATGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKNAEA*LIHEGH
Trigger: ATGACCCTCATGAATGAGCCACGCTTCTGCATTCTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GATTTAAACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 4 (lower is better)
Translates to: DLNKTFCQLCLHHLNTNCNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...GCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
3UTR CAA 72 bp CTTTATGAGATCTTGTATGCTTTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCACATTGCTTCCAGGATA +
Preference number: 4 (lower is better)
Translates to: LYEILYAFVART*PRVIFHIASRI
Trigger: TATCCTGGAAGCAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGATCTCATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGCAACCTTATACTCTTaGTCTGGAAGCATGTTGAGT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNATLYS*SGSMLS
Trigger: ACTCAACATGCTTCCAGATCAAGAGTATAAGGTTGC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCATAATATCCAGCAGCTaGCATTCTTCTGTTACCTGT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSIISSS*HSSVTC
Trigger: ACAGGTAACAGAAGAATGTCAGCTGCTGGATATTAT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGCATCAAACCAGTCTTaGAGAGCTTCAAGGCAATAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLASNQS*RASRQY
Trigger: ATATTGCCTTGAAGCTCTTCAAGACTGGTTTGATGC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATCTCTTCTAACTGGGTaGGCTTTCTCCAGGGATTAT +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTSLLTG*AFSRDY
Trigger: ATAATCCCTGGAGAAAGCTCACCCAGTTAGAAGAGA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACCATTGCACATTCCTaGGTTCCTTCTTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTIAHS*VPSSWY
Trigger: ATACCATGAAGAAGGAACTCAGGAATGTGCAATGGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACACACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 4 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTACCCTTTTTCTCTTaGCCAGACCTTGACTACCAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLLPFFS*PDLDYH
Trigger: ATGGTAGTCAAGGTCTGGGCAAGAGAAAAAGGGTAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAGATCTTTGGTGCCACTaGTTAGTTTTACCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSDLWCH*LVLPFF
Trigger: GAAAAAGGGTAAAACTAAGCAGTGGCACCAAAGATC...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATGGATTGATCTTTGGTaGCACTGCTTAGTTTTACCC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLWIDLW*HCLVLP
Trigger: GGGTAAAACTAAGCAGTGGCACCAAAGATCAATCCA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTTCTTACCCACATATTaGTGTGGATTTCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSFLPTY*CGFLQD
Trigger: GTCTTGCAGAAATCCACAGCAATATGTGGGTAAGAA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAACATCGACCTCTCATaGTCTGCATCAAGTACTGTA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLNIDLS*SASSTV
Trigger: TACAGTACTTGATGCAGAGCATGAGAGGTCGATGTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTGACACTAAGTTACTaGCAGGAAACCAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSLTLSY*QETNCH
Trigger: ATGACAGTTGGTTTCCTGGCAGTAACTTAGTGTCAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAACGAACCACCTGATTTaGTTCACTGCTACTGCGATT +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTTNHLI*FTATAI
Trigger: AATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTGTTGCTAGGACGTTaGCAAGGGTTATTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLLLLGR*QGLFST
Trigger: TGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR GCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACACCTGAACACAAATTaGCTCCTCGATGAATCAATT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSHLNTN*LLDESI
Trigger: AATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCAATAGGGTTAACCATTaGACATTCCTGAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFNRVNH*TFLSSF
Trigger: GAAGGAACTCAGGAATGTGCAATGGTTAACCCTATT...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR GCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCAAAATGATGATACGATaGAATGCTGAGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSKMMIR*NAEVES
Trigger: ACTCTCCACCTCAGCATTGCATCGTATCATCATTTT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ATCTTGTATGCTTTTGTTGCTAGGACGTTGCCAAGGGTTATTTTCCACATTGCTATTTACTTGAAGTTTTaGGACGAACCACCTGATTTG +
Preference number: 4 (lower is better)
Translates to: ILYAFVARTLPRVIFHIAIYLKF*DEPPDL
Trigger: CAAATCAGGTGGTTCGTCCCAAAACTTCAAGTAAAT...AGCAATGTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAACTGCCTACAGAGTaGACACGTGAATTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKLPTE*TREFSF
Trigger: AAAGGAGAATTCACGTGTCCACTCTGTAGGCAGTTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR CCA 90 bp ACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTTATCATGATAAAGAATTaGAACCTCAGGCTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TQSQCYKAACARLIHETVIMIKN*NLRLLF
Trigger: GAACAACAGCCTGAGGTTCCAATTCTTTATCATGAT...AACTGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACAATGCAGGTAAAGTaGTCTTTGCGTAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTMQVK*SLRKGC
Trigger: ACAACCCTTACGCAAAGACCACTTTACCTGCATTGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCAATTCTTCTTCTTCCTaGCAGCTAGGTAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSNSSSS*QLGKSS
Trigger: GGAAGATTTACCTAGCTGCCAGGAAGAAGAAGAATT...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCAATTCTTCTTCTTCCTaGCAGCTAGGTAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSNSSSS*QLGKSS
Trigger: GGAAGATTTACCTAGCTGCCAGGAAGAAGAAGAATT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSGGTDE*MFCLVK
Trigger: TTTTACCAAACAGAACATCCATTCATCAGTGCCTCC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTCCATTTTGACTCTTaGATAAGCAAGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSFHFDS*ISKAFP
Trigger: AGGAAAGGCCTTGCTTATCCAAGAGTCAAAATGGAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCAGCCCATTGTAATGTaGACCCCATCTTTTATTGAT +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSQPIVM*TPSFID
Trigger: ATCAATAAAAGATGGGGTCCACATTACAATGGGCTG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACAGCCCATTGTAATGTaGACCCCATCTTTTATTGAT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSQPIVM*TPSFID
Trigger: ATCAATAAAAGATGGGGTCCACATTACAATGGGCTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACAGTAACTTTGTTGCTTGCAGCAAAGTCCTTTCAGGCATACAAAAGTACCACATTTATGGTTCATTTCTaGGGAAGTCTGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: TVTLLLAAKSFQAYKSTTFMVHF*GSLSIS
Trigger: AGAAATGCTCAGACTTCCCCAGAAATGAACCATAAA...TGTGGTACTTTTGTATGCCTGAAAGGACTTTGCTGCAAGCAACAAAGTTACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCTTATATAACAAGCCATaGAAGTCCAAAGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFLYNKP*KSKVPG
Trigger: CCCTGGTACTTTGGACTTCCATGGCTTGTTATATAA...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATTTCGGGTATACTCTTaGGTTTCCCTAACTTTACAA +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSFRVYS*VSLTLQ
Trigger: TTGTAAAGTTAGGGAAACTCAAGAGTATACCCGAAA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAAGTACTGTATTTTaGTGTTGTGATGCCATTGTC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSSSTVF*CCDAIV
Trigger: GACAATGGCATCACAACATCAAAATACAGTACTTGA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACCCTCCACTTCCTTTATaGGATCTTGTATGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNPPLPL*DLVCFC
Trigger: ACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGG...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACCTCCACTTCCTTTATaGGATCTTGTATGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLPPLPL*DLVCFC
Trigger: ACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGTATCAATGAATAGCTaGTACGCATTGTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNVSMNS*YALLGE
Trigger: TTCTCCCAACAATGCGTATCAGCTATTCATTGATAC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAATTTCTGGGGAAGTCTaGGCATTTCTAATACAATCA +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETISGEV*AFLIQS
Trigger: TGATTGTATTAGAAATGCTCAGACTTCCCCAGAAAT...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACTGAACCTCTTGAGCTaGAAGGAAGTTCCAAAATTT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLLNLLS*KEVPKF
Trigger: AAATTTTGGAACTTCCTTTCAGCTCAAGAGGTTCAG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGTCGAACAGAATCATTaGCTCTTACAGAAAGTTATC +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSVEQNH*LLQKVI
Trigger: GATAACTTTCTGTAAGAGTCAATGATTCTGTTCGAC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACACCTGAACACAAATTaGCTCCTCGATGAATCAATT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLHLNTN*LLDESI
Trigger: AATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATATACTCAGAGTCAATaGTATAAAGCCGCATGTGCA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLYTQSQ*YKAACA
Trigger: TGCACATGCGGCTTTATAGCATTGACTCTGAGTATA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAATAGGGTTAACCATTaGACATTCCTGAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLNRVNH*TFLSSF
Trigger: GAAGGAACTCAGGAATGTGCAATGGTTAACCCTATT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAAATGATGATACGATaGAATGCTGAGGTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKMMIR*NAEVES
Trigger: ACTCTCCACCTCAGCATTGCATCGTATCATCATTTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCCAAAGTACCAGGGATTaGTTGATAGCACTATATATT +
Preference number: 4 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFQSTRD*LIALYI
Trigger: AATATATAGTGCTATCAAGCAATCCCTGGTACTTTG...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACATTCGTAAGACTTTTCTaGATCACATGTACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETFVRLF*ITCTLC
Trigger: GCAAAGAGTACATGTGATGCAGAAAAGTCTTACGAA...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGCTTCCAGGATAACATaGAAGAACACTGTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNASRIT*KNTVSK
Trigger: TTTGCTAACAGTGTTCTTCCATGTTATCCTGGAAGC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGCTTCCAGGATAACATaGAAGAACACTGTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLASRIT*KNTVSK
Trigger: TTTGCTAACAGTGTTCTTCCATGTTATCCTGGAAGC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR CCA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAATCATGATAAAGAATTaGAACCTCAGGCTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: YTQSQCYKAACARLIHETIMIKN*NLRLLF
Trigger: GAACAACAGCCTGAGGTTCCAATTCTTTATCATGAT...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGTAAGCATTTTTCCATaGATTCAGGAGACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLVSIFP*IQETKQ
Trigger: TTGCTTGGTCTCCTGAATCCATGGAAAAATGCTTAC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAATTCTTCTTCTTCCTaGCAGCTAGGTAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLNSSSS*QLGKSS
Trigger: GGAAGATTTACCTAGCTGCCAGGAAGAAGAAGAATT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGGAGGCACTGATGAATaGATGTTCTGTTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLGGTDE*MFCLVK
Trigger: TTTTACCAAACAGAACATCCATTCATCAGTGCCTCC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTATAATATCAAATGCTaGAACTGGCCAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSYNIKC*NWPIQT
Trigger: TGTCTGGATTGGCCAGTTCCAGCATTTGATATTATA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTTCCATTTTGACTCTTaGATAAGCAAGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNFHFDS*ISKAFP
Trigger: AGGAAAGGCCTTGCTTATCCAAGAGTCAAAATGGAA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTCCATTTTGACTCTTaGATAAGCAAGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLFHFDS*ISKAFP
Trigger: AGGAAAGGCCTTGCTTATCCAAGAGTCAAAATGGAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACCAGCCCATTGTAATGTaGACCCCATCTTTTATTGAT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNQPIVM*TPSFID
Trigger: ATCAATAAAAGATGGGGTCCACATTACAATGGGCTG...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACAGCCCATTGTAATGTaGACCCCATCTTTTATTGAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLQPIVM*TPSFID
Trigger: ATCAATAAAAGATGGGGTCCACATTACAATGGGCTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTTTGGTAATAAAAGGTaGGCATGCACGGAATCAACA +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNFGNKR*ACTEST
Trigger: TGTTGATTCCGTGCATGCCCACCTTTTATTACCAAA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATTCCTTCTCATAGAGTaGGTTTTAGCTCAATCATTC +
Preference number: 4 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSFLLIE*VLAQSF
Trigger: GAATGATTGAGCTAAAACCCACTCTATGAGAAGGAA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTCCTTCTCATAGAGTaGGTTTTAGCTCAATCATTC +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSFLLIE*VLAQSF
Trigger: GAATGATTGAGCTAAAACCCACTCTATGAGAAGGAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTTATATAACAAGCCATaGAAGTCCAAAGTACCAGGG +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNLYNKP*KSKVPG
Trigger: CCCTGGTACTTTGGACTTCCATGGCTTGTTATATAA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTCATTGGAGGTTAGATaGTATCTAGCAACAGAGTAC +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNSLEVR*YLATEY
Trigger: GTACTCTGTTGCTAGATACCATCTAACCTCCAATGA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR TCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACACTCTAAGTATCAATaGATAGCTGATACGCATTGT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLHSKYQ*IADTHC
Trigger: ACAATGCGTATCAGCTATTCATTGATACTTAGAGTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAATTTGTTTCTGAACTaGTGCTTACTGGGAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTNLFLN*CLLGKL
Trigger: GAGCTTTCCCAGTAAGCATCAGTTCAGAAACAAATT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACATTGCTGTGGATTTCTaGAAGACTTGCTTGAATTTG +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNIAVDF*KTCLNL
Trigger: CAAATTCAAGCAAGTCTTGCAGAAATCCACAGCAAT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR GCA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCTCAGATATAAAACCATaGAGAGTACATGTTCTGACA +
Preference number: 4 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSSDIKP*RVHVLT
Trigger: TGTCAGAACATGTACTCTGCATGGTTTTATATCTGA...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAGTTATAATATCAAATaGTGGAACTGGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSYNIK*WNWPIQ
Trigger: CTGGATTGGCCAGTTCCAGCATTTGATATTATAACT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACACACGGAATCAACATCTaGCCAGTGTATGTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTHGINI*PVYVLK
Trigger: TTTAAGAACATACACTGGGCAGATGTTGATTCCGTG...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTATGGATTGATCTTTaGTGCCACTGCTTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSLWIDL*CHCLVL
Trigger: TAAAACTAAGCAGTGGCACCAAAGATCAATCCATAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATTCAGGAGCAGTCTCTaGAACTCTTACTCTAACATA +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTFRSSL*NSYSNI
Trigger: TATGTTAGAGTAAGAGTTCCAGAGACTGCTCCTGAA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACATTTACTTGAAGTTTTaGGACGAACCACCTGATTTG +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNIYLKF*DEPPDL
Trigger: CAAATCAGGTGGTTCGTCCCAAAACTTCAAGTAAAT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGCTTCCAGGATAACATaGAAGAACACTGTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTASRIT*KNTVSK
Trigger: TTTGCTAACAGTGTTCTTCCATGTTATCCTGGAAGC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAATCATGATAAAGAATTaGAACCTCAGGCTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLIMIKN*NLRLLF
Trigger: GAACAACAGCCTGAGGTTCCAATTCTTTATCATGAT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATATAATATCAAATGCTaGAACTGGCCAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLYNIKC*NWPIQT
Trigger: TGTCTGGATTGGCCAGTTCCAGCATTTGATATTATA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACACAGCCCATTGTAATGTaGACCCCATCTTTTATTGAT +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTQPIVM*TPSFID
Trigger: ATCAATAAAAGATGGGGTCCACATTACAATGGGCTG...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR TCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATACTGCCAAGAGACATaGACTATCCTTAAAATAACG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTYCQET*TILKIT
Trigger: CGTTATTTTAAGGATAGTTCATGTCTCTTGGCAGTA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAGTTATAATATCAAATaGTGGAACTGGCCAATCCAG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTSYNIK*WNWPIQ
Trigger: CTGGATTGGCCAGTTCCAGCATTTGATATTATAACT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATGTCAATTAGCATTTTaGTCTTCAACCACACTTACA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLCQLAF*SSTTLT
Trigger: TGTAAGTGTGGTTGAAGAGCAAAATGCTAATTGACA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACACACTTCACATCCATATaGACAACCATAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTHFTSI*TTIKHS
Trigger: GGAATGTTTTATGGTTGTGCATATGGATGTGAAGTG...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCTAGTTTAGCAGCATaGATGTATGTATTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSSLAA*MYVFKY
Trigger: GTACTTGAATACATACATGCATGCTGCTAAACTAGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATCAAAACATCCATTATaGATTGATCTTTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTSKHPL*IDLWCH
Trigger: GTGGCACCAAAGATCAATCCATAATGGATGTTTTGA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAATTTACTTGAAGTTTTaGGACGAACCACCTGATTTG +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTIYLKF*DEPPDL
Trigger: CAAATCAGGTGGTTCGTCCCAAAACTTCAAGTAAAT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACGGTAGTACTGAAAAATaGTGTTATAATTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNGSTEK*CYNSQA
Trigger: TGCCTGAGAATTATAACACCATTTTTCAGTACTACC...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGGTAGTACTGAAAAATaGTGTTATAATTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLGSTEK*CYNSQA
Trigger: TGCCTGAGAATTATAACACCATTTTTCAGTACTACC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATTCCTTCTCATAGAGTaGGTTTTAGCTCAATCATTC +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTFLLIE*VLAQSF
Trigger: GAATGATTGAGCTAAAACCCACTCTATGAGAAGGAA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 4 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACAACCACACTTACAAATaGTCTGGTATTCATAACGAT +
Preference number: 4 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNNHTYK*SGIHND
Trigger: ATCGTTATGAATACCAGACCATTTGTAAGTGTGGTT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR GCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATGTCAATTAGCATTTTaGTCTTCAACCACACTTACA +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTCQLAF*SSTTLT
Trigger: TGTAAGTGTGGTTGAAGAGCAAAATGCTAATTGACA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CCA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATGTCAGGATCAATCATaGAATTACAGAAATGAGACT +
Preference number: 4 (lower is better)
Translates to: TTLTNGLVFITINAKSMTCQDQS*NYRNET
Trigger: AGTCTCATTTCTGTAATTCCATGATTGATCCTGACA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp TCAGCACCTGCGCGGTTGTCCGGCCGGCTGAGGGCCGCCTTGAGGTaGGCGGCGGTGGCCGCCTTGTCTAGGGCCAGCCCCGGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: SAPARLSGRLRAALR*AAVAALSRASPGAG
Trigger: GCCCGCGCCGGGGCTGGCCCTAGACAAGGCGGCCACCGCCGCGCACCTCAAGGCGGCCCTCAGCCGGCCGGACAACCGCGCAGGTGCTGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp GCGGCCAGCGGCCGCTCGGCGCTCAGCACCCGCTCCAGCAGCGCCTaGAGCTCCTCAGCACCTGCGCGGTTGTCCGGCCGGCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AASGRSALSTRSSSA*SSSAPARLSGRLRA
Trigger: GGCCCTCAGCCGGCCGGACAACCGCGCAGGTGCTGAGGAGCTGCAGGCGCTGCTGGAGCGGGTGCTGAGCGCCGAGCGGCCGCTGGCCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 90 bp TGCAGGGCGAGATGCCGCACGTCCGGCAGCGGTAGGCCACGAAGTTaGCTGTCCAGACCAGGCCGCAGAGCGCCGCGGGATCGTAGGCCC +
Preference number: 5 (lower is better)
Translates to: CRARCRTSGSGRPRS*LSRPGRRAPRDRRP
Trigger: GGGCCTACGATCCCGCGGCGCTCTGCGGCCTGGTCTGGACAGCCAACTTCGTGGCCTACCGCTGCCGGACGTGCGGCATCTCGCCCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp GTCCGGTGTGGTCGCCCTGGTGGAAGCACTCGGCGCACAGCGACATaGAGGGCGAGATGCCGCACGTCCGGCAGCGGTAGGCCACGAAGT +
Preference number: 5 (lower is better)
Translates to: VRCGRPGGSTRRTAT*RARCRTSGSGRPRS
Trigger: ACTTCGTGGCCTACCGCTGCCGGACGTGCGGCATCTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 90 bp GCGCCCCCGGCCTGGCTGCGGAACATGTTGAAGTCGTGTCCGGTGTaGTCGCCCTGGTGGAAGCACTCGGCGCACAGCGACATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: APPAWLRNMLKSCPV*SPWWKHSAHSDMQG
Trigger: GCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGACACGACTTCAACATGTTCCGCAGCCAGGCCGGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 90 bp TCCCGCATCACGTTGCTGTCCCCGCAGTCGCAGGCGCCCCCGGCCTaGCTGCGGAACATGTTGAAGTCGTGTCCGGTGTGGTCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SRITLLSPQSQAPPA*LRNMLKSCPVWSPW
Trigger: CCAGGGCGACCACACCGGACACGACTTCAACATGTTCCGCAGCCAGGCCGGGGGCGCCTGCGACTGCGGGGACAGCAACGTGATGCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp CGCCCTGGTGGAAGCACTCGGCGCACAGCGACATGCAGGGCGAGATaGCGCACGTCCGGCAGCGGTAGGCCACGAAGTTGGCTGTCCAGA +
Preference number: 5 (lower is better)
Translates to: RPGGSTRRTATCRAR*RTSGSGRPRSWLSR
Trigger: TCTGGACAGCCAACTTCGTGGCCTACCGCTGCCGGACGTGCGGCATCTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 90 bp GCCTGGCTGCGGAACATGTTGAAGTCGTGTCCGGTGTGGTCGCCCTaGTGGAAGCACTCGGCGCACAGCGACATGCAGGGCGAGATGCCG +
Preference number: 5 (lower is better)
Translates to: AWLRNMLKSCPVWSP*WKHSAHSDMQGEMP
Trigger: CGGCATCTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGACACGACTTCAACATGTTCCGCAGCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 90 bp TGGCTGCGGAACATGTTGAAGTCGTGTCCGGTGTGGTCGCCCTGGTaGAAGCACTCGGCGCACAGCGACATGCAGGGCGAGATGCCGCAC +
Preference number: 5 (lower is better)
Translates to: WLRNMLKSCPVWSPW*KHSAHSDMQGEMPH
Trigger: GTGCGGCATCTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGACACGACTTCAACATGTTCCGCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTCAGCACCTGCGCGGTaGTCCGGCCGGCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCSAPAR*SGRLRA
Trigger: GGCCCTCAGCCGGCCGGACAACCGCGCAGGTGCTGA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCCTCTCCCGCATCACGTaGCTGTCCCCGCAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVLSRIT*LSPQSQ
Trigger: CTGCGACTGCGGGGACAGCAACGTGATGCGGGAGAG...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp TTCAGAGGAGGGGCCACTCTGTCCACAAATAACACAGTCATATACTaGCTCGGAAACCTGTGGTTCTGCCGTGGTGATCTCCATAGGAAT +
Preference number: 5 (lower is better)
Translates to: FRGGATLSTNNTVIY*LGNLWFCRGDLHRN
Trigger: ATTCCTATGGAGATCACCACGGCAGAACCACAGGTTTCCGAGGCAGTATATGACTGTGTTATTTGTGGACAGAGTGGCCCCTCCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR CAA 90 bp CAAATACACGGAACCCCAGAGGCAGAAGCGGTGACCTCGAATGATGATAATTACCTGTTTGGTAAAACGTaGGCAGAAGTCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: QIHGTPEAEAVTSNDDNYLFGKT*AEVPGS
Trigger: GCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAG...GTAATTATCATCATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS CCA 90 bp ATGAGGTCCAGCAATGAACTGTGTGTCCTGTCATTCATACACAGCTaGGCTACCATCTCGGCCCTGAGAATCTCATCATCAGACATTCCT +
Preference number: 5 (lower is better)
Translates to: MRSSNELCVLSFIHS*ATISALRISSSDIP
Trigger: AGGAATGTCTGATGATGAGATTCTCAGGGCCGAGATGGTAGCCCAGCTGTGTATGAATGACAGGACACACAGTTCATTGCTGGACCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATGAGAGCTCAGAATTaGGAGAGTCCAGGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVMRAQN*ESPGPA
Trigger: CGCTGGCCCTGGACTCTCCAAATTCTGAGCTCTCAT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAATAAAAGCCCCCACATaGGCTGTGCACAGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVIKAPT*AVHRPQ
Trigger: TTGAGGCCTGTGCACAGCCAATGTGGGGGCTTTTAT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTACTGTTTGGTAAAACGTaGGCAGAAGTCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVLFGKT*AEVPGS
Trigger: GCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAG...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTCTCTTGCCCAGACCTaGACTACCATCCTGATCATC +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCSLAQT*TTILII
Trigger: GATGATCAGGATGGTAGTCAAGGTCTGGGCAAGAGA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGACGGGGTCAAACTCTaGATCCCAGACTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVDGVKL*IPDFSF
Trigger: AAAGCTGAAGTCTGGGATCAAGAGTTTGACCCCGTC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGACGAACCACCTGATTaGCTTCACTGCTACTGCGAT +
Preference number: 5 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVDEPPD*LHCYCD
Trigger: ATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGTC...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTGACGAACCACCTGATTaGCTTCACTGCTACTGCGAT +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTDEPPD*LHCYCD
Trigger: ATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGTC...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTAAGCAAGGCCTTTCCTaGTTCTGCATGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFKQGLS*FCMSFS
Trigger: ACTGAAAGACATGCAGAACAAGGAAAGGCCTTGCTT...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS TCA 90 bp TGTCGCATGTTTGACACTAAGTTACTGCCAGGAAACCAACTGTCATaGCAACGTTCTGGTCCACCCACTGATGCCTCTTCATCTGATTCT +
Preference number: 5 (lower is better)
Translates to: CRMFDTKLLPGNQLS*QRSGPPTDASSSDS
Trigger: AGAATCAGATGAAGAGGCATCAGTGGGTGGACCAGAACGTTGTCATGACAGTTGGTTTCCTGGCAGTAACTTAGTGTCAAACATGCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS TCA 90 bp TTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCCTCCTCGATaGATCAATTCAAGTTCTAAATTGGTTCAGCAAGGAAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LPAVLAPPEHKLPPR*INSSSKLVQQGSRD
Trigger: GTCCCTGCTTCCTTGCTGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR CAA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGGGAGTATACATGCCTaGTTGCATAGAACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVGSIHA*LHRTSR
Trigger: CCTGGAGGTTCTATGCAACAAGGCATGTATACTCCC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTCCCAGACTTCAGCTTaGGGAGTATACATGCCTTGT +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTSQTSA*GVYMPC
Trigger: ACAAGGCATGTATACTCCCAAAGCTGAAGTCTGGGA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTCACATGTACTCTTTTaGAGAGCTCCCGCGTGTTTC +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTSHVLF*RAPACF
Trigger: GAAACACGCGGGAGCTCTCAAAAAGAGTACATGTGA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS GCA 90 bp TCCATAAAGCTTTTCTGTCGTGAAGCAAACTCCGCAAGCAATTTCTaGTGCCTCTCTCTAGCCTTCTGTCGCCTTTCTTCTTTGTCCAAT +
Preference number: 5 (lower is better)
Translates to: SIKLFCREANSASNF*CLSLAFCRLSSLSN
Trigger: ATTGGACAAAGAAGAAAGGCGACAGAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000487689.1
CDS CCA 90 bp ACTCTGTCCACAAATAACACAGTCATATACTGCCTCGGAAACCTGTaGTTCTGCCGTGGTGATCTCCATAGGAATATCATTCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TLSTNNTVIYCLGNL*FCRGDLHRNIILRR
Trigger: TCTCCTGAGAATGATATTCCTATGGAGATCACCACGGCAGAACCACAGGTTTCCGAGGCAGTATATGACTGTGTTATTTGTGGACAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTGGCTGCGGAACATGTaGAAGTCGTGTCCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNWLRNM*KSCPVW
Trigger: CCACACCGGACACGACTTCAACATGTTCCGCAGCCA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGTATACATGCCTTGTaGCATAGAACCTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCSIHAL*HRTSRF
Trigger: GAACCTGGAGGTTCTATGCAACAAGGCATGTATACT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGAGCAGACCATTTACTaGAAGTTTTGGGACGAACCA +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCEQTIY*KFWDEP
Trigger: TGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCTC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp CAAACAGCAGGATCTTTAGGAACCTTGGTGCAGACACTACAGGTTTTTCTGTGGGAGCAGACCATTTACTaGAAGTTTTGGGACGAACCA +
Preference number: 5 (lower is better)
Translates to: QTAGSLGTLVQTLQVFLWEQTIY*KFWDEP
Trigger: TGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCTC...CCACAGAAAAACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCCTGCTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTFVART*PRVIFH
Trigger: GTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCFVART*PRVIFH
Trigger: GTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCA +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTFKQDL*PAVLAP
Trigger: TGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAGCAAGGCCTTTCCTaGTTCTGCATGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCKQGLS*FCMSFS
Trigger: ACTGAAAGACATGCAGAACAAGGAAAGGCCTTGCTT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GATGCAATGCTGAGGTGGAGAGTCACAGCCCATTGTAATGTGGACCCCATCTTTTTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: DAMLRWRVTAHCNVDPIFFTVTL*LAAKSF
Trigger: AAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAA...AAAGATGGGGTCCACATTACAATGGGCTGTGACTCTCCACCTCAGCATTGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS TCA 90 bp AGGAGAATCAACATCCATTGCAGTTTCCATAAAGCTTTTCTGTCGTaGAGCAAACTCCGCAAGCAATTTCTGCTGCCTCTCTCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: RRINIHCSFHKAFLS*SKLRKQFLLPLSSL
Trigger: AAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTTATGGAAACTGCAATGGATGTTGATTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS TCA 90 bp TTGTCTCACAACATCCATTGCAGTTTCCATAAAGCTTTTCTGTCGTaGAGCAAACTCCGCAAGCAATTTCTGCTGCCTCTCTCTAGCCTT +
Preference number: 5 (lower is better)
Translates to: LSHNIHCSFHKAFLS*SKLRKQFLLPLSSL
Trigger: AAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTTATGGAAACTGCAATGGATGTTGTGAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS GCA 90 bp ATAAAGCTTTTCTGTCGTGAAGCAAACTCCGCAAGCAATTTCTGCTaGCTCTCTCTAGCCTTCTGTCGCCTTTCTTCTTTGTCCAATGTT +
Preference number: 5 (lower is better)
Translates to: IKLFCREANSASNFC*LSLAFCRLSSLSNV
Trigger: AACATTGGACAAAGAAGAAAGGCGACAGAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000487689.1
CDS-3UTR CAA 90 bp CCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAAACATCCATTATGGATaGATCTTTGGTGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PCLVIKGGHARNQHLPSVNIHYG*IFGATA
Trigger: AGCAGTGGCACCAAAGATCAATCCATAATGGATGTT...TACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTTTCTGCAAGACTTGCTaGAATTTGGAGTGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTFCKTC*NLEWVN
Trigger: ATTCACCCACTCCAAATTCAAGCAAGTCTTGCAGAA...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGTCATGGCTTGTCCTTaGATTTGCAGACCATTTCTT +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCVMACP*ICRPFL
Trigger: AAGAAATGGTCTGCAAATCAAAGGACAAGCCATGAC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGATGTTGTGATGCCATaGTCAACAAATCCACTACCT +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCDVVMP*STNPLP
Trigger: AGGTAGTGGATTTGTTGACAATGGCATCACAACATC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp AACTGGCCAATCCAGACAGGAGGCACTGATGAATGGATGTTCTGTTTGGTAAAATTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: NWPIQTGGTDEWMFCLVKFVART*PRVIFH
Trigger: GTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAA...TTTTACCAAACAGAACATCCATTCATCAGTGCCTCCTGTCTGGATTGGCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTAGATCTTGTATGCTTTaGTTGCTAGGACGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCRSCML*LLGRCQ
Trigger: TTGGCAACGTCCTAGCAACAAAAGCATACAAGATCT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACACTGTTTGGTAAAACGTaGGCAGAAGTCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: YTQSQCYKAACARLIHETLFGKT*AEVPGS
Trigger: GCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAG...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCEWMFC*VKRWQK
Trigger: CTTCTGCCAACGTTTTACCAAACAGAACATCCATTC...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp AATCATTGTCTGGTGAGCCCGGGGTCTTGCTATAGTCTCTATATTTCTTCTGAGAAGCAAGGCCTTTCCTaGTTCTGCATGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: NHCLVSPGSCYSLYISSEKQGLS*FCMSFS
Trigger: ACTGAAAGACATGCAGAACAAGGAAAGGCCTTGCTT...CTCAGAAGAAATATAGAGACTATAGCAAGACCCCGGGCTCACCAGACAATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp TTCTGCATCACATGTACTCTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGAGTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCA +
Preference number: 5 (lower is better)
Translates to: FCITCTLCVRVVASLRSGVKQDL*PAVLAP
Trigger: TGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAC...TCCAGATCTTAATGATGCCACAACCCTTACGCAAAGAGTACATGTGATGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS TCA 90 bp CTTTCCATCATGTATAATAGCACAGTGACCATAATATCCAGCAGCTaGCATTCTTCTGTTACCTGTCTGGCTAGCTCCTCATTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: LSIMYNSTVTIISSS*HSSVTCLASSSLLN
Trigger: GTTCAGCAATGAGGAGCTAGCCAGACAGGTAACAGAAGAATGTCAGCTGCTGGATATTATGGTCACTGTGCTATTATACATGATGGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp TGGATTGATCTTTGGTGCCACTGCTTAGTTTTACCCTTTTTCTCTTaGCCAGACCTTGACTACCATCCTGATCATCCTCATCTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: WIDLWCHCLVLPFFS*PDLDYHPDHPHLKN
Trigger: ATTCTTCAGATGAGGATGATCAGGATGGTAGTCAAGGTCTGGGCAAGAGAAAAAGGGTAAAACTAAGCAGTGGCACCAAAGATCAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 90 bp TCTTTACTTAAATTTGTTTCTGATGGGAAAGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTTATGAGATCTTGTATGCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLLKFVSDGKAPGRP*SSSTSFMRSCMLLL
Trigger: CAACAAAAGCATACAAGATCTCATAAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGCTTTCCCATCAGAAACAAATTTAAGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000439681.1
CDS GCA 90 bp AACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTaGCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: NKTFCQLCLHHLNTN*LLDESIQVLNWFSK
Trigger: CTTGCTGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCAGATGAAAAGTGACTaGGTTAGGTGCTGGCTCGTC +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSQMKSD*VRCWLV
Trigger: GACGAGCCAGCACCTAACCAAGTCACTTTTCATCTG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGACGGGGTCAAACTCTaGATCCCAGACTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSDGVKL*IPDFSF
Trigger: AAAGCTGAAGTCTGGGATCAAGAGTTTGACCCCGTC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR CAA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGACGAACCACCTGATTaGCTTCACTGCTACTGCGAT +
Preference number: 5 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSDEPPD*LHCYCD
Trigger: ATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGTC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCACAGGTAAAGTGGTCTTaGCGTAAGGGTTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSQVKWS*RKGCGI
Trigger: GATGCCACAACCCTTACGCAAAGACCACTTTACCTG...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACTGTTTGGTAAAACGTaGGCAGAAGTCCCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLLFGKT*AEVPGS
Trigger: GCTGCCTGGGACTTCTGCCAACGTTTTACCAAACAG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVEWMFC*VKRWQK
Trigger: CTTCTGCCAACGTTTTACCAAACAGAACATCCATTC...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp TTTTCACAGCAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: FSQQFLRRMQKRGSFMRVTFTVT*LLAAKS
Trigger: GGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGT...GACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTGCTGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GATTTAAACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: DLNKTFCQLCLHHLNTNCTFTVT*LLAAKS
Trigger: GGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGT...GCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS TCA 90 bp TTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCCTCCTCGATaGATCAATTCAAGTTCTAAATTGGTTCTAGCAACAGAGTACATA +
Preference number: 5 (lower is better)
Translates to: LPAVLAPPEHKLPPR*INSSSKLVLATEYI
Trigger: TATGTACTCTGTTGCTAGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
CDS GCA 90 bp AACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTaGCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: NKTFCQLCLHHLNTN*LLDESIQVLNWFCK
Trigger: CTTACAGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474426.1
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTCAGATCTTTGTAGTTTaGTTGGTTTGTCAAAACCTG +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCQIFVV*LVCQNL
Trigger: CAGGTTTTGACAAACCAACAAAACTACAAAGATCTG...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTTCAGTATATCTGTCCATaGCAGACTGCACATCTCTAC +
Preference number: 5 (lower is better)
Translates to: TQSQCYKAACARLIHETVQYICP*QTAHLY
Trigger: GTAGAGATGTGCAGTCTGCAATGGACAGATATACTG...AACTGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTCTTCAATGATGCGTTaGTTCATTCTACTTTGCGAT +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCSSMMR*FILLCD
Trigger: ATCGCAAAGTAGAATGAACAAACGCATCATTGAAGA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCTTGTATGCTTTTGTaGCTAGGACGTTGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSSCMLL*LGRCQG
Trigger: CCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTTTCCTTTATGAGATCTaGTATGCTTTTGTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCFLYEI*YAFVAR
Trigger: CCTAGCAACAAAAGCATACAAGATCTCATAAAGGAA...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATTTTGCCAGCTGTGCTaGCACCACCTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSFCQLC*HHLNTN
Trigger: ATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACCAGGTAAAGTGGTCTTaGCGTAAGGGTTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNQVKWS*RKGCGI
Trigger: GATGCCACAACCCTTACGCAAAGACCACTTTACCTG...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACAGGTAAAGTGGTCTTaGCGTAAGGGTTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLQVKWS*RKGCGI
Trigger: GATGCCACAACCCTTACGCAAAGACCACTTTACCTG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCACATGTACTCTTTTaGAGAGCTCCCGCGTGTTTC +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSSHVLF*RAPACF
Trigger: GAAACACGCGGGAGCTCTCAAAAAGAGTACATGTGA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAGGATCTTTAGGAACCTaGGTGCAGACACTACAGGTT +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSGSLGT*VQTLQV
Trigger: AACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCC...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGGATCTTTAGGAACCTaGGTGCAGACACTACAGGTT +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSGSLGT*VQTLQV
Trigger: AACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTATGAGAAATCCACTGTaGCTCAAGAACTTTGTATCT +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTMRNPL*LKNFVS
Trigger: AGATACAAAGTTCTTGAGCAACAGTGGATTTCTCAT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp ACCTTGTTTGGTAATAAAAGGTGGGCATGCACGGAATCAACATCTGCCCAGTGTATGAGAAATCCACTGTaGCTCAAGAACTTTGTATCT +
Preference number: 5 (lower is better)
Translates to: TLFGNKRWACTESTSAQCMRNPL*LKNFVS
Trigger: AGATACAAAGTTCTTGAGCAACAGTGGATTTCTCAT...ACACTGGGCAGATGTTGATTCCGTGCATGCCCACCTTTTATTACCAAACAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp CAGTTTCTAAGAAGAATGCAGAAGCGTGGCTCATTCATGAGGGTCATCACCACTACCAAGCACCTAATTTaGGAAAGGCTTCATAATGTA +
Preference number: 5 (lower is better)
Translates to: QFLRRMQKRGSFMRVITTTKHLI*ERLHNV
Trigger: TACATTATGAAGCCTTTCCAAAATTAGGTGCTTGGT...AGTGGTGATGACCCTCATGAATGAGCCACGCTTCTGCATTCTTCTTAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp CACCTGAACACAAATTGCCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCCATCACATGTACTCTTaGCGTAAGGGTTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: HLNTNCLLDESIQVLNWFHHMYS*RKGCGI
Trigger: GATGCCACAACCCTTACGCAAAGAGTACATGTGATG...GAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS TCA 90 bp TTAGGTGCTGGCTCGTCTACGAAGTTAATAGCATCAAACCAGTCTTaGAGAGCTTCAAGGCAATATCTAACAACATTTCGGGTATACTCT +
Preference number: 5 (lower is better)
Translates to: LGAGSSTKLIASNQS*RASRQYLTTFRVYS
Trigger: AGAGTATACCCGAAATGTTGTTAGATATTGCCTTGAAGCTCTTCAAGACTGGTTTGATGCTATTAACTTCGTAGACGAGCCAGCACCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 90 bp ATTGGTTCTAGCAACAGAGTACATAAAGAGAAAATCATTGTCTGGTaGGCCCGGGGTCTTGCTATAGTCTCTATATTTCTTCTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: IGSSNRVHKEKIIVW*ARGLAIVSIFLLSG
Trigger: ACCACTCAGAAGAAATATAGAGACTATAGCAAGACCCCGGGCTCACCAGACAATGATTTTCTCTTTATGTACTCTGTTGCTAGAACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACTGCGCCTATGAAACCTaGAACAGCCAGAGAACTAGT +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNCAYET*NSQRTS
Trigger: ACTAGTTCTCTGGCTGTTCAAGGTTTCATAGGCGCA...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAGGCTTGTCCTTTGATTaGCAGACCATTTCTTACCCA +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSGLSFD*QTISYP
Trigger: TGGGTAAGAAATGGTCTGCAAATCAAAGGACAAGCC...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCAGTATATCTGTCCATaGCAGACTGCACATCTCTAC +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSQYICP*QTAHLY
Trigger: GTAGAGATGTGCAGTCTGCAATGGACAGATATACTG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGAGCAGACCATTTACTaGAAGTTTTGGGACGAACCA +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSEQTIY*KFWDEP
Trigger: TGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCTC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTGTGTGACCACAGGTTaGTACATAAACACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSCVTTG*YINTSF
Trigger: GAAGGAGGTGTTTATGTACAAACCTGTGGTCACACA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCTTGTATGCTTTTGTaGCTAGGACGTTGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSCMLL*LGRCQG
Trigger: CCCTTGGCAACGTCCTAGCAACAAAAGCATACAAGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTTTGCCAGCTGTGCTaGCACCACCTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLFCQLC*HHLNTN
Trigger: ATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCA +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSFKQDL*PAVLAP
Trigger: TGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCACATGTACTCTTTTaGAGAGCTCCCGCGTGTTTC +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSHVLF*RAPACF
Trigger: GAAACACGCGGGAGCTCTCAAAAAGAGTACATGTGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGGATCTTTAGGAACCTaGGTGCAGACACTACAGGTT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLGSLGT*VQTLQV
Trigger: AACCTGTAGTGTCTGCACCAAGGTTCCTAAAGATCC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp ACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACAGTTACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: TQSQCYKAACARLIHETVTFTVT*LLAAKS
Trigger: GGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGT...AACTGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp GATTTAAACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCACCAAGCACCTAATTTaGGAAAGGCTTCATAATGTA +
Preference number: 5 (lower is better)
Translates to: DLNKTFCQLCLHHLNTNCTKHLI*ERLHNV
Trigger: TACATTATGAAGCCTTTCCAAAATTAGGTGCTTGGT...GCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR CAA 90 bp TTCTGCATCACATGTACTCTTTGCGTAAGGGTTGTGGCATCATTAAGATCTGGACCAAAGTACCAGGGATaGCTTGATAGCACTATATAT +
Preference number: 5 (lower is better)
Translates to: FCITCTLCVRVVASLRSGPKYQG*LDSTIY
Trigger: ATATATAGTGCTATCAAGCAATCCCTGGTACTTTGG...TCCAGATCTTAATGATGCCACAACCCTTACGCAAAGAGTACATGTGATGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS TCA 90 bp CATTCTTCTGTTACCTGTCTGGCTAGCTCCTCATTGCTGAACAACTaGACACTAATATGCACAATTCTGTTAGACATTGTGTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: HSSVTCLASSSLLNN*TLICTILLDIVSDS
Trigger: TGAATCAGACACAATGTCTAACAGAATTGTGCATATTAGTGTTCAGTTGTTCAGCAATGAGGAGCTAGCCAGACAGGTAACAGAAGAATG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 90 bp TTGCCAGCTGTGCTTGCACCACCTGAACACAAATTGCCTCCTCGATaGATCAATTCAAGTTCTAAATTGGTTCTTTATTTTCTACAACCA +
Preference number: 5 (lower is better)
Translates to: LPAVLAPPEHKLPPR*INSSSKLVLYFLQP
Trigger: TGGTTGTAGAAAATAAAGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465630.1
CDS GCA 90 bp AACAAGACCTTTTGCCAGCTGTGCTTGCACCACCTGAACACAAATTaGCTCCTCGATGAATCAATTCAAGTTCTAAATTGGTTCTTTATT +
Preference number: 5 (lower is better)
Translates to: NKTFCQLCLHHLNTN*LLDESIQVLNWFFI
Trigger: AATAAAGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465630.1
CDS-3UTR CAA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGACATACGTCATGGCTaGTCCTTTGATTTGCAGACC +
Preference number: 5 (lower is better)
Translates to: TTLTNGLVFITINAKSMTDIRHG*SFDLQT
Trigger: GGTCTGCAAATCAAAGGACAAGCCATGACGTATGTC...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATGTGTGACCACAGGTTaGTACATAAACACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLCVTTG*YINTSF
Trigger: GAAGGAGGTGTTTATGTACAAACCTGTGGTCACACA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTTGTTGCTAGGACGTaGCCAAGGGTTATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLFVART*PRVIFH
Trigger: GTGGAAAATAACCCTTGGCAACGTCCTAGCAACAAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAAGATCTTGTATGCTTTaGTTGCTAGGACGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSRSCML*LLGRCQ
Trigger: TTGGCAACGTCCTAGCAACAAAAGCATACAAGATCT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATTTTGCCAGCTGTGCTaGCACCACCTGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: TTLTNGLVFITINAKSMTFCQLC*HHLNTN
Trigger: ATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCA +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLFKQDL*PAVLAP
Trigger: TGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSEWMFC*VKRWQK
Trigger: CTTCTGCCAACGTTTTACCAAACAGAACATCCATTC...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp ATTACACTGCACAAATACAATATAGCTGAACCTCTTGAGCTGAAAGGAAGTTCCGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ITLHKYNIAEPLELKGSSEWMFC*VKRWQK
Trigger: CTTCTGCCAACGTTTTACCAAACAGAACATCCATTC...GGAACTTCCTTTCAGCTCAAGAGGTTCAGCTATATTGTATTTGTGCAGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACAAGCAAGGCCTTTCCTaGTTCTGCATGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNKQGLS*FCMSFS
Trigger: ACTGAAAGACATGCAGAACAAGGAAAGGCCTTGCTT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAAGCAAGGCCTTTCCTaGTTCTGCATGTCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLKQGLS*FCMSFS
Trigger: ACTGAAAGACATGCAGAACAAGGAAAGGCCTTGCTT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCTTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFFTVTL*LAAKSF
Trigger: AAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAA...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSTFTVT*LLAAKS
Trigger: GGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCTTCACAAATCTTCTGTaGCCTAATCTAGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFFTNLL*PNLATE
Trigger: CTCTGTTGCTAGATTAGGCAACAGAAGATTTGTGAA...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS-3UTR CAA 90 bp GAGCAAAAGGGATGTTACATCATGATAAAGAATTGGAACCTCAGGCTGTTGTTCAATTCAAGTTCTAAATaGGTTCAGCAAGGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: EQKGCYIMIKNWNLRLLFNSSSK*VQQGSR
Trigger: CCTGCTTCCTTGCTGAACCAATTTAGAACTTGAATT...GAACAACAGCCTGAGGTTCCAATTCTTTATCATGATGTAACATCCCTTTTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS TCA 90 bp CCTTCTAACATCGACCTCTCATGCTCTGCATCAAGTACTGTATTTTaGTGTTGTGATGCCATTGTCAACAAATCCACTACCTTAAATCTT +
Preference number: 5 (lower is better)
Translates to: PSNIDLSCSASSTVF*CCDAIVNKSTTLNL
Trigger: AAGATTTAAGGTAGTGGATTTGTTGACAATGGCATCACAACATCAAAATACAGTACTTGATGCAGAGCATGAGAGGTCGATGTTAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 90 bp TTTACAGTGCAAAAGTCTCATAAGACCTTTATAGCTAGGATGGAGTaGTGTCCTTTTCTTATATGGAGGCCAGGGATTTCCAGGAAATTT +
Preference number: 5 (lower is better)
Translates to: FTVQKSHKTFIARME*CPFLIWRPGISRKF
Trigger: AAATTTCCTGGAAATCCCTGGCCTCCATATAAGAAAAGGACATCACTCCATCCTAGCTATAAAGGTCTTATGAGACTTTTGCACTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACAGCAACCTTATACTCTaGATCTGGAAGCATGTTGAG +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNSNLIL*IWKHVE
Trigger: CTCAACATGCTTCCAGATCAAGAGTATAAGGTTGCT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTTCTTACCCACATATaGCTGTGGATTTCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSFLTHI*LWISAR
Trigger: TCTTGCAGAAATCCACAGCAATATGTGGGTAAGAAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACATGTGTGACCACAGGTTaGTACATAAACACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TTLTNGLVFITINAKSMTCVTTG*YINTSF
Trigger: GAAGGAGGTGTTTATGTACAAACCTGTGGTCACACA...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACAGATCTTGTATGCTTTaGTTGCTAGGACGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNRSCML*LLGRCQ
Trigger: TTGGCAACGTCCTAGCAACAAAAGCATACAAGATCT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAAGATCTTGTATGCTTTaGTTGCTAGGACGTTGCCAA +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLRSCML*LLGRCQ
Trigger: TTGGCAACGTCCTAGCAACAAAAGCATACAAGATCT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAGAATGGATGTTCTGTTaGGTAAAACGTTGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLEWMFC*VKRWQK
Trigger: CTTCTGCCAACGTTTTACCAAACAGAACATCCATTC...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSFTVTL*LAAKSF
Trigger: AAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAA...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAACATTCACAGTAACTTaGTTGCTTGCAGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLTFTVT*LLAAKS
Trigger: GGACTTTGCTGCAAGCAACAAAGTTACTGTGAATGT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GCAATATGTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCCCAAAGTACCAGGGATaGCTTGATAGCACTATATAT +
Preference number: 5 (lower is better)
Translates to: AICHMLFSNLPSHRVGFSPKYQG*LDSTIY
Trigger: ATATATAGTGCTATCAAGCAATCCCTGGTACTTTGG...GCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGACATATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS CCA 90 bp AAGGTGACCATTCTCTTATTCAAGGCAATACCACCCAATCTGCTCTaGGTACGTTGCTTAATTGATTCCTCAGAAAATTGTTTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: KVTILLFKAIPPNLL*VRCLIDSSENCFCF
Trigger: AAAACAAAAACAATTTTCTGAGGAATCAATTAAGCAACGTACCCAGAGCAGATTGGGTGGTATTGCCTTGAATAAGAGAATGGTCACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp ACCACACTTACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAAGCATCAAACCAGTCTaGAAGAGCTTCAAGGCAATA +
Preference number: 5 (lower is better)
Translates to: TTLTNGLVFITINAKSMTSIKPV*KSFKAI
Trigger: TATTGCCTTGAAGCTCTTCAAGACTGGTTTGATGCT...TGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTAAGTGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCATCTTCAATGATGCGTTaGTTCATTCTACTTTGCGAT +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSSSMMR*FILLCD
Trigger: ATCGCAAAGTAGAATGAACAAACGCATCATTGAAGA...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp TATACTCAGAGTCAATGCTATAAAGCCGCATGTGCAAGGCTAATACATGAAACATTCCTTTATGAGATCTaGTATGCTTTTGTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: YTQSQCYKAACARLIHETFLYEI*YAFVAR
Trigger: CCTAGCAACAAAAGCATACAAGATCTCATAAAGGAA...TGTTTCATGTATTAGCCTTGCACATGCGGCTTTATAGCATTGACTCTGAGTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430321.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTCACAGTAACTTTGTaGCTTGCAGCAAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLFTVTL*LAAKSF
Trigger: AAAGGACTTTGCTGCAAGCAACAAAGTTACTGTGAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS-3UTR CAA 90 bp GTCACATGCTTTTCAGTAATCTTCCTTCTCATAGAGTGGGTTTTAGCTCAATCAATGAGAAATCCACTGTaGCTCAAGAACTTTGTATCT +
Preference number: 5 (lower is better)
Translates to: VTCFSVIFLLIEWVLAQSMRNPL*LKNFVS
Trigger: AGATACAAAGTTCTTGAGCAACAGTGGATTTCTCAT...TGATTGAGCTAAAACCCACTCTATGAGAAGGAAGATTACTGAAAAGCATGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTACCAAAGTACCAGGGATaGCTTGATAGCACTATATAT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLPKYQG*LDSTIY
Trigger: ATATATAGTGCTATCAAGCAATCCCTGGTACTTTGG...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000444475.5
CDS GCA 90 bp TTAATATTCCTAAGTCTGTACATTTGCCACCCATTTCTAAAGGAATaGTTTAATCCTCTCTACTCAGGGTGGGAGAAAAAGCAATTTAAC +
Preference number: 5 (lower is better)
Translates to: LIFLSLYICHPFLKE*FNPLYSGWEKKQFN
Trigger: GTTAAATTGCTTTTTCTCCCACCCTGAGTAGAGAGGATTAAAGCATTCCTTTAGAAATGGGTGGCAAATGTACAGACTTAGGAATATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465630.1
CDS-3UTR CAA 90 bp TACAAATGGTCTGGTATTCATAACGATCAATGCAAAAAGTATGACAGGCTGAACATTTCGGGTATACTCTaGAGTTTCCCTAACTTTACA +
Preference number: 5 (lower is better)
Translates to: YKWSGIHNDQCKKYDRLNISGIL*SFPNFT
Trigger: TGTAAAGTTAGGGAAACTCAAGAGTATACCCGAAAT...GTTCAGCCTGTCATACTTTTTGCATTGATCGTTATGAATACCAGACCATTTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATCTTCAATGATGCGTTaGTTCATTCTACTTTGCGAT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLSSMMR*FILLCD
Trigger: ATCGCAAAGTAGAATGAACAAACGCATCATTGAAGA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTATTCCTTTATGAGATCTaGTATGCTTTTGTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLFLYEI*YAFVAR
Trigger: CCTAGCAACAAAAGCATACAAGATCTCATAAAGGAA...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
CDS-3UTR CAA 90 bp GCATTGTTGGGAGAATCATTTCTGAATGAGTTTGTGAACAAGTTGTGCTTCTTAATGAGAAATCCACTGTaGCTCAAGAACTTTGTATCT +
Preference number: 5 (lower is better)
Translates to: ALLGESFLNEFVNKLCFLMRNPL*LKNFVS
Trigger: AGATACAAAGTTCTTGAGCAACAGTGGATTTCTCAT...TAAGAAGCACAACTTGTTCACAAACTCATTCAGAAATGATTCTCCCAACAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000439681.1
ENST00000444475.5
CDS CAA 90 bp TCCGGCCGGCTGAGGGCCGCCTTGAGGTGCGCGGCGGTGGCCGCCTaGTCTAGGGCCAGCCCCGGCGCGGGCAGCTCGGGCTGTGACGGC +
Preference number: 6 (lower is better)
Translates to: SGRLRAALRCAAVAA*SRASPGAGSSGCDG
Trigger: GCCGTCACAGCCCGAGCTGCCCGCGCCGGGGCTGGCCCTAGACAAGGCGGCCACCGCCGCGCACCTCAAGGCGGCCCTCAGCCGGCCGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 72 bp CTGAGGGCCGCCTTGAGGTGCGCGGCGGTGGCCGCCTaGTCTAGGGCCAGCCCCGGCGCGGGCAGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: LRAALRCAAVAA*SRASPGAGSSG
Trigger: GCCCGAGCTGCCCGCGCCGGGGCTGGCCCTAGACAAGGCGGCCACCGCCGCGCACCTCAAGGCGGCCCTCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 90 bp AGCTCCTCAGCACCTGCGCGGTTGTCCGGCCGGCTGAGGGCCGCCTaGAGGTGCGCGGCGGTGGCCGCCTTGTCTAGGGCCAGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: SSSAPARLSGRLRAA*RCAAVAALSRASPG
Trigger: GCCGGGGCTGGCCCTAGACAAGGCGGCCACCGCCGCGCACCTCAAGGCGGCCCTCAGCCGGCCGGACAACCGCGCAGGTGCTGAGGAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 72 bp GCACCTGCGCGGTTGTCCGGCCGGCTGAGGGCCGCCTaGAGGTGCGCGGCGGTGGCCGCCTTGTCTAGGGCC +
Preference number: 6 (lower is better)
Translates to: APARLSGRLRAA*RCAAVAALSRA
Trigger: GGCCCTAGACAAGGCGGCCACCGCCGCGCACCTCAAGGCGGCCCTCAGCCGGCCGGACAACCGCGCAGGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 72 bp TCCAGCAGCGCCTGCAGCTCCTCAGCACCTGCGCGGTaGTCCGGCCGGCTGAGGGCCGCCTTGAGGTGCGCG +
Preference number: 6 (lower is better)
Translates to: SSSACSSSAPAR*SGRLRAALRCA
Trigger: CGCGCACCTCAAGGCGGCCCTCAGCCGGCCGGACAACCGCGCAGGTGCTGAGGAGCTGCAGGCGCTGCTGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 72 bp GGTCGCCCTGGTGGAAGCACTCGGCGCACAGCGACATaGAGGGCGAGATGCCGCACGTCCGGCAGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: GRPGGSTRRTAT*RARCRTSGSGR
Trigger: CCTACCGCTGCCGGACGTGCGGCATCTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp AGATGCCGCACGTCCGGCAGCGGTAGGCCACGAAGTTaGCTGTCCAGACCAGGCCGCAGAGCGCCGCGGGAT +
Preference number: 6 (lower is better)
Translates to: RCRTSGSGRPRS*LSRPGRRAPRD
Trigger: ATCCCGCGGCGCTCTGCGGCCTGGTCTGGACAGCCAACTTCGTGGCCTACCGCTGCCGGACGTGCGGCATCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 72 bp GGAAGCACTCGGCGCACAGCGACATGCAGGGCGAGATaGCGCACGTCCGGCAGCGGTAGGCCACGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: GSTRRTATCRAR*RTSGSGRPRSW
Trigger: CCAACTTCGTGGCCTACCGCTGCCGGACGTGCGGCATCTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp ACGTTGCTGTCCCCGCAGTCGCAGGCGCCCCCGGCCTaGCTGCGGAACATGTTGAAGTCGTGTCCGGTGTGG +
Preference number: 6 (lower is better)
Translates to: TLLSPQSQAPPA*LRNMLKSCPVW
Trigger: CCACACCGGACACGACTTCAACATGTTCCGCAGCCAGGCCGGGGGCGCCTGCGACTGCGGGGACAGCAACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp GCCTGGCTGCGGAACATGTTGAAGTCGTGTCCGGTGTaGTCGCCCTGGTGGAAGCACTCGGCGCACAGCGAC +
Preference number: 6 (lower is better)
Translates to: AWLRNMLKSCPV*SPWWKHSAHSD
Trigger: GTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGACACGACTTCAACATGTTCCGCAGCCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp CGGAACATGTTGAAGTCGTGTCCGGTGTGGTCGCCCTaGTGGAAGCACTCGGCGCACAGCGACATGCAGGGC +
Preference number: 6 (lower is better)
Translates to: RNMLKSCPVWSP*WKHSAHSDMQG
Trigger: GCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGACACGACTTCAACATGTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp AACATGTTGAAGTCGTGTCCGGTGTGGTCGCCCTGGTaGAAGCACTCGGCGCACAGCGACATGCAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: NMLKSCPVWSPW*KHSAHSDMQGE
Trigger: CTCGCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCGACCACACCGGACACGACTTCAACATGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 72 bp GGGGCCACTCTGTCCACAAATAACACAGTCATATACTaGCTCGGAAACCTGTGGTTCTGCCGTGGTGATCTC +
Preference number: 6 (lower is better)
Translates to: GATLSTNNTVIY*LGNLWFCRGDL
Trigger: GAGATCACCACGGCAGAACCACAGGTTTCCGAGGCAGTATATGACTGTGTTATTTGTGGACAGAGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS GCA 72 bp TTCTGTCGTGAAGCAAACTCCGCAAGCAATTTCTGCTaGCTCTCTCTAGCCTTCTGTCGCCTTTCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: FCREANSASNFC*LSLAFCRLSSL
Trigger: CAAAGAAGAAAGGCGACAGAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000487689.1
CDS GCA 72 bp CTTTTCTGTCGTGAAGCAAACTCCGCAAGCAATTTCTaGTGCCTCTCTCTAGCCTTCTGTCGCCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LFCREANSASNF*CLSLAFCRLSS
Trigger: AGAAGAAAGGCGACAGAAGGCTAGAGAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000487689.1
CDS CCA 72 bp AGCAATGAACTGTGTGTCCTGTCATTCATACACAGCTaGGCTACCATCTCGGCCCTGAGAATCTCATCATCA +
Preference number: 6 (lower is better)
Translates to: SNELCVLSFIHS*ATISALRISSS
Trigger: TGATGATGAGATTCTCAGGGCCGAGATGGTAGCCCAGCTGTGTATGAATGACAGGACACACAGTTCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp GAGCTGAACCAGGAGCAGACCATTTACTTGAAGTTTTaGGACGAACCACCTGATTTGCTTCACTGCTACTGC +
Preference number: 6 (lower is better)
Translates to: ELNQEQTIYLKF*DEPPDLLHCYC
Trigger: GCAGTAGCAGTGAAGCAAATCAGGTGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCTCCTGGTTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000477461.1
ENST00000487689.1
CDS TCA 72 bp ACTGTTCGAAGAATGACCATGACGGGGTCAAACTCTTaGTCCCAGACTTCAGCTTTGGGAGTATACATGCCT +
Preference number: 6 (lower is better)
Translates to: TVRRMTMTGSNS*SQTSALGVYMP
Trigger: AGGCATGTATACTCCCAAAGCTGAAGTCTGGGATCAAGAGTTTGACCCCGTCATGGTCATTCTTCGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp TTTGACACTAAGTTACTGCCAGGAAACCAACTGTCATaGCAACGTTCTGGTCCACCCACTGATGCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: FDTKLLPGNQLS*QRSGPPTDASS
Trigger: TGAAGAGGCATCAGTGGGTGGACCAGAACGTTGTCATGACAGTTGGTTTCCTGGCAGTAACTTAGTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS GCA 72 bp AACACAGTCATATACTGCCTCGGAAACCTGTGGTTCTaGCGTGGTGATCTCCATAGGAATATCATTCTCAGG +
Preference number: 6 (lower is better)
Translates to: NTVIYCLGNLWF*RGDLHRNIILR
Trigger: CCTGAGAATGATATTCCTATGGAGATCACCACGGCAGAACCACAGGTTTCCGAGGCAGTATATGACTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS GCA 72 bp AAATTTGTTTCTGATGGGAAAGCTCCCGGTCGTCCCTaGAGCTCCTCCACTTCCTTTATGAGATCTTGTATG +
Preference number: 6 (lower is better)
Translates to: KFVSDGKAPGRP*SSSTSFMRSCM
Trigger: CATACAAGATCTCATAAAGGAAGTGGAGGAGCTGCAGGGACGACCGGGAGCTTTCCCATCAGAAACAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000439681.1
CDS CAA 72 bp AACTGTTCGAAGAATGACCATGACGGGGTCAAACTCTaGATCCCAGACTTCAGCTTTGGGAGTATACATGCC +
Preference number: 6 (lower is better)
Translates to: NCSKNDHDGVKL*IPDFSFGSIHA
Trigger: GGCATGTATACTCCCAAAGCTGAAGTCTGGGATCAAGAGTTTGACCCCGTCATGGTCATTCTTCGAACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 72 bp TCCCAGACTTCAGCTTTGGGAGTATACATGCCTTGTTaGATAGAACCTCCAGGTTCAAAAACAGGAGCCTTA +
Preference number: 6 (lower is better)
Translates to: SQTSALGVYMPC*IEPPGSKTGAL
Trigger: TAAGGCTCCTGTTTTTGAACCTGGAGGTTCTATGCAACAAGGCATGTATACTCCCAAAGCTGAAGTCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 72 bp ATCCCAGACTTCAGCTTTGGGAGTATACATGCCTTGTaGCATAGAACCTCCAGGTTCAAAAACAGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: IPDFSFGSIHAL*HRTSRFKNRSL
Trigger: AAGGCTCCTGTTTTTGAACCTGGAGGTTCTATGCAACAAGGCATGTATACTCCCAAAGCTGAAGTCTGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 72 bp TTGATCCCAGACTTCAGCTTTGGGAGTATACATGCCTaGTTGCATAGAACCTCCAGGTTCAAAAACAGGAGC +
Preference number: 6 (lower is better)
Translates to: LIPDFSFGSIHA*LHRTSRFKNRS
Trigger: GCTCCTGTTTTTGAACCTGGAGGTTCTATGCAACAAGGCATGTATACTCCCAAAGCTGAAGTCTGGGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CAA 72 bp TTAACTGTGGAGCTGAACCAGGAGCAGACCATTTACTaGAAGTTTTGGGACGAACCACCTGATTTGCTTCAC +
Preference number: 6 (lower is better)
Translates to: LTVELNQEQTIY*KFWDEPPDLLH
Trigger: GTGAAGCAAATCAGGTGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGCTCCTGGTTCAGCTCCACAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000477461.1
ENST00000487689.1
CDS TCA 72 bp TGTCATTCATACACAGCTGGGCTACCATCTCGGCCCTaGGAATCTCATCATCAGACATTCCTAAATGTAAAC +
Preference number: 6 (lower is better)
Translates to: CHSYTAGLPSRP*ESHHQTFLNVN
Trigger: GTTTACATTTAGGAATGTCTGATGATGAGATTCTCAGGGCCGAGATGGTAGCCCAGCTGTGTATGAATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp GCAGACCATTTACTTGAAGTTTTGGGACGAACCACCTaGTTTGCTTCACTGCTACTGCGATTGATGATTTCC +
Preference number: 6 (lower is better)
Translates to: ADHLLEVLGRTT*FASLLLRLMIS
Trigger: GGAAATCATCAATCGCAGTAGCAGTGAAGCAAATCAGGTGGTTCGTCCCAAAACTTCAAGTAAATGGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000477461.1
ENST00000487689.1
CDS TCA 72 bp AACATCCATTGCAGTTTCCATAAAGCTTTTCTGTCGTaGAGCAAACTCCGCAAGCAATTTCTGCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: NIHCSFHKAFLS*SKLRKQFLLPL
Trigger: GAGAGGCAGCAGAAATTGCTTGCGGAGTTTGCTTCACGACAGAAAAGCTTTATGGAAACTGCAATGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
CDS CAA 72 bp AGCAAAAGTTTAAACAAGACCTTTTGCCAGCTGTGCTaGCACCACCTGAACACAAATTGCCTCCTCGATGAA +
Preference number: 6 (lower is better)
Translates to: SKSLNKTFCQLC*HHLNTNCLLDE
Trigger: TTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAACTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439681.1
CDS TCA 72 bp TTCCAAAAGCTGAAGGACTTTGTTAAGGTCCTTTTCTaGTGGTCCATCAGCTGCTGGTTCATTATAGCCTTC +
Preference number: 6 (lower is better)
Translates to: FQKLKDFVKVLF*WSISCWFIIAF
Trigger: GAAGGCTATAATGAACCAGCAGCTGATGGACCATCAGAAAAGGACCTTAACAAAGTCCTTCAGCTTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp ATGTATAATAGCACAGTGACCATAATATCCAGCAGCTaGCATTCTTCTGTTACCTGTCTGGCTAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: MYNSTVTIISSS*HSSVTCLASSS
Trigger: TGAGGAGCTAGCCAGACAGGTAACAGAAGAATGTCAGCTGCTGGATATTATGGTCACTGTGCTATTATACAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp GTGCTTGCACCACCTGAACACAAATTGCCTCCTCGATaGATCAATTCAAGTTCTAAATTGGTTCAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: VLAPPEHKLPPR*INSSSKLVQQG
Trigger: TCCTTGCTGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444475.5
CDS CCA 72 bp ACAAATAACACAGTCATATACTGCCTCGGAAACCTGTaGTTCTGCCGTGGTGATCTCCATAGGAATATCATT +
Preference number: 6 (lower is better)
Translates to: TNNTVIYCLGNL*FCRGDLHRNII
Trigger: AATGATATTCCTATGGAGATCACCACGGCAGAACCACAGGTTTCCGAGGCAGTATATGACTGTGTTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000392632.6
CDS CAA 90 bp GTTAGGTGCTGGCTCGTCTACGAAGTTAATAGCATCAAACCAGTCTaGAAGAGCTTCAAGGCAATATCTAACAACATTTCGGGTATACTC +
Preference number: 6 (lower is better)
Translates to: VRCWLVYEVNSIKPV*KSFKAISNNISGIL
Trigger: GAGTATACCCGAAATGTTGTTAGATATTGCCTTGAAGCTCTTCAAGACTGGTTTGATGCTATTAACTTCGTAGACGAGCCAGCACCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp GTTACCTGTCTGGCTAGCTCCTCATTGCTGAACAACTaGACACTAATATGCACAATTCTGTTAGACATTGTG +
Preference number: 6 (lower is better)
Translates to: VTCLASSSLLNN*TLICTILLDIV
Trigger: CACAATGTCTAACAGAATTGTGCATATTAGTGTTCAGTTGTTCAGCAATGAGGAGCTAGCCAGACAGGTAAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp GGCTCGTCTACGAAGTTAATAGCATCAAACCAGTCTTaGAGAGCTTCAAGGCAATATCTAACAACATTTCGG +
Preference number: 6 (lower is better)
Translates to: GSSTKLIASNQS*RASRQYLTTFR
Trigger: CCGAAATGTTGTTAGATATTGCCTTGAAGCTCTTCAAGACTGGTTTGATGCTATTAACTTCGTAGACGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp ATCGACCTCTCATGCTCTGCATCAAGTACTGTATTTTaGTGTTGTGATGCCATTGTCAACAAATCCACTACC +
Preference number: 6 (lower is better)
Translates to: IDLSCSASSTVF*CCDAIVNKSTT
Trigger: GGTAGTGGATTTGTTGACAATGGCATCACAACATCAAAATACAGTACTTGATGCAGAGCATGAGAGGTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS TCA 72 bp CAAAAGTCTCATAAGACCTTTATAGCTAGGATGGAGTaGTGTCCTTTTCTTATATGGAGGCCAGGGATTTCC +
Preference number: 6 (lower is better)
Translates to: QKSHKTFIARME*CPFLIWRPGIS
Trigger: GGAAATCCCTGGCCTCCATATAAGAAAAGGACATCACTCCATCCTAGCTATAAAGGTCTTATGAGACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000272793.11
ENST00000430321.5
CDS TCA 72 bp GTACAGGAGGGGTCACTTTTCTACATATCTCTTCAATaGTGCGTTTGTTCATTCTACTTTGCGATGCAGCTT +
Preference number: 6 (lower is better)
Translates to: VQEGSLFYISLQ*CVCSFYFAMQL
Trigger: AAGCTGCATCGCAAAGTAGAATGAACAAACGCATCATTGAAGAGATATGTAGAAAAGTGACCCCTCCTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000487689.1
CDS TCA 72 bp GTGCTTGCACCACCTGAACACAAATTGCCTCCTCGATaGATCAATTCAAGTTCTAAATTGGTTCTAGCAACA +
Preference number: 6 (lower is better)
Translates to: VLAPPEHKLPPR*INSSSKLVLAT
Trigger: TGTTGCTAGAACCAATTTAGAACTTGAATTGATTCATCGAGGAGGCAATTTGTGTTCAGGTGGTGCAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000439681.1
CDS GCA 72 bp CTAAGTCTGTACATTTGCCACCCATTTCTAAAGGAATaGTTTAATCCTCTCTACTCAGGGTGGGAGAAAAAG +
Preference number: 6 (lower is better)
Translates to: LSLYICHPFLKE*FNPLYSGWEKK
Trigger: CTTTTTCTCCCACCCTGAGTAGAGAGGATTAAAGCATTCCTTTAGAAATGGGTGGCAAATGTACAGACTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465630.1
CDS CAA 72 bp GGAATTACAGAAATGAGACTGGACATACGTCATGGCTaGTCCTTTGATTTGCAGACCATTTCTTACCCACAT +
Preference number: 6 (lower is better)
Translates to: GITEMRLDIRHG*SFDLQTISYPH
Trigger: ATGTGGGTAAGAAATGGTCTGCAAATCAAAGGACAAGCCATGACGTATGTCCAGTCTCATTTCTGTAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS CCA 72 bp TTTCTAAAGGAATGCTTTAATCCTCTCTACTCAGGGTaGGAGAAAAAGCAATTTAACACCGATAACGTTCCA +
Preference number: 6 (lower is better)
Translates to: FLKECFNPLYSG*EKKQFNTDNVP
Trigger: TGGAACGTTATCGGTGTTAAATTGCTTTTTCTCCCACCCTGAGTAGAGAGGATTAAAGCATTCCTTTAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465630.1
CDS CAA 72 bp GGAAAAATAATGAAGCAAAAGTTTAAACAAGACCTTTaGCCAGCTGTGCTTGCACCACCTGAACACAAATTG +
Preference number: 6 (lower is better)
Translates to: GKIMKQKFKQDL*PAVLAPPEHKL
Trigger: CAATTTGTGTTCAGGTGGTGCAAGCACAGCTGGCAAAAGGTCTTGTTTAAACTTTTGCTTCATTATTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439681.1
CDS TCA 72 bp CTCATGCTCTGCATCAAGTACTGTATTTTGATGTTGTaGTGCCATTGTCAACAAATCCACTACCTTAAATCT +
Preference number: 6 (lower is better)
Translates to: LMLCIKYCILML*CHCQQIHYLKS
Trigger: AGATTTAAGGTAGTGGATTTGTTGACAATGGCATCACAACATCAAAATACAGTACTTGATGCAGAGCATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272793.11
CDS GCA 72 bp CATATCTCTTCAATGATGCGTTTGTTCATTCTACTTTaGGATGCAGCTTTTAGTAAAATTCTTTCCACGGCA +
Preference number: 6 (lower is better)
Translates to: HISSMMRLFILL*DAAFSKILSTA
Trigger: TGCCGTGGAAAGAATTTTACTAAAAGCTGCATCGCAAAGTAGAATGAACAAACGCATCATTGAAGAGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272793.11
ENST00000392632.6
ENST00000430321.5
ENST00000487689.1