Pregenerated sensors for UBQLN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000160803

Ensembl transcript IDs: ENST00000368309.4, ENST00000459954.1

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CACAGCCTCAGACTCCCTGGGCACCCCCTACCACTGCAGGAAATCTaGCCAGCTTCTCCGGGGATCTCAAAGTATCCTGAAGGCCTAAGT	+
Preference number: 5 (lower is better) Translates to: HSLRLPGHPLPLQEI*PASPGISKYPEGLS Trigger: ACTTAGGCCTTCAGGATACTTTGAGATCCCCGGAGAAGCTGGCCAGATTTCCTGCAGTGGTAGGGGGTGCCCAGGGAGTCTGAGGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000459954.1
CDS CCA 72 bp	TTCACCCTAAGAATTCCCCCACAGCCTCAGACTCCCTaGGCACCCCCTACCACTGCAGGAAATCTGGCCAGC	+
Preference number: 6 (lower is better) Translates to: FTLRIPPQPQTP*APPTTAGNLAS Trigger: GCTGGCCAGATTTCCTGCAGTGGTAGGGGGTGCCCAGGGAGTCTGAGGCTGTGGGGGAATTCTTAGGGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000459954.1
CDS GCA 72 bp	AGCATCTCAGGATTGGACATCAGCTGCCGCTGCATCTaGTGCTGCAGCTCCATGAAGTTGGCAGAGCCCAGG	+
Preference number: 6 (lower is better) Translates to: SISGLDISCRCI*CCSSMKLAEPR Trigger: CCTGGGCTCTGCCAACTTCATGGAGCTGCAGCAGCAGATGCAGCGGCAGCTGATGTCCAATCCTGAGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368309.4
CDS CCA 72 bp	AGACTCCCTGGGCACCCCCTACCACTGCAGGAAATCTaGCCAGCTTCTCCGGGGATCTCAAAGTATCCTGAA	+
Preference number: 6 (lower is better) Translates to: RLPGHPLPLQEI*PASPGISKYPE Trigger: TTCAGGATACTTTGAGATCCCCGGAGAAGCTGGCCAGATTTCCTGCAGTGGTAGGGGGTGCCCAGGGAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000459954.1
CDS CCA 72 bp	CTAAGTGGGACAGTGAGAGGAAATGGAACTATGCTCTaGGTAATGAAGAGTATGAGGAGTCAGCCTGCTCAG	+
Preference number: 6 (lower is better) Translates to: LSGTVRGNGTML*VMKSMRSQPAQ Trigger: CTGAGCAGGCTGACTCCTCATACTCTTCATTACCCAGAGCATAGTTCCATTTCCTCTCACTGTCCCACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459954.1

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