RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBOX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000185019

Ensembl transcript IDs: ENST00000217173.7, ENST00000348031.6, ENST00000449731.1

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGCAGTCCGGCCCTCATCTGGGAGCGCCGTGCTGACGCTGACTaGACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAG +
Preference number: 1 (lower is better)
Translates to: GGSPALIWERRADAD*TLGLSGLGGQGFSE
Trigger: CTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACGGCGCTCCCAGATGAGGGCCGGACTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR GCA 90 bp ATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTaGTTAAGGGGAGGCAGTCCGGCCCTCATCTGGGAGCGCCGTGCT +
Preference number: 1 (lower is better)
Translates to: IPRDLQRSGQYLQHS*LRGGSPALIWERRA
Trigger: AGCACGGCGCTCCCAGATGAGGGCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 90 bp TACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCCCTCATCTaGGAGCGCCGTGCTGACGCTGACTGCACGCTAGGGCTCTCGGGG +
Preference number: 1 (lower is better)
Translates to: YLQHSCLRGGSPALI*ERRADADCTLGLSG
Trigger: CCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACGGCGCTCCCAGATGAGGGCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 90 bp ACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGATaGGCTCCCAGCAGCCAGAGCACACTGTGGGTGTCAAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: TLGLSGLGGQGFSER*APSSQSTLWVSSCW
Trigger: CCAGCAGCTTGACACCCACAGTGTGCTCTGGCTGCTGGGAGCCCATCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 90 bp CAGGGTTTCTCCGAGAGATGGGCTCCCAGCAGCCAGAGCACACTGTaGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCA +
Preference number: 1 (lower is better)
Translates to: QGFSERWAPSSQSTL*VSSCWWEAGCSLRP
Trigger: TGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTGCTCTGGCTGCTGGGAGCCCATCTCTCGGAGAAACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR TCA 90 bp GCACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTaGGACCATGACAGGGTGAAGGTGGGAATCACCAGCCCCCACACT +
Preference number: 1 (lower is better)
Translates to: AHCGCQAAGGKQAVP*DHDRVKVGITSPHT
Trigger: AGTGTGGGGGCTGGTGATTCCCACCTTCACCCTGTCATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR TCA 90 bp TTTGTTGCCCTATTGCCACCAGCGCAGAAGCAATGTGCTATACCGTaGGGTGATGAAGAAGAGCCCCGGGAGGGAGCAGGCAGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: FVALLPPAQKQCAIP*GDEEEPREGAGSSV
Trigger: CACAGAGCTGCCTGCTCCCTCCCGGGGCTCTTCTTCATCACCTCACGGTATAGCACATTGCTTCTGCGCTGGTGGCAATAGGGCAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR GCA 90 bp TTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTGCAGTGACTaGACACAGCTACCCTGTGAGCTCCACTTGTGTGGGTGCAGGTGG +
Preference number: 1 (lower is better)
Translates to: FQVIDRNDSLASCSD*TQLPCELHLCGCRW
Trigger: CCACCTGCACCCACACAAGTGGAGCTCACAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 90 bp GTCATGCACTCCACAGACACCCCCACTGCTCCCAAGGTCCACTTTTaGATGACCCTGAAGGCAGAGACTCCTGAGATCTGGGCCACAATC +
Preference number: 1 (lower is better)
Translates to: VMHSTDTPTAPKVHF*MTLKAETPEIWATI
Trigger: GATTGTGGCCCAGATCTCAGGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTGTCTGTGGAGTGCATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 90 bp GGCTTTTCTAAGAACACAAGCACACCGGAGGGTAAGACAAGATTCTaGAGAGGCACAGACCCAGAAAGCCAGGGGCACACAGGAGCCTCG +
Preference number: 1 (lower is better)
Translates to: GFSKNTSTPEGKTRF*RGTDPESQGHTGAS
Trigger: CGAGGCTCCTGTGTGCCCCTGGCTTTCTGGGTCTGTGCCTCTCCAGAATCTTGTCTTACCCTCCGGTGTGCTTGTGTTCTTAGAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR GCA 90 bp TTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTaGAGTGACTGCACACAGCTACCCTGTGAGCTCCACTTGTGTGGG +
Preference number: 1 (lower is better)
Translates to: FVSFQVIDRNDSLAS*SDCTQLPCELHLCG
Trigger: CCCACACAAGTGGAGCTCACAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTaGCAAGCTGCAGTGACTGCACACAGCTACCCTGTGAGCTCCACT +
Preference number: 1 (lower is better)
Translates to: NSSLCPFRSSTGMTA*QAAVTAHSYPVSST
Trigger: AGTGGAGCTCACAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CAA 90 bp TGGGAGCGCCGTGCTGACGCTGACTGCACGCTAGGGCTCTCGGGGTaGGGTGGACAGGGTTTCTCCGAGAGATGGGCTCCCAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: WERRADADCTLGLSG*GGQGFSERWAPSSQ
Trigger: CTGGCTGCTGGGAGCCCATCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACGGCGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCTGGGGCTGGCTCCAGTaGGTCCTGGGCTCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GNAALPLREQFLKPAEHSWGWLQ*VLGSGR
Trigger: CCTGCCTGAGCCCAGGACCCACTGGAGCCAGCCCCA...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCGGCCACAATCTAGGGTaGGCCACCCACAGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGGHNLG*ATHSAL
Trigger: CAGGGCACTGTGGGTGGCTCACCCTAGATTGTGGCC...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCTCTGTGCCTGGGGCCTaGCCAGACCTCAGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: GNAALPLREQFLKPAEHSSVPGA*PDLRGA
Trigger: AGCACCCCTGAGGTCTGGCCAGGCCCCAGGCACAGA...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCTCTTCCTGCCTAGGGTaGGGCTGGCTCCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGSSCLG*GWLQWV
Trigger: GACCCACTGGAGCCAGCCCCACCCTAGGCAGGAAGA...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCGGCGACAGGAGTGTGTaGCACAGACAGGCACTCCAC +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGGDRSV*HRQALH
Trigger: GTGGAGTGCCTGTCTGTGTCACACACTCCTGTCGCC...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGGGGTGCTGTGGCCCTaGTCCTGTTCCCCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLGVLWP*SCSPSA
Trigger: AGCTGAGGGGGAACAGGAGCAGGGCCACAGCACCCC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGAGCACAGCTGGCACTaGCCAGAGGGAGCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLEHSWH*PEGALH
Trigger: GTGGAGGGCTCCCTCTGGCCAGTGCCAGCTGTGCTC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCGGTTTCTCCGAGAGATaGGCTCCCAGCAGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGGFSER*APSSQS
Trigger: GCTCTGGCTGCTGGGAGCCCATCTCTCGGAGAAACC...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAGGCGACAGGAGTGTGTaGCACAGACAGGCACTCCAC +
Preference number: 2 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERGDRSV*HRQALH
Trigger: GTGGAGTGCCTGTCTGTGTCACACACTCCTGTCGCC...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCCACACAGCTACCCTGTaGGCTCCACTTGTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGHTATL*APLVWV
Trigger: CACCCACACAAGTGGAGCTCACAGGGTAGCTGTGTG...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCGGTCATCGACAGGAATaGCAGCCTGGCAAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGGHRQE*QPGKLQ
Trigger: CTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACC...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCTCTGTGCCTGGGGCCTaGCCAGACCTCAGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCSVPGA*PDLRGA
Trigger: AGCACCCCTGAGGTCTGGCCAGGCCCCAGGCACAGA...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCAGCCAGAGCACACTGTaGGTGTCAAGCTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGSQSTL*VSSCWW
Trigger: CCACCAGCAGCTTGACACCCACAGTGTGCTCTGGCT...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGTTTCTGAAGCCAGCTaGGCACAGCTGGCACTGGCC +
Preference number: 2 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLVSEAS*AQLALA
Trigger: GGCCAGTGCCAGCTGTGCTCAGCTGGCTTCAGAAAC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAGAGACCATGACAGGGTaGAGGTGGGAATCACCAGCC +
Preference number: 2 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERETMTG*RWESPA
Trigger: GGCTGGTGATTCCCACCTTCACCCTGTCATGGTCTC...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGACCGCCCTCTGGCCTATaGCTTTGTTGCCCTATTGCC +
Preference number: 2 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERPPSGL*LCCPIA
Trigger: GGCAATAGGGCAACAAAGCCATAGGCCAGAGGGCGG...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGGGGTGCTGTGGCCCTaGTCCTGTTCCCCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSEGVLWP*SCSPSA
Trigger: AGCTGAGGGGGAACAGGAGCAGGGCCACAGCACCCC...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCGGCCTATGGCTTTGTTaGCCTATTGCCACCAGCGCA +
Preference number: 2 (lower is better)
Translates to: GNAALPLREQFLKPAEHSGLWLC*PIATSA
Trigger: TGCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCC...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCAGCAGGGGTCTTCCTaGCTAGGGTGGGGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVQQGSS*LGWGWL
Trigger: GAGCCAGCCCCACCCTAGGCAGGAAGACCCCTGCTG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGTTGTGTGGGTGCAGGTaGGCGACAGGAGTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLLCGCR*ATGVCD
Trigger: GTCACACACTCCTGTCGCCCACCTGCACCCACACAA...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCACAGCAGGGGTCTTCCTaGCTAGGGTGGGGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPQQGSS*LGWGWL
Trigger: GAGCCAGCCCCACCCTAGGCAGGAAGACCCCTGCTG...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGACAGCCTGGCAAGCTaGAGTGACTGCACACAGCTA +
Preference number: 2 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLDSLAS*SDCTQL
Trigger: TAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGGCACAGGCCATCCATaGGGACCCTCAAATCTCATG +
Preference number: 2 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLGTGHP*GPSNLM
Trigger: CATGAGATTTGAGGGTCCGCATGGATGGCCTGTGCC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCGCTTTGTTGCCCTATTaGCACCAGCGCAGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: GNAALPLREQFLKPAEHSALLPY*HQRRSN
Trigger: ATTGCTTCTGCGCTGGTGGCAATAGGGCAACAAAGC...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAAGGCGAAGTGGCTCATaGCTGCAATCCAAGCACTTT +
Preference number: 2 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERRRSGS*LQSKHF
Trigger: AAAGTGCTTGGATTGCAGGCATGAGCCACTTCGCCT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCTCTTCCTGCCTAGGGTaGGGCTGGCTCCAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVSSCLG*GWLQWV
Trigger: GACCCACTGGAGCCAGCCCCACCCTAGGCAGGAAGA...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGATTTCCTGAAACCAACTaGATGAGGAAACGCTGCGCT +
Preference number: 2 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERFPETN*MRKRCA
Trigger: AGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGTTTCTGAAGCCAGCTaGGCACAGCTGGCACTGGCC +
Preference number: 2 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGVSEAS*AQLALA
Trigger: GGCCAGTGCCAGCTGTGCTCAGCTGGCTTCAGAAAC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGCTTTGTTGCCCTATTaGCACCAGCGCAGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSALLPY*HQRRSN
Trigger: ATTGCTTCTGCGCTGGTGGCAATAGGGCAACAAAGC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAACACTCACCAAGAAATaGTTTTGCTACATGCTGGGG +
Preference number: 2 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERTLTKK*FCYMLG
Trigger: CCCCAGCATGTAGCAAAAGCATTTCTTGGTGAGTGT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTGGACCTGCAGCGGTCTaGGCAGTACCTCCAACACAG +
Preference number: 2 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLGPAAV*AVPPTQ
Trigger: CTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCC...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACCTGGCAAGCTGCAGTaGCTGCACACAGCTACCCTG +
Preference number: 2 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEPGKLQ*LHTATL
Trigger: CAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTCTGTGGGTGTCAAGCTaGTGGTGGGAAGCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLLWVSS*WWEAGC
Trigger: ACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAG...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGACCGCCCTCTGGCCTATaGCTTTGTTGCCCTATTGCC +
Preference number: 2 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGPPSGL*LCCPIA
Trigger: GGCAATAGGGCAACAAAGCCATAGGCCAGAGGGCGG...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAACAGGAATGACAGCCTaGCAAGCTGCAGTGACTGCA +
Preference number: 2 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSETGMTA*QAAVTA
Trigger: TGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGT...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGGTCATCGACAGGAATaGCAGCCTGGCAAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEGHRQE*QPGKLQ
Trigger: CTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGATCAGGGAGCAGTTTCTaGAGCCAGCTGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGSGSSF*SQLSTA
Trigger: AGCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGA...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTCACAGACACCCCCACTaGTCCCAAGGTCCACTTTTG +
Preference number: 2 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAHRHPH*SQGPLL
Trigger: CAAAAGTGGACCTTGGGAGCAGTGGGGGTGTCTGTG...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGCCCACCTGCAAACCTaGGTTCTGAGTCCCCATGCA +
Preference number: 2 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEAHLQT*VLSPHA
Trigger: TGCATGGGGACTCAGAACCCAGGTTTGCAGGTGGGC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGGGCCACAATCTAGGGTaGGCCACCCACAGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: LYKASLGCSFPNVLRREQGHNLG*ATHSAL
Trigger: CAGGGCACTGTGGGTGGCTCACCCTAGATTGTGGCC...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTGAAGGCAGAGACTCCTaGGATCTGGGCCACAATCTA +
Preference number: 2 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLEGRDS*DLGHNL
Trigger: TAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCTTC...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTCAATGTGCTATACCGTaGGGTGATGAAGAAGAGCCC +
Preference number: 2 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLQCAIP*GDEEEP
Trigger: GGGCTCTTCTTCATCACCTCACGGTATAGCACATTG...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTCAATGTGCTATACCGTaGGGTGATGAAGAAGAGCCC +
Preference number: 2 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAQCAIP*GDEEEP
Trigger: GGGCTCTTCTTCATCACCTCACGGTATAGCACATTG...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAATAGTTCCTGCTACCTaGGAGGCTGAGGTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGIVPAT*EAEVEG
Trigger: TCCTTCTACCTCAGCCTCCCAGGTAGCAGGAACTAT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTATCTCATGTGAAGGCTaGATCAAGGTCAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLISCEG*IKVSAK
Trigger: CTTGGCACTGACCTTGATGCAGCCTTCACATGAGAT...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGTCAGGGAGCAGTTTCTaGAGCCAGCTGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: LYKASLGCSFPNVLRREQSGSSF*SQLSTA
Trigger: AGCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGA...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGCACAGACACCCCCACTaGTCCCAAGGTCCACTTTTG +
Preference number: 2 (lower is better)
Translates to: LYKASLGCSFPNVLRREQHRHPH*SQGPLL
Trigger: CAAAAGTGGACCTTGGGAGCAGTGGGGGTGTCTGTG...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGCAATGAGTTATGATTaGACCACTGCCCTCAAGCTT +
Preference number: 2 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGAMSYD*TTALKL
Trigger: AAGCTTGAGGGCAGTGGTGCAATCATAACTCATTGC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR GCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATTTTCCTGAAACCAACTaGATGAGGAAACGCTGCGCT +
Preference number: 2 (lower is better)
Translates to: SLKYWVWTRALDGLKERNFPETN*MRKRCA
Trigger: AGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR TCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTAACAAGTATTTTTCCTaGAACCAACTGCATGAGGAA +
Preference number: 2 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLNKYFS*NQLHEE
Trigger: TTCCTCATGCAGTTGGTTTCAGGAAAAATACTTGTT...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR GCA 72 bp CCGGCCCTCATCTGGGAGCGCCGTGCTGACGCTGACTaGACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGT +
Preference number: 3 (lower is better)
Translates to: PALIWERRADAD*TLGLSGLGGQG
Trigger: ACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACGGCGCTCCCAGATGAGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 72 bp CACAGCTGCTTAAGGGGAGGCAGTCCGGCCCTCATCTaGGAGCGCCGTGCTGACGCTGACTGCACGCTAGGG +
Preference number: 3 (lower is better)
Translates to: HSCLRGGSPALI*ERRADADCTLG
Trigger: CCCTAGCGTGCAGTCAGCGTCAGCACGGCGCTCCCAGATGAGGGCCGGACTGCCTCCCCTTAAGCAGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR GCA 72 bp GACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTaGTTAAGGGGAGGCAGTCCGGCCCTCATCTGGGAG +
Preference number: 3 (lower is better)
Translates to: DLQRSGQYLQHS*LRGGSPALIWE
Trigger: CTCCCAGATGAGGGCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 72 bp CTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGATaGGCTCCCAGCAGCCAGAGCACACTGTGGGTGTCA +
Preference number: 3 (lower is better)
Translates to: LSGLGGQGFSER*APSSQSTLWVS
Trigger: TGACACCCACAGTGTGCTCTGGCTGCTGGGAGCCCATCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR TCA 72 bp AGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATaGCAGGGTGAAGGTGGGAATCACCAGCCCCCACAC +
Preference number: 3 (lower is better)
Translates to: SCWWEAGCSLRP*QGEGGNHQPPH
Trigger: GTGTGGGGGCTGGTGATTCCCACCTTCACCCTGTCATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 72 bp CTCCACCCTCCCACCACGTATGCCCACCTGCAAACCTaGGTTCTGAGTCCCCATGCAGGGGACAGACCTGAA +
Preference number: 3 (lower is better)
Translates to: LHPPTTYAHLQT*VLSPHAGDRPE
Trigger: TTCAGGTCTGTCCCCTGCATGGGGACTCAGAACCCAGGTTTGCAGGTGGGCATACGTGGTGGGAGGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CAA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGGCTTTGTTGCCCTATaGCCACCAGCGCAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLGFVAL*PPAQKQ
Trigger: TTGCTTCTGCGCTGGTGGCAATAGGGCAACAAAGCC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CAA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCTGGCCTATGGCTTTGTaGCCCTATTGCCACCAGCGC +
Preference number: 3 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCWPMAL*PYCHQR
Trigger: GCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCCA...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR TCA 72 bp CTATTGCCACCAGCGCAGAAGCAATGTGCTATACCGTaGGGTGATGAAGAAGAGCCCCGGGAGGGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: LLPPAQKQCAIP*GDEEEPREGAG
Trigger: GCCTGCTCCCTCCCGGGGCTCTTCTTCATCACCTCACGGTATAGCACATTGCTTCTGCGCTGGTGGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 72 bp GTTAGAAATGCAGATCCCCAGGGACCTGCAGCGGTCTaGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: VRNADPQGPAAV*AVPPTQLLKGR
Trigger: CCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATTTCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR GCA 72 bp TTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTaGAGTGACTGCACACAGCTACCCTGTGAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: FQVIDRNDSLAS*SDCTQLPCELH
Trigger: GTGGAGCTCACAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CAA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGATGGCCTATGGCTTTGTaGCCCTATTGCCACCAGCGC +
Preference number: 3 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGWPMAL*PYCHQR
Trigger: GCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCCA...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CAA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGGCTTTGTTGCCCTATaGCCACCAGCGCAGAAGCAA +
Preference number: 3 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGGFVAL*PPAQKQ
Trigger: TTGCTTCTGCGCTGGTGGCAATAGGGCAACAAAGCC...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CAA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTCTCTGGCCTATGGCTTaGTTGCCCTATTGCCACCAG +
Preference number: 3 (lower is better)
Translates to: HSTRRKPTADVNHRFIKALWPMA*LPYCHQ
Trigger: CTGGTGGCAATAGGGCAACAAAGCCATAGGCCAGAG...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR-3UTR CAA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGTCTCTGAAGCCATCTTaGTGGACAAATGATGTAGGA +
Preference number: 3 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLSLKPS*WTNDVG
Trigger: TCCTACATCATTTGTCCACAAAGATGGCTTCAGAGA...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR TCA 72 bp AGAAGGGAACAGGGAAAGGCGGGTGTGTTTTCTCACTaGGGTTCTTCTAGTGGCTGGAATCTGATAGAGTAC +
Preference number: 3 (lower is better)
Translates to: RREQGKAGVFSH*GSSSGWNLIEY
Trigger: GTACTCTATCAGATTCCAGCCACTAGAAGAACCTCAGTGAGAAAACACACCCGCCTTTCCCTGTTCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 72 bp ACTAACCCCAAACCCAGATCTCTAAAGTATTGGGTGTaGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAAT +
Preference number: 3 (lower is better)
Translates to: TNPKPRSLKYWV*TRALDGLKERN
Trigger: ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGGTTTGGGGTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CCA 72 bp AAAGCAACTAACCCCAAACCCAGATCTCTAAAGTATTaGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAA +
Preference number: 3 (lower is better)
Translates to: KATNPKPRSLKY*VWTRALDGLKE
Trigger: TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGGTTTGGGGTTAGTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGACGCCTGCTGCGCGAGTaGCGGATGCGGCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERRLLRE*RMRPRL
Trigger: GAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCG...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR GCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCGCCGCTGGCAGGCTGTaGACGTCATGGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSAAGRL*TSWAGS
Trigger: GCTCCCTGCCCATGACGTGCACAGCCTGCCAGCGGC...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAGCCGCTGGCAGGCTGTaGACGTCATGGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERAAGRL*TSWAGS
Trigger: GCTCCCTGCCCATGACGTGCACAGCCTGCCAGCGGC...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCCGTGCTGACGCTGACTaGACGCTAGGGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGRADAD*TLGLSG
Trigger: CCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACG...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
3UTR CAA 72 bp CGTGCTGACGCTGACTGCACGCTAGGGCTCTCGGGGTaGGGTGGACAGGGTTTCTCCGAGAGATGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RADADCTLGLSG*GGQGFSERWAP
Trigger: GGGAGCCCATCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAGGGGTGCTGTGGCCCTaGTCCTGTTCCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERGVLWP*SCSPSA
Trigger: AGCTGAGGGGGAACAGGAGCAGGGCCACAGCACCCC...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAAGTCCGGCCCTCATCTaGGAGCGCCGTGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERSPALI*ERRADA
Trigger: AGCGTCAGCACGGCGCTCCCAGATGAGGGCCGGACT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGGTCAATCCGGGCCTTaGGGGAGGGGTGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSGQSGP*GRGEAG
Trigger: CCCTGCCTCACCCCTCCCTCAAGGCCCGGATTGACC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAATCTCGGCCAGCTTCTaGAGGCTGGAGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERISASF*RLEGAC
Trigger: GCAGGCTCCCTCCAGCCTGCAGAAGCTGGCCGAGAT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCAGATCCCCAGGGACCTaGAGCGGTCTGGGCAGTACC +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSRSPGT*SGLGST
Trigger: GGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCT...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAAGATCCCCAGGGACCTaGAGCGGTCTGGGCAGTACC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERRSPGT*SGLGST
Trigger: GGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCCCCAGGGTCCGGCACTaGGGCGTATTCCAAGACACT +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGPRVRH*GVFQDT
Trigger: AGTGTCTTGGAATACGCCCCAGTGCCGGACCCTGGG...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCTAGCAACCGGCCGCTaGCAGGCTGTGCACGTCATG +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSLATGR*QAVHVM
Trigger: CATGACGTGCACAGCCTGCCAGCGGCCGGTTGCTAG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCAGGCTGTGCACGTCATaGGCAGGGAGCGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGRLCTS*AGSVAS
Trigger: AGAAGCAACGCTCCCTGCCCATGACGTGCACAGCCT...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCTGGGTGTCAAGCTGCTaGTGGGAAGCAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGWVSSC*WEAGCS
Trigger: GGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCA...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGAGGCCAGTGACGTTCTaGCCTCCCCCAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMRPVTF*PPPAVR
Trigger: CCTCACAGCTGGGGGAGGTCAGAACGTCACTGGCCT...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGACTGAGGCAGGTTCTCTaGGGTGACCAGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERLRQVL*GDQQDA
Trigger: AGCATCCTGCTGGTCACCTCAGAGAACCTGCCTCAG...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGGCCACAATCTAGGGTaGGCCACCCACAGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSGHNLG*ATHSAL
Trigger: CAGGGCACTGTGGGTGGCTCACCCTAGATTGTGGCC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCGAGACCATGACAGGGTaGAGGTGGGAATCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSETMTG*RWESPA
Trigger: GGCTGGTGATTCCCACCTTCACCCTGTCATGGTCTC...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCAAGCAGGCTGTTCCCTaGGACCATGACAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGKQAVP*DHDRVK
Trigger: CTTCACCCTGTCATGGTCTCAGGGAACAGCCTGCTT...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCGACAGCCTGGCAAGCTaGAGTGACTGCACACAGCTA +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGDSLAS*SDCTQL
Trigger: TAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTC...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCGCCTTGAAGCCCCTGTaGCTAAACACCACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGALKPL*LNTTWL
Trigger: GAGCCAAGTGGTGTTTAGCCACAGGGGCTTCAAGGC...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCTGTCTATCACTTCCTaGGAGCAGGTCTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSLSITS*EQVLAG
Trigger: GCCGGCCAAGACCTGCTCCCAGGAAGTGATAGACAG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGTGCTGGCTCTCAGGCTaGTCCCCAGGGTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLCWLSG*SPGSQS
Trigger: TGACTGTGACCCTGGGGACCAGCCTGAGAGCCAGCA...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGCTAGCAACCGGCCGCTaGCAGGCTGTGCACGTCATG +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMLATGR*QAVHVM
Trigger: CATGACGTGCACAGCCTGCCAGCGGCCGGTTGCTAG...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCTCTTCCTGCCTAGGGTaGGGCTGGCTCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCSSCLG*GWLQWV
Trigger: GACCCACTGGAGCCAGCCCCACCCTAGGCAGGAAGA...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGGGTTTCTCCGAGAGATaGGCTCCCAGCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLGFSER*APSSQS
Trigger: GCTCTGGCTGCTGGGAGCCCATCTCTCGGAGAAACC...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCCACCAGAGCAGTCTTaGGGGCAGGAGCCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSPPEQS*GQEPVR
Trigger: TCTAACAGGCTCCTGCCCCCAAGACTGCTCTGGTGG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCAGGTCTTGGCCGGCTaGCCCCACACTTCCAACCGC +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVQVLAG*PHTSNR
Trigger: GCGGTTGGAAGTGTGGGGTCAGCCGGCCAAGACCTG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGACAGGCACATCCTGAATaGTCTCGGCCAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERQAHPE*SRPASA
Trigger: TGCAGAAGCTGGCCGAGATCATTCAGGATGTGCCTG...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGTCGATGACCTTGCCTaGGGGCAGCAGCATGGGACA +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSVDDLA*GQQHGT
Trigger: TGTCCCATGCTGCTGCCCTCAGGCAAGGTCATCGAC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGTGTGCTCTGGTCGATaGCCTTGCCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSVCSGR*PCLRAA
Trigger: TGCTGCCCTCAGGCAAGGTCATCGACCAGAGCACAC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGGGCGACAGGAGTGTGTaGCACAGACAGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMGDRSV*HRQALH
Trigger: GTGGAGTGCCTGTCTGTGTCACACACTCCTGTCGCC...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGGTTTCTGAAGCCAGCTaGGCACAGCTGGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMVSEAS*AQLALA
Trigger: GGCCAGTGCCAGCTGTGCTCAGCTGGCTTCAGAAAC...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCAGCCAGGGATGGAGTaGTGGAGCAGGAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSQPGME*WSRKWS
Trigger: TGACCATTTCCTGCTCCAGCACTCCATCCCTGGCTG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCAGGGATCACTGCCAATaGCGTCTGTGCTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSRDHCQ*RLCSPK
Trigger: CTTGGGAGAGCACAGACGGCATTGGCAGTGATCCCT...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAGGGGAGTCTAGGACCTaGAGAGGGAAAACACCTTCC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERGESRT*RGKTPS
Trigger: GGAAGGTGTTTTCCCTCTGCAGGTCCTAGACTCCCC...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR GCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCTGCGCGAGTGACGGATaGGGCCGAGGCTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCCASDG*GRGSKD
Trigger: GTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCA...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCTTAAGTGGGCCACGTaGCTAAGGGAAAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSLKWAT*LRERAP
Trigger: AGGGGCTCTTTCCCTTAGCCACGTGGCCCACTTAAG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAACCCGCAGCACGTCTTaGCTAGCAACCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSETRSTS*LATGRW
Trigger: CCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGT...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGTGCCTGGGGCCTaGCCAGACCTCAGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVSVPGA*PDLRGA
Trigger: AGCACCCCTGAGGTCTGGCCAGGCCCCAGGCACAGA...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGAGCACAGCTGGCACTaGCCAGAGGGAGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSEEHSWH*PEGALH
Trigger: GTGGAGGGCTCCCTCTGGCCAGTGCCAGCTGTGCTC...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGAGCCAGAGCACACTGTaGGTGTCAAGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLSQSTL*VSSCWW
Trigger: CCACCAGCAGCTTGACACCCACAGTGTGCTCTGGCT...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGAACACACGCAACTCCTaGGGGTGGCTCCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLNTRNS*GWLHLY
Trigger: GTACAGGTGGAGCCACCCCCAGGAGTTGCGTGTGTT...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCGGTCATCGACAGGAATaGCAGCCTGGCAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCGHRQE*QPGKLQ
Trigger: CTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACC...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCTGCAAACCTGGGTTCTaGGTCCCCATGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSCKPGF*VPMQGT
Trigger: TGTCCCCTGCATGGGGACTCAGAACCCAGGTTTGCA...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCCATGCCTCAGCCTCCTaGGTAGCTGGCATTACAGGC +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCHASAS*VAGITG
Trigger: GCCTGTAATGCCAGCTACTCAGGAGGCTGAGGCATG...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCGAGACCATGACAGGGTaGAGGTGGGAATCACCAGCC +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCETMTG*RWESPA
Trigger: GGCTGGTGATTCCCACCTTCACCCTGTCATGGTCTC...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGACTTTGTGACAGCTTCTaGTCGTGGGACAGTGGACCT +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERLCDSF*SWDSGP
Trigger: AGGTCCACTGTCCCACGAGCAGAAGCTGTCACAAAG...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCCTGTGGGTGTCAAGCTaGTGGTGGGAAGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCLWVSS*WWEAGC
Trigger: ACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAG...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGGCACTCGGCCCCATGTaGCTTCACTGCGGTTACACT +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMALGPM*LHCGYT
Trigger: AGTGTAACCGCAGTGAAGCCACATGGGGCCGAGTGC...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCCCATATGTGTCAGGCTaGGCTCATTGGTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGPYVSG*AHWWLS
Trigger: TGAAAGCCACCAATGAGCCCAGCCTGACACATATGG...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGATGGGGCTGGCTCCAGTaGGTCCTGGGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGWGWLQ*VLGSGR
Trigger: CCTGCCTGAGCCCAGGACCCACTGGAGCCAGCCCCA...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGGCCCACCTGCAAACCTaGGTTCTGAGTCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMAHLQT*VLSPHA
Trigger: TGCATGGGGACTCAGAACCCAGGTTTGCAGGTGGGC...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCCTAAAGTATTGGGTGTaGACTAGAGCTCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGLKYWV*TRALDG
Trigger: GCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAG...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCCTCCGTCGCCCAGGCTaGAGTACAGTGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSLRRPG*STVVRS
Trigger: AGATCTCACCACTGTACTCCAGCCTGGGCGACGGAG...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGTGTCAAGCTGCTGGTaGGAAGCAGGCTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSVSSCW*EAGCSL
Trigger: CAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACAC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGACACTTCCAACCGCTTaGTACAAGGGATACCGCCGC +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMTLPTA*YKGYRR
Trigger: GCGGCGGTATCCCTTGTATCAAGCGGTTGGAAGTGT...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGGCAGGTTCTCTGAGGTaGCCAGCAGGATGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMAGSLR*PAGCCL
Trigger: TAGACAGCATCCTGCTGGTCACCTCAGAGAACCTGC...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGACAATGTGCTATACCGTaGGGTGATGAAGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERQCAIP*GDEEEP
Trigger: GGGCTCTTCTTCATCACCTCACGGTATAGCACATTG...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGAGGGATCACTGCCAATaGCGTCTGTGCTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMRDHCQ*RLCSPK
Trigger: CTTGGGAGAGCACAGACGGCATTGGCAGTGATCCCT...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTATTCGGGGCCCAGGATaGTCCCAGGCTGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLIRGPG*SQAAPS
Trigger: GCTCGGAGCAGCCTGGGAGCATCCTGGGCCCCGAAT...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR CCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTGACAGATGGCTCAGCTaGGCCCAGGGTCCGGCACTG +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLDRWLS*AQGPAL
Trigger: CAGTGCCGGACCCTGGGCCCAGCTGAGCCATCTGTC...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCATACAGATCCTTAAGTaGGCCACGTGGCTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGIQILK*ATWLRE
Trigger: TTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTAT...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGTGCTGGAGCAGGAAATaGTCAATCCGGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMCWSRK*SIRALR
Trigger: CCTCAAGGCCCGGATTGACCATTTCCTGCTCCAGCA...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAACCCGCAGCACGTCTTaGCTAGCAACCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGTRSTS*LATGRW
Trigger: CCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGTCAGTCACTCAGAAGTaGACCCGCAGCACGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMSVTQK*TRSTSW
Trigger: CCAAGACGTGCTGCGGGTCCACTTCTGAGTGACTGA...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGACAGGAATGACAGCCTaGCAAGCTGCAGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLTGMTA*QAAVTA
Trigger: TGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGT...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCCACTGCCCTCAAGCTTaGGCAACAGAGACCAACCCT +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSHCPQA*ATETNP
Trigger: AGGGTTGGTCTCTGTTGCCCAAGCTTGAGGGCAGTG...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCATGCCCGGCCATGCTaGGGCTTTTCTAAGAACACA +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLHARPC*GFSKNT
Trigger: TGTGTTCTTAGAAAAGCCCCAGCATGGCCGGGCATG...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAAGTCCGGCCCTCATCTaGGAGCGCCGTGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGSPALI*ERRADA
Trigger: AGCGTCAGCACGGCGCTCCCAGATGAGGGCCGGACT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTAGGCCAGTGACGTTCTaGCCTCCCCCAGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLRPVTF*PPPAVR
Trigger: CCTCACAGCTGGGGGAGGTCAGAACGTCACTGGCCT...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAACTGAGGCAGGTTCTCTaGGGTGACCAGCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSELRQVL*GDQQDA
Trigger: AGCATCCTGCTGGTCACCTCAGAGAACCTGCCTCAG...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTGCAGAGCCACATCCTaGGGCAGGTTCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVCRATS*GRFSEV
Trigger: CACCTCAGAGAACCTGCCTCAGGATGTGGCTCTGCA...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGGAAGGCAGAGACTCCTaGGATCTGGGCCACAATCTA +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMEGRDS*DLGHNL
Trigger: TAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCTTC...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCCCTGGCAAGCTGCAGTaGCTGCACACAGCTACCCTG +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVPGKLQ*LHTATL
Trigger: CAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGG...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTATCTCGGCCAGCTTCTaGAGGCTGGAGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAISASF*RLEGAC
Trigger: GCAGGCTCCCTCCAGCCTGCAGAAGCTGGCCGAGAT...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCATCCCCTGGTCAGCCGTaGCGTGAAGGAGGGCATAGA +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPSPGQP*REGGHR
Trigger: TCTATGCCCTCCTTCACGGCACGGCTGACCAGGGGA...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCCCTCTTGTGCCAAGGTaGTGGAGCTGTCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVPLVPR*WSCPLV
Trigger: GACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGG...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGCTGCTCCGAGCCGGTaGCAGGCCTCCAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEAAPSR*QASRKC
Trigger: ACACTTCCTGGAGGCCTGGCACCGGCTCGGAGCAGC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGGGGTGCTGTGGCCCTaGTCCTGTTCCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEGVLWP*SCSPSA
Trigger: AGCTGAGGGGGAACAGGAGCAGGGCCACAGCACCCC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGCTACTTCCGCCTGCTaGGCGAGTGACGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEATSAC*ASDGCG
Trigger: GCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACCCGCTACTTCCGCCTaGTGCGCGAGTGACGGATGC +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEPATSA*CASDGC
Trigger: GCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR GCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTCCACTTCCGGCCAACTaGCCGCTACTTCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLPLPAN*PLLPPA
Trigger: AGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGG...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR CCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCATGGGTCTCCTCCAGTaGAGGTCAGTCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSMGLLQ*RSVTQK
Trigger: CTTCTGAGTGACTGACCTCCACTGGAGGAGACCCAT...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTGTGTGGGTGCAGGTaGGCGACAGGAGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALLCGCR*ATGVCD
Trigger: GTCACACACTCCTGTCGCCCACCTGCACCCACACAA...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCACAGGAATGACAGCCTaGCAAGCTGCAGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCTGMTA*QAAVTA
Trigger: TGCAGTCACTGCAGCTTGCCAGGCTGTCATTCCTGT...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAGCCCACCTGCAAACCTaGGTTCTGAGTCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALAHLQT*VLSPHA
Trigger: TGCATGGGGACTCAGAACCCAGGTTTGCAGGTGGGC...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGCATGCCCGGCCATGCTaGGGCTTTTCTAAGAACACA +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMHARPC*GFSKNT
Trigger: TGTGTTCTTAGAAAAGCCCCAGCATGGCCGGGCATG...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAACTCCGTCGCCCAGGCTaGAGTACAGTGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSELRRPG*STVVRS
Trigger: AGATCTCACCACTGTACTCCAGCCTGGGCGACGGAG...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTCGCAACTCCTGGGGGTaGCTCCACCTGTACCCAGGA +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKARNSWG*LHLYPG
Trigger: TCCTGGGTACAGGTGGAGCCACCCCCAGGAGTTGCG...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTAACACACGCAACTCCTaGGGGTGGCTCCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVNTRNS*GWLHLY
Trigger: GTACAGGTGGAGCCACCCCCAGGAGTTGCGTGTGTT...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGAGAAACAGAGCCCAGTaGTGCCTAGCATGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLRNRAQ*CLACFW
Trigger: CCAGAAACATGCTAGGCACCACTGGGCTCTGTTTCT...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGATACCATCTTTGTGGCTaGGAGGATATCTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERYHLCG*EDIFQA
Trigger: TGCTTGGAAGATATCCTCTCAGCCACAAAGATGGTA...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAAGTGAATTCTTGGTCTaGACTGTGGGAGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERSEFLV*TVGGKD
Trigger: ATCTTTGCCTCCCACAGTTCAGACCAAGAATTCACT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTACACTTCCAACCGCTTaGTACAAGGGATACCGCCGC +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVTLPTA*YKGYRR
Trigger: GCGGCGGTATCCCTTGTATCAAGCGGTTGGAAGTGT...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCTGCAGAGCCACATCCTaGGGCAGGTTCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVCRATS*GRFSEV
Trigger: CACCTCAGAGAACCTGCCTCAGGATGTGGCTCTGCA...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGTCGATGACCTTGCCTaGGGGCAGCAGCATGGGACA +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAVDDLA*GQQHGT
Trigger: TGTCCCATGCTGCTGCCCTCAGGCAAGGTCATCGAC...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATGGTCAATCCGGGCCTTaGGGGAGGGGTGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNGQSGP*GRGEAG
Trigger: CCCTGCCTCACCCCTCCCTCAAGGCCCGGATTGACC...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGGCGACAGGAGTGTGTaGCACAGACAGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGGDRSV*HRQALH
Trigger: GTGGAGTGCCTGTCTGTGTCACACACTCCTGTCGCC...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCATGCAAACCTGGGTTCTaGGTCCCCATGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPCKPGF*VPMQGT
Trigger: TGTCCCCTGCATGGGGACTCAGAACCCAGGTTTGCA...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATCAGGGAGCAGTTTCTaGAGCCAGCTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALSGSSF*SQLSTA
Trigger: AGCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGA...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCTTGAGCCCAGGAGTTTaGGACCAGTCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSLSPGV*DQSGQH
Trigger: ATGTTGTCCAGACTGGTCTCAAACTCCTGGGCTCAA...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAAAGCAGGCTGTTCCCTaGGACCATGACAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSEKQAVP*DHDRVK
Trigger: CTTCACCCTGTCATGGTCTCAGGGAACAGCCTGCTT...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAATGGGCAGGGAGCGTTaGTTCTCACCCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGMGRER*FSPRQG
Trigger: ACCCTGCCTGGGTGAGAAGCAACGCTCCCTGCCCAT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAGCAATGAGTTATGATTaGACCACTGCCCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERAMSYD*TTALKL
Trigger: AAGCTTGAGGGCAGTGGTGCAATCATAACTCATTGC...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCAGGCGAAGTGGCTCATaGCTGCAATCCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSRRSGS*LQSKHF
Trigger: AAAGTGCTTGGATTGCAGGCATGAGCCACTTCGCCT...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAGGCACAGGCCATCCATaGGGACCCTCAAATCTCATG +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALGTGHP*GPSNLM
Trigger: CATGAGATTTGAGGGTCCGCATGGATGGCCTGTGCC...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATACCTCCAACACAGCTaGTTAAGGGGAGGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALYLQHS*LRGGSP
Trigger: CGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTA...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCAACAGAGCCCAGTGGTaGCTAGCATGTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSNRAQW*LACFWQ
Trigger: TTGCCAGAAACATGCTAGGCACCACTGGGCTCTGTT...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGACCCAGGGTCCGGCACTaGGGCGTATTCCAAGACACT +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGPRVRH*GVFQDT
Trigger: AGTGTCTTGGAATACGCCCCAGTGCCGGACCCTGGG...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCGAACGCCTCCTTGTCTaGGACAGATGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVERLLV*DRWLSW
Trigger: CCAGCTGAGCCATCTGTCCCAGACAAGGAGGCGTTC...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTACACAGTCACTTTCCATaGGCAAGGCTGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALHSHFP*ARLEPA
Trigger: TGCAGGCTCCAGCCTTGCCCATGGAAAGTGACTGTG...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTTGCTGGCTCTCAGGCTaGTCCCCAGGGTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKACWLSG*SPGSQS
Trigger: TGACTGTGACCCTGGGGACCAGCCTGAGAGCCAGCA...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATGCTGGAGCAGGAAATaGTCAATCCGGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALCWSRK*SIRALR
Trigger: CCTCAAGGCCCGGATTGACCATTTCCTGCTCCAGCA...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGAGAGGGCAGAACAATaGAAGAAGGGATCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSERAEQ*KKGSLP
Trigger: TGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCGAGAGGGCAGAACAATaGAAGAAGGGATCACTGCCA +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCERAEQ*KKGSLP
Trigger: TGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTC...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTCTTGTGCCAAGGTGCTaGAGCTGTCCCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKALVPRC*SCPLVS
Trigger: GCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAG...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR CCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCACTGCCCTCAAGCTTaGGCAACAGAGACCAACCCT +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVHCPQA*ATETNP
Trigger: AGGGTTGGTCTCTGTTGCCCAAGCTTGAGGGCAGTG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACACTGTGGGTGTCAAGCTGCTGGTGGGAAGCAGGCTGTTCCCTGAGACCATGATAGTTCCTGCTACCTaGGAGGCTGAGGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTVGVKLLVGSRLFPETMIVPAT*EAEVEG
Trigger: TCCTTCTACCTCAGCCTCCCAGGTAGCAGGAACTAT...CATGGTCTCAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCACAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAGTGTCAAGCTGCTGGTaGGAAGCAGGCTGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPVSSCW*EAGCSL
Trigger: CAGGGAACAGCCTGCTTCCCACCAGCAGCTTGACAC...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGGTTTCTCCGAGAGATaGGCTCCCAGCAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGGFSER*APSSQS
Trigger: GCTCTGGCTGCTGGGAGCCCATCTCTCGGAGAAACC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGCTCTCGGGGTTGGGTaGACAGGGTTTCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGALGVG*TGFLRE
Trigger: CTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCTCTCGGGGTTGGGTaGACAGGGTTTCTCCGAGAG +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGALGVG*TGFLRE
Trigger: CTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGC...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGGACCTGCAGCGGTCTaGGCAGTACCTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGGPAAV*AVPPTQ
Trigger: CTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCCAGGGGCTCCCAGGCTaGATTTTCCACCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVQGLPG*IFHQSS
Trigger: ACTGCTCTGGTGGAAAATCCAGCCTGGGAGCCCCTG...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAACATTTCCAGGCCAGTaGCGTTCTGACCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGTFPGQ*RSDLPQ
Trigger: CTGGGGGAGGTCAGAACGTCACTGGCCTGGAAATGT...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAACATTTCCAGGCCAGTaGCGTTCTGACCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGTFPGQ*RSDLPQ
Trigger: CTGGGGGAGGTCAGAACGTCACTGGCCTGGAAATGT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCGCCTGTCACATGGGTaGTACAGATCCTTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVRLSHG*YRSLSG
Trigger: CCCACTTAAGGATCTGTATCACCCATGTGACAGGCG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATCAGGTCTTGGCCGGCTaGCCCCACACTTCCAACCGC +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNQVLAG*PHTSNR
Trigger: GCGGTTGGAAGTGTGGGGTCAGCCGGCCAAGACCTG...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCATCCTCAGGCACATCCTaGATGATCTCGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPSSGTS*MISASF
Trigger: GAAGCTGGCCGAGATCATTCAGGATGTGCCTGAGGA...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGTGTGCTCTGGTCGATaGCCTTGCCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEVCSGR*PCLRAA
Trigger: TGCTGCCCTCAGGCAAGGTCATCGACCAGAGCACAC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCTCAGGGAGCAGTTTCTaGAGCCAGCTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVSGSSF*SQLSTA
Trigger: AGCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGA...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACATGCCTCAGCCTCCTaGGTAGCTGGCATTACAGGC +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGHASAS*VAGITG
Trigger: GCCTGTAATGCCAGCTACTCAGGAGGCTGAGGCATG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCACAGCCAGGGATGGAGTaGTGGAGCAGGAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPQPGME*WSRKWS
Trigger: TGACCATTTCCTGCTCCAGCACTCCATCCCTGGCTG...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGATGCCAATGCCGTCTGTaGTCTCCCAAGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGCQCRL*SPKQVA
Trigger: TGCCACCTGCTTGGGAGAGCACAGACGGCATTGGCA...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAATTTTCTTAGCAGTGTaGTCTGAGGTAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERIFLAV*SEVVGK
Trigger: CTTACCCACTACCTCAGAGCACACTGCTAAGAAAAT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAGGCCTATGGCTTTGTTaGCCTATTGCCACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPGLWLC*PIATSA
Trigger: TGCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCC...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATCAGCAGGGGTCTTCCTaGCTAGGGTGGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNQQGSS*LGWGWL
Trigger: GAGCCAGCCCCACCCTAGGCAGGAAGACCCCTGCTG...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCGGCACAGGCCATCCATaGGGACCCTCAAATCTCATG +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVGTGHP*GPSNLM
Trigger: CATGAGATTTGAGGGTCCGCATGGATGGCCTGTGCC...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCTACCTCCAACACAGCTaGTTAAGGGGAGGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVYLQHS*LRGGSP
Trigger: CGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTA...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAGCCTTGAAGCCCCTGTaGCTAAACACCACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPALKPL*LNTTWL
Trigger: GAGCCAAGTGGTGTTTAGCCACAGGGGCTTCAAGGC...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCATTATTCCAGAGCTCCTaGGCCACAACAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPLFQSS*ATTAGE
Trigger: CTCCCCTGCTGTTGTGGCCCAGGAGCTCTGGAATAA...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCATACAGATCCTTAAGTaGGCCACGTGGCTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCIQILK*ATWLRE
Trigger: TTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTAT...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCCGCCGCCTGTCACATaGGTGATACAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVPPPVT*VIQILK
Trigger: CTTAAGGATCTGTATCACCCATGTGACAGGCGGCGG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACTGCTCGTGGGACAGTaGACCTGTCGAGCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGLLVGQ*TCRAVH
Trigger: ATGGACTGCTCGACAGGTCCACTGTCCCACGAGCAG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR CCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAATGGGTCTCCTCCAGTaGAGGTCAGTCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALMGLLQ*RSVTQK
Trigger: CTTCTGAGTGACTGACCTCCACTGGAGGAGACCCAT...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGATGGGTGTCAAGCTGCTaGTGGGAAGCAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGWVSSC*WEAGCS
Trigger: GGAACAGCCTGCTTCCCACCAGCAGCTTGACACCCA...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACCACCAGAGCAGTCTTaGGGGCAGGAGCCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGPPEQS*GQEPVR
Trigger: TCTAACAGGCTCCTGCCCCCAAGACTGCTCTGGTGG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACAGGGGCTCCCAGGCTaGATTTTCCACCAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGQGLPG*IFHQSS
Trigger: ACTGCTCTGGTGGAAAATCCAGCCTGGGAGCCCCTG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTCGCAACTCCTGGGGGTaGCTCCACCTGTACCCAGGA +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQARNSWG*LHLYPG
Trigger: TCCTGGGTACAGGTGGAGCCACCCCCAGGAGTTGCG...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGTCTGTCCTGAAACCATaGCTTCTCTTTGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLSVLKP*LLFVRS
Trigger: AGATCTCACAAAGAGAAGTCATGGTTTCAGGACAGA...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGCAGGTTCTCTGAGGTaGCCAGCAGGATGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGAGSLR*PAGCCL
Trigger: TAGACAGCATCCTGCTGGTCACCTCAGAGAACCTGC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCACACCGGCTCCTTTTTaGAGTAGGGAGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCTPAPF*SREKIL
Trigger: GAGTATTTTCTCCCTACTTCAAAAAGGAGCCGGTGT...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCACACCGGCTCCTTTTTaGAGTAGGGAGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSTPAPF*SREKIL
Trigger: GAGTATTTTCTCCCTACTTCAAAAAGGAGCCGGTGT...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCAATGTGCTATACCGTaGGGTGATGAAGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVQCAIP*GDEEEP
Trigger: GGGCTCTTCTTCATCACCTCACGGTATAGCACATTG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACACACAGCTACCCTGTaGGCTCCACTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEHTATL*APLVWV
Trigger: CACCCACACAAGTGGAGCTCACAGGGTAGCTGTGTG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTGTTTCTGAAGCCAGCTaGGCACAGCTGGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAVSEAS*AQLALA
Trigger: GGCCAGTGCCAGCTGTGCTCAGCTGGCTTCAGAAAC...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAGGTGTGTTTTCTCACTaGGGTTCTTCTAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALGVFSH*GSSSGW
Trigger: CCAGCCACTAGAAGAACCTCAGTGAGAAAACACACC...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCACCCATGTGGCTTCACTaGGGTTACACTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPPMWLH*GYTSPV
Trigger: CACTGGAGAAGTGTAACCGCAGTGAAGCCACATGGG...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCGGAAGAAGGGATCACTaGCAATGCCGTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVGRRDH*QCRLCS
Trigger: AGAGCACAGACGGCATTGGCAGTGATCCCTTCTTCC...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTTGTTGCTCCCTCTTGTaGCAAGGTGCTGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKACCSLL*QGAGAV
Trigger: GACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACA...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCCTCCAGGAAGTGTTaGTCCCTCTTGTGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAASRKC*SLLCQG
Trigger: ACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGC...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTATGGGCAGGGAGCGTTaGTTCTCACCCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAMGRER*FSPRQG
Trigger: ACCCTGCCTGGGTGAGAAGCAACGCTCCCTGCCCAT...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGGCCTATGGCTTTGTTaGCCTATTGCCACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGGLWLC*PIATSA
Trigger: TGCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCGCAATGAGTTATGATTaGACCACTGCCCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSAMSYD*TTALKL
Trigger: AAGCTTGAGGGCAGTGGTGCAATCATAACTCATTGC...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCACACTCACCAAGAAATaGTTTTGCTACATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCTLTKK*FCYMLG
Trigger: CCCCAGCATGTAGCAAAAGCATTTCTTGGTGAGTGT...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGCGTGCTGACGCTGACTaGACGCTAGGGCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQRADAD*TLGLSG
Trigger: CCCCGAGAGCCCTAGCGTGCAGTCAGCGTCAGCACG...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCTCTTGGTCTGAACTGTaGGAGGCAAAGATTTATTAC +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSSWSEL*EAKIYY
Trigger: GTAATAAATCTTTGCCTCCCACAGTTCAGACCAAGA...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGAACGCCTCCTTGTCTaGGACAGATGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEERLLV*DRWLSW
Trigger: CCAGCTGAGCCATCTGTCCCAGACAAGGAGGCGTTC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGATTATTCCAGAGCTCCTaGGCCACAACAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGLFQSS*ATTAGE
Trigger: CTCCCCTGCTGTTGTGGCCCAGGAGCTCTGGAATAA...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACACAGTCACTTTCCATaGGCAAGGCTGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGHSHFP*ARLEPA
Trigger: TGCAGGCTCCAGCCTTGCCCATGGAAAGTGACTGTG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGCACTCGGCCCCATGTaGCTTCACTGCGGTTACACT +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEALGPM*LHCGYT
Trigger: AGTGTAACCGCAGTGAAGCCACATGGGGCCGAGTGC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTACCATATGTGTCAGGCTaGGCTCATTGGTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALPYVSG*AHWWLS
Trigger: TGAAAGCCACCAATGAGCCCAGCCTGACACATATGG...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGACAGCTTCTGCTCGTaGGACAGTGGACCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEDSFCS*DSGPVE
Trigger: CTCGACAGGTCCACTGTCCCACGAGCAGAAGCTGTC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAATTGTGTGGGTGCAGGTaGGCGACAGGAGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKELCGCR*ATGVCD
Trigger: GTCACACACTCCTGTCGCCCACCTGCACCCACACAA...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGCCAGAGCACACTGTaGGTGTCAAGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKESQSTL*VSSCWW
Trigger: CCACCAGCAGCTTGACACCCACAGTGTGCTCTGGCT...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTGGACCTGCAGCGGTCTaGGCAGTACCTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAGPAAV*AVPPTQ
Trigger: CTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCC...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCCTGGATGGATCGCTCTaGAAGTCATTAAGCAGCTTA +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSLDGSL*KSLSSL
Trigger: TAAGCTGCTTAATGACTTCCAGAGCGATCCATCCAG...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACTTTGCCTACCAAGGTaGACGCCTCCTTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKELCLPR*TPPCLG
Trigger: TCCCAGACAAGGAGGCGTTCACCTTGGTAGGCAAAG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACAGGCACATCCTGAATaGTCTCGGCCAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEQAHPE*SRPASA
Trigger: TGCAGAAGCTGGCCGAGATCATTCAGGATGTGCCTG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATCCTGGCAAGCTGCAGTaGCTGCACACAGCTACCCTG +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNPGKLQ*LHTATL
Trigger: CAGGGTAGCTGTGTGCAGTCACTGCAGCTTGCCAGG...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTGGTCATCGACAGGAATaGCAGCCTGGCAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAGHRQE*QPGKLQ
Trigger: CTGCAGCTTGCCAGGCTGTCATTCCTGTCGATGACC...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGCCAAGGGTGGATaGCAAGGCAATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPRAKGG*QGNFQA
Trigger: AGCTTGGAAATTGCCTTGGCATCCACCCTTGGCTCT...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACACAGACACCCCCACTaGTCCCAAGGTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEHRHPH*SQGPLL
Trigger: CAAAAGTGGACCTTGGGAGCAGTGGGGGTGTCTGTG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTTTCCTGAAACCAACTaGATGAGGAAACGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVFPETN*MRKRCA
Trigger: AGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCAGGCGAAGTGGCTCATaGCTGCAATCCAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVRRSGS*LQSKHF
Trigger: AAAGTGCTTGGATTGCAGGCATGAGCCACTTCGCCT...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCTTATTACCATCTTTGTaGCTGAGAGGATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNAALPLREQFLKPAEHSLLPSL*LRGYLP
Trigger: TGGAAGATATCCTCTCAGCCACAAAGATGGTAATAA...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAAACTGTCACATAGACTaGTGGCTTAATGAAATACTC +
Preference number: 4 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERNCHID*WLNEIL
Trigger: GAGTATTTCATTAAGCCACCAGTCTATGTGACAGTT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGAACACCACTTGGCTCTaGTTTTTCAGTAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLNTTWL*FFSKTL
Trigger: CAAAGTCTTACTGAAAAACCAGAGCCAAGTGGTGTT...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACTTAAGTGGGCCACGTaGCTAAGGGAAAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKELKWAT*LRERAP
Trigger: AGGGGCTCTTTCCCTTAGCCACGTGGCCCACTTAAG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACCGCCGCCTGTCACATaGGTGATACAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGPPPVT*VIQILK
Trigger: CTTAAGGATCTGTATCACCCATGTGACAGGCGGCGG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTCTGTCTATCACTTCCTaGGAGCAGGTCTTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQALSITS*EQVLAG
Trigger: GCCGGCCAAGACCTGCTCCCAGGAAGTGATAGACAG...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTTTCTCCAGTGTGCTCTaGTCGATGACCTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLFSSVL*SMTLPE
Trigger: CTCAGGCAAGGTCATCGACCAGAGCACACTGGAGAA...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTCCGCCCTCTGGCCTATaGCTTTGTTGCCCTATTGCC +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAPPSGL*LCCPIA
Trigger: GGCAATAGGGCAACAAAGCCATAGGCCAGAGGGCGG...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCCTAAAGTATTGGGTGTaGACTAGAGCTCTGGACGGC +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVLKYWV*TRALDG
Trigger: GCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAG...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAAACAGAGCCCAGTaGTGCCTAGCATGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPRNRAQ*CLACFW
Trigger: CCAGAAACATGCTAGGCACCACTGGGCTCTGTTTCT...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAATACCATCTTTGTGGCTaGGAGGATATCTTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSEYHLCG*EDIFQA
Trigger: TGCTTGGAAGATATCCTCTCAGCCACAAAGATGGTA...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCTTCGTAACCATCAGCTaGTATCTTGTTGCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSFVTIS*YLVAVN
Trigger: ATTCACTGCAACAAGATATCAGCTGATGGTTACGAA...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATCTGAAACCAACTGCATaGGGAAACGCTGCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNLKPTA*GNAALP
Trigger: GGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAG...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGATTGAGCCCAGGAGTTTaGGACCAGTCTGGACAACAT +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGLSPGV*DQSGQH
Trigger: ATGTTGTCCAGACTGGTCTCAAACTCCTGGGCTCAA...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAGCTTTGTTGCCCTATTaGCACCAGCGCAGAAGCAAT +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGALLPY*HQRRSN
Trigger: ATTGCTTCTGCGCTGGTGGCAATAGGGCAACAAAGC...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCGTTGCAGTGAATTCTTaGTCTGAACTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVVAVNS*SELWEA
Trigger: TGCCTCCCACAGTTCAGACCAAGAATTCACTGCAAC...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGAACTGTCACATAGACTaGTGGCTTAATGAAATACTC +
Preference number: 4 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLNCHID*WLNEIL
Trigger: GAGTATTTCATTAAGCCACCAGTCTATGTGACAGTT...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAATTCTCCAGTGTGCTCTaGTCGATGACCTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEFSSVL*SMTLPE
Trigger: CTCAGGCAAGGTCATCGACCAGAGCACACTGGAGAA...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATAGGCTGTGCACGTCATaGGCAGGGAGCGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNRLCTS*AGSVAS
Trigger: AGAAGCAACGCTCCCTGCCCATGACGTGCACAGCCT...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTATAGTTCCTGCTACCTaGGAGGCTGAGGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLIVPAT*EAEVEG
Trigger: TCCTTCTACCTCAGCCTCCCAGGTAGCAGGAACTAT...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGGGAAAACACCTTCCTaGATGGATCGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAGKTPS*MDRSGS
Trigger: ACTTCCAGAGCGATCCATCCAGGAAGGTGTTTTCCC...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATCTTTGCCTACCAAGGTaGACGCCTCCTTGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNLCLPR*TPPCLG
Trigger: TCCCAGACAAGGAGGCGTTCACCTTGGTAGGCAAAG...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATTCCTCAGGCACATCCTaGATGATCTCGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNSSGTS*MISASF
Trigger: GAAGCTGGCCGAGATCATTCAGGATGTGCCTGAGGA...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTATCTTCCTTTTCTaGGAGGGCAGAACAATGGAA +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVSIFLF*EGRTME
Trigger: TTCCATTGTTCTGCCCTCTCAGAAAAGGAAGATAGA...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAAATTTCCAAGCTTTGTaGCAGCTTCTGCTCGTGGGA +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGNFQAL*QLLLVG
Trigger: TCCCACGAGCAGAAGCTGTCACAAAGCTTGGAAATT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR TCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGCACACAGCTACCCTGTaGGCTCCACTTGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQHTATL*APLVWV
Trigger: CACCCACACAAGTGGAGCTCACAGGGTAGCTGTGTG...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAGGTGTGTTTTCTCACTaGGGTTCTTCTAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEGVFSH*GSSSGW
Trigger: CCAGCCACTAGAAGAACCTCAGTGAGAAAACACACC...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGACTGGAGGACGTTGTTaGGGAGGCAGGGGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQTGGRC*GGRGSL
Trigger: TAGACTCCCCCTGCCTCCTCAACAACGTCCTCCAGT...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR GCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGTGCCAATGCCGTCTGTaGTCTCCCAAGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQCQCRL*SPKQVA
Trigger: TGCCACCTGCTTGGGAGAGCACAGACGGCATTGGCA...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATCACAGACACCCCCACTaGTCCCAAGGTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNHRHPH*SQGPLL
Trigger: CAAAAGTGGACCTTGGGAGCAGTGGGGGTGTCTGTG...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATGACAGCCTGGCAAGCTaGAGTGACTGCACACAGCTA +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNDSLAS*SDCTQL
Trigger: TAGCTGTGTGCAGTCACTGCAGCTTGCCAGGCTGTC...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAATCTCATGTGAAGGCTaGATCAAGGTCAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGISCEG*IKVSAK
Trigger: CTTGGCACTGACCTTGATGCAGCCTTCACATGAGAT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAACAGAGCCCAGTGGTaGCTAGCATGTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKENRAQW*LACFWQ
Trigger: TTGCCAGAAACATGCTAGGCACCACTGGGCTCTGTT...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTACCAAAGTTACTGTCTaGGACATGTTCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKATKVTV*DMFSLL
Trigger: GAGCAGGCTGAACATGTCCCAGACAGTAACTTTGGT...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGACCAAAGGGCTTGTaGCAGAAAAACAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPRPKGL*QKNRKH
Trigger: ATGCTTCCTGTTTTTCTGCCACAAGCCCTTTGGTCT...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCCAAGTTGTAGGGATATaGATATATTTTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCQVVGI*IYFPFG
Trigger: GCCAAAGGGAAAATATATCCATATCCCTACAACTTG...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTAAGGACATTTTCCACTaGAGGACGTTGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLKDIFH*RTLLRR
Trigger: CCTCCTCAACAACGTCCTCCAGTGGAAAATGTCCTT...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR TCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAGATATCTTGTTGCAGTaGATTCTTGGTCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALDILLQ*ILGLNC
Trigger: ACAGTTCAGACCAAGAATTCACTGCAACAAGATATC...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTAGACACTCTGCTAGATaGGGCAGATGTGTACATTTC +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKARHSAR*GRCVHF
Trigger: GAAATGTACACATCTGCCTCATCTAGCAGAGTGTCT...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAATTTTCTTAGCAGTGTaGTCTGAGGTAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPIFLAV*SEVVGK
Trigger: CTTACCCACTACCTCAGAGCACACTGCTAAGAAAAT...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTAACACCACTTGGCTCTaGTTTTTCAGTAAGACTTTG +
Preference number: 4 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVNTTWL*FFSKTL
Trigger: CAAAGTCTTACTGAAAAACCAGAGCCAAGTGGTGTT...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTAGACCAAAGGGCTTGTaGCAGAAAAACAGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKARPKGL*QKNRKH
Trigger: ATGCTTCCTGTTTTTCTGCCACAAGCCCTTTGGTCT...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAAAACACCTTCCTGGATaGATCGCTCTGGAAGTCATT +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGKHLPG*IALEVI
Trigger: AATGACTTCCAGAGCGATCCATCCAGGAAGGTGTTT...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR TCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTTCTGTCCTGAAACCATaGCTTCTCTTTGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKASVLKP*LLFVRS
Trigger: AGATCTCACAAAGAGAAGTCATGGTTTCAGGACAGA...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGCGCCTGTCACATGGGTaGTACAGATCCTTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQRLSHG*YRSLSG
Trigger: CCCACTTAAGGATCTGTATCACCCATGTGACAGGCG...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAAACAAGTATTTTTCCTaGAACCAACTGCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALNKYFS*NQLHEE
Trigger: TTCCTCATGCAGTTGGTTTCAGGAAAAATACTTGTT...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp GAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAAACAAGTATTTTTCCTaGAACCAACTGCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: ETNCMRKRCAPPQGAVSENKYFS*NQLHEE
Trigger: TTCCTCATGCAGTTGGTTTCAGGAAAAATACTTGTT...TTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGGGAAGAAGGGATCACTaGCAATGCCGTCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQGRRDH*QCRLCS
Trigger: AGAGCACAGACGGCATTGGCAGTGATCCCTTCTTCC...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAAGATCTCTAAAGTATTaGGTGTGGACTAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGRSLKY*VWTRAL
Trigger: CAGAGCTCTAGTCCACACCCAATACTTTAGAGATCT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCACTGAAGCCATCTTTGTaGACAAATGATGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPLKPSL*TNDVGT
Trigger: AGTTCCTACATCATTTGTCCACAAAGATGGCTTCAG...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTAGACACTCTGCTAGATaGGGCAGATGTGTACATTTC +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQARHSAR*GRCVHF
Trigger: GAAATGTACACATCTGCCTCATCTAGCAGAGTGTCT...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTACACTCACCAAGAAATaGTTTTGCTACATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQATLTKK*FCYMLG
Trigger: CCCCAGCATGTAGCAAAAGCATTTCTTGGTGAGTGT...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTTCTTGGTCTGAACTGTaGGAGGCAAAGATTTATTAC +
Preference number: 4 (lower is better)
Translates to: HSTRRKPTADVNHRFIKASWSEL*EAKIYY
Trigger: GTAATAAATCTTTGCCTCCCACAGTTCAGACCAAGA...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGATCTCTAAAGTATTaGGTGTGGACTAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKERSLKY*VWTRAL
Trigger: CAGAGCTCTAGTCCACACCCAATACTTTAGAGATCT...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGACTGAAGCCATCTTTGTaGACAAATGATGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGLKPSL*TNDVGT
Trigger: AGTTCCTACATCATTTGTCCACAAAGATGGCTTCAG...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATAGTGAATTCTTGGTCTaGACTGTGGGAGGCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNSEFLV*TVGGKD
Trigger: ATCTTTGCCTCCCACAGTTCAGACCAAGAATTCACT...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CTTTACAAAGCATCTTTAGGCTGTTCCTTCCCAAACGTGCTTAGAAGGGAACAGATCTCATGTGAAGGCTaGATCAAGGTCAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LYKASLGCSFPNVLRREQISCEG*IKVSAK
Trigger: CTTGGCACTGACCTTGATGCAGCCTTCACATGAGAT...CTGTTCCCTTCTAAGCACGTTTGGGAAGGAACAGCCTAAAGATGCTTTGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAACCAAGAAATGCTTTTaGTACATGCTGGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PRSLKYWVWTRALDGLKETKKCF*YMLGLF
Trigger: AAAAAGCCCCAGCATGTAGCAAAAGCATTTCTTGGT...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGATTATTACCATCTTTGTaGCTGAGAGGATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGLLPSL*LRGYLP
Trigger: TGGAAGATATCCTCTCAGCCACAAAGATGGTAATAA...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR GCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTACCAAGAAATGCTTTTaGTACATGCTGGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQATKKCF*YMLGLF
Trigger: AAAAAGCCCCAGCATGTAGCAAAAGCATTTCTTGGT...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR TCA 90 bp TCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAGGAATTTCGTAACCATCAGCTaGTATCTTGTTGCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SLKYWVWTRALDGLKERNFVTIS*YLVAVN
Trigger: ATTCACTGCAACAAGATATCAGCTGATGGTTACGAA...ATTCCTTTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CCA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTCAAGTTGTAGGGATATaGATATATTTTCCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAQVVGI*IYFPFG
Trigger: GCCAAAGGGAAAATATATCCATATCCCTACAACTTG...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 90 bp GCTCCTCCGGCGACTCCGAGCCTCACAGCCCCACTTCCGGCCAACTaGCCGCTACTTCCGCCTGCTGCGCGAGTGACGGATGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: APPATPSLTAPLPAN*PLLPPAARVTDAAE
Trigger: CTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGGGCTGTGAGGCTCGGAGTCGCCGGAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 90 bp TGCTCCCAGGCTGCTCCGAGCCGGTGCCAGGCCTCCAGGAAGTGTTaGTCCCTCTTGTGCCAAGGTGCTGGAGCTGTCCCCTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: CSQAAPSRCQASRKC*SLLCQGAGAVPWSA
Trigger: GGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCGGCTCGGAGCAGCCTGGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 90 bp CCTCACAGCCCCACTTCCGGCCAACTGCCCGCTACTTCCGCCTGCTaGGCGAGTGACGGATGCGGCCGAGGCTCAAAAGACTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: PHSPTSGQLPATSAC*ASDGCGRGSKDSVS
Trigger: GCTGACAGAGTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGGGCTGTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 90 bp GAGCCTCACAGCCCCACTTCCGGCCAACTGCCCGCTACTTCCGCCTaGTGCGCGAGTGACGGATGCGGCCGAGGCTCAAAAGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: EPHSPTSGQLPATSA*CASDGCGRGSKDSV
Trigger: GACAGAGTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGGGCTGTGAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CCA 90 bp TCGGCCAGCTTCTGCAGGCTGGAGGGAGCCTGCTGGCTCTCAGGCTaGTCCCCAGGGTCACAGTCACTTTCCATGGGCAAGGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: SASFCRLEGACWLSG*SPGSQSLSMGKAGA
Trigger: GGCTCCAGCCTTGCCCATGGAAAGTGACTGTGACCCTGGGGACCAGCCTGAGAGCCAGCAGGCTCCCTCCAGCCTGCAGAAGCTGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp CCCCACTTCCGGCCAACTGCCCGCTACTTCCGCCTGCTGCGCGAGTaGCGGATGCGGCCGAGGCTCAAAAGACTCTGTCAGCGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PHFRPTARYFRLLRE*RMRPRLKRLCQRFP
Trigger: TGGGAAACGCTGACAGAGTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 90 bp CCGGTGCCAGGCCTCCAGGAAGTGTTGCTCCCTCTTGTGCCAAGGTaGTGGAGCTGTCCCCTGGTCAGCCGTGCCGTGAAGGAGGGCATA +
Preference number: 5 (lower is better)
Translates to: PVPGLQEVLLPLVPR*WSCPLVSRAVKEGI
Trigger: TATGCCCTCCTTCACGGCACGGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CCA 90 bp ACTCAGAAGTGGACCCGCAGCACGTCTTGGCTAGCAACCGGCCGCTaGCAGGCTGTGCACGTCATGGGCAGGGAGCGTTGCTTCTCACCC +
Preference number: 5 (lower is better)
Translates to: TQKWTRSTSWLATGR*QAVHVMGRERCFSP
Trigger: GGGTGAGAAGCAACGCTCCCTGCCCATGACGTGCACAGCCTGCCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGTCCACTTCTGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp CTCCAGTGGAGGTCAGTCACTCAGAAGTGGACCCGCAGCACGTCTTaGCTAGCAACCGGCCGCTGGCAGGCTGTGCACGTCATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LQWRSVTQKWTRSTS*LATGRWQAVHVMGR
Trigger: CCTGCCCATGACGTGCACAGCCTGCCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGTCCACTTCTGAGTGACTGACCTCCACTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp GTGCCAGGCCTCCAGGAAGTGTTGCTCCCTCTTGTGCCAAGGTGCTaGAGCTGTCCCCTGGTCAGCCGTGCCGTGAAGGAGGGCATAGAG +
Preference number: 5 (lower is better)
Translates to: VPGLQEVLLPLVPRC*SCPLVSRAVKEGIE
Trigger: CTCTATGCCCTCCTTCACGGCACGGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CCA 90 bp CTCCCAGCAATGGGTCTCCTCCAGTGGAGGTCAGTCACTCAGAAGTaGACCCGCAGCACGTCTTGGCTAGCAACCGGCCGCTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LPAMGLLQWRSVTQK*TRSTSWLATGRWQA
Trigger: AGCCTGCCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGTCCACTTCTGAGTGACTGACCTCCACTGGAGGAGACCCATTGCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCAAAGGGGGCCTGGCCTaGAAGCCCCTGTGGCTAAAC +
Preference number: 5 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGKGGLA*KPLWLN
Trigger: GTTTAGCCACAGGGGCTTCAAGGCCAGGCCCCCTTT...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCTTCCACTGGAGGACGTaGTTGAGGAGGCAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGFHWRT*LRRQGE
Trigger: CTCCCCCTGCCTCCTCAACAACGTCCTCCAGTGGAA...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 90 bp GCTCCCTCTTGTGCCAAGGTGCTGGAGCTGTCCCCTGGTCAGCCGTaGCGTGAAGGAGGGCATAGAGCCAAGGGTGGATGCCAAGGCAAT +
Preference number: 5 (lower is better)
Translates to: APSCAKVLELSPGQP*REGGHRAKGGCQGN
Trigger: ATTGCCTTGGCATCCACCCTTGGCTCTATGCCCTCCTTCACGGCACGGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 90 bp TCCGGCCAACTGCCCGCTACTTCCGCCTGCTGCGCGAGTGACGGATaGGGCCGAGGCTCAAAAGACTCTGTCAGCGTTTCCCAAGGACAT +
Preference number: 5 (lower is better)
Translates to: SGQLPATSACCASDG*GRGSKDSVSVSQGH
Trigger: ATGTCCTTGGGAAACGCTGACAGAGTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CCA 90 bp GCCTACCAAGGTGAACGCCTCCTTGTCTGGGACAGATGGCTCAGCTaGGCCCAGGGTCCGGCACTGGGGCGTATTCCAAGACACTCTGCT +
Preference number: 5 (lower is better)
Translates to: AYQGERLLVWDRWLS*AQGPALGRIPRHSA
Trigger: AGCAGAGTGTCTTGGAATACGCCCCAGTGCCGGACCCTGGGCCCAGCTGAGCCATCTGTCCCAGACAAGGAGGCGTTCACCTTGGTAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCCACTGCCCTCAAGCTaGGGCAACAGAGACCAACCC +
Preference number: 5 (lower is better)
Translates to: GNAALPLREQFLKPAEHSPLPSS*GNRDQP
Trigger: GGGTTGGTCTCTGTTGCCCAAGCTTGAGGGCAGTGG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTAGGGCTCTCGGGGTaGGGTGGACAGGGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLLGLSG*GGQGFS
Trigger: GGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAG...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTTAAGGGGAGGCAGTCCGGCAAGGTGAACGCCTCCTaGTCTGGGACAGATGGCTCA +
Preference number: 5 (lower is better)
Translates to: AAVWAVPPTQLLKGRQSGKVNAS*SGTDGS
Trigger: TGAGCCATCTGTCCCAGACAAGGAGGCGTTCACCTT...GCCGGACTGCCTCCCCTTAAGCAGCTGTGTTGGAGGTACTGCCCAGACCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp GGGCAAGGCTGGAGCCTGCAGAGCCACATCCTGAGGCAGGTTCTCTaGGGTGACCAGCAGGATGCTGTCTATCACTTCCTGGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: GQGWSLQSHILRQVL*GDQQDAVYHFLGAG
Trigger: ACCTGCTCCCAGGAAGTGATAGACAGCATCCTGCTGGTCACCTCAGAGAACCTGCCTCAGGATGTGGCTCTGCAGGCTCCAGCCTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp CGGCCCCATGTGGCTTCACTGCGGTTACACTTCTCCAGTGTGCTCTaGTCGATGACCTTGCCTGAGGGCAGCAGCATGGGACAAGGCATG +
Preference number: 5 (lower is better)
Translates to: RPHVASLRLHFSSVL*SMTLPEGSSMGQGM
Trigger: CATGCCTTGTCCCATGCTGCTGCCCTCAGGCAAGGTCATCGACCAGAGCACACTGGAGAAGTGTAACCGCAGTGAAGCCACATGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp AGGCAGAGACTCCTGAGATCTGGGCCACAATCTAGGGTGAGCCACCCACAGTGCCTCTGGTCGATGACCTaGCCTGAGGGCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: RQRLLRSGPQSRVSHPQCLWSMT*PEGSSM
Trigger: CATGCTGCTGCCCTCAGGCAAGGTCATCGACCAGAG...GCACTGTGGGTGGCTCACCCTAGATTGTGGCCCAGATCTCAGGAGTCTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GCTGACTGCACGCTAGGGCTCTCGGGGTTGGGTGGACAGGGTTTCTCCGAGAGAAAGTGTTGCTCCCTCTaGTGCCAAGGTGCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: ADCTLGLSGLGGQGFSERKCCSL*CQGAGA
Trigger: AGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTT...TCTCTCGGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAGCGTGCAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR CAA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGTGGCCTATGGCTTTGTaGCCCTATTGCCACCAGCGC +
Preference number: 5 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLWPMAL*PYCHQR
Trigger: GCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCCA...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp AGCAGGATGCTGTCTATCACTTCCTGGGAGCAGGTCTTGGCCGGCTaGCCCCACACTTCCAACCGCTTGATACAAGGGATACCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: SRMLSITSWEQVLAG*PHTSNRLIQGIPPP
Trigger: AGGCGGCGGTATCCCTTGTATCAAGCGGTTGGAAGTGTGGGGTCAGCCGGCCAAGACCTGCTCCCAGGAAGTGATAGACAGCATCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp AGGCTGGAGCCTGCAGAGCCACATCCTGAGGCAGGTTCTCTGAGGTaGCCAGCAGGATGCTGTCTATCACTTCCTGGGAGCAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: RLEPAEPHPEAGSLR*PAGCCLSLPGSRSW
Trigger: CCAAGACCTGCTCCCAGGAAGTGATAGACAGCATCCTGCTGGTCACCTCAGAGAACCTGCCTCAGGATGTGGCTCTGCAGGCTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp ATGATCTCCAGGGTGATGGGATCCAGGAACTCCTCAGGCACATCCTaGATGATCTCGGCCAGCTTCTGCAGGCTGGAGGGAGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MISRVMGSRNSSGTS*MISASFCRLEGACW
Trigger: CCAGCAGGCTCCCTCCAGCCTGCAGAAGCTGGCCGAGATCATTCAGGATGTGCCTGAGGAGTTCCTGGATCCCATCACCCTGGAGATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp GGCAGGGGGAGTCTAGGACCTGCAGAGGGAAAACACCTTCCTGGATaGATCGCTCTGGAAGTCATTAAGCAGCTTAGTCCCGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: GRGSLGPAEGKHLPG*IALEVIKQLSPGAV
Trigger: CACCGCGCCGGGACTAAGCTGCTTAATGACTTCCAGAGCGATCCATCCAGGAAGGTGTTTTCCCTCTGCAGGTCCTAGACTCCCCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR CAA 90 bp AATGCAGATCCCCAGGGACCTGCAGCGGTCTGGGCAGTACCTCCAACACAGCTGCTCTGGCCTATGGCTTaGTTGCCCTATTGCCACCAG +
Preference number: 5 (lower is better)
Translates to: NADPQGPAAVWAVPPTQLLWPMA*LPYCHQ
Trigger: CTGGTGGCAATAGGGCAACAAAGCCATAGGCCAGAG...CAGCTGTGTTGGAGGTACTGCCCAGACCGCTGCAGGTCCCTGGGGATCTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCTAGGGCTCTCGGGGTaGGGTGGACAGGGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVLGLSG*GGQGFS
Trigger: GGAGAAACCCTGTCCACCCAACCCCGAGAGCCCTAG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp GCCCAGGGTCCGGCACTGGGGCGTATTCCAAGACACTCTGCTAGATaGGGCAGATGTGTACATTTCCAGGCCAGTGACGTTCTGACCTCC +
Preference number: 5 (lower is better)
Translates to: AQGPALGRIPRHSAR*GRCVHFQASDVLTS
Trigger: GGAGGTCAGAACGTCACTGGCCTGGAAATGTACACATCTGCCTCATCTAGCAGAGTGTCTTGGAATACGCCCCAGTGCCGGACCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp ACTGCGGTTACACTTCTCCAGTGTGCTCTGGTCGATGACCTTGCCTaGGGGCAGCAGCATGGGACAAGGCATGATCTCCAGGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: TAVTLLQCALVDDLA*GQQHGTRHDLQGDG
Trigger: CCCATCACCCTGGAGATCATGCCTTGTCCCATGCTGCTGCCCTCAGGCAAGGTCATCGACCAGAGCACACTGGAGAAGTGTAACCGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp CCGCCGCCTGTCACATGGGTGATACAGATCCTTAAGTGGGCCACGTaGCTAAGGGAAAGAGCCCCTTTATTCCAGAGCTCCTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: PPPVTWVIQILKWAT*LRERAPLFQSSWAT
Trigger: TGTGGCCCAGGAGCTCTGGAATAAAGGGGCTCTTTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTATCACCCATGTGACAGGCGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp TTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTCTCTGGTCGATGACCTaGCCTGAGGGCAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: FPETNCMRKRCAPPQGAVLWSMT*PEGSSM
Trigger: CATGCTGCTGCCCTCAGGCAAGGTCATCGACCAGAG...AACTGCTCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 90 bp CCTTTTCTGAGAGGGCAGAACAATGGAAGAAGGGATCACTGCCAATaGCGTCTGTGCTCTCCCAAGCAGGTGGCAGCCAGGGATGGAGTG +
Preference number: 5 (lower is better)
Translates to: PFLRGQNNGRRDHCQ*RLCSPKQVAARDGV
Trigger: CACTCCATCCCTGGCTGCCACCTGCTTGGGAGAGCACAGACGGCATTGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTCAGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCCCACTGCCCTCAAGCTaGGGCAACAGAGACCAACCC +
Preference number: 5 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVPLPSS*GNRDQP
Trigger: GGGTTGGTCTCTGTTGCCCAAGCTTGAGGGCAGTGG...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp GGGCATAGAGCCAAGGGTGGATGCCAAGGCAATTTCCAAGCTTTGTaGCAGCTTCTGCTCGTGGGACAGTGGACCTGTCGAGCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: GHRAKGGCQGNFQAL*QLLLVGQWTCRAVH
Trigger: ATGGACTGCTCGACAGGTCCACTGTCCCACGAGCAGAAGCTGTCACAAAGCTTGGAAATTGCCTTGGCATCCACCCTTGGCTCTATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 90 bp TTCCACTGGAGGACGTTGTTGAGGAGGCAGGGGGAGTCTAGGACCTaGAGAGGGAAAACACCTTCCTGGATGGATCGCTCTGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: FHWRTLLRRQGESRT*RGKTPSWMDRSGSH
Trigger: ATGACTTCCAGAGCGATCCATCCAGGAAGGTGTTTTCCCTCTGCAGGTCCTAGACTCCCCCTGCCTCCTCAACAACGTCCTCCAGTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CCA 90 bp CAAGGGATACCGCCGCCTGTCACATGGGTGATACAGATCCTTAAGTaGGCCACGTGGCTAAGGGAAAGAGCCCCTTTATTCCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGIPPPVTWVIQILK*ATWLRERAPLFQSS
Trigger: GGAGCTCTGGAATAAAGGGGCTCTTTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTATCACCCATGTGACAGGCGGCGGTATCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGAGGCCTCCAGGAAGTGTaGCTCCCTCTTGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGGLQEV*LPLVPR
Trigger: CCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCC...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS-3UTR CAA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCTGGCCTATGGCTTTGTaGCCCTATTGCCACCAGCGC +
Preference number: 5 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVWPMAL*PYCHQR
Trigger: GCGCTGGTGGCAATAGGGCAACAAAGCCATAGGCCA...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCCACCAAGAAATGCTTTaGCTACATGCTGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GNAALPLREQFLKPAEHSHQEML*LHAGAF
Trigger: AAAAGCCCCAGCATGTAGCAAAAGCATTTCTTGGTG...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGACACTGGAGGACGTTGTaGAGGAGGCAGGGGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGHWRTL*RRQGES
Trigger: AGACTCCCCCTGCCTCCTCAACAACGTCCTCCAGTG...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS-3UTR CAA 90 bp CCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCGAGTCAAGGTGAACGCCTCCTaGTCTGGGACAGATGGCTCA +
Preference number: 5 (lower is better)
Translates to: PGGNPQQTSTIALLRLRVKVNAS*SGTDGS
Trigger: TGAGCCATCTGTCCCAGACAAGGAGGCGTTCACCTT...GACTCGCAGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp GGAAACGCTGCGCTCCCCCTCAGGGAGCAGTTTCTGAAGCCAGCTGAGCACAGCTCTCTGAAGCCATCTTaGTGGACAAATGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: GNAALPLREQFLKPAEHSSLKPS*WTNDVG
Trigger: TCCTACATCATTTGTCCACAAAGATGGCTTCAGAGA...GCTGTGCTCAGCTGGCTTCAGAAACTGCTCCCTGAGGGGGAGCGCAGCGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 90 bp TATCTTCCTTTTCTGAGAGGGCAGAACAATGGAAGAAGGGATCACTaGCAATGCCGTCTGTGCTCTCCCAAGCAGGTGGCAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: YLPFLRGQNNGRRDH*QCRLCSPKQVAARD
Trigger: ATCCCTGGCTGCCACCTGCTTGGGAGAGCACAGACGGCATTGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTCAGAAAAGGAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp CACACTTCCAACCGCTTGATACAAGGGATACCGCCGCCTGTCACATaGGTGATACAGATCCTTAAGTGGGCCACGTGGCTAAGGGAAAGA +
Preference number: 5 (lower is better)
Translates to: HTSNRLIQGIPPPVT*VIQILKWATWLRER
Trigger: TCTTTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTATCACCCATGTGACAGGCGGCGGTATCCCTTGTATCAAGCGGTTGGAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CACCCCCACTGCTCCCAAGGTCCACTTTTGGATGACCCTGAAGGCAGAGACTCCTTTTTCAGTAAGACTTaGCCTACCAAGGTGAACGCC +
Preference number: 5 (lower is better)
Translates to: HPHCSQGPLLDDPEGRDSFFSKT*PTKVNA
Trigger: GGCGTTCACCTTGGTAGGCAAAGTCTTACTGAAAAA...GGAGTCTCTGCCTTCAGGGTCATCCAAAAGTGGACCTTGGGAGCAGTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp AATTCCAGTTTGTGTCCTTTCAGGTCATCGACAGGAATGACAGCCTGGCAAGCTAAAGGGGGCCTGGCCTaGAAGCCCCTGTGGCTAAAC +
Preference number: 5 (lower is better)
Translates to: NSSLCPFRSSTGMTAWQAKGGLA*KPLWLN
Trigger: GTTTAGCCACAGGGGCTTCAAGGCCAGGCCCCCTTT...AGCTTGCCAGGCTGTCATTCCTGTCGATGACCTGAAAGGACACAAACTGGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp AGTATTTTTCCTGAAACCAACTGCATGAGGAAACGCTGCGCTCCCCCTCAGGGACACACTTCCAACCGCTaGATACAAGGGATACCGCCG +
Preference number: 5 (lower is better)
Translates to: SIFPETNCMRKRCAPPQGHTSNR*IQGIPP
Trigger: CGGCGGTATCCCTTGTATCAAGCGGTTGGAAGTGTG...TCCCTGAGGGGGAGCGCAGCGTTTCCTCATGCAGTTGGTTTCAGGAAAAATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTCACACTTCCAACCGCTaGATACAAGGGATACCGCCG +
Preference number: 5 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAHTSNR*IQGIPP
Trigger: CGGCGGTATCCCTTGTATCAAGCGGTTGGAAGTGTG...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CAGAGCCCAGTGGTGCCTAGCATGTTTCTGGCAAGGGTAGTGAAAAGACCACTTGGCTTTGTTGCCCTATaGCCACCAGCGCAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: QSPVVPSMFLARVVKRPLGFVAL*PPAQKQ
Trigger: TTGCTTCTGCGCTGGTGGCAATAGGGCAACAAAGCC...AAGTGGTCTTTTCACTACCCTTGCCAGAAACATGCTAGGCACCACTGGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CCATCCATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCACTTGAGCCCAGGAGTTaGAGACCAGTCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: PSMRTLKSHVKAASRSVPLEPRS*RPVWTT
Trigger: TGTTGTCCAGACTGGTCTCAAACTCCTGGGCTCAAG...TGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCATGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp CTGCTAGATGAGGCAGATGTGTACATTTCCAGGCCAGTGACGTTCTaGCCTCCCCCAGCTGTGAGGTCTATGTTGATCCTACAGATTTCC +
Preference number: 5 (lower is better)
Translates to: LLDEADVYISRPVTF*PPPAVRSMLILQIS
Trigger: GGAAATCTGTAGGATCAACATAGACCTCACAGCTGGGGGAGGTCAGAACGTCACTGGCCTGGAAATGTACACATCTGCCTCATCTAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 90 bp CATGTTCAGCCTGCTCTATCTTCCTTTTCTGAGAGGGCAGAACAATaGAAGAAGGGATCACTGCCAATGCCGTCTGTGCTCTCCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HVQPALSSFSERAEQ*KKGSLPMPSVLSQA
Trigger: TGCTTGGGAGAGCACAGACGGCATTGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTCAGAAAAGGAAGATAGAGCAGGCTGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CAGACAGGCACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTAGCTGTGAGGTCTATGTaGATCCTACAGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: QTGTPPGGNPQQTSTIALAVRSM*ILQIST
Trigger: TGTGGAAATCTGTAGGATCAACATAGACCTCACAGC...TAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTGCCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAACTTGAGCCCAGGAGTTaGAGACCAGTCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: PRSLKYWVWTRALDGLKELEPRS*RPVWTT
Trigger: TGTTGTCCAGACTGGTCTCAAACTCCTGGGCTCAAG...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp AAGTTACTGTCTGGGACATGTTCAGCCTGCTCTATCTTCCTTTTCTaGGAGGGCAGAACAATGGAAGAAGGGATCACTGCCAATGCCGTC +
Preference number: 5 (lower is better)
Translates to: KLLSGTCSACSIFLF*EGRTMEEGITANAV
Trigger: GACGGCATTGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTCAGAAAAGGAAGATAGAGCAGGCTGAACATGTCCCAGACAGTAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CACTCCACCAGGAGGAAACCCACAGCAGACGTCAACCATCGCTTTATTAAGGCTGCTGTGAGGTCTATGTaGATCCTACAGATTTCCACA +
Preference number: 5 (lower is better)
Translates to: HSTRRKPTADVNHRFIKAAVRSM*ILQIST
Trigger: TGTGGAAATCTGTAGGATCAACATAGACCTCACAGC...AGCCTTAATAAAGCGATGGTTGACGTCTGCTGTGGGTTTCCTCCTGGTGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGATCTCTGAAGCCATCTTaGTGGACAAATGATGTAGGA +
Preference number: 5 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGSLKPS*WTNDVG
Trigger: TCCTACATCATTTGTCCACAAAGATGGCTTCAGAGA...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp TGGTCTGAACTGTGGGAGGCAAAGATTTATTACCATCTTTGTGGCTaGGAGGATATCTTCCAAGCATCAGAAGCAGCCTTTCTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: WSELWEAKIYYHLCG*EDIFQASEAAFLPS
Trigger: GGAAGGGAGAAAGGCTGCTTCTGATGCTTGGAAGATATCCTCTCAGCCACAAAGATGGTAATAAATCTTTGCCTCCCACAGTTCAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449731.1
CDS-3UTR CAA 90 bp ATGCGGACCCTCAAATCTCATGTGAAGGCTGCATCAAGGTCAGTGCCAAGAGGAAAAGACCACTTCCTTTaGGGGGAAGTCTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: MRTLKSHVKAASRSVPRGKDHFL*GEVFQL
Trigger: TAATTGAAAGACTTCCCCCAAAAGGAAGTGGTCTTT...TCCTCTTGGCACTGACCTTGATGCAGCCTTCACATGAGATTTGAGGGTCCGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS-3UTR CAA 90 bp CCCAGATCTCTAAAGTATTGGGTGTGGACTAGAGCTCTGGACGGCCTAAAGGAAAAAGACCACTTCCTTTaGGGGGAAGTCTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: PRSLKYWVWTRALDGLKEKDHFL*GEVFQL
Trigger: TAATTGAAAGACTTCCCCCAAAAGGAAGTGGTCTTT...TTCCTTTAGGCCGTCCAGAGCTCTAGTCCACACCCAATACTTTAGAGATCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 90 bp CTTCGTAACCATCAGCTGATATCTTGTTGCAGTGAATTCTTGGTCTaGACTGTGGGAGGCAAAGATTTATTACCATCTTTGTGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LRNHQLISCCSEFLV*TVGGKDLLPSLWLR
Trigger: TCTCAGCCACAAAGATGGTAATAAATCTTTGCCTCCCACAGTTCAGACCAAGAATTCACTGCAACAAGATATCAGCTGATGGTTACGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217173.7
ENST00000348031.6
ENST00000449731.1
CDS TCA 90 bp TGTGAGGTCTATGTTGATCCTACAGATTTCCACATTAAAGGGAAATaGAACTGTCACATAGACTGGTGGCTTAATGAAATACTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: CEVYVDPTDFHIKGK*NCHIDWWLNEILCP
Trigger: AGGACAGAGTATTTCATTAAGCCACCAGTCTATGTGACAGTTTCATTTCCCTTTAATGTGGAAATCTGTAGGATCAACATAGACCTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217173.7
ENST00000348031.6
ENST00000449731.1
CDS GCA 72 bp GCGACTCCGAGCCTCACAGCCCCACTTCCGGCCAACTaGCCGCTACTTCCGCCTGCTGCGCGAGTGACGGAT +
Preference number: 6 (lower is better)
Translates to: ATPSLTAPLPAN*PLLPPAARVTD
Trigger: ATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGGGCTGTGAGGCTCGGAGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 72 bp GCTGCTCCGAGCCGGTGCCAGGCCTCCAGGAAGTGTTaGTCCCTCTTGTGCCAAGGTGCTGGAGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: AAPSRCQASRKC*SLLCQGAGAVP
Trigger: GGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCGGCTCGGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 72 bp CCCACTTCCGGCCAACTGCCCGCTACTTCCGCCTGCTaGGCGAGTGACGGATGCGGCCGAGGCTCAAAAGAC +
Preference number: 6 (lower is better)
Translates to: PTSGQLPATSAC*ASDGCGRGSKD
Trigger: GTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 72 bp AGCCCCACTTCCGGCCAACTGCCCGCTACTTCCGCCTaGTGCGCGAGTGACGGATGCGGCCGAGGCTCAAAA +
Preference number: 6 (lower is better)
Translates to: SPTSGQLPATSA*CASDGCGRGSK
Trigger: TTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCGGAAGTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CAA 72 bp GGCTGCTCCGAGCCGGTGCCAGGCCTCCAGGAAGTGTaGCTCCCTCTTGTGCCAAGGTGCTGGAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: GCSEPVPGLQEV*LPLVPRCWSCP
Trigger: GGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCGGCTCGGAGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CAA 90 bp ATGCTCCCAGGCTGCTCCGAGCCGGTGCCAGGCCTCCAGGAAGTGTaGCTCCCTCTTGTGCCAAGGTGCTGGAGCTGTCCCCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: MLPGCSEPVPGLQEV*LPLVPRCWSCPLVS
Trigger: GCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCGGCTCGGAGCAGCCTGGGAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS TCA 72 bp CGGCCAACTGCCCGCTACTTCCGCCTGCTGCGCGAGTaGCGGATGCGGCCGAGGCTCAAAAGACTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: RPTARYFRLLRE*RMRPRLKRLCQ
Trigger: CTGACAGAGTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAGTTGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS GCA 72 bp CGGTGCCAGGCCTCCAGGAAGTGTTGCTCCCTCTTGTaGCAAGGTGCTGGAGCTGTCCCCTGGTCAGCCGTG +
Preference number: 6 (lower is better)
Translates to: RCQASRKCCSLL*QGAGAVPWSAV
Trigger: CACGGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 72 bp ATACTCTTTTGCAGGAGGCACATTCGGGGCCCAGGATaGTCCCAGGCTGCTCCGAGCCGGTGCCAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: ILFCRRHIRGPG*SQAAPSRCQAS
Trigger: GGAGGCCTGGCACCGGCTCGGAGCAGCCTGGGAGCATCCTGGGCCCCGAATGTGCCTCCTGCAAAAGAGTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CAA 72 bp AGCCGGTGCCAGGCCTCCAGGAAGTGTTGCTCCCTCTaGTGCCAAGGTGCTGGAGCTGTCCCCTGGTCAGCC +
Preference number: 6 (lower is better)
Translates to: SRCQASRKCCSL*CQGAGAVPWSA
Trigger: GGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCCTGGCACCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CAA 90 bp CCTCCAGTGGAGGTCAGTCACTCAGAAGTGGACCCGCAGCACGTCTaGGCTAGCAACCGGCCGCTGGCAGGCTGTGCACGTCATGGGCAG +
Preference number: 6 (lower is better)
Translates to: PPVEVSHSEVDPQHV*ASNRPLAGCARHGQ
Trigger: CTGCCCATGACGTGCACAGCCTGCCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGTCCACTTCTGAGTGACTGACCTCCACTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 72 bp TGTGCCAAGGTGCTGGAGCTGTCCCCTGGTCAGCCGTaGCGTGAAGGAGGGCATAGAGCCAAGGGTGGATGC +
Preference number: 6 (lower is better)
Translates to: CAKVLELSPGQP*REGGHRAKGGC
Trigger: GCATCCACCCTTGGCTCTATGCCCTCCTTCACGGCACGGCTGACCAGGGGACAGCTCCAGCACCTTGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 72 bp GGCCTCCAGGAAGTGTTGCTCCCTCTTGTGCCAAGGTaGTGGAGCTGTCCCCTGGTCAGCCGTGCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: GLQEVLLPLVPR*WSCPLVSRAVK
Trigger: CTTCACGGCACGGCTGACCAGGGGACAGCTCCAGCACCTTGGCACAAGAGGGAGCAACACTTCCTGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS GCA 72 bp CTGCCCGCTACTTCCGCCTGCTGCGCGAGTGACGGATaGGGCCGAGGCTCAAAAGACTCTGTCAGCGTTTCC +
Preference number: 6 (lower is better)
Translates to: LPATSACCASDG*GRGSKDSVSVS
Trigger: GGAAACGCTGACAGAGTCTTTTGAGCCTCGGCCGCATCCGTCACTCGCGCAGCAGGCGGAAGTAGCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CCA 72 bp GGTGAACGCCTCCTTGTCTGGGACAGATGGCTCAGCTaGGCCCAGGGTCCGGCACTGGGGCGTATTCCAAGA +
Preference number: 6 (lower is better)
Translates to: GERLLVWDRWLS*AQGPALGRIPR
Trigger: TCTTGGAATACGCCCCAGTGCCGGACCCTGGGCCCAGCTGAGCCATCTGTCCCAGACAAGGAGGCGTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 72 bp AGGTCAGTCACTCAGAAGTGGACCCGCAGCACGTCTTaGCTAGCAACCGGCCGCTGGCAGGCTGTGCACGTC +
Preference number: 6 (lower is better)
Translates to: RSVTQKWTRSTS*LATGRWQAVHV
Trigger: GACGTGCACAGCCTGCCAGCGGCCGGTTGCTAGCCAAGACGTGCTGCGGGTCCACTTCTGAGTGACTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 72 bp CCCCCTCAGCTCCTCCCAGCAATGGGTCTCCTCCAGTaGAGGTCAGTCACTCAGAAGTGGACCCGCAGCACG +
Preference number: 6 (lower is better)
Translates to: PPQLLPAMGLLQ*RSVTQKWTRST
Trigger: CGTGCTGCGGGTCCACTTCTGAGTGACTGACCTCCACTGGAGGAGACCCATTGCTGGGAGGAGCTGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 72 bp CCTGCAGAGCCACATCCTGAGGCAGGTTCTCTGAGGTaGCCAGCAGGATGCTGTCTATCACTTCCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PAEPHPEAGSLR*PAGCCLSLPGS
Trigger: GCTCCCAGGAAGTGATAGACAGCATCCTGCTGGTCACCTCAGAGAACCTGCCTCAGGATGTGGCTCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 72 bp AGGGTGATGGGATCCAGGAACTCCTCAGGCACATCCTaGATGATCTCGGCCAGCTTCTGCAGGCTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RVMGSRNSSGTS*MISASFCRLEG
Trigger: TCCCTCCAGCCTGCAGAAGCTGGCCGAGATCATTCAGGATGTGCCTGAGGAGTTCCTGGATCCCATCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 72 bp CACTGCGGTTACACTTCTCCAGTGTGCTCTGGTCGATaGCCTTGCCTGAGGGCAGCAGCATGGGACAAGGCA +
Preference number: 6 (lower is better)
Translates to: HCGYTSPVCSGR*PCLRAAAWDKA
Trigger: TGCCTTGTCCCATGCTGCTGCCCTCAGGCAAGGTCATCGACCAGAGCACACTGGAGAAGTGTAACCGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 72 bp TGGAGCCTGCAGAGCCACATCCTGAGGCAGGTTCTCTaGGGTGACCAGCAGGATGCTGTCTATCACTTCCTG +
Preference number: 6 (lower is better)
Translates to: WSLQSHILRQVL*GDQQDAVYHFL
Trigger: CAGGAAGTGATAGACAGCATCCTGCTGGTCACCTCAGAGAACCTGCCTCAGGATGTGGCTCTGCAGGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 72 bp ACACTTCTCCAGTGTGCTCTGGTCGATGACCTTGCCTaGGGGCAGCAGCATGGGACAAGGCATGATCTCCAG +
Preference number: 6 (lower is better)
Translates to: TLLQCALVDDLA*GQQHGTRHDLQ
Trigger: CTGGAGATCATGCCTTGTCCCATGCTGCTGCCCTCAGGCAAGGTCATCGACCAGAGCACACTGGAGAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 72 bp AACAATGGAAGAAGGGATCACTGCCAATGCCGTCTGTaGTCTCCCAAGCAGGTGGCAGCCAGGGATGGAGTG +
Preference number: 6 (lower is better)
Translates to: NNGRRDHCQCRL*SPKQVAARDGV
Trigger: CACTCCATCCCTGGCTGCCACCTGCTTGGGAGAGCACAGACGGCATTGGCAGTGATCCCTTCTTCCATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 72 bp ATACTCTTTTGCAGGAGGCACATTCGGGGCCCAGGATaGTCCCAGGCTGCTCTGTCGAGCAGTCCATATGTG +
Preference number: 6 (lower is better)
Translates to: ILFCRRHIRGPG*SQAALSSSPYV
Trigger: CACATATGGACTGCTCGACAGAGCAGCCTGGGAGCATCCTGGGCCCCGAATGTGCCTCCTGCAAAAGAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CCA 72 bp CTGCAGAGGGAAAACACCTTCCTGGATGGATCGCTCTaGAAGTCATTAAGCAGCTTAGTCCCGGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: LQRENTFLDGSL*KSLSSLVPARW
Trigger: CCACCGCGCCGGGACTAAGCTGCTTAATGACTTCCAGAGCGATCCATCCAGGAAGGTGTTTTCCCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS TCA 72 bp CTGTCTATCACTTCCTGGGAGCAGGTCTTGGCCGGCTaGCCCCACACTTCCAACCGCTTGATACAAGGGATA +
Preference number: 6 (lower is better)
Translates to: LSITSWEQVLAG*PHTSNRLIQGI
Trigger: TATCCCTTGTATCAAGCGGTTGGAAGTGTGGGGTCAGCCGGCCAAGACCTGCTCCCAGGAAGTGATAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS TCA 72 bp GCCAAGGGTGGATGCCAAGGCAATTTCCAAGCTTTGTaGCAGCTTCTGCTCGTGGGACAGTGGACCTGTCGA +
Preference number: 6 (lower is better)
Translates to: AKGGCQGNFQAL*QLLLVGQWTCR
Trigger: TCGACAGGTCCACTGTCCCACGAGCAGAAGCTGTCACAAAGCTTGGAAATTGCCTTGGCATCCACCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CCA 72 bp CCGCCGCCTGTCACATGGGTGATACAGATCCTTAAGTaGGCCACGTGGCTAAGGGAAAGAGCCCCTTTATTC +
Preference number: 6 (lower is better)
Translates to: PPPVTWVIQILK*ATWLRERAPLF
Trigger: GAATAAAGGGGCTCTTTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTATCACCCATGTGACAGGCGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CAA 72 bp TCAGCGTTTCCCAAGGACATTTTCCACTGGAGGACGTaGTTGAGGAGGCAGGGGGAGTCTAGGACCTGCAGA +
Preference number: 6 (lower is better)
Translates to: SAFPKDIFHWRT*LRRQGESRTCR
Trigger: TCTGCAGGTCCTAGACTCCCCCTGCCTCCTCAACAACGTCCTCCAGTGGAAAATGTCCTTGGGAAACGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS TCA 72 bp CCGGCACTGGGGCGTATTCCAAGACACTCTGCTAGATaGGGCAGATGTGTACATTTCCAGGCCAGTGACGTT +
Preference number: 6 (lower is better)
Translates to: PALGRIPRHSAR*GRCVHFQASDV
Trigger: AACGTCACTGGCCTGGAAATGTACACATCTGCCTCATCTAGCAGAGTGTCTTGGAATACGCCCCAGTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 72 bp AACCGCTTGATACAAGGGATACCGCCGCCTGTCACATaGGTGATACAGATCCTTAAGTGGGCCACGTGGCTA +
Preference number: 6 (lower is better)
Translates to: NRLIQGIPPPVT*VIQILKWATWL
Trigger: TAGCCACGTGGCCCACTTAAGGATCTGTATCACCCATGTGACAGGCGGCGGTATCCCTTGTATCAAGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CAA 90 bp CCAGGCTGCTCTGTCGAGCAGTCCATATGTGTCAGGCTGGGCTCATaGGTGGCTTTCATTTTCTTAGCAGTGTGCTCTGAGGTAGTGGGT +
Preference number: 6 (lower is better)
Translates to: PGCSVEQSICVRLGS*VAFIFLAVCSEVVG
Trigger: ACCCACTACCTCAGAGCACACTGCTAAGAAAATGAAAGCCACCAATGAGCCCAGCCTGACACATATGGACTGCTCGACAGAGCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS TCA 72 bp GAGGCAGATGTGTACATTTCCAGGCCAGTGACGTTCTaGCCTCCCCCAGCTGTGAGGTCTATGTTGATCCTA +
Preference number: 6 (lower is better)
Translates to: EADVYISRPVTF*PPPAVRSMLIL
Trigger: TAGGATCAACATAGACCTCACAGCTGGGGGAGGTCAGAACGTCACTGGCCTGGAAATGTACACATCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217173.7
ENST00000348031.6
ENST00000449731.1
CDS TCA 72 bp GGCTCTGGTTTTTCAGTAAGACTTTGCCTACCAAGGTaGACGCCTCCTTGTCTGGGACAGATGGCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GSGFSVRLCLPR*TPPCLGQMAQL
Trigger: CAGCTGAGCCATCTGTCCCAGACAAGGAGGCGTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS GCA 72 bp GATGCCAAGGCAATTTCCAAGCTTTGTGACAGCTTCTaGTCGTGGGACAGTGGACCTGTCGAGCAGTCCATA +
Preference number: 6 (lower is better)
Translates to: DAKAISKLCDSF*SWDSGPVEQSI
Trigger: TATGGACTGCTCGACAGGTCCACTGTCCCACGAGCAGAAGCTGTCACAAAGCTTGGAAATTGCCTTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CCA 72 bp GGCCTGGCCTTGAAGCCCCTGTGGCTAAACACCACTTaGCTCTGGTTTTTCAGTAAGACTTTGCCTACCAAG +
Preference number: 6 (lower is better)
Translates to: GLALKPLWLNTT*LWFFSKTLPTK
Trigger: CTTGGTAGGCAAAGTCTTACTGAAAAACCAGAGCCAAGTGGTGTTTAGCCACAGGGGCTTCAAGGCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 72 bp GTCACATGGGTGATACAGATCCTTAAGTGGGCCACGTaGCTAAGGGAAAGAGCCCCTTTATTCCAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: VTWVIQILKWAT*LRERAPLFQSS
Trigger: GGAGCTCTGGAATAAAGGGGCTCTTTCCCTTAGCCACGTGGCCCACTTAAGGATCTGTATCACCCATGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CAA 90 bp CCCCTGTGGCTAAACACCACTTGGCTCTGGTTTTTCAGTAAGACTTaGCCTACCAAGGTGAACGCCTCCTTGTCTGGGACAGATGGCTCA +
Preference number: 6 (lower is better)
Translates to: PLWLNTTWLWFFSKT*PTKVNASLSGTDGS
Trigger: TGAGCCATCTGTCCCAGACAAGGAGGCGTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAGCCAAGTGGTGTTTAGCCACAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CAA 90 bp GACAGTGGACCTGTCGAGCAGTCCATATGTGTCAGGCTGGGCTCATaGGTGGCTTTCATTTTCTTAGCAGTGTGCTCTGAGGTAGTGGGT +
Preference number: 6 (lower is better)
Translates to: DSGPVEQSICVRLGS*VAFIFLAVCSEVVG
Trigger: ACCCACTACCTCAGAGCACACTGCTAAGAAAATGAAAGCCACCAATGAGCCCAGCCTGACACATATGGACTGCTCGACAGGTCCACTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS CCA 72 bp CCTGCTCTATCTTCCTTTTCTGAGAGGGCAGAACAATaGAAGAAGGGATCACTGCCAATGCCGTCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: PALSSFSERAEQ*KKGSLPMPSVL
Trigger: GAGCACAGACGGCATTGGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTCAGAAAAGGAAGATAGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 72 bp AGTCTAGGACCTGCAGAGGGAAAACACCTTCCTGGATaGATCGCTCTGGAAGTCATTAAGCAGCTTAGTCCC +
Preference number: 6 (lower is better)
Translates to: SLGPAEGKHLPG*IALEVIKQLSP
Trigger: GGGACTAAGCTGCTTAATGACTTCCAGAGCGATCCATCCAGGAAGGTGTTTTCCCTCTGCAGGTCCTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS CAA 72 bp CCTGTCGAGCAGTCCATATGTGTCAGGCTGGGCTCATaGGTGGCTTTCATTTTCTTAGCAGTGTGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: PVEQSICVRLGS*VAFIFLAVCSE
Trigger: CTCAGAGCACACTGCTAAGAAAATGAAAGCCACCAATGAGCCCAGCCTGACACATATGGACTGCTCGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217173.7
CDS TCA 72 bp TCTGGGACATGTTCAGCCTGCTCTATCTTCCTTTTCTaGGAGGGCAGAACAATGGAAGAAGGGATCACTGCC +
Preference number: 6 (lower is better)
Translates to: SGTCSACSIFLF*EGRTMEEGITA
Trigger: GGCAGTGATCCCTTCTTCCATTGTTCTGCCCTCTCAGAAAAGGAAGATAGAGCAGGCTGAACATGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CCA 72 bp GCCTTGAAGCCCCTGTGGCTAAACACCACTTGGCTCTaGTTTTTCAGTAAGACTTTGCCTACCAAGGTGAAC +
Preference number: 6 (lower is better)
Translates to: ALKPLWLNTTWL*FFSKTLPTKVN
Trigger: GTTCACCTTGGTAGGCAAAGTCTTACTGAAAAACCAGAGCCAAGTGGTGTTTAGCCACAGGGGCTTCAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217173.7
ENST00000348031.6
CDS CAA 72 bp TCTGTCGAGCAGTCCATATGTGTCAGGCTGGGCTCATaGGTGGCTTTCATTTTCTTAGCAGTGTGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: SVEQSICVRLGS*VAFIFLAVCSE
Trigger: CTCAGAGCACACTGCTAAGAAAATGAAAGCCACCAATGAGCCCAGCCTGACACATATGGACTGCTCGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348031.6
CDS TCA 72 bp CATCAGCTGATATCTTGTTGCAGTGAATTCTTGGTCTaGACTGTGGGAGGCAAAGATTTATTACCATCTTTG +
Preference number: 6 (lower is better)
Translates to: HQLISCCSEFLV*TVGGKDLLPSL
Trigger: CAAAGATGGTAATAAATCTTTGCCTCCCACAGTTCAGACCAAGAATTCACTGCAACAAGATATCAGCTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217173.7
ENST00000348031.6
ENST00000449731.1
CDS TCA 72 bp ACTGGTGGCTTAATGAAATACTCTGTCCTGAAACCATaGCTTCTCTTTGTGAGATCTTCAGAGATGAGATTT +
Preference number: 6 (lower is better)
Translates to: TGGLMKYSVLKP*LLFVRSSEMRF
Trigger: AAATCTCATCTCTGAAGATCTCACAAAGAGAAGTCATGGTTTCAGGACAGAGTATTTCATTAAGCCACCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217173.7
ENST00000348031.6
ENST00000449731.1
CDS TCA 72 bp TATGTTGATCCTACAGATTTCCACATTAAAGGGAAATaGAACTGTCACATAGACTGGTGGCTTAATGAAATA +
Preference number: 6 (lower is better)
Translates to: YVDPTDFHIKGK*NCHIDWWLNEI
Trigger: TATTTCATTAAGCCACCAGTCTATGTGACAGTTTCATTTCCCTTTAATGTGGAAATCTGTAGGATCAACATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217173.7
ENST00000348031.6
ENST00000449731.1