RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000118900

Ensembl transcript IDs: ENST00000262376.11, ENST00000396658.8, ENST00000585857.1, ENST00000586152.1, ENST00000586716.1, ENST00000587027.1, ENST00000589191.1, ENST00000590769.5, ENST00000592120.5

Found 878 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTaGGAGAGGCGCTGCATGGGGCGGGCTGGAGTGCAAGCCAGCCAG +
Preference number: 1 (lower is better)
Translates to: STWQTLRDMGGHRSV*ERRCMGRAGVQASQ
Trigger: CTGGCTGGCTTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR TCA 90 bp AGTGAGAGCAAGGGGTCAGAGGCACCCTCCAGTTCCCGCAGGCCCTaGGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SESKGSEAPSSSRRP*ASADGTATGLCSSS
Trigger: GGAGGAGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGGGTGCCTCTGACCCCTTGCTCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR GCA 90 bp GCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGAGAGTCCCTaGTCAGCCTCCACTGCCGGCCTCTGCTTGGCTTTGAGCTCAGCA +
Preference number: 1 (lower is better)
Translates to: AWDPGVYGQRSLESP*SASTAGLCLALSSA
Trigger: TGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGTGGAGGCTGAGCAGGGACTCTCCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CCA 90 bp GGCTCTGGCCTGAGTTTTGTCCGCTTTGAGCACACAGCCTGGGGATaGGGCGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: GSGLSFVRFEHTAWG*GGTVTIQGAYCSQK
Trigger: CTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCGCCCCATCCCCAGGCTGTGTGCTCAAAGCGGACAAAACTCAGGCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 90 bp CCAAATGCCAGGGGATCAGGCAGATTCACCCACAGGTGTGCCAACTaGTCTGCCACCAGAGCCTGTAAACACTGTGCCTCCCACCACGGC +
Preference number: 1 (lower is better)
Translates to: PNARGSGRFTHRCAN*SATRACKHCASHHG
Trigger: GCCGTGGTGGGAGGCACAGTGTTTACAGGCTCTGGTGGCAGAGCAGTTGGCACACCTGTGGGTGAATCTGCCTGATCCCCTGGCATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 90 bp CTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGG +
Preference number: 1 (lower is better)
Translates to: LPPWEAHQKCREALR*ELTLLQKNTKQQKG
Trigger: CCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
3UTR TCA 90 bp GCTCCTTGGGAAACCGGGAAGGCCAGCAAACCTCTGAATGAAGGATaGGTTACTGGGCGCTGTACCCTGGGAGTCAGGAGCCAAGAGCGG +
Preference number: 1 (lower is better)
Translates to: APWETGKASKPLNEG*VTGRCTLGVRSQER
Trigger: CCGCTCTTGGCTCCTGACTCCCAGGGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 90 bp AGGTCTTGCTCCTTGGGAAACCGGGAAGGCCAGCAAACCTCTGAATaGAGGATGAGTTACTGGGCGCTGTACCCTGGGAGTCAGGAGCCA +
Preference number: 1 (lower is better)
Translates to: RSCSLGNREGQQTSE*RMSYWALYPGSQEP
Trigger: TGGCTCCTGACTCCCAGGGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 90 bp ACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGA +
Preference number: 1 (lower is better)
Translates to: THAPPEEHQAAERAQ*VYILGDLHVLIPPR
Trigger: TCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR TCA 90 bp ACAGAGGTCTTGCTCCTTGGGAAACCGGGAAGGCCAGCAAACCTCTaGATGAAGGATGAGTTACTGGGCGCTGTACCCTGGGAGTCAGGA +
Preference number: 1 (lower is better)
Translates to: TEVLLLGKPGRPANL*MKDELLGAVPWESG
Trigger: TCCTGACTCCCAGGGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTaGCATGGCTGTTCAGTCATTCGCTCTTTCATTACCACAAATAAA +
Preference number: 1 (lower is better)
Translates to: CSAPPSAAASPVGLP*HGCSVIRSFITTNK
Trigger: TTTATTTGTGGTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 90 bp CCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACGTGCCTaGTCACTTAGCTGGAGCAGTCAGTTCAGACTCACCTTGTGGCAC +
Preference number: 1 (lower is better)
Translates to: PTGVCAEDTVYSQRA*SLSWSSQFRLTLWH
Trigger: GTGCCACAAGGTGAGTCTGAACTGACTGCTCCAGCTAAGTGATCAGGCACGTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 90 bp TGCAGTAACTGTCCTAGTCTCTCTGATCCACTCTCCAAGCTCTTCTaGACATCACCCTTCAGTCGACACATAACCCCACTGCCTGGAGAG +
Preference number: 1 (lower is better)
Translates to: CSNCPSLSDPLSKLF*TSPFSRHITPLPGE
Trigger: CTCTCCAGGCAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGGATCAGAGAGACTAGGACAGTTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 90 bp GGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTGGTTGAGTGGTaGCTTAGGAGCTCTGCAGTAACTGTCCTAGTCTCTCTGATCCAC +
Preference number: 1 (lower is better)
Translates to: GKCPQILVKQPLVEW*LRSSAVTVLVSLIH
Trigger: GTGGATCAGAGAGACTAGGACAGTTACTGCAGAGCTCCTAAGTCACCACTCAACCAGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 90 bp TGCCTAAGAATGATTCCTAAGAATACAAACTGGAATGTCTATCTGTaGCTTGGGACCCCTGGTATCCTTGACCCTCAGAGAGATGAAGGG +
Preference number: 1 (lower is better)
Translates to: CLRMIPKNTNWNVYL*LGTPGILDPQRDEG
Trigger: CCCTTCATCTCTCTGAGGGTCAAGGATACCAGGGGTCCCAAGTCACAGATAGACATTCCAGTTTGTATTCTTAGGAATCATTCTTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR TCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCGATGGGGCGGCACTGTaGCCATCCAGGGAGCTTACT +
Preference number: 2 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGDGAAL*PSRELT
Trigger: AGTAAGCTCCCTGGATGGTCACAGTGCCGCCCCATC...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCACGCGCAATGGTACGTaGGGAGGAGGGAGCACCAAA +
Preference number: 2 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGTRNGT*GGGSTK
Trigger: TTTGGTGCTCCCTCCTCCCCACGTACCATTGCGCGT...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCTCTGCGGGATATGGGTaGGCACCGCAGCGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: QPSSDRAARPRARGSLHLSAGYG*APQRVG
Trigger: TCCCACACGCTGCGGTGCCCACCCATATCCCGCAGA...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR TCA 90 bp GGTATCCTTGACCCTCAGAGAGATGAAGGGCTCTGGGCTCTGCAGTCCACCTCCGCAGTCTGCACCTCCTaGGCAGCAAGGGCCCGGCTC +
Preference number: 2 (lower is better)
Translates to: GILDPQRDEGLWALQSTSAVCTS*AARARL
Trigger: GAGCCGGGCCCTTGCTGCTCAGGAGGTGCAGACTGC...GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCTCTGAGGGTCAAGGATACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCAGACTCTGCGGGATATaGGTGGGCACCGCAGCGTGT +
Preference number: 2 (lower is better)
Translates to: QPSSDRAARPRARGSLHLRLCGI*VGTAAC
Trigger: ACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCT...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR TCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACGGGGGCAGGGCCTGTaGCGATGGCATCCTTGGAGA +
Preference number: 2 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQARGQGL*RWHPWR
Trigger: TCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR CCA 90 bp TCCGTGGTACAGCAGGCCCTTTCCCGTGAAGCTGAGAAGCACCTGGCAGACTCTCTGTGGCCAAGGCCATaGTGGAAGGACCCGGGGGCA +
Preference number: 2 (lower is better)
Translates to: SVVQQALSREAEKHLADSLWPRP*WKDPGA
Trigger: TGCCCCCGGGTCCTTCCACCATGGCCTTGGCCACAG...AGAGTCTGCCAGGTGCTTCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR CCA 90 bp GAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTGGGACCAGCCAGAAGACTGTaGCCAAGGCCATGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: EKHLADSAGYGWAPQRVGPARRL*PRPWWK
Trigger: CTTCCACCATGGCCTTGGCCACAGTCTTCTGGCTGG...TCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR TCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: QPSSDRAARPRARGSLHLETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
3UTR-3UTR TCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAAGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
3UTR-3UTR TCA 90 bp GGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: GRHIRSAEKRSAENSRSSAERAQ*VYILGD
Trigger: GTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGC...GGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR-3UTR TCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCTGGAATGTCTATCTGTaGCTTGGGACCCCTGGTATC +
Preference number: 2 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGWNVYL*LGTPGI
Trigger: GATACCAGGGGTCCCAAGTCACAGATAGACATTCCA...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCCACAGGTGTGCCAACTaGTCTGCCACCAGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTHRCAN*SATRAC
Trigger: ACAGGCTCTGGTGGCAGAGCAGTTGGCACACCTGTG...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCAAGGGCTCTGGGCTCTaGAGTCCACCTCCACGAACT +
Preference number: 2 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTKGSGL*SPPPRT
Trigger: AGTTCGTGGAGGTGGACTGCAGAGCCCAGAGCCCTT...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR TCA 90 bp CAATTTCCGTGGTACAGCAGGCCCTTTCCCGTGAAGCTGAGAAGCACCTGGCAGCGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QFPWYSRPFPVKLRSTWQREALR*ELTLLQ
Trigger: CTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCG...CTGCCAGGTGCTTCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGAAATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR TCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAACGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQREALR*ELTLLQ
Trigger: CTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCG...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR-3UTR TCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACGCCAGAAGGAGCCCCTaGGCAGTGGGGTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNARRSP*AVGCSE
Trigger: CTCAGAGCACCCCACTGCTCAGGGGCTCCTTCTGGC...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGCACCTGGCAGACTCTaGGGGATATGGGTGGGCACC +
Preference number: 2 (lower is better)
Translates to: QKNTKQQKGRSECTSWETAPGRL*GIWVGT
Trigger: GGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR CCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCCATAACCCCACTGCCTaGAGAGCCCCAGGACTTCAA +
Preference number: 2 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCHNPTA*RAPGLQ
Trigger: TTGAAGTCCTGGGGCTCTCCAGGCAGTGGGGTTATG...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CAA 90 bp GGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTaGCCTCTGAAGCGGTCACAATTTCCGTGGTACAGCAGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: GDLHVLIPPRPKWQA*PLKRSQFPWYSRPF
Trigger: AAAGGGCCTGCTGTACCACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR TCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 2 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR-3UTR TCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: QKNTKQQKGRSECTSWETAERAQ*VYILGD
Trigger: GTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR-3UTR TCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCAGGCCAGCAAACCTCTaGATGAAGGATGAGTTACTG +
Preference number: 2 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTRPANL*MKDELL
Trigger: CAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCT...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGGTACTCTGACCAAATaGCAGGGGATCAGGCAGATT +
Preference number: 2 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWGTLTK*QGIRQI
Trigger: AATCTGCCTGATCCCCTGGCATTTGGTCAGAGTACC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACACCACCCAGACCCAAGTaGCAAGCCTTGCCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTPPRPK*QALPLK
Trigger: CTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGG...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR-3UTR TCA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCGAGTTTTGTCCGCTTTaGGCACACAGCCTGGGGATG +
Preference number: 2 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGEFCPL*AHSLGM
Trigger: CATCCCCAGGCTGTGTGCTCAAAGCGGACAAAACTC...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR TCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGTCATCTTCAGACTCTaGTGCTTGTCTAAACTGCAG +
Preference number: 2 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYVIFRL*CLSKLQ
Trigger: CTGCAGTTTAGACAAGCATCAGAGTCTGAAGATGAC...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR-3UTR GCA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTGATGCTTGTCTAAACTaGAGGGTTCCCGAGTTAATG +
Preference number: 2 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPDACLN*RVPELM
Trigger: CATTAACTCGGGAACCCTGCAGTTTAGACAAGCATC...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR-3UTR CCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCACCCAGACCCAAGTaGCAAGCCTTGCCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHPPRPK*QALPLK
Trigger: CTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGG...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR-3UTR CCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCTCTGGAAAAACAAAATaGGAGCCCTGGCTATACTGG +
Preference number: 2 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTSGKTK*EPWLYW
Trigger: CCAGTATAGCCAGGGCTCCCATTTTGTTTTTCCAGA...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCCACAAGACAGGCAAGTaGCCTCAAATCCTTGTGAAA +
Preference number: 2 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCHKTGK*PQILVK
Trigger: TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTG...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCCTTCTTTGGCTCTTTTaGTACTACCTAAGACTACTC +
Preference number: 2 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTLLWLF*YYLRLL
Trigger: GAGTAGTCTTAGGTAGTAGCAAAAGAGCCAAAGAAG...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR TCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACCCACTGGTTGAGTGGTaGCTTAGGAGCTCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: LACRSALPWLFSHSLFHYPLVEW*LRSSAV
Trigger: TACTGCAGAGCTCCTAAGTCACCACTCAACCAGTGG...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGGTCTCCCAGCTGTaGCTCTGGCCTGAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKQVSQL*LWPEFC
Trigger: ACAAAACTCAGGCCAGAGCCACAGCTGGGAGACCTG...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAAGAGCCCTGGCTATACTaGGACTTGGAATTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKEPWLY*DLEFGG
Trigger: GCCCCCAAATTCCAAGTCCCAGTATAGCCAGGGCTC...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATCGGCTTTGGAAAACTTaGACTTTTTCGATTTCTTCT +
Preference number: 2 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYRLWKT*TFSISS
Trigger: AGAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCG...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR-3UTR GCA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGATCCAGGGAGCTTACTaGAGCCAGAAGGAGCCCCTG +
Preference number: 2 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVIQGAY*SQKEPL
Trigger: CAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGAT...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR GCA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCTCCACTGCCGGCCTCTaGTTGGCTTTGAGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: IALYKINNLHTTPNTNIVSTAGL*LALSSA
Trigger: TGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGTGGA...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR TCA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCAGCAGTGGGGTGCTCTaGGGTACTCTGACCAAATGC +
Preference number: 2 (lower is better)
Translates to: IALYKINNLHTTPNTNIVSSGVL*GTLTKC
Trigger: GCATTTGGTCAGAGTACCTCAGAGCACCCCACTGCT...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp GATATGGGTGGGCACCGCAGCGTGTGGGAGAGGCGCTaGATGGGGCGGGCTGGAGTGCAAGCCAGCCAGAAG +
Preference number: 3 (lower is better)
Translates to: DMGGHRSVWERR*MGRAGVQASQK
Trigger: CTTCTGGCTGGCTTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR CCA 72 bp CAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTaGGAGAGGCGCTGCATGGGGCGGGCTGGAGTGCAA +
Preference number: 3 (lower is better)
Translates to: QTLRDMGGHRSV*ERRCMGRAGVQ
Trigger: TTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR CCA 72 bp GGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTaGAGAGTCCCTGCTCAGCCTCCACTGCCGGCCTCT +
Preference number: 3 (lower is better)
Translates to: GPGTRVFMGREA*RVPAQPPLPAS
Trigger: AGAGGCCGGCAGTGGAGGCTGAGCAGGGACTCTCCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CCA 72 bp GCTGAGAAGCACCTGGCAGACTCTGCGGGATATGGGTaGGCACCGCAGCGTGTGGGAGAGGCGCTGCATGGG +
Preference number: 3 (lower is better)
Translates to: AEKHLADSAGYG*APQRVGEALHG
Trigger: CCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR TCA 72 bp AAGGGGTCAGAGGCACCCTCCAGTTCCCGCAGGCCCTaGGCTTCCGCTGATGGGACCGCAACAGGCTTATGC +
Preference number: 3 (lower is better)
Translates to: KGSEAPSSSRRP*ASADGTATGLC
Trigger: GCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGGGTGCCTCTGACCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR TCA 72 bp GCTTTGAGCACACAGCCTGGGGATGGGGCGGCACTGTaGCCATCCAGGGAGCTTACTGCAGCCAGAAGGAGC +
Preference number: 3 (lower is better)
Translates to: ALSTQPGDGAAL*PSRELTAARRS
Trigger: GCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCGCCCCATCCCCAGGCTGTGTGCTCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp AGAGCAGAGGCCGGGCCAAAGGGCGGACAGAGGTCTTaGTCCTTGGGAAACCGGGAAGGCCAGCAAACCTCT +
Preference number: 3 (lower is better)
Translates to: RAEAGPKGGQRS*SLGNREGQQTS
Trigger: AGAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCCCTTTGGCCCGGCCTCTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp CCGGGTGTTTATGGGCAGAGAAGCCTGGAGAGTCCCTaGTCAGCCTCCACTGCCGGCCTCTGCTTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: PGVYGQRSLESP*SASTAGLCLAL
Trigger: CAAAGCCAAGCAGAGGCCGGCAGTGGAGGCTGAGCAGGGACTCTCCAGGCTTCTCTGCCCATAAACACCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CAA 90 bp GAAGCTGAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTGACGATGGCATCCTaGGAGACCCCTGCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: EAEKHLADSAGYGWAPQRVTMAS*ETPALA
Trigger: TGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCAC...ACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR-3UTR CAA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTTTCTCCTTACTGGCATaGAGGGCTGTGAAGCCGGCT +
Preference number: 3 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPFSLLA*RAVKPA
Trigger: AGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAA...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR CCA 72 bp AGGCCGGGCCAAAGGGCGGACAGAGGTCTTGCTCCTTaGGAAACCGGGAAGGCCAGCAAACCTCTGAATGAA +
Preference number: 3 (lower is better)
Translates to: RPGQRADRGLAP*ETGKASKPLNE
Trigger: TTCATTCAGAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCCCTTTGGCCCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 72 bp CGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGTGGCAAGCCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: RSECTSWETCTF*FHPDPSGKPCL
Trigger: GAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR TCA 72 bp TGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAGAAGAACACCAAGCAG +
Preference number: 3 (lower is better)
Translates to: WEAHQKCREALR*ELTLLQKNTKQ
Trigger: CTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR GCA 72 bp AGGGGATCAGGCAGATTCACCCACAGGTGTGCCAACTaGTCTGCCACCAGAGCCTGTAAACACTGTGCCTCC +
Preference number: 3 (lower is better)
Translates to: RGSGRFTHRCAN*SATRACKHCAS
Trigger: GGAGGCACAGTGTTTACAGGCTCTGGTGGCAGAGCAGTTGGCACACCTGTGGGTGAATCTGCCTGATCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp CCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTaGCATGGCTGTTCAGTCATTCGCTCTTTCATTACC +
Preference number: 3 (lower is better)
Translates to: PPSAAASPVGLP*HGCSVIRSFIT
Trigger: GGTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR-3UTR CAA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTGTGAAGCCGGCTTaGGAAAACTTGGACTTTTTC +
Preference number: 3 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYAVKPA*ENLDFF
Trigger: GAAAAAGTCCAAGTTTTCCAAAGCCGGCTTCACAGC...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR TCA 72 bp GAAACCGGGAAGGCCAGCAAACCTCTGAATGAAGGATaGGTTACTGGGCGCTGTACCCTGGGAGTCAGGAGC +
Preference number: 3 (lower is better)
Translates to: ETGKASKPLNEG*VTGRCTLGVRS
Trigger: GCTCCTGACTCCCAGGGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCTTCCCGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 72 bp CTGGAGCAAGTCGTTGTCAGAAGTAGAGCCAAAGAGTaGGAGCAAGGGGTCAGAGGCACCCTCCAGTTCCCG +
Preference number: 3 (lower is better)
Translates to: LEQVVVRSRAKE*EQGVRGTLQFP
Trigger: CGGGAACTGGAGGGTGCCTCTGACCCCTTGCTCTCACTCTTTGGCTCTACTTCTGACAACGACTTGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
3UTR CCA 72 bp TGGCAAGCCTTGCCTCTGAAGCGGTCACAATTTCCGTaGTACAGCAGGCCCTTTCCCGTGAAGCTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: WQALPLKRSQFP*YSRPFPVKLRS
Trigger: GCTTCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
3UTR TCA 72 bp TCCTTGGGAAACCGGGAAGGCCAGCAAACCTCTGAATaGAGGATGAGTTACTGGGCGCTGTACCCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: SLGNREGQQTSE*RMSYWALYPGS
Trigger: ACTCCCAGGGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp CTGGAGAGTCCCTGCTCAGCCTCCACTGCCGGCCTCTaGTTGGCTTTGAGCTCAGCAATACAAATCTCTTCT +
Preference number: 3 (lower is better)
Translates to: LESPCSASTAGL*LALSSAIQISS
Trigger: AGAAGAGATTTGTATTGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGTGGAGGCTGAGCAGGGACTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 72 bp CCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGACCTGCACGTTCTGATT +
Preference number: 3 (lower is better)
Translates to: PPEEHQAAERAQ*VYILGDLHVLI
Trigger: AATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
3UTR TCA 72 bp GCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCTaGGGACACCGTATACTCTCAACGTGCCTGATCACT +
Preference number: 3 (lower is better)
Translates to: AKSGPFSHRCMC*GHRILSTCLIT
Trigger: AGTGATCAGGCACGTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CCA 72 bp CTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATaGCTGTTCAGTCATTCGCTCTTTCATTACCACAAA +
Preference number: 3 (lower is better)
Translates to: LCCGLACRSALP*LFSHSLFHYHK
Trigger: TTTGTGGTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CCA 72 bp TCACTTAGCTGGAGCAGTCAGTTCAGACTCACCTTGTaGCACAGACCTCACAAGACAGGCAAGTGCCCTCAA +
Preference number: 3 (lower is better)
Translates to: SLSWSSQFRLTL*HRPHKTGKCPQ
Trigger: TTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGTGAGTCTGAACTGACTGCTCCAGCTAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 72 bp GTATGTGCTGAGGACACCGTATACTCTCAACGTGCCTaGTCACTTAGCTGGAGCAGTCAGTTCAGACTCACC +
Preference number: 3 (lower is better)
Translates to: VCAEDTVYSQRA*SLSWSSQFRLT
Trigger: GGTGAGTCTGAACTGACTGCTCCAGCTAAGTGATCAGGCACGTTGAGAGTATACGGTGTCCTCAGCACATAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp TGTCCTAGTCTCTCTGATCCACTCTCCAAGCTCTTCTaGACATCACCCTTCAGTCGACACATAACCCCACTG +
Preference number: 3 (lower is better)
Translates to: CPSLSDPLSKLF*TSPFSRHITPL
Trigger: CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGGATCAGAGAGACTAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CCA 72 bp CTGCAGTCCACCTCCACGAACTCTGGAAAAACAAAATaGGAGCCCTGGCTATACTGGGACTTGGAATTTGGG +
Preference number: 3 (lower is better)
Translates to: LQSTSTNSGKTK*EPWLYWDLEFG
Trigger: CCCAAATTCCAAGTCCCAGTATAGCCAGGGCTCCCATTTTGTTTTTCCAGAGTTCGTGGAGGTGGACTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR TCA 72 bp CCTCAAATCCTTGTGAAACAGCCACTGGTTGAGTGGTaGCTTAGGAGCTCTGCAGTAACTGTCCTAGTCTCT +
Preference number: 3 (lower is better)
Translates to: PQILVKQPLVEW*LRSSAVTVLVS
Trigger: AGAGACTAGGACAGTTACTGCAGAGCTCCTAAGTCACCACTCAACCAGTGGCTGTTTCACAAGGATTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR GCA 72 bp CGGCAGACACTTCACAGAGGCCTGCTTCTGCCGCACTaGCTAAGAATGATTCCTAAGAATACAAACTGGAAT +
Preference number: 3 (lower is better)
Translates to: RQTLHRGLLLPH*LRMIPKNTNWN
Trigger: ATTCCAGTTTGTATTCTTAGGAATCATTCTTAGGCAGTGCGGCAGAAGCAGGCCTCTGTGAAGTGTCTGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CCA 72 bp AAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATaGACATGTGTTGTCGAATTCTGCTCCACCATAAAG +
Preference number: 3 (lower is better)
Translates to: KGLRLRSIQRAE*TCVVEFCSTIK
Trigger: CTTTATGGTGGAGCAGAATTCGACAACACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCGTAGCTCACTGGCGCTaGGACGGGGCCGACCAGCGC +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGVAHWR*DGADQR
Trigger: GCGCTGGTCGGCCCCGTCGCAGCGCCAGTGAGCTAC...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCTTGGGACGGGTCGGCTaGTGGCCTGTCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGLGRVG*WPVPRR
Trigger: CCTCCGTGGGACAGGCCACCAGCCGACCCGTCCCAA...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCGGGAGAGGCGCTGCATaGGGCGGGCTGGAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGGRGAA*GGLECK
Trigger: CTTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCC...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCGCTGGTGCAGAGGGATaGAAGCCCTGGCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGAGAEG*KPWPLA
Trigger: GGCCAAAGGCCAGGGCTTCCATCCCTCTGCACCAGC...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGGACGGGTCGGCTGGTaGCCTGTCCCACGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAGRVGW*PVPRRE
Trigger: CTCCCTCCGTGGGACAGGCCACCAGCCGACCCGTCC...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGGGCACCGCAGCGTGTaGGAGAGGCGCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAGHRSV*ERRCMG
Trigger: CCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCC...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR TCA 90 bp CTGAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTGGCGGGGGCAGGGCCTGTaGCGATGGCATCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRSTWQTLRDMGGHRSVWRGQGL*RWHPWR
Trigger: TCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCG...CCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR TCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGCAGTCTGCACCTCCTaGGCAGCAAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAAVCTS*AARARL
Trigger: GAGCCGGGCCCTTGCTGCTCAGGAGGTGCAGACTGC...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCAGCAAGGCCGCCCGATaGCTGGGATGGGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLSKAAR*LGWELP
Trigger: AGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCT...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGACGGAGGGAGGCTGTATaGCAGGGACCAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRRREAV*QGPGSQ
Trigger: CTGGGAGCCTGGTCCCTGGCATACAGCCTCCCTCCG...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGTGGCCAAGGCCATaGTGGAAGGACCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLLWPRP*WKDPGA
Trigger: TGCCCCCGGGTCCTTCCACCATGGCCTTGGCCACAG...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR TCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCAGACCCGGCGGAGGCTaGGTTCCAGGCCGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFRPGGG*VPGRAE
Trigger: CTCGGCGCGGCCTGGAACTCAGCCTCCGCCGGGTCT...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR TCA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTAGTTCCCGCAGGCCCTaGGCTTCCGCTGATGGGACC +
Preference number: 4 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPSSRRP*ASADGT
Trigger: GGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACT...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR TCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGACGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRREALR*ELTLLQ
Trigger: CTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCG...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCGGGGCCTCCCGGCCTaGGGCCAAGCAGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERRGLPA*GQAELP
Trigger: CGGCAACTCTGCTTGGCCGCAGGCCGGGAGGCCCCG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR GCA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTCAGAGCGGACCTGACTaGTCAGCTCCCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRAQSGPD*SAPESA
Trigger: CGCAGACTCGGGAGCTGAGCAGTCAGGTCCGCTCTG...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCTCTTGTGAGAGCTGCTaGTGGAGGCTGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGSCESC*WRLTGL
Trigger: GAGGCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGA...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCACGGAGGGAGGCTGTATaGCAGGGACCAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGARREAV*QGPGSQ
Trigger: CTGGGAGCCTGGTCCCTGGCATACAGCCTCCCTCCG...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGCCCGATGCCTGGGATaGGAGCTCCCTGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPARCLG*ELPARG
Trigger: GCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGC...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAAGGCCGCCCGATGCCTaGGATGGGAGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPRPPDA*DGSSLL
Trigger: GAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCT...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTGCTGGTGCAGAGGGATaGAAGCCCTGGCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRAAGAEG*KPWPLA
Trigger: GGCCAAAGGCCAGGGCTTCCATCCCTCTGCACCAGC...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCATTGGGACGGGTCGGCTaGTGGCCTGTCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPLGRVG*WPVPRR
Trigger: CCTCCGTGGGACAGGCCACCAGCCGACCCGTCCCAA...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAGGGCACCGCAGCGTGTaGGAGAGGCGCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRGHRSV*ERRCMG
Trigger: CCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCC...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCATGGGCAGAGAAGCCTaGAGAGTCCCTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGMGREA*RVPAQP
Trigger: AGGCTGAGCAGGGACTCTCCAGGCTTCTCTGCCCAT...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CAA 72 bp CAGAGCAGAGGCCGGGCCAAAGGGCGGACAGAGGTCTaGCTCCTTGGGAAACCGGGAAGGCCAGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: QSRGRAKGRTEV*LLGKPGRPANL
Trigger: GAGGTTTGCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCCCTTTGGCCCGGCCTCTGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCGCCGGCTCACAGTCCTaGTGCTGTTCTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTAGSQS*CCSPAP
Trigger: TGGGGCAGGAGAACAGCATCAGGACTGTGAGCCGGC...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGTTCCCGCAGGCCCTaGGCTTCCGCTGATGGGACC +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSSSRRP*ASADGT
Trigger: GGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACT...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGCAGCTCTGGCAGCCTaGGCCAGCTCCTTAACGCGC +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWAALAA*ASSLTR
Trigger: GCGCGTTAAGGAGCTGGCTCAGGCTGCCAGAGCTGC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGCCACTTGGGGCCCGTaGGACGTCCGTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAATWGP*DVRGKL
Trigger: CAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCACGGGGGCAGGGCCTGTaGCGATGGCATCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPRGQGL*RWHPWR
Trigger: TCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCG...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGCAGTCTGCACCTCCTaGGCAGCAAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEAVCTS*AARARL
Trigger: GAGCCGGGCCCTTGCTGCTCAGGAGGTGCAGACTGC...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCTGTAATCCGAACAGCTaGTGCAGCCGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGCNPNS*CSRLTV
Trigger: GACTGTGAGCCGGCTGCAGCAGCTGTTCGGATTACA...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAGCGCTTCTCCAGGGGTaGTGGCAGGCCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRALLQG*WQAFGE
Trigger: CTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGC...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCATCCTTGGAGACCCCTaGTTTGGCAGAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGILGDP*FGRGVS
Trigger: GCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGAT...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCGCACCTGGCAGACTCTaGGGGATATGGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: GRHIRSAEKRSAENSRSSAPGRL*GIWVGT
Trigger: GGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGC...GGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAAGTGAACTGGACCCTGTaGGGCTCCGACATGGCTACC +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQVNWTL*GSDMAT
Trigger: GGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCAC...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCGAGTCCATGGCAGTaGCCGCCTGGAGCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYASPWQ*PPGASR
Trigger: ACGACTTGCTCCAGGCGGCCACTGCCATGGACTCGC...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCCAGAGAGCTAGCTGGTaGTGGAGCAGAAGGACTAGG +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGQRASW*WSRRTR
Trigger: CCTAGTCCTTCTGCTCCACCACCAGCTAGCTCTCTG...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCCCCGTGAGACGTCCGTaGCAAGCTGTGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSPVRRP*QAVVLS
Trigger: GCTAAGCACCACAGCTTGCCACGGACGTCTCACGGG...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAGGACGGGTCGGCTGGTaGCCTGTCCCACGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPGRVGW*PVPRRE
Trigger: CTCCCTCCGTGGGACAGGCCACCAGCCGACCCGTCC...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCCCTGGGTCCCACCACTaGAATCTCCGTTTGGACCGC +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSPGSHH*NLRLDR
Trigger: GCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGG...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGGGAGAGGCGCTGCATaGGGCGGGCTGGAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAGRGAA*GGLECK
Trigger: CTTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAGGAGCCCCTGAGCAGCAGCTGCACGCGCAATaGTACGTGGGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RHCDHPGSLLQPEGAPEQQLHAQ*YVGRRE
Trigger: CTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTG...CTGCTCAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTCCCCCTCAGCAGCTCTaGCAGCTGAGCAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPPPQQL*QLSRCS
Trigger: GGAGCATCTGCTCAGCTGCCAGAGCTGCTGAGGGGG...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR TCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGTTCCCGCAGGCCCTaGGCTTCCGCTGATGGGACC +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRSSRRP*ASADGT
Trigger: GGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACT...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAACCCCAGAGCGGACCTaGCTGCTCAGCTCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPETPERT*LLSSRV
Trigger: GACTCGGGAGCTGAGCAGTCAGGTCCGCTCTGGGGT...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACCCCAGAGCGGACCTaGCTGCTCAGCTCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSTPERT*LLSSRV
Trigger: GACTCGGGAGCTGAGCAGTCAGGTCCGCTCTGGGGT...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAGCCACTTGGGGCCCGTaGGACGTCCGTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPATWGP*DVRGKL
Trigger: CAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGC...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGACGGGGGCAGGGCCTGTaGCGATGGCATCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRRGQGL*RWHPWR
Trigger: TCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCG...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCACGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPREALR*ELTLLQ
Trigger: CTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCG...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCGCAGTCTGCACCTCCTaGGCAGCAAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFAVCTS*AARARL
Trigger: GAGCCGGGCCCTTGCTGCTCAGGAGGTGCAGACTGC...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR TCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAGCCAGAAGGAGCCCCTaGGCAGTGGGGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRARRSP*AVGCSE
Trigger: CTCAGAGCACCCCACTGCTCAGGGGCTCCTTCTGGC...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTGCCAGAAGGAGCCCCTaGGCAGTGGGGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASARRSP*AVGCSE
Trigger: CTCAGAGCACCCCACTGCTCAGGGGCTCCTTCTGGC...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAAACTGGCCCCCACAGTaGGCACACCCTAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRNWPPQ*AHPRCS
Trigger: AGAACACCTAGGGTGTGCTCACTGTGGGGGCCAGTT...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAGCGCTTCTCCAGGGGTaGTGGCAGGCCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPALLQG*WQAFGE
Trigger: CTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGC...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCTTCTCCAGGGGTaGTGGCAGGCCTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERALLQG*WQAFGE
Trigger: CTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGC...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCTGGTACTTGGCCATCTaGTCTGGCATCGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSWYLAI*SGIALP
Trigger: TGGCAGGGCGATGCCAGAGCAGATGGCCAAGTACCA...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCGGGATGGGAGCTCCCTaGTCGAGGCCCCAATACTCA +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTGMGAP*SRPQYS
Trigger: TGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCC...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCCCGAGGAGGCTGGATTaGGGATCAAGTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGPRRLD*GSSLHP
Trigger: TGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGG...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGCCAGGCACAGGAACTaGCACTTGGGGCCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPARHRN*HLGPVR
Trigger: TCTCACGGGCCCCAAGTGGCAGTTCCTGTGCCTGGC...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCTCTTGTGAGAGCTGCTaGTGGAGGCTGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSSCESC*WRLTGL
Trigger: GAGGCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGA...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTCGGAGGGAGGCTGTATaGCAGGGACCAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASRREAV*QGPGSQ
Trigger: CTGGGAGCCTGGTCCCTGGCATACAGCCTCCCTCCG...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGTGTGGGAGAGGCGCTaGATGGGGCGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSVWERR*MGRAGV
Trigger: CACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACAC...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGCACCTGGCAGACTCTaGGGGATATGGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWAPGRL*GIWVGT
Trigger: GGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCTCTGCCCCACCCTCTaGTGCGGCCTCGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERLCPTL*CGLACR
Trigger: CCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAGTCACGCCCGGTAAGTaGTCAGAGACTTTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRVTPGK*SETFAA
Trigger: CGCAGCGAAAGTCTCTGAGCACTTACCGGGCGTGAC...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGTCGGCTGCTAAGCCGTaGCTCCCAGCGGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLSAAKP*LPAGGR
Trigger: CCGCCCGCCCGCTGGGAGCCACGGCTTAGCAGCCGA...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGAGGCCGCCCGATGCCTaGGATGGGAGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERRPPDA*DGSSLL
Trigger: GAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCT...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCGCTGGTGCAGAGGGATaGAAGCCCTGGCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSAGAEG*KPWPLA
Trigger: GGCCAAAGGCCAGGGCTTCCATCCCTCTGCACCAGC...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGGGACGGGTCGGCTGGTaGCCTGTCCCACGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGGRVGW*PVPRRE
Trigger: CTCCCTCCGTGGGACAGGCCACCAGCCGACCCGTCC...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCACCTGGGTCCCACCACTaGAATCTCCGTTTGGACCGC +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAPGSHH*NLRLDR
Trigger: GCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGG...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCAGGAGTTCGAGCTCATaGCCCCAGACAGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLRSSSS*PQTALG
Trigger: GCCCAAAGCTGTCTGGGGCCATGAGCTCGAACTCCT...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAACTGTGGCCAAGGCCATaGTGGAAGGACCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPELWPRP*WKDPGA
Trigger: TGCCCCCGGGTCCTTCCACCATGGCCTTGGCCACAG...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CAATTTCCGTGGTACAGCAGGCCCTTTCCCGTGAAGCTGAGAAGCACCTGGCAGGGGAGAGGCGCTGCATaGGGCGGGCTGGAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: QFPWYSRPFPVKLRSTWQGRGAA*GGLECK
Trigger: CTTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCC...CTGCCAGGTGCTTCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGAAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGGGCACCGCAGCGTGTaGGAGAGGCGCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQGHRSV*ERRCMG
Trigger: CCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCC...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTAGAGGTCTTGCTCCTTaGGAAACCGGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRARGLAP*ETGKAS
Trigger: GCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCTCT...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCAAAGGAAGGAGGGCCTaGGACCCGGGTGTTTATGGG +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLKGRRA*DPGVYG
Trigger: CCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTT...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAGCCCTGAGCTTCCGCTaGTGGGACCGCAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRALSFR*WDRNRL
Trigger: AAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGC...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGACCCCAGAGCGGACCTaGCTGCTCAGCTCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERTPERT*LLSSRV
Trigger: GACTCGGGAGCTGAGCAGTCAGGTCCGCTCTGGGGT...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAAGCTGCAGGGCAGGAATaGCGCAAGATAGGCATACAC +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQAAGQE*RKIGIH
Trigger: GTGTATGCCTATCTTGCGTCATTCCTGCCCTGCAGC...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAACTGGCAGGCCCTTATTaGGGGGAGCCTGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPELAGPY*GEPGRT
Trigger: TGTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAG...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCGCCACTTGGGGCCCGTaGGACGTCCGTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCATWGP*DVRGKL
Trigger: CAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGC...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ATGGGGCGGGCTGGAGTGCAAGCCAGCCAGAAGACTGTGGCCAAGGCCATGGTGGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: MGRAGVQASQKTVAKAMVETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...CACCATGGCCTTGGCCACAGTCTTCTGGCTGGCTTGCACTCCAGCCCGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR GCA 90 bp GGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAATCCGAACAGCTGCTaGAGCCGGCTCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GRHIRSAEKRSAENSRSSNPNSC*SRLTVL
Trigger: CAGGACTGTGAGCCGGCTGCAGCAGCTGTTCGGATT...GGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCTGGTACTTGGCCATCTaGTCTGGCATCGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRHIRSAEKRSAENSRSSWYLAI*SGIALP
Trigger: TGGCAGGGCGATGCCAGAGCAGATGGCCAAGTACCA...GGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCATCTTGGCAACCTTTaGCTGCGTGTGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLHLGNL*LRVCLA
Trigger: TGCCAGGCACACACGCAGGCAAAGGTTGCCAAGATG...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCCAAATCCGGTCCCTCTaGTCCTTGTCTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGQIRSL*SLSFSS
Trigger: AGAGGAGAAAGACAAGGAGCAGAGGGACCGGATTTG...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAGCAAGGCCGCCCGATaGCTGGGATGGGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRSKAAR*LGWELP
Trigger: AGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCT...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGCCAGGCACAGGAACTaGCACTTGGGGCCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAARHRN*HLGPVR
Trigger: TCTCACGGGCCCCAAGTGGCAGTTCCTGTGCCTGGC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTGAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTGGATCCTTGGAGACCCCTaGTTTGGCAGAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRSTWQTLRDMGGHRSVWILGDP*FGRGVS
Trigger: GCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGAT...CCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGTGTGGGAGAGGCGCTaGATGGGGCGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETVWERR*MGRAGV
Trigger: CACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACAC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAATCCAGGGAGCTTACTaGAGCCAGAAGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAIQGAY*SQKEPL
Trigger: CAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGAT...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCGGCGGACAGAGGTCTTaGTCCTTGGGAAACCGGGAA +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTGGQRS*SLGNRE
Trigger: TTCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCC...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAGCCTGGAGAGTCCCTaGTCAGCCTCCACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRSLESP*SASTAG
Trigger: GCCGGCAGTGGAGGCTGAGCAGGGACTCTCCAGGCT...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGTCAGGGTAGCTCACTaGCGCTGCGACGGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEVRVAH*RCDGAD
Trigger: GTCGGCCCCGTCGCAGCGCCAGTGAGCTACCCTGAC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CCA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCTGGGTAGAAGAACTCTaGGCAGCGTTTGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGWVEEL*AAFVIW
Trigger: CCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCA...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCGCGAGTCCATGGCAGTaGCCGCCTGGAGCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTASPWQ*PPGASR
Trigger: ACGACTTGCTCCAGGCGGCCACTGCCATGGACTCGC...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACTTCTCCAGGGGTGCTaGCAGGCCTTCGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQALLQGC*QAFGER
Trigger: TCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAAGAAGTCAGGTGCCCATaGCCTCGTCTGCTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQEVRCP*PRLLSL
Trigger: TAAGGAGAGCAGACGAGGCCATGGGCACCTGACTTC...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTAGGCCGCCCGATGCCTaGGATGGGAGCTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSRPPDA*DGSSLL
Trigger: GAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCT...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACCCCGTGAGACGTCCGTaGCAAGCTGTGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PSMGGTSEVPRSAPLRTHPVRRP*QAVVLS
Trigger: GCTAAGCACCACAGCTTGCCACGGACGTCTCACGGG...GTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CAGCAAGGGCCCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTGTGGGAGAAGCCTTTaGGCCTTGGAGCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: QQGPGSLHGRHIRSAEKRCGRSL*ALELIG
Trigger: GCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACA...GCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGCCCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCGGAAGCCCTGGCCTTTaGCCGCTGTCTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSGSPGL*PLSSLT
Trigger: AGTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCC...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGTTGGGACGGGTCGGCTaGTGGCCTGTCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWLGRVG*WPVPRR
Trigger: CCTCCGTGGGACAGGCCACCAGCCGACCCGTCCCAA...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAGGAGCCCCTGAGCAGTCCGTTTGGACCGCCTaGAGGGGCTACCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: RHCDHPGSLLQPEGAPEQSVWTA*RGYQSQ
Trigger: TTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGA...CTGCTCAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAAGCTGAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTACTGGAATCTCCGTTTaGACCGCCTGGAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: EAEKHLADSAGYGWAPQRTGISV*TAWRGY
Trigger: GTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGT...ACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp TCCGTGGTACAGCAGGCCCTTTCCCGTGAAGCTGAGAAGCACCTGGCAGACTCTCTGCATGGGGCGGGCTaGAGTGCAAGCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SVVQQALSREAEKHLADSLHGAG*SASQPE
Trigger: TTCTGGCTGGCTTGCACTCCAGCCCGCCCCATGCAG...AGAGTCTGCCAGGTGCTTCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAACGGTCACAATTTCCGTaGTACAGCAGGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQRSQFP*YSRPFP
Trigger: GGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCG...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp GCCTTGCCTCTGAAGCGGTCACAATTTCCGTGGTACAGCAGGCCCTTTCCCGTGGCCCGGCTCCCTCCATaGGAGGCACATCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: ALPLKRSQFPWYSRPFPVARLPP*EAHQKC
Trigger: GCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGC...CACGGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCGCTTCAGAGGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGGAGCCCCTGAGCAGTaGGGTGCTCTGAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWGAPEQ*GALRYS
Trigger: AGAGTACCTCAGAGCACCCCACTGCTCAGGGGCTCC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCACGCGCAATGGTACGTaGGGAGGAGGGAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTTRNGT*GGGSTK
Trigger: TTTGGTGCTCCCTCCTCCCCACGTACCATTGCGCGT...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTCAGCTGCACGCGCAATaGTACGTGGGGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASQLHAQ*YVGRRE
Trigger: CTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTG...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAAGCTGAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTTGGAGACCCCTGCTTTaGCAGAGGAGTCAGCGTGAC +
Preference number: 4 (lower is better)
Translates to: EAEKHLADSAGYGWAPQRWRPLL*QRSQRD
Trigger: GTCACGCTGACTCCTCTGCCAAAGCAGGGGTCTCCA...ACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR TCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCGCCGGCTCACAGTCCTaGTGCTGTTCTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFAGSQS*CCSPAP
Trigger: TGGGGCAGGAGAACAGCATCAGGACTGTGAGCCGGC...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTGCCCTGAGCTTCCGCTaGTGGGACCGCAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARALSFR*WDRNRL
Trigger: AAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGC...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCAGTTCCCGCAGGCCCTaGGCTTCCGCTGATGGGACC +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTSSRRP*ASADGT
Trigger: GGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACT...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGCAGCTCTGGCAGCCTaGGCCAGCTCCTTAACGCGC +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSAALAA*ASSLTR
Trigger: GCGCGTTAAGGAGCTGGCTCAGGCTGCCAGAGCTGC...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCGTTTCCGAGCACGCTTaGGCAGGGCATCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTVSEHA*AGHPCC
Trigger: GCAGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAAC...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCATGGGCCAGAGGGGCTTaGCTTCCGCATCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAWARGA*LPHPES
Trigger: GCTTTCTGGATGCGGAAGTCAAGCCCCTCTGGCCCA...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGACTGGCAGGCCCTTATTaGGGGGAGCCTGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRLAGPY*GEPGRT
Trigger: TGTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAG...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAATGGAGATGGGGGCGTaGAGTTTTTCTGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRMEMGA*SFSAAE
Trigger: CTCAGCAGCAGAAAAACTTCACGCCCCCATCTCCAT...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAATGAGCCTGCAGAGCTaGCTGAATGTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRMSLQS*LNVALL
Trigger: CAGCAAAGCCACATTCAGTCAGCTCTGCAGGCTCAT...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGCAGAGGAGTCAGCGCTaGAGGAGAGCACATGGACAG +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWQRSQR*RRAHGQ
Trigger: CTGTCCATGTGCTCTCCTTCAGCGCTGACTCCTCTG...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCCAGAGGAGTCAGCGCTaGAGGAGAGCACATGGACAG +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSQRSQR*RRAHGQ
Trigger: CTGTCCATGTGCTCTCCTTCAGCGCTGACTCCTCTG...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCCGGGGGCAGGGCCTGTaGCGATGGCATCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSRGQGL*RWHPWR
Trigger: TCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCG...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCGGCAAGCCTTGCCTCTaGAGCGGTCACAATTTCCGT +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTGKPCL*SGHNFR
Trigger: ACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCC...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTGATGGGGCGGCACTGTaGCCATCCAGGGAGCTTACT +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASDGAAL*PSRELT
Trigger: AGTAAGCTCCCTGGATGGTCACAGTGCCGCCCCATC...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTCAGAGCGGACCTGACTaGTCAGCTCCCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLQSGPD*SAPESA
Trigger: CGCAGACTCGGGAGCTGAGCAGTCAGGTCCGCTCTG...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCATGGTACTTGGCCATCTaGTCTGGCATCGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPWYLAI*SGIALP
Trigger: TGGCAGGGCGATGCCAGAGCAGATGGCCAAGTACCA...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGAGCAAGGCCGCCCGATaGCTGGGATGGGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWSKAAR*LGWELP
Trigger: AGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCT...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAGCCAGGCACAGGAACTaGCACTTGGGGCCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPARHRN*HLGPVR
Trigger: TCTCACGGGCCCCAAGTGGCAGTTCCTGTGCCTGGC...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTGGGTCTTGTGAGAGCTaGTGCTGGAGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASGSCES*CWRLTG
Trigger: GCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGACCC...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGGGGCGGGCTGGAGTaGAAGCCAGCCAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFWGGLE*KPARRL
Trigger: CAGTCTTCTGGCTGGCTTGCACTCCAGCCCGCCCCA...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCAGCCTGGAGAGTCCCTaGTCAGCCTCCACTGCCGGC +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETSLESP*SASTAG
Trigger: GCCGGCAGTGGAGGCTGAGCAGGGACTCTCCAGGCT...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGAGCTAGCTGGTGGTaGAGCAGAAGGACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSRASWW*SRRTRL
Trigger: AAGCCTAGTCCTTCTGCTCCACCACCAGCTAGCTCT...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCGGACTGATGTACTTCTaGCAGGCCCTTATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLGLMYF*QALIEG
Trigger: CCCCTCAATAAGGGCCTGCCAGAAGTACATCAGTCC...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACAGGCCTCCTGAGGTaGCTGGTGCAGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSTGLLR*LVQRDG
Trigger: TCCATCCCTCTGCACCAGCCACCTCAGGAGGCCTGT...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGACTGAAGGAGAGCACATaGACAGGAATAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRLKEST*TGIGTG
Trigger: CCCTGTCCCTATTCCTGTCCATGTGCTCTCCTTCAG...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACTGTGGCCAAGGCCATaGTGGAAGGACCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEELWPRP*WKDPGA
Trigger: TGCCCCCGGGTCCTTCCACCATGGCCTTGGCCACAG...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCTGTGGCCAAGGCCATaGTGGAAGGACCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGLWPRP*WKDPGA
Trigger: TGCCCCCGGGTCCTTCCACCATGGCCTTGGCCACAG...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCTGCATGGGGCGGGCTaGAGTGCAAGCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARLHGAG*SASQPE
Trigger: TTCTGGCTGGCTTGCACTCCAGCCCGCCCCATGCAG...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp GCCTTGCCTCTGAAGCGGTCACAATTTCCGTGGTACAGCAGGCCCTTTCCCGTGAGACTCTGCGGGATATaGGTGGGCACCGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: ALPLKRSQFPWYSRPFPVRLCGI*VGTAAC
Trigger: ACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCT...CACGGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCGCTTCAGAGGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp GAGAAGCACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTGGGAAAGCTGAGAAGCACCTaGCAGACTCTGCGGGATATG +
Preference number: 4 (lower is better)
Translates to: EKHLADSAGYGWAPQRVGKLRST*QTLRDM
Trigger: CATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGCTT...TCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp CCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACCCACCCAGACCCAAGTaGCAAGCCTTGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSMGGTSEVPRSAPLRTHPPRPK*QALPLK
Trigger: CTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGG...GTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCGGCTATACTGGGACTTaGAATTTGGGGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: QPSSDRAARPRARGSLHLGYTGT*NLGAQT
Trigger: TGTCTGGGCCCCCAAATTCCAAGTCCCAGTATAGCC...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGACTGGGCGCTGTACCCTaGGAGTCAGGAGCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRLGAVP*ESGAKS
Trigger: GCTCTTGGCTCCTGACTCCCAGGGTACAGCGCCCAG...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAAGGTCTGCCTTGCCATaGCTGTTCAGTCATTCGCTC +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRRSALP*LFSHSL
Trigger: GAGCGAATGACTGAACAGCCATGGCAAGGCAGACCT...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGCCCTGAGCTTCCGCTaGTGGGACCGCAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETALSFR*WDRNRL
Trigger: AAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CAGCAAGGGCCCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCGCCACCAATCTGTCCTaGTGGGACAGAAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: QQGPGSLHGRHIRSAEKRATNLS*WDRNLF
Trigger: AAAAAGGTTTCTGTCCCATCAGGACAGATTGGTGGC...GCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGCCCTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTTCTGCCAGAAAATTaGGGGGTGACTGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAVLPEN*GVTAES
Trigger: GCTCTCTGCAGTCACCCCTCAATTTTCTGGCAGAAC...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAACTGGCAGGCCCTTATTaGGGGGAGCCTGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQLAGPY*GEPGRT
Trigger: TGTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAG...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCTGCTTAGCTTTGGACTaGTGTACTTCTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTCLALD*CTSGRP
Trigger: GGGCCTGCCAGAAGTACATCAGTCCAAAGCTAAGCA...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGCGGCATGAAAGACTTTaGCCTGGGGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTRHERL*PGGQAQ
Trigger: CTGTGCCTGGCCCCCAGGTCAAAGTCTTTCATGCCG...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCGGCATGAAAGACTTTaGCCTGGGGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFRHERL*PGGQAQ
Trigger: CTGTGCCTGGCCCCCAGGTCAAAGTCTTTCATGCCG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTAERAQ*VYILGD
Trigger: GTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGC...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAAERAQ*VYILGD
Trigger: GTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTCGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSREALR*ELTLLQ
Trigger: CTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCG...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCGAGAAGCGCTCCGCTaGGAACTCACGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETREALR*ELTLLQ
Trigger: CTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCGAGTTTTGTCCGCTTTaGGCACACAGCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSEFCPL*AHSLGM
Trigger: CATCCCCAGGCTGTGTGCTCAAAGCGGACAAAACTC...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGCTGTGGCTCTGGCCTaGGTTTTGTCCGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEAVALA*VLSALS
Trigger: GCTCAAAGCGGACAAAACTCAGGCCAGAGCCACAGC...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAACAGCAAACCTCTGAATaGAGGATGAGTTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQQQTSE*RMSYWA
Trigger: CGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTG...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCATCCTTGGAGACCCCTaGTTTGGCAGAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSILGDP*FGRGVS
Trigger: GCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGAT...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR GCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCTGGGGCGGGCTGGAGTaGAAGCCAGCCAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSWGGLE*KPARRL
Trigger: CAGTCTTCTGGCTGGCTTGCACTCCAGCCCGCCCCA...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCGCACCTGGCAGACTCTaGGGGATATGGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSAPGRL*GIWVGT
Trigger: GGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGC...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR GCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCACAGGTGTGCCAACTaGTCTGCCACCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTHRCAN*SATRAC
Trigger: ACAGGCTCTGGTGGCAGAGCAGTTGGCACACCTGTG...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAAAGGGCTCTGGGCTCTaGAGTCCACCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAKGSGL*SPPPRT
Trigger: AGTTCGTGGAGGTGGACTGCAGAGCCCAGAGCCCTT...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTCTCTGCCCCACCCTCTaGTGCGGCCTCGCCTGTAGG +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATLCPTL*CGLACR
Trigger: CCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAG...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATTCTGCAGTCCGAAGGTaGAAAGTGGGTCTCGAGAGA +
Preference number: 4 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYSAVRR*KVGLER
Trigger: TCTCTCGAGACCCACTTTGCACCTTCGGACTGCAGA...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR GCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATTGGCAGCTGAGCAGATaGTCCAAGTCCAAATCCGTC +
Preference number: 4 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYWQLSR*SKSKSV
Trigger: GACGGATTTGGACTTGGAGCATCTGCTCAGCTGCCA...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGGGTGTCACTGCATaGCTTCTTTGTCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERAGVTA*LLCPQR
Trigger: GCGCTGGGGACAAAGAAGCCATGCAGTGACACCCGC...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGTGAACTGGACCCTGTaGGGCTCCGACATGGCTACC +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLVNWTL*GSDMAT
Trigger: GGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCAC...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCGCGAGTCCATGGCAGTaGCCGCCTGGAGCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTASPWQ*PPGASR
Trigger: ACGACTTGCTCCAGGCGGCCACTGCCATGGACTCGC...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCTTCTCCAGGGGTGCTaGCAGGCCTTCGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETLLQGC*QAFGER
Trigger: TCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCGCCTGCGTGTGTGCCTaGCATTCGTCCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTACVCA*HSSWYL
Trigger: CAAGTACCAGGACGAATGCCAGGCACACACGCAGGC...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGAAGTCAGGTGCCCATaGCCTCGTCTGCTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWEVRCP*PRLLSL
Trigger: TAAGGAGAGCAGACGAGGCCATGGGCACCTGACTTC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTGCCCGATGCCTGGGATaGGAGCTCCCTGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATARCLG*ELPARG
Trigger: GCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGC...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGATGCAGCCAATTCCTTaGACACGGCTTCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWMQPIP*TRLPPR
Trigger: CCTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCAT...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGGACTGATGTACTTCTaGCAGGCCCTTATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAGLMYF*QALIEG
Trigger: CCCCTCAATAAGGGCCTGCCAGAAGTACATCAGTCC...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTCCCGTGAGACGTCCGTaGCAAGCTGTGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSPVRRP*QAVVLS
Trigger: GCTAAGCACCACAGCTTGCCACGGACGTCTCACGGG...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAAAACAGAACTCTGGACTaGTGTTCCTCCCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQNRTLD*CSSRGR
Trigger: TCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTGTT...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAACTGGAATCTCCGTTTaGACCGCCTGGAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPETGISV*TAWRGY
Trigger: GTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGT...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCCTGGGTCCCACCACTaGAATCTCCGTTTGGACCGC +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARPGSHH*NLRLDR
Trigger: GCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGG...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp GGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAACTTTGCCACTCCCTaGGTCCCACCACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: GRHIRSAEKRSAENSRSSNFATP*VPPLES
Trigger: AGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTT...GGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACAGCTTTGGGCTGCTaGATTTGTAGGGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRTALGC*ICRVKP
Trigger: TGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGT...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTCCAGCCAGAAGACTGTaGCCAAGGCCATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASPARRL*PRPWWK
Trigger: CTTCCACCATGGCCTTGGCCACAGTCTTCTGGCTGG...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCACCAGCCAGAAGACTGTaGCCAAGGCCATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAPARRL*PRPWWK
Trigger: CTTCCACCATGGCCTTGGCCACAGTCTTCTGGCTGG...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAATCTGCGGGATATGGGTaGGCACCGCAGCGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEESAGYG*APQRVG
Trigger: TCCCACACGCTGCGGTGCCCACCCATATCCCGCAGA...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCAGACTCTGCGGGATATaGGTGGGCACCGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFRLCGI*VGTAAC
Trigger: ACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCT...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCACGGTCACAATTTCCGTaGTACAGCAGGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPRSQFP*YSRPFP
Trigger: GGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCG...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp TCCGTGGTACAGCAGGCCCTTTCCCGTGAAGCTGAGAAGCACCTGGCAGACTCTCCACCCAGACCCAAGTaGCAAGCCTTGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVVQQALSREAEKHLADSPPRPK*QALPLK
Trigger: CTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGG...AGAGTCTGCCAGGTGCTTCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGGCCCGGCTCCCTCCATaGGAGGCACATCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGARLPP*EAHQKC
Trigger: GCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGC...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCGCCCGGCTCCCTCCATaGGAGGCACATCAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTARLPP*EAHQKC
Trigger: GCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGC...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCGGAGCCCCTGAGCAGTaGGGTGCTCTGAGGTACTCT +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFGAPEQ*GALRYS
Trigger: AGAGTACCTCAGAGCACCCCACTGCTCAGGGGCTCC...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACACACAGCCTGGGGATaGGGCGGCACTGTGACCATC +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAHTAWG*GGTVTI
Trigger: GATGGTCACAGTGCCGCCCCATCCCCAGGCTGTGTG...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCACGCGCAATGGTACGTaGGGAGGAGGGAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCTRNGT*GGGSTK
Trigger: TTTGGTGCTCCCTCCTCCCCACGTACCATTGCGCGT...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCCGGCTCACAGTCCTaGTGCTGTTCTCCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RRTPSSRKGAVSVHPGRPAGSQS*CCSPAP
Trigger: TGGGGCAGGAGAACAGCATCAGGACTGTGAGCCGGC...AGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGTTTCCGAGCACGCTTaGGCAGGGCATCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEVSEHA*AGHPCC
Trigger: GCAGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAAC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTTGGGCCAGAGGGGCTTaGCTTCCGCATCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSWARGA*LPHPES
Trigger: GCTTTCTGGATGCGGAAGTCAAGCCCCTCTGGCCCA...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGGGTGCAGGCAGTGTaGATTCAGAGTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRRVQAV*IQSSQL
Trigger: CAGCTGGGAACTCTGAATTCACACTGCCTGCACCCT...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAAGGGTGCAGGCAGTGTaGATTCAGAGTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAARVQAV*IQSSQL
Trigger: CAGCTGGGAACTCTGAATTCACACTGCCTGCACCCT...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGCAGAAAATTGAGGGGTaGCTGCAGAGAGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWQKIEG*LQRASW
Trigger: CCAGCTAGCTCTCTGCAGTCACCCCTCAATTTTCTG...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCCAGAAAATTGAGGGGTaGCTGCAGAGAGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSQKIEG*LQRASW
Trigger: CCAGCTAGCTCTCTGCAGTCACCCCTCAATTTTCTG...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCGGCATGAAAGACTTTaGCCTGGGGGCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETRHERL*PGGQAQ
Trigger: CTGTGCCTGGCCCCCAGGTCAAAGTCTTTCATGCCG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCGGCAAGCCTTGCCTCTaGAGCGGTCACAATTTCCGT +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTGKPCL*SGHNFR
Trigger: ACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCC...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGGCAAGCCTTGCCTCTaGAGCGGTCACAATTTCCGT +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEGKPCL*SGHNFR
Trigger: ACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCC...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCATGCTCTGAGGTACTCTaGCCAAATGCCAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPCSEVL*PNARGS
Trigger: TGATCCCCTGGCATTTGGTCAGAGTACCTCAGAGCA...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAGATGGGGCGGCACTGTaGCCATCCAGGGAGCTTACT +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPADGAAL*PSRELT
Trigger: AGTAAGCTCCCTGGATGGTCACAGTGCCGCCCCATC...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCACCACTGGTTGAGTGGTaGCTTAGGAGCTCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPPLVEW*LRSSAV
Trigger: TACTGCAGAGCTCCTAAGTCACCACTCAACCAGTGG...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACCCACTGGTTGAGTGGTaGCTTAGGAGCTCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PSMGGTSEVPRSAPLRTHPLVEW*LRSSAV
Trigger: TACTGCAGAGCTCCTAAGTCACCACTCAACCAGTGG...GTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCTGTAATCCGAACAGCTaGTGCAGCCGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTCNPNS*CSRLTV
Trigger: GACTGTGAGCCGGCTGCAGCAGCTGTTCGGATTACA...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAACTTTGCCTGCGTGTGTaGCTGGCATTCGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPELCLRV*LAFVLV
Trigger: TACCAGGACGAATGCCAGGCACACACGCAGGCAAAG...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTTTGGCAACCTTTGCCTaGGTGTGTGCCTGGCATTCG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASLATFA*VCAWHS
Trigger: CGAATGCCAGGCACACACGCAGGCAAAGGTTGCCAA...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCCATCTTGGCAACCTTTaGCTGCGTGTGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCHLGNL*LRVCLA
Trigger: TGCCAGGCACACACGCAGGCAAAGGTTGCCAAGATG...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTAGGATTGAAGTCAGGTaGCCATGGCCTCGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASRIEVR*PWPRLL
Trigger: GAGCAGACGAGGCCATGGGCACCTGACTTCAATCCT...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGGATTGAAGTCAGGTaGCCATGGCCTCGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSRIEVR*PWPRLL
Trigger: GAGCAGACGAGGCCATGGGCACCTGACTTCAATCCT...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCGGGATGGGAGCTCCCTaGTCGAGGCCCCAATACTCA +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCGMGAP*SRPQYS
Trigger: TGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCC...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGGGATGGGAGCTCCCTaGTCGAGGCCCCAATACTCA +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEGMGAP*SRPQYS
Trigger: TGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CAGCAAGGGCCCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCAGTTCCCAGCTGCTCTaGTATTCAATGCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: QQGPGSLHGRHIRSAEKRSSQLL*YSMQPI
Trigger: AATTGGCTGCATTGAATAGCAGAGCAGCTGGGAACT...GCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGCCCTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTTTCAGAGTTCCCAGCTaGTCTGCTATTCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRAFRVPS*SAIQCS
Trigger: GCTGCATTGAATAGCAGAGCAGCTGGGAACTCTGAA...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGGGTCTTGTGAGAGCTaGTGCTGGAGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWGSCES*CWRLTG
Trigger: GCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGACCC...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAAGTGTGGGAGAGGCGCTaGATGGGGCGGGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKVWERR*MGRAGV
Trigger: CACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACAC...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGATCCAGGGAGCTTACTaGAGCCAGAAGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTIQGAY*SQKEPL
Trigger: CAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGAT...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGTATTCTGCTCCAGCTaGACGCGCAATGGTACGTGG +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAVFCSS*TRNGTW
Trigger: CCACGTACCATTGCGCGTGCAGCTGGAGCAGAATAC...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCTCAGAGACTTTCGCTaGGCCAGGGAAACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERLRDFR*ARETPA
Trigger: TGCAGGGGTTTCCCTGGCGCAGCGAAAGTCTCTGAG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCTCAGAGACTTTCGCTaGGCCAGGGAAACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFLRDFR*ARETPA
Trigger: TGCAGGGGTTTCCCTGGCGCAGCGAAAGTCTCTGAG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGAGGATTCAGGGAACCTaGGAGAGAGGTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWRIQGT*ERGELD
Trigger: GTCCAGTTCACCTCTCTCCCAGGTTCCCTGAATCCT...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACGCGAGTCCATGGCAGTaGCCGCCTGGAGCAAGTCGT +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNASPWQ*PPGASR
Trigger: ACGACTTGCTCCAGGCGGCCACTGCCATGGACTCGC...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGCTTCTCCAGGGGTGCTaGCAGGCCTTCGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLLLQGC*QAFGER
Trigger: TCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAG...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAGCCTGCGTGTGTGCCTaGCATTCGTCCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRACVCA*HSSWYL
Trigger: CAAGTACCAGGACGAATGCCAGGCACACACGCAGGC...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCTTGATCTTCACCACCTaGCACAGTAGCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTLIFTT*HSSSLI
Trigger: GATCAGGGAGCTACTGTGCCAGGTGGTGAAGATCAA...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCTTCCACCGAGGAGGCTaGATTGCGGATCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSFHRGG*IADQVF
Trigger: GAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAA...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAGGCCTTGGAGCTTATTaGCAAATGGAGATGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRGLGAY*QMEMGA
Trigger: CGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCC...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGTGTGGGAGAAGCCTTTaGGCCTTGGAGCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWCGRSL*ALELIG
Trigger: GCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACA...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCGAGGGATGGAAGCCCTaGCCTTTGGCCGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCEGWKP*PLAAVF
Trigger: GAAGACAGCGGCCAAAGGCCAGGGCTTCCATCCCTC...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCGAGGGATGGAAGCCCTaGCCTTTGGCCGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTEGWKP*PLAAVF
Trigger: GAAGACAGCGGCCAAAGGCCAGGGCTTCCATCCCTC...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGAGGGATGGAAGCCCTaGCCTTTGGCCGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQEGWKP*PLAAVF
Trigger: GAAGACAGCGGCCAAAGGCCAGGGCTTCCATCCCTC...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAACAGGCCTCCTGAGGTaGCTGGTGCAGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEETGLLR*LVQRDG
Trigger: TCCATCCCTCTGCACCAGCCACCTCAGGAGGCCTGT...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCACAGGCCTCCTGAGGTaGCTGGTGCAGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETTGLLR*LVQRDG
Trigger: TCCATCCCTCTGCACCAGCCACCTCAGGAGGCCTGT...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGATGTGGCTTTGCTGGATaGCTCAGGGCAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRCGFAG*LRAEED
Trigger: GTCCTCTTCTGCCCTGAGCCATCCAGCAAAGCCACA...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGCCTGGGTCCCACCACTaGAATCTCCGTTTGGACCGC +
Preference number: 4 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWPGSHH*NLRLDR
Trigger: GCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGG...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTAGGAGTTCGAGCTCATaGCCCCAGACAGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSRSSSS*PQTALG
Trigger: GCCCAAAGCTGTCTGGGGCCATGAGCTCGAACTCCT...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCCAGCCAGAAGACTGTaGCCAAGGCCATGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERPARRL*PRPWWK
Trigger: CTTCCACCATGGCCTTGGCCACAGTCTTCTGGCTGG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCAGACTCTGCGGGATATaGGTGGGCACCGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSRLCGI*VGTAAC
Trigger: ACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCT...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCCACCCAGACCCAAGTaGCAAGCCTTGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFPPRPK*QALPLK
Trigger: CTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACCACACAGCCTGGGGATaGGGCGGCACTGTGACCATC +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNHTAWG*GGTVTI
Trigger: GATGGTCACAGTGCCGCCCCATCCCCAGGCTGTGTG...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCTTCAGACTCACCTTGTaGCACAGACCTCACAAGACA +
Preference number: 4 (lower is better)
Translates to: SSDRAARPRARGSLHLLSFRLTL*HRPHKT
Trigger: TGTCTTGTGAGGTCTGTGCCACAAGGTGAGTCTGAA...GCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTAGAGGTCTTGCTCCTTaGGAAACCGGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSRGLAP*ETGKAS
Trigger: GCTGGCCTTCCCGGTTTCCCAAGGAGCAAGACCTCT...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CAA 72 bp CCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTaGCCATGGCTGTTCAGTCATTCGCTCTTTCATTAC +
Preference number: 4 (lower is better)
Translates to: PTLCCGLACRSA*PWLFSHSLFHY
Trigger: GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTAGGCCTCCTGTTTGGTaGTCTGAGGGCAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASRPPVW*SEGKAM
Trigger: CATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCT...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACAGAAAATTGAGGGGTaGCTGCAGAGAGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAQKIEG*LQRASW
Trigger: CCAGCTAGCTCTCTGCAGTCACCCCTCAATTTTCTG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGTTCTGCCAGAAAATTaGGGGGTGACTGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAVLPEN*GVTAES
Trigger: GCTCTCTGCAGTCACCCCTCAATTTTCTGGCAGAAC...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCCTGCAGAGCTGACTaGATGTGGCTTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERACRAD*MWLCWM
Trigger: CATCCAGCAAAGCCACATTCAGTCAGCTCTGCAGGC...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGAERAQ*VYILGD
Trigger: GTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGC...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACAGCAGAAAGGGCGCAGTaGGTGTACATCCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTAERAQ*VYILGD
Trigger: GTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGC...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAAACTGGCCCCCACAGTaGGCACACCCTAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQNWPPQ*AHPRCS
Trigger: AGAACACCTAGGGTGTGCTCACTGTGGGGGCCAGTT...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCTGGAATGTCTATCTGTaGCTTGGGACCCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSWNVYL*LGTPGI
Trigger: GATACCAGGGGTCCCAAGTCACAGATAGACATTCCA...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCGGGAGAGAAGAGGGCTaGCTGAATTCCTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTGREEG*LNSWSN
Trigger: ATTGGACCAGGAATTCAGGCAGCCCTCTTCTCTCCC...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGGGAGAGAAGAGGGCTaGCTGAATTCCTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAGREEG*LNSWSN
Trigger: ATTGGACCAGGAATTCAGGCAGCCCTCTTCTCTCCC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACCAGAGCGGACCTGACTaGTCAGCTCCCGAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYQSGPD*SAPESA
Trigger: CGCAGACTCGGGAGCTGAGCAGTCAGGTCCGCTCTG...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGCAGGGCATCCTTGCTaGAGGGCAGGAATGACGCAA +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETAGHPC*RAGMTQ
Trigger: TTGCGTCATTCCTGCCCTGCAGCAAGGATGCCCTGC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCGCAGGGCATCCTTGCTaGAGGGCAGGAATGACGCAA +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTAGHPC*RAGMTQ
Trigger: TTGCGTCATTCCTGCCCTGCAGCAAGGATGCCCTGC...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCATCTTGGCAACCTTTaGCTGCGTGTGTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERHLGNL*LRVCLA
Trigger: TGCCAGGCACACACGCAGGCAAAGGTTGCCAAGATG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCCCGAGGAGGCTGGATTaGGGATCAAGTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCPRRLD*GSSLHP
Trigger: TGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGG...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAATCTTGTGAGAGCTGCTaGTGGAGGCTGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEESCESC*WRLTGL
Trigger: GAGGCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGA...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACTCCCGAGGAAGAGCTaGCAGAAGAAACCCCATGTT +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQALPRKS*QKKPHV
Trigger: AACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCGGCGGACAGAGGTCTTaGTCCTTGGGAAACCGGGAA +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCGGQRS*SLGNRE
Trigger: TTCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCC...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTCCACTGCCGGCCTCTaGTTGGCTTTGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSSTAGL*LALSSA
Trigger: TGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGTGGA...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGTCACGCCCGGTAAGTaGTCAGAGACTTTCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETVTPGK*SETFAA
Trigger: CGCAGCGAAAGTCTCTGAGCACTTACCGGGCGTGAC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCCACCAACATAGTCGCTaGACAAAAGCCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSHQHSR*TKATAP
Trigger: AGGGGCTGTGGCTTTTGTGCAGCGACTATGTTGGTG...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCACACTCCTGCCCTGTaGACCACTCTCACACCCAAA +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFHTPAL*TTLTPK
Trigger: TTTGGGTGTGAGAGTGGTGCACAGGGCAGGAGTGTG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR GCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCTTAGCGGGTGTCACTaGATGGCTTCTGGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARLSGCH*MASGLL
Trigger: CAGCAGACCAGAAGCCATGCAGTGACACCCGCTAAG...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590769.5
CDS-3UTR GCA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTTCCAAGTTCTGCTTCTaGAGTCCGAAGGTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPSKFCF*SPKVQS
Trigger: ACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGA...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTAGGATTCAGGGAACCTaGGAGAGAGGTGAACTGGAC +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASRIQGT*ERGELD
Trigger: GTCCAGTTCACCTCTCTCCCAGGTTCCCTGAATCCT...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAGGAGCCCCTGAGCAGGCAGCGTTTGTGATCTaGTTCAAAGAGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RHCDHPGSLLQPEGAPEQAAFVI*FKEGEC
Trigger: ACACTCACCCTCTTTGAACCAGATCACAAACGCTGC...CTGCTCAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGCCTGCGTGTGTGCCTaGCATTCGTCCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETACVCA*HSSWYL
Trigger: CAAGTACCAGGACGAATGCCAGGCACACACGCAGGC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GGTATCCTTGACCCTCAGAGAGATGAAGGGCTCTGGGCTCTGCAGTCCACCTCCCCTCTTCCAGCATCTTaGCAACCTTTGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GILDPQRDEGLWALQSTSPLPAS*QPLPAC
Trigger: ACACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGG...GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCTCTGAGGGTCAAGGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAACCTCTTCCAGCATCTTaGCAACCTTTGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEPLPAS*QPLPAC
Trigger: ACACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGG...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCTGAGGGCAAAGCAATaGGGCCACCAATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERLRAKQ*GHQSVL
Trigger: CAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCATTCCACCGAGGAGGCTaGATTGCGGATCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAFHRGG*IADQVF
Trigger: GAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAA...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGATGCAGCCAATTCCTTaGACACGGCTTCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTMQPIP*TRLPPR
Trigger: CCTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCAT...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAAGAGCTAGCTGGTGGTaGAGCAGAAGGACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQARASWW*SRRTRL
Trigger: AAGCCTAGTCCTTCTGCTCCACCACCAGCTAGCTCT...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGGACTGATGTACTTCTaGCAGGCCCTTATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAGLMYF*QALIEG
Trigger: CCCCTCAATAAGGGCCTGCCAGAAGTACATCAGTCC...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGGCCTTGGAGCTTATTaGCAAATGGAGATGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSGLGAY*QMEMGA
Trigger: CGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCC...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAGGAAGCCCTGGCCTTTaGCCGCTGTCTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPGSPGL*PLSSLT
Trigger: AGTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCC...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTGGAAGCCCTGGCCTTTaGCCGCTGTCTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARGSPGL*PLSSLT
Trigger: AGTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCC...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAAACAGAACTCTGGACTaGTGTTCCTCCCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPNRTLD*CSSRGR
Trigger: TCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTGTT...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAATCCGTTTGGACCGCCTaGAGGGGCTACCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQSVWTA*RGYQSQ
Trigger: TTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGA...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGTCCGTTTGGACCGCCTaGAGGGGCTACCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGSVWTA*RGYQSQ
Trigger: TTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGA...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAAACTTTGCCACTCCCTaGGTCCCACCACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAANFATP*VPPLES
Trigger: AGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTT...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAGGAGTTCGAGCTCATaGCCCCAGACAGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCRSSSS*PQTALG
Trigger: GCCCAAAGCTGTCTGGGGCCATGAGCTCGAACTCCT...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TTTGGGGGCCCAGACAACCTTCTAGTCAGGACGGCACAGATAATGATGTGCAAGCTGCATGGGGCGGGCTaGAGTGCAAGCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FGGPDNLLVRTAQIMMCKLHGAG*SASQPE
Trigger: TTCTGGCTGGCTTGCACTCCAGCCCGCCCCATGCAG...CTTGCACATCATTATCTGTGCCGTCCTGACTAGAAGGTTGTCTGGGCCCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GGTATCCTTGACCCTCAGAGAGATGAAGGGCTCTGGGCTCTGCAGTCCACCTCCAAGCTGAGAAGCACCTaGCAGACTCTGCGGGATATG +
Preference number: 4 (lower is better)
Translates to: GILDPQRDEGLWALQSTSKLRST*QTLRDM
Trigger: CATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGCTT...GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCTCTGAGGGTCAAGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCGGTCACAATTTCCGTaGTACAGCAGGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFRSQFP*YSRPFP
Trigger: GGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCCACCCAGACCCAAGTaGCAAGCCTTGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETPPRPK*QALPLK
Trigger: CTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCAGAGATGAAGGGCTCTaGGCTCTGCAGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSRDEGL*ALQSTS
Trigger: GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCT...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGACATAACCCCACTGCCTaGAGAGCCCCAGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRHNPTA*RAPGLQ
Trigger: TTGAAGTCCTGGGGCTCTCCAGGCAGTGGGGTTATG...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAATGGGCAGAGAAGCCTaGAGAGTCCCTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAMGREA*RVPAQP
Trigger: AGGCTGAGCAGGGACTCTCCAGGCTTCTCTGCCCAT...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGGGACCCGGGTGTTTATaGGCAGAGAAGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGGPGCL*AEKPGE
Trigger: CTCTCCAGGCTTCTCTGCCCATAAACACCCGGGTCC...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAAAAGGAAGGAGGGCCTaGGACCCGGGTGTTTATGGG +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEKGRRA*DPGVYG
Trigger: CCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTT...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCATTCTTATCTCCAGGCTaGAGGCCTTTTACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPFLSPG*RPFTFP
Trigger: AGGGAAGGTAAAAGGCCTTCAGCCTGGAGATAAGAA...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTCCTCAGAGTTATCGATaGAGGAGTCGGATTCATCAT +
Preference number: 4 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPPQSYR*RSRIHH
Trigger: ATGATGAATCCGACTCCTTCATCGATAACTCTGAGG...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR TCA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTGTCATCTTCAGACTCTaGTGCTTGTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPVIFRL*CLSKLQ
Trigger: CTGCAGTTTAGACAAGCATCAGAGTCTGAAGATGAC...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR TCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAGCTGCAGGGCAGGAATaGCGCAAGATAGGCATACAC +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAAAGQE*RKIGIH
Trigger: GTGTATGCCTATCTTGCGTCATTCCTGCCCTGCAGC...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTGTTTCCGAGCACGCTTaGGCAGGGCATCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATVSEHA*AGHPCC
Trigger: GCAGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAAC...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTAGGCCTCCTGTTTGGTaGTCTGAGGGCAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLRPPVW*SEGKAM
Trigger: CATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCT...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGGCCTCCTGTTTGGTaGTCTGAGGGCAAAGCAATG +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPRPPVW*SEGKAM
Trigger: CATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCT...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACAAGTCTTCATCCAATaGGTCCTCCAGGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAQVFIQ*VLQVDR
Trigger: CCTGTCAACCTGGAGGACTCATTGGATGAAGACTTG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCAGGGTGCAGGCAGTGTaGATTCAGAGTTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSRVQAV*IQSSQL
Trigger: CAGCTGGGAACTCTGAATTCACACTGCCTGCACCCT...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGTGCTTAGCTTTGGACTaGTGTACTTCTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERCLALD*CTSGRP
Trigger: GGGCCTGCCAGAAGTACATCAGTCCAAAGCTAAGCA...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTGCTTAGCTTTGGACTaGTGTACTTCTGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARCLALD*CTSGRP
Trigger: GGGCCTGCCAGAAGTACATCAGTCCAAAGCTAAGCA...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTATGGAGATGGGGGCGTaGAGTTTTTCTGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARMEMGA*SFSAAE
Trigger: CTCAGCAGCAGAAAAACTTCACGCCCCCATCTCCAT...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGCCTGCAGAGCTGACTaGATGTGGCTTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEACRAD*MWLCWM
Trigger: CATCCAGCAAAGCCACATTCAGTCAGCTCTGCAGGC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCGGCAAGCCTTGCCTCTaGAGCGGTCACAATTTCCGT +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSGKPCL*SGHNFR
Trigger: ACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCC...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTGCTCTGAGGTACTCTaGCCAAATGCCAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARCSEVL*PNARGS
Trigger: TGATCCCCTGGCATTTGGTCAGAGTACCTCAGAGCA...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGAGCAGTGGGGTGCTCTaGGGTACTCTGACCAAATGC +
Preference number: 4 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWSSGVL*GTLTKC
Trigger: GCATTTGGTCAGAGTACCTCAGAGCACCCCACTGCT...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACGCTGTGGCTCTGGCCTaGGTTTTGTCCGCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNAVALA*VLSALS
Trigger: GCTCAAAGCGGACAAAACTCAGGCCAGAGCCACAGC...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGTATCCTTGACCCTCAGAGAGATGAAGGGCTCTGGGCTCTGCAGTCCACCTCCTACTCTCAACGTGCCTaGTCACTTAGCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GILDPQRDEGLWALQSTSYSQRA*SLSWSS
Trigger: ACTGCTCCAGCTAAGTGATCAGGCACGTTGAGAGTA...GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCTCTGAGGGTCAAGGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTCACAGGTGTATGTGCTaGGGACACCGTATACTCTCA +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASHRCMC*GHRILS
Trigger: TGAGAGTATACGGTGTCCTCAGCACATACACCTGTG...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCCACAGGTGTATGTGCTaGGGACACCGTATACTCTCA +
Preference number: 4 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCHRCMC*GHRILS
Trigger: TGAGAGTATACGGTGTCCTCAGCACATACACCTGTG...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGCCTCTGCTTGGCTTTaGGCTCAGCAATACAAATCT +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWASAWL*AQQYKS
Trigger: AGATTTGTATTGCTGAGCTCAAAGCCAAGCAGAGGC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCGAGGAAGCGAAGAAATaGCAACTCGACGTCCGCGCA +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSEEAKK*QLDVRA
Trigger: TGCGCGGACGTCGAGTTGGCATTTCTTCGCTTCCTC...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR GCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTCTTAGCGGGTGTCACTaGATGGCTTCTTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSLSGCH*MASLSP
Trigger: TGGGGACAAAGAAGCCATGCAGTGACACCCGCTAAG...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR GCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCATGTAATCCGAACAGCTaGTGCAGCCGGCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPACNPNS*CSRLTV
Trigger: GACTGTGAGCCGGCTGCAGCAGCTGTTCGGATTACA...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCGATGCTTGTCTAAACTaGAGGGTTCCCGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTDACLN*RVPELM
Trigger: CATTAACTCGGGAACCCTGCAGTTTAGACAAGCATC...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGGGAGAGAAGAGGGCTaGCTGAATTCCTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERGREEG*LNSWSN
Trigger: ATTGGACCAGGAATTCAGGCAGCCCTCTTCTCTCCC...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCCTTTGCCTGCGTGTGTaGCTGGCATTCGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCLCLRV*LAFVLV
Trigger: TACCAGGACGAATGCCAGGCACACACGCAGGCAAAG...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATTGGCAACCTTTGCCTaGGTGTGTGCCTGGCATTCG +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTLATFA*VCAWHS
Trigger: CGAATGCCAGGCACACACGCAGGCAAAGGTTGCCAA...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAATCCGGTCCCTCTaGTCCTTGTCTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTQIRSL*SLSFSS
Trigger: AGAGGAGAAAGACAAGGAGCAGAGGGACCGGATTTG...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCAACAGAGTTCTGGCCTaGATCCAGCCTTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGNRVLA*IQPLGQ
Trigger: CTGGCCCAAAGGCTGGATGCAGGCCAGAACTCTGTT...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATAACAGAGTTCTGGCCTaGATCCAGCCTTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDNRVLA*IQPLGQ
Trigger: CTGGCCCAAAGGCTGGATGCAGGCCAGAACTCTGTT...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCAGGATTGAAGTCAGGTaGCCATGGCCTCGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETRIEVR*PWPRLL
Trigger: GAGCAGACGAGGCCATGGGCACCTGACTTCAATCCT...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCATTCAGAGTTCCCAGCTaGTCTGCTATTCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPFRVPS*SAIQCS
Trigger: GCTGCATTGAATAGCAGAGCAGCTGGGAACTCTGAA...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGACTCCCGAGGAAGAGCTaGCAGAAGAAACCCCATGTT +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRLPRKS*QKKPHV
Trigger: AACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAG...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAACAGACAGCTTTGGGCTaGTGGATTTGTAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEQTALG*WICRVK
Trigger: CTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTG...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAATCCTTGGAGACCCCTaGTTTGGCAGAGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQILGDP*FGRGVS
Trigger: GCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGAT...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR GCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAATGGGGCGGGCTGGAGTaGAAGCCAGCCAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKWGGLE*KPARRL
Trigger: CAGTCTTCTGGCTGGCTTGCACTCCAGCCCGCCCCA...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCGGTACTCTGACCAAATaGCAGGGGATCAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSGTLTK*QGIRQI
Trigger: AATCTGCCTGATCCCCTGGCATTTGGTCAGAGTACC...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCACCAACATAGTCGCTaGACAAAAGCCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERHQHSR*TKATAP
Trigger: AGGGGCTGTGGCTTTTGTGCAGCGACTATGTTGGTG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCGCAGCGTTTGTGATCTaGTTCAAAGAGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSAAFVI*FKEGEC
Trigger: ACACTCACCCTCTTTGAACCAGATCACAAACGCTGC...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTTGGGTAGAAGAACTCTaGGCAGCGTTTGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASWVEEL*AAFVIW
Trigger: CCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCA...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGACCTCTTCCAGCATCTTaGCAACCTTTGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRPLPAS*QPLPAC
Trigger: ACACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGG...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTTTGATCTTCACCACCTaGCACAGTAGCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: GRPARSDSTQTQVASLASLIFTT*HSSSLI
Trigger: GATCAGGGAGCTACTGTGCCAGGTGGTGAAGATCAA...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATGAAGTCAGGTGCCCATaGCCTCGTCTGCTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDEVRCP*PRLLSL
Trigger: TAAGGAGAGCAGACGAGGCCATGGGCACCTGACTTC...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTCTGAGGGCAAAGCAATaGGGCCACCAATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSLRAKQ*GHQSVL
Trigger: CAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAG...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGCTGAGGGCAAAGCAATaGGGCCACCAATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWLRAKQ*GHQSVL
Trigger: CAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAG...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCAGAGAGCTAGCTGGTaGTGGAGCAGAAGGACTAGG +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGQRASW*WSRRTR
Trigger: CCTAGTCCTTCTGCTCCACCACCAGCTAGCTCTCTG...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCCAGAGAGCTAGCTGGTaGTGGAGCAGAAGGACTAGG +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCQRASW*WSRRTR
Trigger: CCTAGTCCTTCTGCTCCACCACCAGCTAGCTCTCTG...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATGGCCTTGGAGCTTATTaGCAAATGGAGATGGGGGCG +
Preference number: 4 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDGLGAY*QMEMGA
Trigger: CGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCC...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGGAAGCCTTTGGGCCTTaGAGCTTATTGGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWEAFGP*SLLANG
Trigger: TCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTC...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGAAGAGGACGAGGCTaGGGTCTTGTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGRRGRG*GLVRAA
Trigger: AGCAGCTCTCACAAGACCCCAGCCTCGTCCTCTTCT...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATAGAAGAGGACGAGGCTaGGGTCTTGTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDRRGRG*GLVRAA
Trigger: AGCAGCTCTCACAAGACCCCAGCCTCGTCCTCTTCT...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAAGAAGAGGACGAGGCTaGGGTCTTGTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQRRGRG*GLVRAA
Trigger: AGCAGCTCTCACAAGACCCCAGCCTCGTCCTCTTCT...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCTGTGGCTTTGCTGGATaGCTCAGGGCAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCCGFAG*LRAEED
Trigger: GTCCTCTTCTGCCCTGAGCCATCCAGCAAAGCCACA...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGTCCGTTTGGACCGCCTaGAGGGGCTACCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLSVWTA*RGYQSQ
Trigger: TTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGA...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATACTGGAATCTCCGTTTaGACCGCCTGGAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHTGISV*TAWRGY
Trigger: GTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGT...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTAACTTTGCCACTCCCTaGGTCCCACCACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARNFATP*VPPLES
Trigger: AGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTT...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCTGAAGGAGAGCACATaGACAGGAATAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERLKEST*TGIGTG
Trigger: CCCTGTCCCTATTCCTGTCCATGTGCTCTCCTTCAG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCTGAAGGAGAGCACATaGACAGGAATAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFLKEST*TGIGTG
Trigger: CCCTGTCCCTATTCCTGTCCATGTGCTCTCCTTCAG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTAAGCTGAGAAGCACCTaGCAGACTCTGCGGGATATG +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLKLRST*QTLRDM
Trigger: CATATCCCGCAGAGTCTGCCAGGTGCTTCTCAGCTT...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCAGGTCTCCCAGCTGTaGCTCTGGCCTGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETQVSQL*LWPEFC
Trigger: ACAAAACTCAGGCCAGAGCCACAGCTGGGAGACCTG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTCTGGGACTTGGAATTTaGGGGCCCAGACAACCTTCT +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLLGLGI*GPRQPS
Trigger: AGAAGGTTGTCTGGGCCCCCAAATTCCAAGTCCCAG...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCGAGCCCTGGCTATACTaGGACTTGGAATTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGEPWLY*DLEFGG
Trigger: GCCCCCAAATTCCAAGTCCCAGTATAGCCAGGGCTC...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCGAGCCCTGGCTATACTaGGACTTGGAATTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSEPWLY*DLEFGG
Trigger: GCCCCCAAATTCCAAGTCCCAGTATAGCCAGGGCTC...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCATAACCCCACTGCCTaGAGAGCCCCAGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETHNPTA*RAPGLQ
Trigger: TTGAAGTCCTGGGGCTCTCCAGGCAGTGGGGTTATG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACTGGGCGCTGTACCCTaGGAGTCAGGAGCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKLGAVP*ESGAKS
Trigger: GCTCTTGGCTCCTGACTCCCAGGGTACAGCGCCCAG...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCCTGAGCAGCAAGCAGTTTCCTATCATTaGGAGCCAATCTTCACAATG +
Preference number: 4 (lower is better)
Translates to: RQSCKAQSTGQSAPPEQQAVSYH*EPIFTM
Trigger: CATTGTGAAGATTGGCTCCCAATGATAGGAAACTGC...TTGCTGCTCAGGAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
3UTR CAA 72 bp CACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTaGCCTCTGAAGCGGTCACAATTTCCGTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: HVLIPPRPKWQA*PLKRSQFPWYS
Trigger: GCTGTACCACGGAAATTGTGACCGCTTCAGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS-3UTR TCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCTCTGGGCAGCGTTTGTaGTCTGGTTCAAAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCSGQRL*SGSKRV
Trigger: CACCCTCTTTGAACCAGATCACAAACGCTGCCCAGA...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CTTCTTCTTCTCCTTACTGGCATTGAGGGCTGTGAAGCCGGCTTTGGAAAACTTGCCCTGAGCTTCCGCTaGTGGGACCGCAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLLLTGIEGCEAGFGKLALSFR*WDRNRL
Trigger: AAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGC...AAGTTTTCCAAAGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAAGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR TCA 90 bp AGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCTGCAGGGCAGGAATaGCGCAAGATAGGCATACAC +
Preference number: 4 (lower is better)
Translates to: RRTPSSRKGAVSVHPGRPAAGQE*RKIGIH
Trigger: GTGTATGCCTATCTTGCGTCATTCCTGCCCTGCAGC...AGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCGCCACCAATCTGTCCTaGTGGGACAGAAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCATNLS*WDRNLF
Trigger: AAAAAGGTTTCTGTCCCATCAGGACAGATTGGTGGC...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGTTCTGCCAGAAAATTaGGGGGTGACTGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEVLPEN*GVTAES
Trigger: GCTCTCTGCAGTCACCCCTCAATTTTCTGGCAGAAC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGGCCTGCAGAGCTGACTaGATGTGGCTTTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLACRAD*MWLCWM
Trigger: CATCCAGCAAAGCCACATTCAGTCAGCTCTGCAGGC...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCATGAGCCTGCAGAGCTaGCTGAATGTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSMSLQS*LNVALL
Trigger: CAGCAAAGCCACATTCAGTCAGCTCTGCAGGCTCAT...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCATGAGCCTGCAGAGCTaGCTGAATGTGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTMSLQS*LNVALL
Trigger: CAGCAAAGCCACATTCAGTCAGCTCTGCAGGCTCAT...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCCCCATGTTTGGAGATTaGGCTGGCAAAGGGATTATT +
Preference number: 4 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSPMFGD*AGKGII
Trigger: AATAATCCCTTTGCCAGCTCAATCTCCAAACATGGG...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCGCTGGATTTGTAGGGTaGAGCCATCAAAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSAGFVG*SHQRGA
Trigger: GGCTCCTCTTTGATGGCTTCACCCTACAAATCCAGC...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGCTGGATTTGTAGGGTaGAGCCATCAAAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETAGFVG*SHQRGA
Trigger: GGCTCCTCTTTGATGGCTTCACCCTACAAATCCAGC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACAGCTGGATTTGTAGGGTaGAGCCATCAAAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTAGFVG*SHQRGA
Trigger: GGCTCCTCTTTGATGGCTTCACCCTACAAATCCAGC...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTCAGAGGAGTCAGCGCTaGAGGAGAGCACATGGACAG +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATQRSQR*RRAHGQ
Trigger: CTGTCCATGTGCTCTCCTTCAGCGCTGACTCCTCTG...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATGAGACCTGCACGTTCTaGTTCCACCCAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHETCTF*FHPDPS
Trigger: ACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTC...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR TCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGAGCAGTGGGGTGCTCTaGGGTACTCTGACCAAATGC +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLSSGVL*GTLTKC
Trigger: GCATTTGGTCAGAGTACCTCAGAGCACCCCACTGCT...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGGAGTTTTGTCCGCTTTaGGCACACAGCCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLEFCPL*AHSLGM
Trigger: CATCCCCAGGCTGTGTGCTCAAAGCGGACAAAACTC...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGGAATGTCTATCTGTaGCTTGGGACCCCTGGTATC +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFWNVYL*LGTPGI
Trigger: GATACCAGGGGTCCCAAGTCACAGATAGACATTCCA...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCATACTCTCAACGTGCCTaGTCACTTAGCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPYSQRA*SLSWSS
Trigger: ACTGCTCCAGCTAAGTGATCAGGCACGTTGAGAGTA...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCCCTCTGAATGAAGGATaGGTTACTGGGCGCTGTACC +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSPLNEG*VTGRCT
Trigger: GGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGG...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACACCTCTGAATGAAGGATaGGTTACTGGGCGCTGTACC +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTPLNEG*VTGRCT
Trigger: GGTACAGCGCCCAGTAACTCATCCTTCATTCAGAGG...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGACAGCAAACCTCTGAATaGAGGATGAGTTACTGGGCG +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRQQTSE*RMSYWA
Trigger: CGCCCAGTAACTCATCCTTCATTCAGAGGTTTGCTG...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGCCACTTAGCCCAATGTaGAACACGGATTGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWPLSPM*NTDWFL
Trigger: TAAGAACCAATCCGTGTTTCACATTGGGCTAAGTGG...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGCCTCTGCTTGGCTTTaGGCTCAGCAATACAAATCT +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAASAWL*AQQYKS
Trigger: AGATTTGTATTGCTGAGCTCAAAGCCAAGCAGAGGC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAACTCAGCTCCCGAGTCTaGGCCTCTATGTCTAATAGG +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQLSSRV*ASMSNR
Trigger: CCTATTAGACATAGAGGCGCAGACTCGGGAGCTGAG...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCTCAGCTCCCGAGTCTaGGCCTCTATGTCTAATAGG +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGLSSRV*ASMSNR
Trigger: CCTATTAGACATAGAGGCGCAGACTCGGGAGCTGAG...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACGCAGGGCATCCTTGCTaGAGGGCAGGAATGACGCAA +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYAGHPC*RAGMTQ
Trigger: TTGCGTCATTCCTGCCCTGCAGCAAGGATGCCCTGC...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCTTTGCCTGCGTGTGTaGCTGGCATTCGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHLCLRV*LAFVLV
Trigger: TACCAGGACGAATGCCAGGCACACACGCAGGCAAAG...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCAAATCCGGTCCCTCTaGTCCTTGTCTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARQIRSL*SLSFSS
Trigger: AGAGGAGAAAGACAAGGAGCAGAGGGACCGGATTTG...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGTCCCATTATCCTCCTaGCCCCTTTTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPVPLSS*PLFLHL
Trigger: AAGATGAAGAAAAAGGGGGCAGGAGGATAATGGGAC...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGAACAGAGTTCTGGCCTaGATCCAGCCTTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLNRVLA*IQPLGQ
Trigger: CTGGCCCAAAGGCTGGATGCAGGCCAGAACTCTGTT...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACCGAGGAGGCTGGATTaGGGATCAAGTCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAPRRLD*GSSLHP
Trigger: TGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGG...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTAAATTGAGGGGTGACTaGAGAGAGCTAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSKLRGD*RELAGG
Trigger: ACCACCAGCTAGCTCTCTGCAGTCACCCCTCAATTT...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAACTCCCGAGGAAGAGCTaGCAGAAGAAACCCCATGTT +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQLPRKS*QKKPHV
Trigger: AACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAG...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTCAGACAGCTTTGGGCTaGTGGATTTGTAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLQTALG*WICRVK
Trigger: CTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTG...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTCACAGGTGTGCCAACTaGTCTGCCACCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATHRCAN*SATRAC
Trigger: ACAGGCTCTGGTGGCAGAGCAGTTGGCACACCTGTG...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATATTCACCCACAGGTGTaGCAACTGCTCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHIHPQV*QLLCHQ
Trigger: CTGGTGGCAGAGCAGTTGGCACACCTGTGGGTGAAT...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTGGTACTCTGACCAAATaGCAGGGGATCAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARGTLTK*QGIRQI
Trigger: AATCTGCCTGATCCCCTGGCATTTGGTCAGAGTACC...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACAAGGGCTCTGGGCTCTaGAGTCCACCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYKGSGL*SPPPRT
Trigger: AGTTCGTGGAGGTGGACTGCAGAGCCCAGAGCCCTT...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATGTATTCTGCTCCAGCTaGACGCGCAATGGTACGTGG +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHVFCSS*TRNGTW
Trigger: CCACGTACCATTGCGCGTGCAGCTGGAGCAGAATAC...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAATTCTTCACCAGCTCTaGGTAGAAGAACTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRILHQL*VEELWA
Trigger: TGCCCAGAGTTCTTCTACCCAGAGCTGGTGAAGAAT...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTTCCTCTCCAGGTCCTaGCTCTCCAGTTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARFLSRS*LSSLIF
Trigger: GAAGATCAAACTGGAGAGCCAGGACCTGGAGAGGAA...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATATGCAGCCAATTCCTTaGACACGGCTTCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHMQPIP*TRLPPR
Trigger: CCTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCAT...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAGCCTTTGGGCCTTaGAGCTTATTGGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAEAFGP*SLLANG
Trigger: TCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTTGTGGGAGAAGCCTTTaGGCCTTGGAGCTTATTGGC +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSCGRSL*ALELIG
Trigger: GCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACA...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAACGATGACACTGTGTaGGAGAAGCCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPNDDTV*EKPLGL
Trigger: AAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTT...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TTTGGGGGCCCAGACAACCTTCTAGTCAGGACGGCACAGATAATGATGTGCAAGACTGGAATCTCCGTTTaGACCGCCTGGAGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: FGGPDNLLVRTAQIMMCKTGISV*TAWRGY
Trigger: GTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGT...CTTGCACATCATTATCTGTGCCGTCCTGACTAGAAGGTTGTCTGGGCCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAACTTTGCCACTCCCTaGGTCCCACCACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCNFATP*VPPLES
Trigger: AGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTT...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTACAGCTTTGGGCTGCTaGATTTGTAGGGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLTALGC*ICRVKP
Trigger: TGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGT...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTCGGTCACAATTTCCGTaGTACAGCAGGCCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RRTPSSRKGAVSVHPGRPRSQFP*YSRPFP
Trigger: GGGAAAGGGCCTGCTGTACCACGGAAATTGTGACCG...AGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCGGCTATACTGGGACTTaGAATTTGGGGGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETGYTGT*NLGAQT
Trigger: TGTCTGGGCCCCCAAATTCCAAGTCCCAGTATAGCC...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAACAAAATGGGAGCCCTaGCTATACTGGGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAATKWEP*LYWDLE
Trigger: TTCCAAGTCCCAGTATAGCCAGGGCTCCCATTTTGT...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCATTCAGACTCACCTTGTaGCACAGACCTCACAAGACA +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAFRLTL*HRPHKT
Trigger: TGTCTTGTGAGGTCTGTGCCACAAGGTGAGTCTGAA...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCAGGTCTGCCTTGCCATaGCTGTTCAGTCATTCGCTC +
Preference number: 4 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGRSALP*LFSHSL
Trigger: GAGCGAATGACTGAACAGCCATGGCAAGGCAGACCT...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
3UTR CAA 72 bp GAGAGTCCCTGCTCAGCCTCCACTGCCGGCCTCTGCTaGGCTTTGAGCTCAGCAATACAAATCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: ESPCSASTAGLC*ALSSAIQISSL
Trigger: CAAAGAAGAGATTTGTATTGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGTGGAGGCTGAGCAGGGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAGGAGCCCCTGAGCAGCCTTTTCTTCGTCATTaGAAGGATCTGACAGATCTT +
Preference number: 4 (lower is better)
Translates to: RHCDHPGSLLQPEGAPEQPFLRH*KDLTDL
Trigger: AAGATCTGTCAGATCCTTTCAATGACGAAGAAAAGG...CTGCTCAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGCCACCAATCTGTCCTaGTGGGACAGAAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSATNLS*WDRNLF
Trigger: AAAAAGGTTTCTGTCCCATCAGGACAGATTGGTGGC...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GGTATCCTTGACCCTCAGAGAGATGAAGGGCTCTGGGCTCTGCAGTCCACCTCCCCCATGTTTGGAGATTaGGCTGGCAAAGGGATTATT +
Preference number: 4 (lower is better)
Translates to: GILDPQRDEGLWALQSTSPMFGD*AGKGII
Trigger: AATAATCCCTTTGCCAGCTCAATCTCCAAACATGGG...GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCTCTGAGGGTCAAGGATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGCCCTCAAATCCTTGTaGAACAGCCACTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEALKSL*NSHWLS
Trigger: ACTCAACCAGTGGCTGTTTCACAAGGATTTGAGGGC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACAGCCCTCAAATCCTTGTaGAACAGCCACTGGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTALKSL*NSHWLS
Trigger: ACTCAACCAGTGGCTGTTTCACAAGGATTTGAGGGC...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAAGCCAATCTTCACAATaGCAAAGCTTTTATCAGCTG +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGASQSSQ*QSFYQL
Trigger: CAGCTGATAAAAGCTTTGTCATTGTGAAGATTGGCT...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR TCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTTTAAAGAACCCATGCTaGCAGAGCCTTAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLLKNPC*QSLRPP
Trigger: TGGAGGTCTAAGGCTCTGTCAGCATGGGTTCTTTAA...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR TCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATACAAGCTCATCATACTaGAGATGGGAAACAAACTGT +
Preference number: 4 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYTSSSY*RWETNC
Trigger: ACAGTTTGTTTCCCATCTTCAGTATGATGAGCTTGT...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR GCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGTTCCCAGCTGCTCTaGTATTCAATGCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRSSQLL*YSMQPI
Trigger: AATTGGCTGCATTGAATAGCAGAGCAGCTGGGAACT...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACATTCACCCACAGGTGTaGCAACTGCTCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYIHPQV*QLLCHQ
Trigger: CTGGTGGCAGAGCAGTTGGCACACCTGTGGGTGAAT...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTCTGCTTCTGCCGCACTaGCTAAGAATGATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: HPGRPARSDSTQTQVASLLLLPH*LRMIPK
Trigger: CTTAGGAATCATTCTTAGGCAGTGCGGCAGAAGCAG...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGCTGCTTCTGCCGCACTaGCTAAGAATGATTCCTAAG +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTLLLPH*LRMIPK
Trigger: CTTAGGAATCATTCTTAGGCAGTGCGGCAGAAGCAG...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCTCTCCAAGCTCTTCTaGACATCACCCTTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETLSKLF*TSPFSR
Trigger: TCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGAAAATGAGGGTATTCTaGTCCAGCTGCACGCGCAAT +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTKMRVF*SSCTRN
Trigger: ATTGCGCGTGCAGCTGGAGCAGAATACCCTCATTTT...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCAGCGTTTGTGATCTaGTTCAAAGAGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERAAFVI*FKEGEC
Trigger: ACACTCACCCTCTTTGAACCAGATCACAAACGCTGC...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTTTGATCTTCACCACCTaGCACAGTAGCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSLIFTT*HSSSLI
Trigger: GATCAGGGAGCTACTGTGCCAGGTGGTGAAGATCAA...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTTCCTCTCCAGGTCCTaGCTCTCCAGTTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSFLSRS*LSSLIF
Trigger: GAAGATCAAACTGGAGAGCCAGGACCTGGAGAGGAA...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCAACGATGACACTGTGTaGGAGAAGCCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSNDDTV*EKPLGL
Trigger: AAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTT...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCAACGATGACACTGTGTaGGAGAAGCCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSNDDTV*EKPLGL
Trigger: AAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTT...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TTTGGGGGCCCAGACAACCTTCTAGTCAGGACGGCACAGATAATGATGTGCAAGTGTGGCTTTGCTGGATaGCTCAGGGCAGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FGGPDNLLVRTAQIMMCKCGFAG*LRAEED
Trigger: GTCCTCTTCTGCCCTGAGCCATCCAGCAAAGCCACA...CTTGCACATCATTATCTGTGCCGTCCTGACTAGAAGGTTGTCTGGGCCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCGTTTGGAGATTGAGCTaGCAAAGGGATTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTVWRLS*QRDYSC
Trigger: ACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAAC...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCAACAGAACTCTGGACTaGTGTTCCTCCCGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTNRTLD*CSSRGR
Trigger: TCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTGTT...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTCAGGTCTCCCAGCTGTaGCTCTGGCCTGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATQVSQL*LWPEFC
Trigger: ACAAAACTCAGGCCAGAGCCACAGCTGGGAGACCTG...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAATTCTTATCTCCAGGCTaGAGGCCTTTTACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEFLSPG*RPFTFP
Trigger: AGGGAAGGTAAAAGGCCTTCAGCCTGGAGATAAGAA...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCATTGAAAGGATCTaGCAGATCTTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: CPSNNRLATELQGPEHGAVIERI*QIFLLI
Trigger: GATAAGAAGAAAGATCTGTCAGATCCTTTCAATGAC...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCGTCATCTTCAGACTCTaGTGCTTGTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFVIFRL*CLSKLQ
Trigger: CTGCAGTTTAGACAAGCATCAGAGTCTGAAGATGAC...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGGCAGCTCTGGCAGCCTaGGCCAGCTCCTTAACGCGC +
Preference number: 4 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVAALAA*ASSLTR
Trigger: GCGCGTTAAGGAGCTGGCTCAGGCTGCCAGAGCTGC...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCAAGTCTTCATCCAATaGGTCCTCCAGGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHQVFIQ*VLQVDR
Trigger: CCTGTCAACCTGGAGGACTCATTGGATGAAGACTTG...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACCAAGTCTTCATCCAATaGGTCCTCCAGGTTGACAGG +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNQVFIQ*VLQVDR
Trigger: CCTGTCAACCTGGAGGACTCATTGGATGAAGACTTG...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTATGGAGATGGGGGCGTaGAGTTTTTCTGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATMEMGA*SFSAAE
Trigger: CTCAGCAGCAGAAAAACTTCACGCCCCCATCTCCAT...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAGGCCAGCAAACCTCTaGATGAAGGATGAGTTACTG +
Preference number: 4 (lower is better)
Translates to: KNTKQQKGRSECTSWETCRPANL*MKDELL
Trigger: CAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCT...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGGCCAGCAAACCTCTaGATGAAGGATGAGTTACTG +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGRPANL*MKDELL
Trigger: CAGTAACTCATCCTTCATTCAGAGGTTTGCTGGCCT...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGCCACTTAGCCCAATGTaGAACACGGATTGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTPLSPM*NTDWFL
Trigger: TAAGAACCAATCCGTGTTTCACATTGGGCTAAGTGG...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAATTGGCAACCTTTGCCTaGGTGTGTGCCTGGCATTCG +
Preference number: 4 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKLATFA*VCAWHS
Trigger: CGAATGCCAGGCACACACGCAGGCAAAGGTTGCCAA...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGTCCCATTATCCTCCTaGCCCCTTTTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERVPLSS*PLFLHL
Trigger: AAGATGAAGAAAAAGGGGGCAGGAGGATAATGGGAC...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCATGCTCTGCTATTCAATaGAGCCAATTCCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPCSAIQ*SQFLGH
Trigger: GTGTCCAAGGAATTGGCTGCATTGAATAGCAGAGCA...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGTGCTCTGCTATTCAATaGAGCCAATTCCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERCSAIQ*SQFLGH
Trigger: GTGTCCAAGGAATTGGCTGCATTGAATAGCAGAGCA...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTTCAGAGTTCCCAGCTaGTCTGCTATTCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: QKNTKQQKGRSECTSWETFRVPS*SAIQCS
Trigger: GCTGCATTGAATAGCAGAGCAGCTGGGAACTCTGAA...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATAAAATGAGGGTATTCTaGTCCAGCTGCACGCGCAAT +
Preference number: 4 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDKMRVF*SSCTRN
Trigger: ATTGCGCGTGCAGCTGGAGCAGAATACCCTCATTTT...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCATTCTTCACCAGCTCTaGGTAGAAGAACTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSILHQL*VEELWA
Trigger: TGCCCAGAGTTCTTCTACCCAGAGCTGGTGAAGAAT...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CCTCCAGTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATATTCCATTAATATCCTaGGTGAAGAACTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PPVPAGPELPLMGPQQAYIPLIS*VKNFCL
Trigger: CAGACAGAAGTTCTTCACCCAGGATATTAATGGAAT...ATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAACTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CCA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTATCTCATCATTCCATTaGAACTTCTTCCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSISSFH*NFFRGP
Trigger: GGGACCTCGGAAGAAGTTCCAATGGAATGATGAGAT...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACTTCCTCTCCAGGTCCTaGCTCTCCAGTTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNFLSRS*LSSLIF
Trigger: GAAGATCAAACTGGAGAGCCAGGACCTGGAGAGGAA...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACAGAGCTAGCTGGTGGTaGAGCAGAAGGACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYRASWW*SRRTRL
Trigger: AAGCCTAGTCCTTCTGCTCCACCACCAGCTAGCTCT...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGATTGGCAAATGGAGATaGGGGCGTGAAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTIGKWR*GREVFL
Trigger: CAGAAAAACTTCACGCCCCCATCTCCATTTGCCAAT...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGAAGCCTTTGGGCCTTaGAGCTTATTGGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEEAFGP*SLLANG
Trigger: TCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGACCTTTTCTTCGTCATTaGAAGGATCTGACAGATCTT +
Preference number: 4 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRPFLRH*KDLTDL
Trigger: AAGATCTGTCAGATCCTTTCAATGACGAAGAAAAGG...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACCTCAGAGTTATCGATaGAGGAGTCGGATTCATCAT +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEPQSYR*RSRIHH
Trigger: ATGATGAATCCGACTCCTTCATCGATAACTCTGAGG...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCCTCAGAGTTATCGATaGAGGAGTCGGATTCATCAT +
Preference number: 4 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTPQSYR*RSRIHH
Trigger: ATGATGAATCCGACTCCTTCATCGATAACTCTGAGG...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACCTCAGAGTTATCGATaGAGGAGTCGGATTCATCAT +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAPQSYR*RSRIHH
Trigger: ATGATGAATCCGACTCCTTCATCGATAACTCTGAGG...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAGTCATCTTCAGACTCTaGTGCTTGTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAVIFRL*CLSKLQ
Trigger: CTGCAGTTTAGACAAGCATCAGAGTCTGAAGATGAC...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCGTCATCTTCAGACTCTaGTGCTTGTCTAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSVIFRL*CLSKLQ
Trigger: CTGCAGTTTAGACAAGCATCAGAGTCTGAAGATGAC...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCCCCATGTTTGGAGATTaGGCTGGCAAAGGGATTATT +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSPMFGD*AGKGII
Trigger: AATAATCCCTTTGCCAGCTCAATCTCCAAACATGGG...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp CTTCTTCTTCTCCTTACTGGCATTGAGGGCTGTGAAGCCGGCTTTGGAAAACTTGTCTCGAGAGAGATGTaGCTGTGCTCCTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLLLLTGIEGCEAGFGKLVSREM*LCSSAT
Trigger: AGTGGCAGAGGAGCACAGTCACATCTCTCTCGAGAC...AAGTTTTCCAAAGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAAGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR GCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAGATGCTTGTCTAAACTaGAGGGTTCCCGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPADACLN*RVPELM
Trigger: CATTAACTCGGGAACCCTGCAGTTTAGACAAGCATC...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCGTCCCATTATCCTCCTaGCCCCTTTTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSVPLSS*PLFLHL
Trigger: AAGATGAAGAAAAAGGGGGCAGGAGGATAATGGGAC...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAATGCTCTGCTATTCAATaGAGCCAATTCCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEECSAIQ*SQFLGH
Trigger: GTGTCCAAGGAATTGGCTGCATTGAATAGCAGAGCA...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAAGTTCCCAGCTGCTCTaGTATTCAATGCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQSSQLL*YSMQPI
Trigger: AATTGGCTGCATTGAATAGCAGAGCAGCTGGGAACT...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACCTCTCCAAGCTCTTCTaGACATCACCCTTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYLSKLF*TSPFSR
Trigger: TCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAG...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACACAAGACAGGCAAGTaGCCTCAAATCCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAHKTGK*PQILVK
Trigger: TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTG...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGCTGAACAAAAGATATTaGCTACCCCAGGATAGTAAA +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWLNKRY*LPQDSK
Trigger: TTTACTATCCTGGGGTAGGCAATATCTTTTGTTCAG...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR GCA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCATTCAGAGATAGTCACTaGTTAGCATACTTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAFRDSH*LAYFQS
Trigger: AGACTGGAAGTATGCTAAGCAGTGACTATCTCTGAA...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR CCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTTGGGTAGAAGAACTCTaGGCAGCGTTTGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATWVEEL*AAFVIW
Trigger: CCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCA...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACATTCTTCACCAGCTCTaGGTAGAAGAACTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNILHQL*VEELWA
Trigger: TGCCCAGAGTTCTTCTACCCAGAGCTGGTGAAGAAT...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AAGGGAAAGGAAGGAGGGCCTGGGACCCGGGTGTTTATGGGCAGAGAAGCCTGGATTCCATTAATATCCTaGGTGAAGAACTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KGKEGGPGTRVFMGREAWIPLIS*VKNFCL
Trigger: CAGACAGAAGTTCTTCACCCAGGATATTAATGGAAT...CCAGGCTTCTCTGCCCATAAACACCCGGGTCCCAGGCCCTCCTTCCTTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCAATCTCATCATTCCATTaGAACTTCTTCCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAISSFH*NFFRGP
Trigger: GGGACCTCGGAAGAAGTTCCAATGGAATGATGAGAT...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTATTGGCAAATGGAGATaGGGGCGTGAAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSIGKWR*GREVFL
Trigger: CAGAAAAACTTCACGCCCCCATCTCCATTTGCCAAT...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp TTTGGGGGCCCAGACAACCTTCTAGTCAGGACGGCACAGATAATGATGTGCAAGACAGCTTTGGGCTGCTaGATTTGTAGGGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FGGPDNLLVRTAQIMMCKTALGC*ICRVKP
Trigger: TGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGT...CTTGCACATCATTATCTGTGCCGTCCTGACTAGAAGGTTGTCTGGGCCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGTCTGCGGGATATGGGTaGGCACCGCAGCGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVSAGYG*APQRVG
Trigger: TCCCACACGCTGCGGTGCCCACCCATATCCCGCAGA...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACACAAAATGGGAGCCCTaGCTATACTGGGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNTKWEP*LYWDLE
Trigger: TTCCAAGTCCCAGTATAGCCAGGGCTCCCATTTTGT...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCTGGAAAAACAAAATaGGAGCCCTGGCTATACTGG +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTSGKTK*EPWLYW
Trigger: CCAGTATAGCCAGGGCTCCCATTTTGTTTTTCCAGA...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp TTTGGGGGCCCAGACAACCTTCTAGTCAGGACGGCACAGATAATGATGTGCAAGTTCTTATCTCCAGGCTaGAGGCCTTTTACCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FGGPDNLLVRTAQIMMCKFLSPG*RPFTFP
Trigger: AGGGAAGGTAAAAGGCCTTCAGCCTGGAGATAAGAA...CTTGCACATCATTATCTGTGCCGTCCTGACTAGAAGGTTGTCTGGGCCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp AGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGATGCTTGTCTAAACTaGAGGGTTCCCGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: RRTPSSRKGAVSVHPGRPDACLN*RVPELM
Trigger: CATTAACTCGGGAACCCTGCAGTTTAGACAAGCATC...AGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACCACAAGACAGGCAAGTaGCCTCAAATCCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNHKTGK*PQILVK
Trigger: TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTG...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp CTTCTTCTTCTCCTTACTGGCATTGAGGGCTGTGAAGCCGGCTTTGGAAAACTTGTGACTGTGCTCCTCTaGCACTTCCAAGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: LLLLLTGIEGCEAGFGKLVTVLL*HFQEHA
Trigger: AGCATGCTCTTGGAAGTGGCAGAGGAGCACAGTCAC...AAGTTTTCCAAAGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAAGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR GCA 90 bp CTTCTTCTTCTCCTTACTGGCATTGAGGGCTGTGAAGCCGGCTTTGGAAAACTTGTCAGCTCCAAGTTCTaGTTCTGCAGTCCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLLLTGIEGCEAGFGKLVSSKF*FCSPKV
Trigger: CACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGAC...AAGTTTTCCAAAGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAAGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CCA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATATTGGCAAATGGAGATaGGGGCGTGAAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHIGKWR*GREVFL
Trigger: CAGAAAAACTTCACGCCCCCATCTCCATTTGCCAAT...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCGTTTGGAGATTGAGCTaGCAAAGGGATTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFVWRLS*QRDYSC
Trigger: ACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAAC...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAGTTTGGAGATTGAGCTaGCAAAGGGATTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRVWRLS*QRDYSC
Trigger: ACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAAC...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGGTCATTGAAAGGATCTaGCAGATCTTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: NTKQQKGRSECTSWETCTVIERI*QIFLLI
Trigger: GATAAGAAGAAAGATCTGTCAGATCCTTTCAATGAC...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR TCA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTCCTTTTCTTCGTCATTaGAAGGATCTGACAGATCTT +
Preference number: 4 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSPFLRH*KDLTDL
Trigger: AAGATCTGTCAGATCCTTTCAATGACGAAGAAAAGG...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACACTTCTTTGGCTCTTTTaGTACTACCTAAGACTACTC +
Preference number: 4 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTLLWLF*YYLRLL
Trigger: GAGTAGTCTTAGGTAGTAGCAAAAGAGCCAAAGAAG...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCGGCTTTGGAAAACTTaGACTTTTTCGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARRLWKT*TFSISS
Trigger: AGAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCG...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCATTCCATTAATATCCTaGGTGAAGAACTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TKQQKGRSECTSWETCTFIPLIS*VKNFCL
Trigger: CAGACAGAAGTTCTTCACCCAGGATATTAATGGAAT...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACTCTGGAAAAACAAAATaGGAGCCCTGGCTATACTGG +
Preference number: 4 (lower is better)
Translates to: LACRSALPWLFSHSLFHYSGKTK*EPWLYW
Trigger: CCAGTATAGCCAGGGCTCCCATTTTGTTTTTCCAGA...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGGGACCCGGGTGTTTATaGGCAGAGAAGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVGPGCL*AEKPGE
Trigger: CTCTCCAGGCTTCTCTGCCCATAAACACCCGGGTCC...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCTGGGCCAGAGGGGCTTaGCTTCCGCATCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: IALYKINNLHTTPNTNIVWARGA*LPHPES
Trigger: GCTTTCTGGATGCGGAAGTCAAGCCCCTCTGGCCCA...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCGGGTCTTGTGAGAGCTaGTGCTGGAGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: IALYKINNLHTTPNTNIVGSCES*CWRLTG
Trigger: GCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGACCC...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACCTTCTTTGGCTCTTTTaGTACTACCTAAGACTACTC +
Preference number: 4 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNLLWLF*YYLRLL
Trigger: GAGTAGTCTTAGGTAGTAGCAAAAGAGCCAAAGAAG...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACTTAGCGGGTGTCACTaGATGGCTTCTGTTAACATT +
Preference number: 4 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKLSGCH*MASVNI
Trigger: AATGTTAACAGAAGCCATGCAGTGACACCCGCTAAG...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR CCA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCGGCTTTGGAAAACTTaGACTTTTTCGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGRLWKT*TFSISS
Trigger: AGAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCG...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCCGGCTTTGGAAAACTTaGACTTTTTCGATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSRLWKT*TFSISS
Trigger: AGAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCG...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CCA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCATTCCATTAATATCCTaGGTGAAGAACTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSIPLIS*VKNFCL
Trigger: CAGACAGAAGTTCTTCACCCAGGATATTAATGGAAT...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR GCA 90 bp CTTCTTCTTCTCCTTACTGGCATTGAGGGCTGTGAAGCCGGCTTTGGAAAACTTGATGCTTGTCTAAACTaGAGGGTTCCCGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: LLLLLTGIEGCEAGFGKLDACLN*RVPELM
Trigger: CATTAACTCGGGAACCCTGCAGTTTAGACAAGCATC...AAGTTTTCCAAAGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAAGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CCA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGTTCCACCGAGGAGGCTaGATTGCGGATCAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVFHRGG*IADQVF
Trigger: GAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAA...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCAGAGATGAAGGGCTCTaGGCTCTGCAGTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: IALYKINNLHTTPNTNIVRDEGL*ALQSTS
Trigger: GGAGGTGGACTGCAGAGCCCAGAGCCCTTCATCTCT...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR TCA 90 bp GCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAACAGCCACTGTCATTGAAAGGATCTaGCAGATCTTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: AQTSQDRQVPSNPCETATVIERI*QIFLLI
Trigger: GATAAGAAGAAAGATCTGTCAGATCCTTTCAATGAC...AGTGGCTGTTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR GCA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCCAGACAGCTTTGGGCTaGTGGATTTGTAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IALYKINNLHTTPNTNIVQTALG*WICRVK
Trigger: CTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTG...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CCA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGGCGGGTGTCACTGCATaGCTTCTGTTAACATTGAAA +
Preference number: 4 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVAGVTA*LLLTLK
Trigger: TTTCAATGTTAACAGAAGCCATGCAGTGACACCCGC...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS GCA 90 bp CGCCTCGGCCCATGGCCGGGTCCCCGAGCCCAGGGGAGCCTGGTGTaGCGCGCCGCGCGCCGGCCCAGGAGGAAGCGAAGAAATGCCAAC +
Preference number: 5 (lower is better)
Translates to: RLGPWPGPRAQGSLV*RAARRPRRKRRNAN
Trigger: GTTGGCATTTCTTCGCTTCCTCCTGGGCCGGCGCGCGGCGCGGCACACCAGGCTCCCCTGGGCTCGGGGACCCGGCCATGGGCCGAGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS TCA 90 bp GCCAAGCAGAGTTGCCGGGCGCGGGAGCCCAGACCCGGCGGAGGCTaGGTTCCAGGCCGCGCCGAGCTCCGTCAGGGTAGCTCACTGGCG +
Preference number: 5 (lower is better)
Translates to: AKQSCRAREPRPGGG*VPGRAELRQGSSLA
Trigger: CGCCAGTGAGCTACCCTGACGGAGCTCGGCGCGGCCTGGAACTCAGCCTCCGCCGGGTCTGGGCTCCCGCGCCCGGCAACTCTGCTTGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS GCA 90 bp CGTCACGTGGTCGGGCCCACTCCAATGGGCGGCGCCGGGGCGACTTaGTGTTCCCGGCGGCCCGTGCGTCGGCGGTGGTTGGGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: RHVVGPTPMGGAGAT*CSRRPVRRRWLGGK
Trigger: CTTACCACCCAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGCCCCGGCGCCGCCCATTGGAGTGGGCCCGACCACGTGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 90 bp TTCGTTGTCACGAGCCGAAGGGAGGGGGAAGGAGCCGGGAGTCTCTaGGCTCCGGCGCGCGGAGACCGCGGCGCTCGCGTCACGTGCCCC +
Preference number: 5 (lower is better)
Translates to: FVVTSRREGEGAGSL*APARGDRGARVTCP
Trigger: GGGGCACGTGACGCGAGCGCCGCGGTCTCCGCGCGCCGGAGCGCAGAGACTCCCGGCTCCTTCCCCCTCCCTTCGGCTCGTGACAACGAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 90 bp GAGGCTGAGTTCCAGGCCGCGCCGAGCTCCGTCAGGGTAGCTCACTaGCGCTGCGACGGGGCCGACCAGCGCCTCGGGCTCGGGAATGGC +
Preference number: 5 (lower is better)
Translates to: EAEFQAAPSSVRVAH*RCDGADQRLGLGNG
Trigger: GCCATTCCCGAGCCCGAGGCGCTGGTCGGCCCCGTCGCAGCGCCAGTGAGCTACCCTGACGGAGCTCGGCGCGGCCTGGAACTCAGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS CCA 90 bp GGCGCCGGGGCGACTTGCTGTTCCCGGCGGCCCGTGCGTCGGCGGTaGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGAC +
Preference number: 5 (lower is better)
Translates to: GAGATCCSRRPVRRR*LGGKMAAVSLRLGD
Trigger: GTCGCCGAGCCGCAGACTCACAGCCGCCATCTTACCACCCAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGCCCCGGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 90 bp CCTGGTGTGCCGCGCCGCGCGCCGGCCCAGGAGGAAGCGAAGAAATaGCAACTCGACGTCCGCGCAGCCACTCCGGGGACACCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: PGVPRRAPAQEEAKK*QLDVRAATPGTPGG
Trigger: ACCCCCTGGTGTCCCCGGAGTGGCTGCGCGGACGTCGAGTTGGCATTTCTTCGCTTCCTCCTGGGCCGGCGCGCGGCGCGGCACACCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS CCA 90 bp CGACCAATGATCCCCGGCGGGCGCGGTGACGTCAGAGTAGCGGCGTaGCCAGTGACAGCCGGCCCCCGTCACGTGGTCGGGCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: RPMIPGGRGDVRVAA*PVTAGPRHVVGPTP
Trigger: TGGAGTGGGCCCGACCACGTGACGGGGGCCGGCTGTCACTGGCCACGCCGCTACTCTGACGTCACCGCGCCCGCCGGGGATCATTGGTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS TCA 90 bp GGCGGCCCGTGCGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTaGGTCTGCGGCTCGGCGACTTGGTGTGGTGAGTCCGAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: GGPCVGGGWVVRWRL*VCGSATWCGESERP
Trigger: CGGCCGCTCGGACTCACCACACCAAGTCGCCGAGCCGCAGACTCACAGCCGCCATCTTACCACCCAACCACCGCCGACGCACGGGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS TCA 90 bp GGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGTaGGTCCGAGCGGCCGGGCCAACCGAGACGCGCCGGGGAGCTACC +
Preference number: 5 (lower is better)
Translates to: GKMAAVSLRLGDLVW*VRAAGPTETRRGAT
Trigger: GGTAGCTCCCCGGCGCGTCTCGGTTGGCCCGGCCGCTCGGACTCACCACACCAAGTCGCCGAGCCGCAGACTCACAGCCGCCATCTTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 90 bp CGGACCTGCGAGATCTGGCCGGTGCCATTCGGTCAAAGCCCAGGTTaGGATGCAGCCGACCTGTGCGGCCGGCTCAGCCGGGGTTGTCTA +
Preference number: 5 (lower is better)
Translates to: RTCEIWPVPFGQSPG*DAADLCGRLSRGCL
Trigger: TAGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 90 bp ATTACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTaGGAGAGGCGCTGCATGGGGCGGGCTGGAGTGCAAGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ITWQTLRDMGGHRSV*ERRCMGRAGVQASQ
Trigger: CTGGCTGGCTTGCACTCCAGCCCGCCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS TCA 90 bp GAGAGGGCAAAGGCACACGGTGCGCGTGGCACACTGACCGTCGGGTaGTTACCTGGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCG +
Preference number: 5 (lower is better)
Translates to: ERAKAHGARGTLTVG*LPGRLCGIWVGTAA
Trigger: CGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCGTGTGCCTTTGCCCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS GCA 90 bp CCGGTGCCATTCGGTCAAAGCCCAGGTTGCGATGCAGCCGACCTGTaGGGCCGGCTCAGCCGGGGTTGTCTAAACCGGACTGCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: PVPFGQSPGCDAADL*GRLSRGCLNRTAGV
Trigger: AACGCCAGCAGTCCGGTTTAGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 90 bp CTGCGAGATCTGGCCGGTGCCATTCGGTCAAAGCCCAGGTTGCGATaGAGCCGACCTGTGCGGCCGGCTCAGCCGGGGTTGTCTAAACCG +
Preference number: 5 (lower is better)
Translates to: LRDLAGAIRSKPRLR*SRPVRPAQPGLSKP
Trigger: CGGTTTAGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 90 bp CAGAAAGCAGAAGCGCCGGGGACCGGACCTGCGAGATCTGGCCGGTaGCATTCGGTCAAAGCCCAGGTTGCGATGCAGCCGACCTGTGCG +
Preference number: 5 (lower is better)
Translates to: QKAEAPGTGPARSGR*HSVKAQVAMQPTCA
Trigger: CGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCGGTCCCCGGCGCTTCTGCTTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 90 bp GGCTTCCCAGAAAGCAGAAGCGCCGGGGACCGGACCTGCGAGATCTaGCCGGTGCCATTCGGTCAAAGCCCAGGTTGCGATGCAGCCGAC +
Preference number: 5 (lower is better)
Translates to: GFPESRSAGDRTCEI*PVPFGQSPGCDAAD
Trigger: GTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCGGTCCCCGGCGCTTCTGCTTTCTGGGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS-3UTR CAA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCATGCGGCCAAGCAGAGTaGCCGGGCGCGGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQACGQAE*PGAGAQ
Trigger: CTGGGCTCCCGCGCCCGGCAACTCTGCTTGGCCGCA...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CAA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGTCGCCCCAGGAGAACTaGCGGCGCGGGACCCCGCGC +
Preference number: 5 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERSPQEN*RRGTPR
Trigger: GCGCGGGGTCCCGCGCCGCAAGTTCTCCTGGGGCGA...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CAA 90 bp GTGGAAGGACCCGGGGGCAGGGCCTGTGACGATGGCATCCTTGGAGACCCCTGCCACTGGAATCTCCGTTaGGACCGCCTGGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: VEGPGGRACDDGILGDPCHWNLR*DRLEGL
Trigger: TAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTG...GCAGGGGTCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCGGGTCCTTCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589191.1
CDS GCA 90 bp GGACCCGGGGGCAGGGCCTGTGACGATGGCATCCTTGGAGACCCCTaGTTTGGCAGAGGAGTCAGCGCTGAAGGAGAGCACATGGACAGG +
Preference number: 5 (lower is better)
Translates to: GPGGRACDDGILGDP*FGRGVSAEGEHMDR
Trigger: CCTGTCCATGTGCTCTCCTTCAGCGCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586152.1
ENST00000590769.5
CDS CCA 90 bp TCCTCCAGGTTGACAGGAGGAGGGTTAGCAAGGCCGCCCGATGCCTaGGATGGGAGCTCCCTGCTCGAGGCCCCAATACTCAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSRLTGGGLARPPDA*DGSSLLEAPILRPP
Trigger: AGGAGGCCTGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTCCTGTCAACCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 90 bp AAAGGCACACGGTGCGCGTGGCACACTGACCGTCGGGTGATTACCTaGCAGACTCTGCGGGATATGGGTGGGCACCGCAGCGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: KGTRCAWHTDRRVIT*QTLRDMGGHRSVWE
Trigger: CTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCGTGTGCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS-3UTR CAA 90 bp CCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACACCGCGGGCGCTTCGTaGTCACGAGCCGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: PSMGGTSEVPRSAPLRTHTAGAS*SRAEGR
Trigger: CCTCCCTTCGGCTCGTGACAACGAAGCGCCCGCGGT...GTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CAA 90 bp CAGCAAGGGCCCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCGCATCTTGGCAACCTTaGCCTGCGTGTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: QQGPGSLHGRHIRSAEKRASWQP*PACVPG
Trigger: GCCAGGCACACACGCAGGCAAAGGTTGCCAAGATGC...GCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGCCCTTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCCACAGGAACTGCCACTaGGGGCCCGTGAGACGTCCG +
Preference number: 5 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTHRNCH*GPVRRP
Trigger: CGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTG...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCGTGACGATGGCATCCTaGGAGACCCCTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGVTMAS*ETPALA
Trigger: TGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCAC...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS GCA 90 bp TTGGGACGGGTCGGCTGGTGGCCTGTCCCACGGAGGGAGGCTGTATaGCAGGGACCAGGCTCCCAGAAACAGAACTCTGGACTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LGRVGWWPVPRREAV*QGPGSQKQNSGLVF
Trigger: GAACACCAGTCCAGAGTTCTGTTTCTGGGAGCCTGGTCCCTGGCATACAGCCTCCCTCCGTGGGACAGGCCACCAGCCGACCCGTCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 90 bp CAGGTTGACAGGAGGAGGGTTAGCAAGGCCGCCCGATGCCTGGGATaGGAGCTCCCTGCTCGAGGCCCCAATACTCAGGCCTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: QVDRRRVSKAARCLG*ELPARGPNTQASCL
Trigger: CAAACAGGAGGCCTGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTCCTGTCAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 90 bp GCAGAGGGCTTTAGGGACGGCGAGGTCAGCAACTTTGCCACTCCCTaGGTCCCACCACTGGAATCTCCGTTTGGACCGCCTGGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: AEGFRDGEVSNFATP*VPPLESPFGPPGGA
Trigger: AGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGCCGTCCCTAAAGCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS CCA 90 bp GGCAAAGCACCTAGGGGTGGAGAGGGCAAAGGCACACGGTGCGCGTaGCACACTGACCGTCGGGTGATTACCTGGCAGACTCTGCGGGAT +
Preference number: 5 (lower is better)
Translates to: GKAPRGGEGKGTRCA*HTDRRVITWQTLRD
Trigger: ATCCCGCAGAGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCGTGTGCCTTTGCCCTCTCCACCCCTAGGTGCTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS-3UTR CAA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTGCATCTTGGCAACCTTaGCCTGCGTGTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRAASWQP*PACVPG
Trigger: GCCAGGCACACACGCAGGCAAAGGTTGCCAAGATGC...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTTTTTCCCTGCTGAACTaGGGACGGGTCGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRAFSLLN*GRVGWW
Trigger: CCACCAGCCGACCCGTCCCAAGTTCAGCAGGGAAAA...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS GCA 90 bp TCTTGTTGGGGCTTCCCAGAAAGCAGAAGCGCCGGGGACCGGACCTaGGAGATCTGGCCGGTGCCATTCGGTCAAAGCCCAGGTTGCGAT +
Preference number: 5 (lower is better)
Translates to: SCWGFPESRSAGDRT*EIWPVPFGQSPGCD
Trigger: ATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCGGTCCCCGGCGCTTCTGCTTTCTGGGAAGCCCCAACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 90 bp TGCGCCTCTATGCTGAGCCAGCTCCTTAACGCGCTTCTCCAGGGGTaGTGGCAGGCCTTCGGGGAGAGAAGAGGGCTGCCTGAATTCCTG +
Preference number: 5 (lower is better)
Translates to: CASMLSQLLNALLQG*WQAFGERRGLPEFL
Trigger: CAGGAATTCAGGCAGCCCTCTTCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGCGTTAAGGAGCTGGCTCAGCATAGAGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585857.1
CDS-3UTR CAA 90 bp CAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAGTCTGCACCTCAGTTTCCGAGCACGCTaGAGCAGGGCATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QPSSDRAARPRARGSLHLSFRAR*SRASLL
Trigger: CAGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAACT...GAGGTGCAGACTGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CAGCAAGGGCCCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCGGACCCCTGGTATCCTaGACCCTCAGAGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: QQGPGSLHGRHIRSAEKRGPLVS*TLREMK
Trigger: CTTCATCTCTCTGAGGGTCAAGGATACCAGGGGTCC...GCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGCCCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS TCA 90 bp CGAGCTCATGGCCCCAGACAGCTTTGGGCTGCTGGATTTGTAGGGTaGAGCCATCAAAGAGGAGCCGGCCAGCAGCACAGTCCCACTCGC +
Preference number: 5 (lower is better)
Translates to: RAHGPRQLWAAGFVG*SHQRGAGQQHSPTR
Trigger: GCGAGTGGGACTGTGCTGCTGGCCGGCTCCTCTTTGATGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTGGGGCCATGAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 90 bp GGGGCCAGGCACAGGAACTGCCACTTGGGGCCCGTGAGACGTCCGTaGCAAGCTGTGGTGCTTAGCTTTGGACTGATGTACTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GARHRNCHLGPVRRP*QAVVLSFGLMYFWQ
Trigger: CTGCCAGAAGTACATCAGTCCAAAGCTAAGCACCACAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTGCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS-3UTR CAA 90 bp CCTGTAAACACTGTGCCTCCCACCACGGCCCAGCGCAAGCCCCAGCCTAGAGCTTTCTCCTTACTGGCATaGAGGGCTGTGAAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: PVNTVPPTTAQRKPQPRAFSLLA*RAVKPA
Trigger: AGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAA...AGCTCTAGGCTGGGGCTTGCGCTGGGCCGTGGTGGGAGGCACAGTGTTTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCTCTGGCAGGCCCTTATaGAGGGGAGCCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSSGRPL*RGAWQD
Trigger: GTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAGA...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAGCGAGGTCAGCAACTTaGCCACTCCCTGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRARSAT*PLPGSH
Trigger: GTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGC...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGCGAGGTCAGCAACTTaGCCACTCCCTGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEARSAT*PLPGSH
Trigger: GTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGC...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS TCA 90 bp GGGAGCTCCCTGCTCGAGGCCCCAATACTCAGGCCTCCTGTTTGGTaGTCTGAGGGCAAAGCAATGGGGCCACCAATCTGTCCTGATGGG +
Preference number: 5 (lower is better)
Translates to: GSSLLEAPILRPPVW*SEGKAMGPPICPDG
Trigger: CCCATCAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCTGAGTATTGGGGCCTCGAGCAGGGAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS-3UTR CAA 90 bp TGCTCTGCCCCACCCTCTGCTGCGGCCTCGCCTGTAGGTCTGCCTTGCCATGGCGCTGTGAAGCCGGCTTaGGAAAACTTGGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: CSAPPSAAASPVGLPCHGAVKPA*ENLDFF
Trigger: GAAAAAGTCCAAGTTTTCCAAAGCCGGCTTCACAGC...GCCATGGCAAGGCAGACCTACAGGCGAGGCCGCAGCAGAGGGTGGGGCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAGGAGCCCCTGAGCAGTCTTCTTGGCCAGGATaGAAGTCAGGTGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: RHCDHPGSLLQPEGAPEQSSWPG*KSGAHG
Trigger: GCCATGGGCACCTGACTTCAATCCTGGCCAAGAAGA...CTGCTCAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGATCTGGCAGGCCCTTATaGAGGGGAGCCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRSGRPL*RGAWQD
Trigger: GTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAGA...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTCACAGGAACTGCCACTaGGGGCCCGTGAGACGTCCG +
Preference number: 5 (lower is better)
Translates to: ENSRSSRRTPSSRKGAVSHRNCH*GPVRRP
Trigger: CGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTG...ACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCACAGGAACTGCCACTaGGGGCCCGTGAGACGTCCG +
Preference number: 5 (lower is better)
Translates to: QKNTKQQKGRSECTSWETHRNCH*GPVRRP
Trigger: CGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGGGCCTTGGAGCTTATaGGCAAATGGAGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPGPWSL*ANGDGG
Trigger: GCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCC...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACACTGGAATCTCCGTTaGGACCGCCTGGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAHWNLR*DRLEGL
Trigger: TAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTGCGAGGTCAGCAACTTaGCCACTCCCTGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARARSAT*PLPGSH
Trigger: GTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGC...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp GGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCTGGCTATACTGGGACTaGGAATTTGGGGGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GRHIRSAEKRSAENSRSSWLYWD*EFGGPD
Trigger: GTCTGGGCCCCCAAATTCCAAGTCCCAGTATAGCCA...GGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAGGGCGGACAGAGGTCTaGCTCCTTGGGAAACCGGGA +
Preference number: 5 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRGRTEV*LLGKPG
Trigger: TCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCCC...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CGGCACTGTGACCATCCAGGGAGCTTACTGCAGCCAGAAGGAGCCCCTGAGCAGGCCTGTAGGTCTGCCTaGCCATGGCTGTTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: RHCDHPGSLLQPEGAPEQACRSA*PWLFSH
Trigger: ATGACTGAACAGCCATGGCAAGGCAGACCTACAGGC...CTGCTCAGGGGCTCCTTCTGGCTGCAGTAAGCTCCCTGGATGGTCACAGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS TCA 90 bp GGCTTCCACCGAGGAGGCTGGATTGCGGATCAAGTCTTCATCCAATaGGTCCTCCAGGTTGACAGGAGGAGGGTTAGCAAGGCCGCCCGA +
Preference number: 5 (lower is better)
Translates to: GFHRGGWIADQVFIQ*VLQVDRRRVSKAAR
Trigger: TCGGGCGGCCTTGCTAACCCTCCTCCTGTCAACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS-3UTR CAA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTGCCTGGAGCAAGTCGTaGTCAGAAGTAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPAWSKS*SEVEPK
Trigger: CTTTGGCTCTACTTCTGACAACGACTTGCTCCAGGC...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CAA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAGCATCTTGGCAACCTTaGCCTGCGTGTGTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRASWQP*PACVPG
Trigger: GCCAGGCACACACGCAGGCAAAGGTTGCCAAGATGC...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGACAAGCCTGGGCTTTGTaGTTCCTCTCCAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRQAWAL*FLSRSW
Trigger: CCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTG...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGTCTGGCAGGCCCTTATaGAGGGGAGCCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGSGRPL*RGAWQD
Trigger: GTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAGA...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCGGGCCTTGGAGCTTATaGGCAAATGGAGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCGPWSL*ANGDGG
Trigger: GCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCC...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAAGAAGCCTTTGGGCCTaGGAGCTTATTGGCAAATGG +
Preference number: 5 (lower is better)
Translates to: PAPSMGGTSEVPRSAPLRRSLWA*ELIGKW
Trigger: CCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCT...TCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CAGCAAGGGCCCGGCTCCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCCCCCATGTTTGGAGATaGAGCTGGCAAAGGGATTAT +
Preference number: 5 (lower is better)
Translates to: QQGPGSLHGRHIRSAEKRPHVWR*SWQRDY
Trigger: ATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGG...GCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGGAGCCGGGCCCTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCGAGGTCAGCAACTTaGCCACTCCCTGGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWARSAT*PLPGSH
Trigger: GTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGC...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGTGACGATGGCATCCTaGGAGACCCCTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAAVTMAS*ETPALA
Trigger: TGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCAC...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp GCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCACTGGGACTTGGAATTaGGGGGCCCAGACAACCTTC +
Preference number: 5 (lower is better)
Translates to: AEKRSAENSRSSRRTPSSTGTWN*GAQTTF
Trigger: GAAGGTTGTCTGGGCCCCCAAATTCCAAGTCCCAGT...GCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGGGCGGACAGAGGTCTaGCTCCTTGGGAAACCGGGA +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEGRTEV*LLGKPG
Trigger: TCCCGGTTTCCCAAGGAGCAAGACCTCTGTCCGCCC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS CCA 90 bp CTCCTCCTTCCGGGACTTCTTCAAAAACGCAGGATTCAGGGAACCTaGGAGAGAGGTGAACTGGACCCTGTGGGGCTCCGACATGGCTAC +
Preference number: 5 (lower is better)
Translates to: LLLPGLLQKRRIQGT*ERGELDPVGLRHGY
Trigger: GTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCACCTCTCTCCCAGGTTCCCTGAATCCTGCGTTTTTGAAGAAGTCCCGGAAGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS-3UTR CAA 90 bp TTTGGGGGCCCAGACAACCTTCTAGTCAGGACGGCACAGATAATGATGTGCAAGCACTGCATGGCTTCTTaGTCCCCAGCGCCGACGCGG +
Preference number: 5 (lower is better)
Translates to: FGGPDNLLVRTAQIMMCKHCMAS*SPAPTR
Trigger: CCGCGTCGGCGCTGGGGACAAAGAAGCCATGCAGTG...CTTGCACATCATTATCTGTGCCGTCCTGACTAGAAGGTTGTCTGGGCCCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262376.11
CDS-3UTR CAA 90 bp GGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCTTCTCCTTACTGGCATaGAGGGCTGTGAAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GAVSVHPGRPARSDSTQTFSLLA*RAVKPA
Trigger: AGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAA...GGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAATTCTCCTTACTGGCATaGAGGGCTGTGAAGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GTSEVPRSAPLRTHAPPEFSLLA*RAVKPA
Trigger: AGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGAA...TTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTAGTTTCCGAGCACGCTaGAGCAGGGCATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSSFRAR*SRASLL
Trigger: CAGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAACT...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTTCCTCTTCCAGCATCTaGGCAACCTTTGCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: GRPARSDSTQTQVASLASSSSSI*ATFACV
Trigger: CACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGGA...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAAATGCAGCCAATTCCTaGGACACGGCTTCCACCGAG +
Preference number: 5 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQANAANS*DTASTE
Trigger: CTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCATT...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTGGGCCTTGGAGCTTATaGGCAAATGGAGATGGGGGC +
Preference number: 5 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARGPWSL*ANGDGG
Trigger: GCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCC...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAATTTTCCCTGCTGAACTaGGGACGGGTCGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQFSLLN*GRVGWW
Trigger: CCACCAGCCGACCCGTCCCAAGTTCAGCAGGGAAAA...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACACACTGGAATCTCCGTTaGGACCGCCTGGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTHWNLR*DRLEGL
Trigger: TAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTG...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCCCCAAGTGGCAAGCCTaGCCTCTGAAGCGGTCACAA +
Preference number: 5 (lower is better)
Translates to: TKQQKGRSECTSWETCTFPKWQA*PLKRSQ
Trigger: TTGTGACCGCTTCAGAGGCAAGGCTTGCCACTTGGG...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCACTGGGACTTGGAATTaGGGGGCCCAGACAACCTTC +
Preference number: 5 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCTGTWN*GAQTTF
Trigger: GAAGGTTGTCTGGGCCCCCAAATTCCAAGTCCCAGT...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGATGGCTATACTGGGACTaGGAATTTGGGGGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RHIRSAEKRSAENSRSSRWLYWD*EFGGPD
Trigger: GTCTGGGCCCCCAAATTCCAAGTCCCAGTATAGCCA...TCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp TGCCCCTCTAACAACCGTCTAGCGACAGAGCTGCAAGGCCCAGAGCACGGGGCAATGTCTATCTGTGACTaGGGACCCCTGGTATCCTTG +
Preference number: 5 (lower is better)
Translates to: CPSNNRLATELQGPEHGAMSICD*GPLVSL
Trigger: CAAGGATACCAGGGGTCCCAAGTCACAGATAGACAT...TGCCCCGTGCTCTGGGCCTTGCAGCTCTGTCGCTAGACGGTTGTTAGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS TCA 90 bp CCCTGGCCTTTGGCCGCTGTCTTCACTAACTGCAGGAGGGAACGATaGCACTGTGTGGGAGAAGCCTTTGGGCCTTGGAGCTTATTGGCA +
Preference number: 5 (lower is better)
Translates to: PWPLAAVFTNCRRER*HCVGEAFGPWSLLA
Trigger: TGCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTTCCCTCCTGCAGTTAGTGAAGACAGCGGCCAAAGGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS GCA 90 bp GCGTTTGTGATCTGGTTCAAAGAGGGTGAGTGTAATCCGAACAGCTaGTGCAGCCGGCTCACAGTCCTGATGCTGTTCTCCTGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: AFVIWFKEGECNPNS*CSRLTVLMLFSCPS
Trigger: GCTGGGGCAGGAGAACAGCATCAGGACTGTGAGCCGGCTGCAGCAGCTGTTCGGATTACACTCACCCTCTTTGAACCAGATCACAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS-3UTR CAA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCGCCTGGAGCAAGTCGTaGTCAGAAGTAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCAWSKS*SEVEPK
Trigger: CTTTGGCTCTACTTCTGACAACGACTTGCTCCAGGC...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCAGTTTCCGAGCACGCTaGAGCAGGGCATCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGSFRAR*SRASLL
Trigger: CAGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAACT...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCCTCTTCCAGCATCTaGGCAACCTTTGCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: NTKQQKGRSECTSWETCTSSSSI*ATFACV
Trigger: CACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGGA...CGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTCCTCTTCCAGCATCTaGGCAACCTTTGCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: TKQQKGRSECTSWETCTFSSSSI*ATFACV
Trigger: CACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGGA...GAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAAGCCTGGGCTTTGTaGTTCCTCTCCAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTQAWAL*FLSRSW
Trigger: CCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTG...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCCAAGCCTGGGCTTTGTaGTTCCTCTCCAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSQAWAL*FLSRSW
Trigger: CCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTG...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGTTGGGCCAGAGGGGCTaGACTTCCGCATCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGLGQRG*TSASRK
Trigger: CTTTCTGGATGCGGAAGTCAAGCCCCTCTGGCCCAA...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTTCTTCTTGGCCAGGATaGAAGTCAGGTGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: HPGRPARSDSTQTQVASLSSWPG*KSGAHG
Trigger: GCCATGGGCACCTGACTTCAATCCTGGCCAAGAAGA...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAATGGAAGCCCTGGCCTTaGGCCGCTGTCTTCACTAAC +
Preference number: 5 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQWKPWP*AAVFTN
Trigger: GTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCCA...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGGAAGCCCTGGCCTTaGGCCGCTGTCTTCACTAAC +
Preference number: 5 (lower is better)
Translates to: QKNTKQQKGRSECTSWETWKPWP*AAVFTN
Trigger: GTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCCA...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCTGGAAGCCCTGGCCTTaGGCCGCTGTCTTCACTAAC +
Preference number: 5 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSWKPWP*AAVFTN
Trigger: GTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCCA...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACCACTGGAATCTCCGTTaGGACCGCCTGGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNHWNLR*DRLEGL
Trigger: TAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTG...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCGTGACGATGGCATCCTaGGAGACCCCTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: KNTKQQKGRSECTSWETCVTMAS*ETPALA
Trigger: TGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCAC...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp TCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCCCAAGTGGCAAGCCTaGCCTCTGAAGCGGTCACAA +
Preference number: 5 (lower is better)
Translates to: SSRRTPSSRKGAVSVHPGPKWQA*PLKRSQ
Trigger: TTGTGACCGCTTCAGAGGCAAGGCTTGCCACTTGGG...CCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp CTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACACCCAAGTGGCAAGCCTaGCCTCTGAAGCGGTCACAA +
Preference number: 5 (lower is better)
Translates to: LTLLQKNTKQQKGRSECTPKWQA*PLKRSQ
Trigger: TTGTGACCGCTTCAGAGGCAAGGCTTGCCACTTGGG...TGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp GTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAACCCAAGTGGCAAGCCTaGCCTCTGAAGCGGTCACAA +
Preference number: 5 (lower is better)
Translates to: VYILGDLHVLIPPRPKWQPKWQA*PLKRSQ
Trigger: TTGTGACCGCTTCAGAGGCAAGGCTTGCCACTTGGG...TTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS GCA 90 bp TTTGTGATCTGGTTCAAAGAGGGTGAGTGTAATCCGAACAGCTGCTaGAGCCGGCTCACAGTCCTGATGCTGTTCTCCTGCCCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FVIWFKEGECNPNSC*SRLTVLMLFSCPSL
Trigger: GAGGCTGGGGCAGGAGAACAGCATCAGGACTGTGAGCCGGCTGCAGCAGCTGTTCGGATTACACTCACCCTCTTTGAACCAGATCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS CCA 90 bp AGGCTGTATGCCAGGGACCAGGCTCCCAGAAACAGAACTCTGGACTaGTGTTCCTCCCGAGGAAGAGCTGCCAGAAGAAACCCCATGTTT +
Preference number: 5 (lower is better)
Translates to: RLYARDQAPRNRTLD*CSSRGRAARRNPMF
Trigger: AAACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTGTTTCTGGGAGCCTGGTCCCTGGCATACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CCCTCCATGGGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTGTGAAGCCGGCTTaGGAAAACTTGGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: PSMGGTSEVPRSAPLRTHAVKPA*ENLDFF
Trigger: GAAAAAGTCCAAGTTTTCCAAAGCCGGCTTCACAGC...GTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCCCATGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACTTGGGCCAGAGGGGCTaGACTTCCGCATCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNLGQRG*TSASRK
Trigger: CTTTCTGGATGCGGAAGTCAAGCCCCTCTGGCCCAA...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGTCTTCTTGGCCAGGATaGAAGTCAGGTGCCCATGGC +
Preference number: 5 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWSSWPG*KSGAHG
Trigger: GCCATGGGCACCTGACTTCAATCCTGGCCAAGAAGA...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCACCGAGGAGGCTGGATaGCGGATCAAGTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: TLLQKNTKQQKGRSECTSTEEAG*RIKSSS
Trigger: GGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGT...GGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAAATGCAGCCAATTCCTaGGACACGGCTTCCACCGAG +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEENAANS*DTASTE
Trigger: CTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCATT...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGAATGCAGCCAATTCCTaGGACACGGCTTCCACCGAG +
Preference number: 5 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWNAANS*DTASTE
Trigger: CTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCATT...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAAGAAGCCTTTGGGCCTaGGAGCTTATTGGCAAATGG +
Preference number: 5 (lower is better)
Translates to: PRSAPLRTHAPPEEHQAARSLWA*ELIGKW
Trigger: CCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCT...TGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGTGTGGGAGAAGCCTTaGGGCCTTGGAGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEVWEKP*GLGAYW
Trigger: CCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACAC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGTGTGGGAGAAGCCTTaGGGCCTTGGAGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWVWEKP*GLGAYW
Trigger: CCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACAC...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp TCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATGTGACGATGGCATCCTaGGAGACCCCTGCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SRSSRRTPSSRKGAVSVHVTMAS*ETPALA
Trigger: TGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCAC...ATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGGACCCCTGGTATCCTaGACCCTCAGAGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEGPLVS*TLREMK
Trigger: CTTCATCTCTCTGAGGGTCAAGGATACCAGGGGTCC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GTACCCTGGGAGTCAGGAGCCAAGAGCGGTCCGTTTTCCCACAGGTGTATGTGCGGCCTCTGCTTGGCTTaGAGCTCAGCAATACAAATC +
Preference number: 5 (lower is better)
Translates to: VPWESGAKSGPFSHRCMCGLCLA*SSAIQI
Trigger: GATTTGTATTGCTGAGCTCAAAGCCAAGCAGAGGCC...GCACATACACCTGTGGGAAAACGGACCGCTCTTGGCTCCTGACTCCCAGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAACTGCCGGCCTCTGCTaGGCTTTGAGCTCAGCAATA +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEETAGLC*ALSSAI
Trigger: TATTGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGT...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCGCCTGTAGGTCTGCCTaGCCATGGCTGTTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTACRSA*PWLFSH
Trigger: ATGACTGAACAGCCATGGCAAGGCAGACCTACAGGC...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS GCA 90 bp GCAGGAATGACGCAAGATAGGCATACACCCCAGAGCGGACCTGACTaGTCAGCTCCCGAGTCTGCGCCTCTATGTCTAATAGGATTCCAT +
Preference number: 5 (lower is better)
Translates to: AGMTQDRHTPQSGPD*SAPESAPLCLIGFH
Trigger: ATGGAATCCTATTAGACATAGAGGCGCAGACTCGGGAGCTGAGCAGTCAGGTCCGCTCTGGGGTGTATGCCTATCTTGCGTCATTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 90 bp TTGACTTCCGCATCCAGAAAGCCCTTCACACAGTCCTCCCAAGCCTaGGCTTTGTTGTTCCTCTCCAGGTCCTGGCTCTCCAGTTTGATC +
Preference number: 5 (lower is better)
Translates to: LTSASRKPFTQSSQA*ALLFLSRSWLSSLI
Trigger: GATCAAACTGGAGAGCCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTGGGAGGACTGTGTGAAGGGCTTTCTGGATGCGGAAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 90 bp GAGACCCCTGCTTTGGCAGAGGAGTCAGCGCTGAAGGAGAGCACATaGACAGGAATAGGGACAGGGGTTATAATTCCCAAGGAGTTCGAG +
Preference number: 5 (lower is better)
Translates to: ETPALAEESALKEST*TGIGTGVIIPKEFE
Trigger: CTCGAACTCCTTGGGAATTATAACCCCTGTCCCTATTCCTGTCCATGTGCTCTCCTTCAGCGCTGACTCCTCTGCCAAAGCAGGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586152.1
ENST00000590769.5
CDS-3UTR CAA 90 bp AGGGTATTCTGCTCCAGCTGCACGCGCAATGGTACGTGGGGAGGAGGGAGCACCCCGGCTTTGGAAAACTaGGACTTTTTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVFCSSCTRNGTWGGGSTPALEN*DFFDFF
Trigger: GAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCGG...GGTGCTCCCTCCTCCCCACGTACCATTGCGCGTGCAGCTGGAGCAGAATACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GTTCCCGCAGGCCCTGAGCTTCCGCTGATGGGACCGCAACAGGCTTATGCTCCTCCGGCTTTGGAAAACTaGGACTTTTTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: VPAGPELPLMGPQQAYAPPALEN*DFFDFF
Trigger: GAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCGG...AGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CAA 90 bp AGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCGCTGTGAAGCCGGCTTaGGAAAACTTGGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: SAEKRSAENSRSSRRTPSAVKPA*ENLDFF
Trigger: GAAAAAGTCCAAGTTTTCCAAAGCCGGCTTCACAGC...GCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAGCCTGGAGCAAGTCGTaGTCAGAAGTAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEEAWSKS*SEVEPK
Trigger: CTTTGGCTCTACTTCTGACAACGACTTGCTCCAGGC...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CTCCTCCAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGCCTGGAGCAAGTCGTaGTCAGAAGTAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: LLQKNTKQQKGRSECTSWAWSKS*SEVEPK
Trigger: CTTTGGCTCTACTTCTGACAACGACTTGCTCCAGGC...CCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAAAATGAGTCCTCCAGGTaGACAGGAGGAGGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: TSEVPRSAPLRTHAPPEENESSR*TGGGLA
Trigger: TGCTAACCCTCCTCCTGTCAACCTGGAGGACTCATT...TTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGACCGAGGAGGCTGGATaGCGGATCAAGTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLTEEAG*RIKSSS
Trigger: GGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGT...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTACCGAGGAGGCTGGATaGCGGATCAAGTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: RRTPSSRKGAVSVHPGRPTEEAG*RIKSSS
Trigger: GGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGT...AGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTAGAAGCCTTTGGGCCTaGGAGCTTATTGGCAAATGG +
Preference number: 5 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSRSLWA*ELIGKW
Trigger: CCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCT...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCACCCCATGTTTGGAGATaGAGCTGGCAAAGGGATTAT +
Preference number: 5 (lower is better)
Translates to: VPRSAPLRTHAPPEEHQAPHVWR*SWQRDY
Trigger: ATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGG...TGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGCCTCTCTGAATGGACATGTGTaGTCGAATTCTGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: GRPARSDSTQTQVASLASLNGHV*SNSAPP
Trigger: TGGTGGAGCAGAATTCGACAACACATGTCCATTCAG...AGAGGCAAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CCACTCTCCAAGCTCTTCTGCACATCACCCTTCAGTCGACACATAACCCCACTGACTGCCGGCCTCTGCTaGGCTTTGAGCTCAGCAATA +
Preference number: 5 (lower is better)
Translates to: PLSKLFCTSPFSRHITPLTAGLC*ALSSAI
Trigger: TATTGCTGAGCTCAAAGCCAAGCAGAGGCCGGCAGT...CAGTGGGGTTATGTGTCGACTGAAGGGTGATGTGCAGAAGAGCTTGGAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GGAGGCACATCAGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGTGTATCCTAGATCCTaGACCTTAAAGAACCCATGC +
Preference number: 5 (lower is better)
Translates to: GGTSEVPRSAPLRTHAPPVYPRS*TLKNPC
Trigger: GCATGGGTTCTTTAAGGTCAAGGATCTAGGATACAC...TGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCTGATGTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS GCA 90 bp GGAAACAAACTGTCAGCTCCAAGTTCTGCTTCTGCAGTCCGAAGGTaGAAAGTGGGTCTCGAGAGAGATGTGACTGTGCTCCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GNKLSAPSSASAVRR*KVGLERDVTVLLCH
Trigger: GTGGCAGAGGAGCACAGTCACATCTCTCTCGAGACCCACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGACAGTTTGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS CCA 90 bp TGTGGGAGAAGCCTTTGGGCCTTGGAGCTTATTGGCAAATGGAGATaGGGGCGTGAAGTTTTTCTGCTGCTGAGTGCCGGCATGAAAGAC +
Preference number: 5 (lower is better)
Translates to: CGRSLWALELIGKWR*GREVFLLLSAGMKD
Trigger: GTCTTTCATGCCGGCACTCAGCAGCAGAAAAACTTCACGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS-3UTR CAA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATCTCATCATTCCATaGGAACTTCTTCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSDLIIP*ELLPRS
Trigger: GGACCTCGGAAGAAGTTCCAATGGAATGATGAGATC...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CATCCTGGGAGACCTGCACGTTCTGATTCCACCCAGACCCAAGTGGCAAGCCTTGAAGAAACCCCATGTTaGGAGATTGAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HPGRPARSDSTQTQVASLEETPC*EIELAK
Trigger: CTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTC...AAGGCTTGCCACTTGGGTCTGGGTGGAATCAGAACGTGCAGGTCTCCCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGAAGAAACCCCATGTTaGGAGATTGAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PSSRKGAVSVHPGRPARSEETPC*EIELAK
Trigger: CTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTC...AGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 90 bp TCCCAGAAACAGAACTCTGGACTGGTGTTCCTCCCGAGGAAGAGCTaGCAGAAGAAACCCCATGTTTGGAGATTGAGCTGGCAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: SQKQNSGLVFLPRKS*QKKPHVWRLSWQRD
Trigger: ATCCCTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTGTTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATGATCTCATCATTCCATaGGAACTTCTTCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDDLIIP*ELLPRS
Trigger: GGACCTCGGAAGAAGTTCCAATGGAATGATGAGATC...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATGCCATAACTTTCTTCTaGGCCAGGATTGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSRKGAVSVHPGRPARSDAITFF*ARIEVR
Trigger: CCTGACTTCAATCCTGGCCAAGAAGAAAGTTATGGC...ATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp GAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAGACGATTCCTTCACCTaGATTTTAGAAGGGGCCATA +
Preference number: 5 (lower is better)
Translates to: EKRSAENSRSSRRTPSSRDDSFT*ILEGAI
Trigger: TATGGCCCCTTCTAAAATCAAGGTGAAGGAATCGTC...TCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAAGTGTGGGAGAAGCCTTaGGGCCTTGGAGCTTATTGG +
Preference number: 5 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKVWEKP*GLGAYW
Trigger: CCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACAC...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACCCCATGTTTGGAGATaGAGCTGGCAAAGGGATTAT +
Preference number: 5 (lower is better)
Translates to: RTPSSRKGAVSVHPGRPAPHVWR*SWQRDY
Trigger: ATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGG...TGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp CAGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCCTGAATGGACATGTGTaGTCGAATTCTGCTCCACCA +
Preference number: 5 (lower is better)
Translates to: QKNTKQQKGRSECTSWETLNGHV*SNSAPP
Trigger: TGGTGGAGCAGAATTCGACAACACATGTCCATTCAG...GGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACGGCCTCTGCTTGGCTTaGAGCTCAGCAATACAAATC +
Preference number: 5 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNGLCLA*SSAIQI
Trigger: GATTTGTATTGCTGAGCTCAAAGCCAAGCAGAGGCC...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS GCA 90 bp TGTGGGGCTCCGACATGGCTACCAACAAGTCTTAGCGGGTGTCACTaGATGGCTTCTGTTAACATTGAAAAGAAGGGCCAGGTCAAACGA +
Preference number: 5 (lower is better)
Translates to: CGAPTWLPTSLSGCH*MASVNIEKKGQVKR
Trigger: TCGTTTGACCTGGCCCTTCTTTTCAATGTTAACAGAAGCCATGCAGTGACACCCGCTAAGACTTGTTGGTAGCCATGTCGGAGCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS CCA 90 bp CCCCAATACTCAGGCCTCCTGTTTGGTGATCTGAGGGCAAAGCAATaGGGCCACCAATCTGTCCTGATGGGACAGAAACCTTTTTATCAG +
Preference number: 5 (lower is better)
Translates to: PQYSGLLFGDLRAKQ*GHQSVLMGQKPFYQ
Trigger: CTGATAAAAAGGTTTCTGTCCCATCAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCTGAGTATTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 90 bp TTGGGCCGACGCTGCGCTCAACTGCAGTTAACACTTCCCAGTTCATaGTTCAGTTTTAAAGTGTCCAAACTACGCCCGGCATCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LGRRCAQLQLTLPSS*FSFKVSKLRPASVF
Trigger: GAAGACAGATGCCGGGCGTAGTTTGGACACTTTAAAACTGAACCATGAACTGGGAAGTGTTAACTGCAGTTGAGCGCAGCGTCGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS-3UTR CAA 90 bp ACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTCCGGCTTTGGAAAACTaGGACTTTTTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: TPSSRKGAVSVHPGRPARPALEN*DFFDFF
Trigger: GAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCGG...ACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCAAGCAGCAGAAAGGCCGGCTTTGGAAAACTaGGACTTTTTCGATTTCTTC +
Preference number: 5 (lower is better)
Translates to: SAPLRTHAPPEEHQAAERPALEN*DFFDFF
Trigger: GAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCGG...CCTTTCTGCTGCTTGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGAAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGATCTCATCATTCCATaGGAACTTCTTCCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RRTPSSRKGAVSVHPGRPDLIIP*ELLPRS
Trigger: GGACCTCGGAAGAAGTTCCAATGGAATGATGAGATC...AGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACCCTAGGTGTTCTTAGTATTTCGCAGGGACAGTGCAGGTCTCCCAGCTGTGGCGACGATTCCTTCACCTaGATTTTAGAAGGGGCCATA +
Preference number: 5 (lower is better)
Translates to: TLGVLSISQGQCRSPSCGDDSFT*ILEGAI
Trigger: TATGGCCCCTTCTAAAATCAAGGTGAAGGAATCGTC...GCCACAGCTGGGAGACCTGCACTGTCCCTGCGAAATACTAAGAACACCTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AAGAACACCAAGCAGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCGACGATTCCTTCACCTaGATTTTAGAAGGGGCCATA +
Preference number: 5 (lower is better)
Translates to: KNTKQQKGRSECTSWETCDDSFT*ILEGAI
Trigger: TATGGCCCCTTCTAAAATCAAGGTGAAGGAATCGTC...GCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCTGCTTGGTGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAAAATGAGTCCTCCAGGTaGACAGGAGGAGGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKNESSR*TGGGLA
Trigger: TGCTAACCCTCCTCCTGTCAACCTGGAGGACTCATT...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp GAGCGGTCCGTTTTCCCACAGGTGTATGTGCTGAGGACACCGTATACTCTCAACGAAGAAACCCCATGTTaGGAGATTGAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: ERSVFPQVYVLRTPYTLNEETPC*EIELAK
Trigger: CTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTC...GTTGAGAGTATACGGTGTCCTCAGCACATACACCTGTGGGAAAACGGACCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS CCA 90 bp AGGCTGAAGGCCTTTTACCTTCCCTCGGATATTCTTCACCAGCTCTaGGTAGAAGAACTCTGGGCAGCGTTTGTGATCTGGTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: RLKAFYLPSDILHQL*VEELWAAFVIWFKE
Trigger: CTCTTTGAACCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCAGAGCTGGTGAAGAATATCCGAGGGAAGGTAAAAGGCCTTCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS CCA 90 bp CTGGTGTTCCTCCCGAGGAAGAGCTGCCAGAAGAAACCCCATGTTTaGAGATTGAGCTGGCAAAGGGATTATTCTTGTAAGATGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LVFLPRKSCQKKPHV*RLSWQRDYSCKMSL
Trigger: CAGGCTCATCTTACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAGGAACACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 90 bp GGGCTCCGACATGGCTACCAACAAGTCTTAGCGGGTGTCACTGCATaGCTTCTGTTAACATTGAAAAGAAGGGCCAGGTCAAACGAAGAT +
Preference number: 5 (lower is better)
Translates to: GLRHGYQQVLAGVTA*LLLTLKRRARSNED
Trigger: ATCTTCGTTTGACCTGGCCCTTCTTTTCAATGTTAACAGAAGCCATGCAGTGACACCCGCTAAGACTTGTTGGTAGCCATGTCGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR CAA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACGCCATAACTTTCTTCTaGGCCAGGATTGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LACRSALPWLFSHSLFHYAITFF*ARIEVR
Trigger: CCTGACTTCAATCCTGGCCAAGAAGAAAGTTATGGC...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp AGAAGTGCCGAGAAGCGCTCCGCTGAGAACTCACGCTCCTCCAGAAGAACACCATCTTCTTTGGCTCTTTaGCTACTACCTAAGACTACT +
Preference number: 5 (lower is better)
Translates to: RSAEKRSAENSRSSRRTPSSLAL*LLPKTT
Trigger: AGTAGTCTTAGGTAGTAGCAAAAGAGCCAAAGAAGA...TGGTGTTCTTCTGGAGGAGCGTGAGTTCTCAGCGGAGCGCTTCTCGGCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS TCA 90 bp ACCAGAGGAAACCCCAAGAGTAGAAGTGCGTGTCACCCTGAGTACTaGCAAAGCACAGCCTCAAAGGACAAACCAAAACAACAACAGCGT +
Preference number: 5 (lower is better)
Translates to: TRGNPKSRSACHPEY*QSTASKDKPKQQQR
Trigger: ACGCTGTTGTTGTTTTGGTTTGTCCTTTGAGGCTGTGCTTTGTCAGTACTCAGGGTGACACGCACTTCTACTCTTGGGGTTTCCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS GCA 90 bp CATACTGAAGATGGGAAACAAACTGTCAGCTCCAAGTTCTGCTTCTaGAGTCCGAAGGTGCAAAGTGGGTCTCGAGAGAGATGTGACTGT +
Preference number: 5 (lower is better)
Translates to: HTEDGKQTVSSKFCF*SPKVQSGSRERCDC
Trigger: ACAGTCACATCTCTCTCGAGACCCACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGACAGTTTGTTTCCCATCTTCAGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS GCA 90 bp GCTCATCATACTGAAGATGGGAAACAAACTGTCAGCTCCAAGTTCTaGTTCTGCAGTCCGAAGGTGCAAAGTGGGTCTCGAGAGAGATGT +
Preference number: 5 (lower is better)
Translates to: AHHTEDGKQTVSSKF*FCSPKVQSGSRERC
Trigger: ACATCTCTCTCGAGACCCACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGACAGTTTGTTTCCCATCTTCAGTATGATGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS-3UTR CAA 90 bp AGCAGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCTCCTTTTCTTCGTCATaGAAAGGATCTGACAGATCT +
Preference number: 5 (lower is better)
Translates to: SRKGAVSVHPGRPARSDSSFSSS*KGSDRS
Trigger: AGATCTGTCAGATCCTTTCAATGACGAAGAAAAGGA...GGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS-3UTR CAA 90 bp AGAAAGGGCGCAGTGAGTGTACATCCTGGGAGACCTGCACGTTCTGATTCCACCTCTTCTTTGGCTCTTTaGCTACTACCTAAGACTACT +
Preference number: 5 (lower is better)
Translates to: RKGAVSVHPGRPARSDSTSSLAL*LLPKTT
Trigger: AGTAGTCTTAGGTAGTAGCAAAAGAGCCAAAGAAGA...GGTGGAATCAGAACGTGCAGGTCTCCCAGGATGTACACTCACTGCGCCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp CTCGCCTGTAGGTCTGCCTTGCCATGGCTGTTCAGTCATTCGCTCTTTCATTACTGGCTTCTGTTAACATaGAAAAGAAGGGCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LACRSALPWLFSHSLFHYWLLLT*KRRARS
Trigger: TGACCTGGCCCTTCTTTTCAATGTTAACAGAAGCCA...GTAATGAAAGAGCGAATGACTGAACAGCCATGGCAAGGCAGACCTACAGGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS-3UTR CAA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCTTTTCCCTGCTGAACTaGGGACGGGTCGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IALYKINNLHTTPNTNIVFSLLN*GRVGWW
Trigger: CCACCAGCCGACCCGTCCCAAGTTCAGCAGGGAAAA...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp ATTGCTTTATACAAGATTAACAATCTCCACACCACCCCTAACACCAACATAGTCTTGGGCCAGAGGGGCTaGACTTCCGCATCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: IALYKINNLHTTPNTNIVLGQRG*TSASRK
Trigger: CTTTCTGGATGCGGAAGTCAAGCCCCTCTGGCCCAA...GACTATGTTGGTGTTAGGGGTGGTGTGGAGATTGTTAATCTTGTATAAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS TCA 90 bp TTCGGGCAAGGGCCTCTACTTTATGCCTTTCCTTTTCTTCGTCATTaGAAGGATCTGACAGATCTTTCTTCTTATCTCCAGGCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: FGQGPLLYAFPFLRH*KDLTDLSSYLQAEG
Trigger: GCCTTCAGCCTGGAGATAAGAAGAAAGATCTGTCAGATCCTTTCAATGACGAAGAAAAGGAAAGGCATAAAGTAGAGGCCCTTGCCCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS-3UTR CAA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGATGTCTATCTGTGACTaGGGACCCCTGGTATCCTTG +
Preference number: 5 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVMSICD*GPLVSL
Trigger: CAAGGATACCAGGGGTCCCAAGTCACAGATAGACAT...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp ATCTTTAAAAAGGTCTTCGTCTCAGATCCATTCAGAGGGCTGAATGGACATGTGGCCATAACTTTCTTCTaGGCCAGGATTGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: IFKKVFVSDPFRGLNGHVAITFF*ARIEVR
Trigger: CCTGACTTCAATCCTGGCCAAGAAGAAAGTTATGGC...CACATGTCCATTCAGCCCTCTGAATGGATCTGAGACGAAGACCTTTTTAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000396658.8
CDS-3UTR CAA 90 bp ACCTTGTGGCACAGACCTCACAAGACAGGCAAGTGCCCTCAAATCCTTGTGAAAGACCTTCAAAATCACTaGGGAATGGTCAAAATAGAT +
Preference number: 5 (lower is better)
Translates to: TLWHRPHKTGKCPQILVKDLQNH*GMVKID
Trigger: ATCTATTTTGACCATTCCCAAGTGATTTTGAAGGTC...TTTCACAAGGATTTGAGGGCACTTGCCTGTCTTGTGAGGTCTGTGCCACAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS CCA 72 bp CCGGGCCAACCGAGACGCGCCGGGGAGCTACCCGCCTaGGCGCGGGGTTCGCTGCCGGCCCTGGAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: PGQPRRAGELPA*ARGSLPALELP
Trigger: AGGCAGCTCCAGGGCCGGCAGCGAACCCCGCGCCCAGGCGGGTAGCTCCCCGGCGCGTCTCGGTTGGCCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp CCATGGCCGGGTCCCCGAGCCCAGGGGAGCCTGGTGTaGCGCGCCGCGCGCCGGCCCAGGAGGAAGCGAAGA +
Preference number: 6 (lower is better)
Translates to: PWPGPRAQGSLV*RAARRPRRKRR
Trigger: TCTTCGCTTCCTCCTGGGCCGGCGCGCGGCGCGGCACACCAGGCTCCCCTGGGCTCGGGGACCCGGCCATGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS CCA 72 bp CAGCCGGCCCCCGTCACGTGGTCGGGCCCACTCCAATaGGCGGCGCCGGGGCGACTTGCTGTTCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: QPAPVTWSGPLQ*AAPGRLAVPGG
Trigger: GCCGCCGGGAACAGCAAGTCGCCCCGGCGCCGCCCATTGGAGTGGGCCCGACCACGTGACGGGGGCCGGCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp GTCGGGCCCACTCCAATGGGCGGCGCCGGGGCGACTTaGTGTTCCCGGCGGCCCGTGCGTCGGCGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: VGPTPMGGAGAT*CSRRPVRRRWL
Trigger: CAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGCCCCGGCGCCGCCCATTGGAGTGGGCCCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 72 bp GGTCGGGCCCACTCCAATGGGCGGCGCCGGGGCGACTaGCTGTTCCCGGCGGCCCGTGCGTCGGCGGTGGTT +
Preference number: 6 (lower is better)
Translates to: GRAHSNGRRRGD*LFPAARASAVV
Trigger: AACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGCCCCGGCGCCGCCCATTGGAGTGGGCCCGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS TCA 72 bp AGTTGCCGGGCGCGGGAGCCCAGACCCGGCGGAGGCTaGGTTCCAGGCCGCGCCGAGCTCCGTCAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: SCRAREPRPGGG*VPGRAELRQGS
Trigger: GCTACCCTGACGGAGCTCGGCGCGGCCTGGAACTCAGCCTCCGCCGGGTCTGGGCTCCCGCGCCCGGCAACT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS TCA 72 bp ACCGAGGCCGAGGGTGGCCACGTCGGGCACCGGCTTTaGTCCCCGAGGCCGGCCGGGTGGGGTCTGCACTCG +
Preference number: 6 (lower is better)
Translates to: TEAEGGHVGHRL*SPRPAGWGLHS
Trigger: CGAGTGCAGACCCCACCCGGCCGGCCTCGGGGATCAAAGCCGGTGCCCGACGTGGCCACCCTCGGCCTCGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp GCCGCGCCGAGCTCCGTCAGGGTAGCTCACTGGCGCTaGGACGGGGCCGACCAGCGCCTCGGGCTCGGGAAT +
Preference number: 6 (lower is better)
Translates to: AAPSSVRVAHWR*DGADQRLGLGN
Trigger: ATTCCCGAGCCCGAGGCGCTGGTCGGCCCCGTCGCAGCGCCAGTGAGCTACCCTGACGGAGCTCGGCGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS GCA 72 bp GCGGCGCCGGGGCGACTTGCTGTTCCCGGCGGCCCGTaGGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: AAPGRLAVPGGP*VGGGWVVRWRL
Trigger: CAGCCGCCATCTTACCACCCAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGCCCCGGCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 72 bp TTCCAGGCCGCGCCGAGCTCCGTCAGGGTAGCTCACTaGCGCTGCGACGGGGCCGACCAGCGCCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: FQAAPSSVRVAH*RCDGADQRLGL
Trigger: GAGCCCGAGGCGCTGGTCGGCCCCGTCGCAGCGCCAGTGAGCTACCCTGACGGAGCTCGGCGCGGCCTGGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS CCA 72 bp ATCCCCGGCGGGCGCGGTGACGTCAGAGTAGCGGCGTaGCCAGTGACAGCCGGCCCCCGTCACGTGGTCGGG +
Preference number: 6 (lower is better)
Translates to: IPGGRGDVRVAA*PVTAGPRHVVG
Trigger: CCCGACCACGTGACGGGGGCCGGCTGTCACTGGCCACGCCGCTACTCTGACGTCACCGCGCCCGCCGGGGAT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 72 bp GACCGAGGCCGAGGGTGGCCACGTCGGGCACCGGCTTaGATCCCCGAGGCCGGCCGGGTGGGGTCTGCACTC +
Preference number: 6 (lower is better)
Translates to: DRGRGWPRRAPA*IPEAGRVGSAL
Trigger: GAGTGCAGACCCCACCCGGCCGGCCTCGGGGATCAAAGCCGGTGCCCGACGTGGCCACCCTCGGCCTCGGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS TCA 72 bp GCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGTaGGTCCGAGCGGCCGGGCCAACCGAGACGCGCCGG +
Preference number: 6 (lower is better)
Translates to: AAVSLRLGDLVW*VRAAGPTETRR
Trigger: CCGGCGCGTCTCGGTTGGCCCGGCCGCTCGGACTCACCACACCAAGTCGCCGAGCCGCAGACTCACAGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS TCA 72 bp GCCCCTCGGTCGACCAATGATCCCCGGCGGGCGCGGTaGCGTCAGAGTAGCGGCGTGGCCAGTGACAGCCGG +
Preference number: 6 (lower is better)
Translates to: APRSTNDPRRAR*RQSSGVASDSR
Trigger: CCGGCTGTCACTGGCCACGCCGCTACTCTGACGTCACCGCGCCCGCCGGGGATCATTGGTCGACCGAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp CCGCGCCGCGCGCCGGCCCAGGAGGAAGCGAAGAAATaGCAACTCGACGTCCGCGCAGCCACTCCGGGGACA +
Preference number: 6 (lower is better)
Translates to: PRRAPAQEEAKK*QLDVRAATPGT
Trigger: TGTCCCCGGAGTGGCTGCGCGGACGTCGAGTTGGCATTTCTTCGCTTCCTCCTGGGCCGGCGCGCGGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262376.11
ENST00000592120.5
CDS GCA 72 bp CCGCCTGGGCGCGGGGTTCGCTGCCGGCCCTGGAGCTaGCTTTTTATGCGCTCCAGGTCGCGGAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PPGRGVRCRPWS*LFMRSRSRREG
Trigger: CCCCTCTCTCCGCGACCTGGAGCGCATAAAAAGGCAGCTCCAGGGCCGGCAGCGAACCCCGCGCCCAGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 90 bp GCCGGGGCGACTTGCTGTTCCCGGCGGCCCGTGCGTCGGCGGTGGTaGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTG +
Preference number: 6 (lower is better)
Translates to: AGATCCSRRPVRRRW*GGKMAAVSLRLGDL
Trigger: CAAGTCGCCGAGCCGCAGACTCACAGCCGCCATCTTACCACCCAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGCCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 72 bp AACGAGAGAGCCCGGACCCGACAACGACACGCACCTTaGTCCCCAGCGCCGACGCGGGCCGCAGACGTCCCC +
Preference number: 6 (lower is better)
Translates to: NERARTRQRHAP*SPAPTRAADVP
Trigger: GGGGACGTCTGCGGCCCGCGTCGGCGCTGGGGACAAAGGTGCGTGTCGTTGTCGGGTCCGGGCTCTCTCGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 90 bp CCCAGGTTGCGATGCAGCCGACCTGTGCGGCCGGCTCAGCCGGGGTaGTCTAAACCGGACTGCTGGCGTTGCCCCGCGAAGAAACGGCGG +
Preference number: 6 (lower is better)
Translates to: PRLRCSRPVRPAQPG*SKPDCWRCPAKKRR
Trigger: CCGCCGTTTCTTCGCGGGGCAACGCCAGCAGTCCGGTTTAGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp CTGGCCGGTGCCATTCGGTCAAAGCCCAGGTTGCGATaGAGCCGACCTGTGCGGCCGGCTCAGCCGGGGTTG +
Preference number: 6 (lower is better)
Translates to: LAGAIRSKPRLR*SRPVRPAQPGL
Trigger: CAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 72 bp GCGACTTGCTGTTCCCGGCGGCCCGTGCGTCGGCGGTaGTTGGGTGGTAAGATGGCGGCTGTGAGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: ATCCSRRPVRRR*LGGKMAAVSLR
Trigger: CCGCAGACTCACAGCCGCCATCTTACCACCCAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 72 bp CGATGCAGCCGACCTGTGCGGCCGGCTCAGCCGGGGTaGTCTAAACCGGACTGCTGGCGTTGCCCCGCGAAG +
Preference number: 6 (lower is better)
Translates to: RCSRPVRPAQPG*SKPDCWRCPAK
Trigger: CTTCGCGGGGCAACGCCAGCAGTCCGGTTTAGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 90 bp CCGGACCTGCGAGATCTGGCCGGTGCCATTCGGTCAAAGCCCAGGTaGCGATGCAGCCGACCTGTGCGGCCGGCTCAGCCGGGGTTGTCT +
Preference number: 6 (lower is better)
Translates to: PDLRDLAGAIRSKPR*RCSRPVRPAQPGLS
Trigger: AGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp GAAGCGCCGGGGACCGGACCTGCGAGATCTGGCCGGTaGCATTCGGTCAAAGCCCAGGTTGCGATGCAGCCG +
Preference number: 6 (lower is better)
Translates to: EAPGTGPARSGR*HSVKAQVAMQP
Trigger: CGGCTGCATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCGGTCCCCGGCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CAA 72 bp ACTTGCTGTTCCCGGCGGCCCGTGCGTCGGCGGTGGTaGGGTGGTAAGATGGCGGCTGTGAGTCTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: TCCSRRPVRRRW*GGKMAAVSLRL
Trigger: GAGCCGCAGACTCACAGCCGCCATCTTACCACCCAACCACCGCCGACGCACGGGCCGCCGGGAACAGCAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 72 bp AGGAGGAGGGTTAGCAAGGCCGCCCGATGCCTGGGATaGGAGCTCCCTGCTCGAGGCCCCAATACTCAGGCC +
Preference number: 6 (lower is better)
Translates to: RRRVSKAARCLG*ELPARGPNTQA
Trigger: GGCCTGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp CGGTGCGCGTGGCACACTGACCGTCGGGTGATTACCTaGCAGACTCTGCGGGATATGGGTGGGCACCGCAGC +
Preference number: 6 (lower is better)
Translates to: RCAWHTDRRVIT*QTLRDMGGHRS
Trigger: GCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS TCA 72 bp TGCGTCGGCGGTGGTTGGGTGGTAAGATGGCGGCTGTaGGTCTGCGGCTCGGCGACTTGGTGTGGTGAGTCC +
Preference number: 6 (lower is better)
Translates to: CVGGGWVVRWRL*VCGSATWCGES
Trigger: GGACTCACCACACCAAGTCGCCGAGCCGCAGACTCACAGCCGCCATCTTACCACCCAACCACCGCCGACGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp AGCCTGAGCCAGCTCCTTAACGCGCTTCTCCAGGGGTaGTGGCAGGCCTTCGGGGAGAGAAGAGGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: SLSQLLNALLQG*WQAFGERRGLP
Trigger: AGGCAGCCCTCTTCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGCGTTAAGGAGCTGGCTCAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 72 bp CAGGTTGACAGGAGGAGGGTTAGCAAGGCCGCCCGATaGCTGGGATGGGAGCTCCCTGCTCGAGGCCCCAAT +
Preference number: 6 (lower is better)
Translates to: QVDRRRVSKAAR*LGWELPARGPN
Trigger: ATTGGGGCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTCCTGTCAACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS GCA 72 bp GGGCAGAAGAGGACGAGGCTGGGGTCTTGTGAGAGCTaGTGCTGGAGGCTGACAGGCCTCCTGAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GQKRTRLGSCES*CWRLTGLLRWL
Trigger: CAGCCACCTCAGGAGGCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGACCCCAGCCTCGTCCTCTTCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 72 bp TCGGGTGATTACCTGGCAGACTCTGCGGGATATGGGTaGGCACCGCAGCGTGTGGGAGAGGCGCTGCATGGG +
Preference number: 6 (lower is better)
Translates to: SGDYLADSAGYG*APQRVGEALHG
Trigger: CCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTAATCACCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS CAA 72 bp AAGGACCCGGGGGCAGGGCCTGTGACGATGGCATCCTaGGAGACCCCTGCTTTGGCAGAGGAGTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: KDPGAGPVTMAS*ETPALAEESAL
Trigger: CAGCGCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCACAGGCCCTGCCCCCGGGTCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586152.1
ENST00000590769.5
CDS TCA 72 bp TGGGGGCCAGGCACAGGAACTGCCACTTGGGGCCCGTaGGACGTCCGTGGCAAGCTGTGGTGCTTAGCTTTG +
Preference number: 6 (lower is better)
Translates to: WGPGTGTATWGP*DVRGKLWCLAL
Trigger: CAAAGCTAAGCACCACAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTGCCTGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS TCA 72 bp AAGGCACACGGTGCGCGTGGCACACTGACCGTCGGGTaGTTACCTGGCAGACTCTGCGGGATATGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: KAHGARGTLTVG*LPGRLCGIWVG
Trigger: GCCCACCCATATCCCGCAGAGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCGTGTGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS TCA 72 bp TGGAGAGGGCAAAGGCACACGGTGCGCGTGGCACACTaGCCGTCGGGTGATTACCTGGCAGACTCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: WRGQRHTVRVAH*PSGDYLADSAG
Trigger: TCCCGCAGAGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCGTGTGCCTTTGCCCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS GCA 72 bp GTCGGCTGGTGGCCTGTCCCACGGAGGGAGGCTGTATaGCAGGGACCAGGCTCCCAGAAACAGAACTCTGGA +
Preference number: 6 (lower is better)
Translates to: VGWWPVPRREAV*QGPGSQKQNSG
Trigger: TCCAGAGTTCTGTTTCTGGGAGCCTGGTCCCTGGCATACAGCCTCCCTCCGTGGGACAGGCCACCAGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 72 bp TTCGGTCAAAGCCCAGGTTGCGATGCAGCCGACCTGTaGGGCCGGCTCAGCCGGGGTTGTCTAAACCGGACT +
Preference number: 6 (lower is better)
Translates to: FGQSPGCDAADL*GRLSRGCLNRT
Trigger: AGTCCGGTTTAGACAACCCCGGCTGAGCCGGCCGCACAGGTCGGCTGCATCGCAACCTGGGCTTTGACCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS GCA 72 bp ATGCTGAGCCAGCTCCTTAACGCGCTTCTCCAGGGGTaGTGGCAGGCCTTCGGGGAGAGAAGAGGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: MLSQLLNALLQG*WQAFGERRGLP
Trigger: AGGCAGCCCTCTTCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGCGTTAAGGAGCTGGCTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585857.1
CDS CCA 72 bp TTGACAGGAGGAGGGTTAGCAAGGCCGCCCGATGCCTaGGATGGGAGCTCCCTGCTCGAGGCCCCAATACTC +
Preference number: 6 (lower is better)
Translates to: LTGGGLARPPDA*DGSSLLEAPIL
Trigger: GAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTCCTGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp GAAAGCAGAAGCGCCGGGGACCGGACCTGCGAGATCTaGCCGGTGCCATTCGGTCAAAGCCCAGGTTGCGAT +
Preference number: 6 (lower is better)
Translates to: ESRSAGDRTCEI*PVPFGQSPGCD
Trigger: ATCGCAACCTGGGCTTTGACCGAATGGCACCGGCCAGATCTCGCAGGTCCGGTCCCCGGCGCTTCTGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS CCA 72 bp CCTAGGGGTGGAGAGGGCAAAGGCACACGGTGCGCGTaGCACACTGACCGTCGGGTGATTACCTGGCAGACT +
Preference number: 6 (lower is better)
Translates to: PRGGEGKGTRCA*HTDRRVITWQT
Trigger: AGTCTGCCAGGTAATCACCCGACGGTCAGTGTGCCACGCGCACCGTGTGCCTTTGCCCTCTCCACCCCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS GCA 72 bp GGCAGGGCCTGTGACGATGGCATCCTTGGAGACCCCTaGTTTGGCAGAGGAGTCAGCGCTGAAGGAGAGCAC +
Preference number: 6 (lower is better)
Translates to: GRACDDGILGDP*FGRGVSAEGEH
Trigger: GTGCTCTCCTTCAGCGCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGATGCCATCGTCACAGGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586152.1
ENST00000590769.5
CDS CCA 72 bp TGCCACTCCCTGGGTCCCACCACTGGAATCTCCGTTTaGACCGCCTGGAGGGGCTACCAGAGTCAACTTCTG +
Preference number: 6 (lower is better)
Translates to: CHSLGPTTGISV*TAWRGYQSQLL
Trigger: CAGAAGTTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGGGAGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS CAA 72 bp CTGCAGAGGGCTTTAGGGACGGCGAGGTCAGCAACTTaGCCACTCCCTGGGTCCCACCACTGGAATCTCCGT +
Preference number: 6 (lower is better)
Translates to: LQRALGTARSAT*PLPGSHHWNLR
Trigger: ACGGAGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGCCGTCCCTAAAGCCCTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS CAA 90 bp GGCATGAAAGACTTTGACCTGGGGGCCAGGCACAGGAACTGCCACTaGGGGCCCGTGAGACGTCCGTGGCAAGCTGTGGTGCTTAGCTTT +
Preference number: 6 (lower is better)
Translates to: GMKDFDLGARHRNCH*GPVRRPWQAVVLSF
Trigger: AAAGCTAAGCACCACAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTGCCTGGCCCCCAGGTCAAAGTCTTTCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS TCA 72 bp GGCCCCAGACAGCTTTGGGCTGCTGGATTTGTAGGGTaGAGCCATCAAAGAGGAGCCGGCCAGCAGCACAGT +
Preference number: 6 (lower is better)
Translates to: GPRQLWAAGFVG*SHQRGAGQQHS
Trigger: ACTGTGCTGCTGGCCGGCTCCTCTTTGATGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 72 bp CTGGGTCCCACCACTGGAATCTCCGTTTGGACCGCCTaGAGGGGCTACCAGAGTCAACTTCTGGGAAACAGG +
Preference number: 6 (lower is better)
Translates to: LGPTTGISVWTA*RGYQSQLLGNR
Trigger: CCTGTTTCCCAGAAGTTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS CCA 72 bp TTTAGGGACGGCGAGGTCAGCAACTTTGCCACTCCCTaGGTCCCACCACTGGAATCTCCGTTTGGACCGCCT +
Preference number: 6 (lower is better)
Translates to: FRDGEVSNFATP*VPPLESPFGPP
Trigger: AGGCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGGGAGTGGCAAAGTTGCTGACCTCGCCGTCCCTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS CAA 72 bp TTGCCACTCCCTGGGTCCCACCACTGGAATCTCCGTTaGGACCGCCTGGAGGGGCTACCAGAGTCAACTTCT +
Preference number: 6 (lower is better)
Translates to: LPLPGSHHWNLR*DRLEGLPESTS
Trigger: AGAAGTTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTGGTGGGACCCAGGGAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000589191.1
ENST00000590769.5
CDS CAA 90 bp GAGGCTGGATTGCGGATCAAGTCTTCATCCAATGAGTCCTCCAGGTaGACAGGAGGAGGGTTAGCAAGGCCGCCCGATGCCTGGGATGGG +
Preference number: 6 (lower is better)
Translates to: EAGLRIKSSSNESSR*TGGGLARPPDAWDG
Trigger: CCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTCCTGTCAACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp CACAGGAACTGCCACTTGGGGCCCGTGAGACGTCCGTaGCAAGCTGTGGTGCTTAGCTTTGGACTGATGTAC +
Preference number: 6 (lower is better)
Translates to: HRNCHLGPVRRP*QAVVLSFGLMY
Trigger: GTACATCAGTCCAAAGCTAAGCACCACAGCTTGCCACGGACGTCTCACGGGCCCCAAGTGGCAGTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS TCA 72 bp CTGCTCGAGGCCCCAATACTCAGGCCTCCTGTTTGGTaGTCTGAGGGCAAAGCAATGGGGCCACCAATCTGT +
Preference number: 6 (lower is better)
Translates to: LLEAPILRPPVW*SEGKAMGPPIC
Trigger: ACAGATTGGTGGCCCCATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCTGAGTATTGGGGCCTCGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS TCA 72 bp CAGTGCCAGAGCCTGTTCTGCCAGAAAATTGAGGGGTaGCTGCAGAGAGCTAGCTGGTGGTGGAGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: QCQSLFCQKIEG*LQRASWWWSRR
Trigger: CCTTCTGCTCCACCACCAGCTAGCTCTCTGCAGTCACCCCTCAATTTTCTGGCAGAACAGGCTCTGGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS TCA 72 bp TTGGCCGCTGTCTTCACTAACTGCAGGAGGGAACGATaGCACTGTGTGGGAGAAGCCTTTGGGCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: LAAVFTNCRRER*HCVGEAFGPWS
Trigger: GCTCCAAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTTCCCTCCTGCAGTTAGTGAAGACAGCGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp AGTTCGAGCTCATGGCCCCAGACAGCTTTGGGCTGCTaGATTTGTAGGGTGAAGCCATCAAAGAGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SSSSWPQTALGC*ICRVKPSKRSR
Trigger: CCGGCTCCTCTTTGATGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTGGGGCCATGAGCTCGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CAA 72 bp TTGCGGATCAAGTCTTCATCCAATGAGTCCTCCAGGTaGACAGGAGGAGGGTTAGCAAGGCCGCCCGATGCC +
Preference number: 6 (lower is better)
Translates to: LRIKSSSNESSR*TGGGLARPPDA
Trigger: GGCATCGGGCGGCCTTGCTAACCCTCCTCCTGTCAACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CAA 72 bp AACAACAACAGCGTCAAGGCAAAGACACCAAGACCCTaGGCAGCGGCAAAGCACCTAGGGGTGGAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: NNNSVKAKTPRP*AAAKHLGVERA
Trigger: TGCCCTCTCCACCCCTAGGTGCTTTGCCGCTGCCAAGGGTCTTGGTGTCTTTGCCTTGACGCTGTTGTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS CAA 90 bp GCATCCAGAAAGCCCTTCACACAGTCCTCCCAAGCCTGGGCTTTGTaGTTCCTCTCCAGGTCCTGGCTCTCCAGTTTGATCTTCACCACC +
Preference number: 6 (lower is better)
Translates to: ASRKPFTQSSQAWAL*FLSRSWLSSLIFTT
Trigger: GGTGGTGAAGATCAAACTGGAGAGCCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTGGGAGGACTGTGTGAAGGGCTTTCTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CAA 90 bp TCCGCATCCAGAAAGCCCTTCACACAGTCCTCCCAAGCCTGGGCTTaGTTGTTCCTCTCCAGGTCCTGGCTCTCCAGTTTGATCTTCACC +
Preference number: 6 (lower is better)
Translates to: SASRKPFTQSSQAWA*LFLSRSWLSSLIFT
Trigger: GGTGAAGATCAAACTGGAGAGCCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTGGGAGGACTGTGTGAAGGGCTTTCTGGATGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 72 bp ACGCAAGATAGGCATACACCCCAGAGCGGACCTGACTaGTCAGCTCCCGAGTCTGCGCCTCTATGTCTAATA +
Preference number: 6 (lower is better)
Translates to: TQDRHTPQSGPD*SAPESAPLCLI
Trigger: TATTAGACATAGAGGCGCAGACTCGGGAGCTGAGCAGTCAGGTCCGCTCTGGGGTGTATGCCTATCTTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 72 bp GCCAGAGCCTGTTCTGCCAGAAAATTGAGGGGTGACTaGAGAGAGCTAGCTGGTGGTGGAGCAGAAGGACTA +
Preference number: 6 (lower is better)
Translates to: ARACSARKLRGD*RELAGGGAEGL
Trigger: TAGTCCTTCTGCTCCACCACCAGCTAGCTCTCTGCAGTCACCCCTCAATTTTCTGGCAGAACAGGCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS GCA 72 bp AGGAGTTCGAGCTCATGGCCCCAGACAGCTTTGGGCTaGTGGATTTGTAGGGTGAAGCCATCAAAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: RSSSSWPQTALG*WICRVKPSKRS
Trigger: GCTCCTCTTTGATGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTGGGGCCATGAGCTCGAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 72 bp CAAGCTGTGGTGCTTAGCTTTGGACTGATGTACTTCTaGCAGGCCCTTATTGAGGGGAGCCTGGCAGGACAG +
Preference number: 6 (lower is better)
Translates to: QAVVLSFGLMYF*QALIEGSLAGQ
Trigger: CTGTCCTGCCAGGCTCCCCTCAATAAGGGCCTGCCAGAAGTACATCAGTCCAAAGCTAAGCACCACAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp AGCCTTTGGGCCTTGGAGCTTATTGGCAAATGGAGATaGGGGCGTGAAGTTTTTCTGCTGCTGAGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: SLWALELIGKWR*GREVFLLLSAG
Trigger: GCCGGCACTCAGCAGCAGAAAAACTTCACGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp CAGGAGGGAACGATGACACTGTGTGGGAGAAGCCTTTaGGCCTTGGAGCTTATTGGCAAATGGAGATGGGGG +
Preference number: 6 (lower is better)
Translates to: QEGTMTLCGRSL*ALELIGKWRWG
Trigger: CCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTTCCCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CAA 72 bp AAGCCCTTCACACAGTCCTCCCAAGCCTGGGCTTTGTaGTTCCTCTCCAGGTCCTGGCTCTCCAGTTTGATC +
Preference number: 6 (lower is better)
Translates to: KPFTQSSQAWAL*FLSRSWLSSLI
Trigger: GATCAAACTGGAGAGCCAGGACCTGGAGAGGAACAACAAAGCCCAGGCTTGGGAGGACTGTGTGAAGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CAA 72 bp GCAGGAGGGAACGATGACACTGTGTGGGAGAAGCCTTaGGGCCTTGGAGCTTATTGGCAAATGGAGATGGGG +
Preference number: 6 (lower is better)
Translates to: AGGNDDTVWEKP*GLGAYWQMEMG
Trigger: CCCCATCTCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTTCCCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CAA 90 bp ACAAACCAAAACAACAACAGCGTCAAGGCAAAGACACCAAGACCCTaGGCAGCGGCAAAGCACCTAGGGGTGGAGAGGGCAAAGGCACAC +
Preference number: 6 (lower is better)
Translates to: TNQNNNSVKAKTPRP*AAAKHLGVERAKAH
Trigger: GTGTGCCTTTGCCCTCTCCACCCCTAGGTGCTTTGCCGCTGCCAAGGGTCTTGGTGTCTTTGCCTTGACGCTGTTGTTGTTTTGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS TCA 72 bp CGAGGAGGCTGGATTGCGGATCAAGTCTTCATCCAATaGGTCCTCCAGGTTGACAGGAGGAGGGTTAGCAAG +
Preference number: 6 (lower is better)
Translates to: RGGWIADQVFIQ*VLQVDRRRVSK
Trigger: CTTGCTAACCCTCCTCCTGTCAACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS GCA 72 bp ATCTGGTTCAAAGAGGGTGAGTGTAATCCGAACAGCTaGTGCAGCCGGCTCACAGTCCTGATGCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: IWFKEGECNPNS*CSRLTVLMLFS
Trigger: GGAGAACAGCATCAGGACTGTGAGCCGGCTGCAGCAGCTGTTCGGATTACACTCACCCTCTTTGAACCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS GCA 72 bp ATTCCTTGGACACGGCTTCCACCGAGGAGGCTGGATTaGGGATCAAGTCTTCATCCAATGAGTCCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: IPWTRLPPRRLD*GSSLHPMSPPG
Trigger: ACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAAGCCGTGTCCAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS GCA 72 bp CAGAACTCTGGACTGGTGTTCCTCCCGAGGAAGAGCTaGCAGAAGAAACCCCATGTTTGGAGATTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: QNSGLVFLPRKS*QKKPHVWRLSW
Trigger: CCAGCTCAATCTCCAAACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 72 bp CTGTCAGCTCCAAGTTCTGCTTCTGCAGTCCGAAGGTaGAAAGTGGGTCTCGAGAGAGATGTGACTGTGCTC +
Preference number: 6 (lower is better)
Translates to: LSAPSSASAVRR*KVGLERDVTVL
Trigger: GAGCACAGTCACATCTCTCTCGAGACCCACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS CCA 72 bp TCAGGCCTCCTGTTTGGTGATCTGAGGGCAAAGCAATaGGGCCACCAATCTGTCCTGATGGGACAGAAACCT +
Preference number: 6 (lower is better)
Translates to: SGLLFGDLRAKQ*GHQSVLMGQKP
Trigger: AGGTTTCTGTCCCATCAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAGATCACCAAACAGGAGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CAA 72 bp AATTCCTTGGACACGGCTTCCACCGAGGAGGCTGGATaGCGGATCAAGTCTTCATCCAATGAGTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: NSLDTASTEEAG*RIKSSSNESSR
Trigger: CCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAAGCCGTGTCCAAGGAATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CAA 72 bp TTCCCAAGGAGTTCGAGCTCATGGCCCCAGACAGCTTaGGGCTGCTGGATTTGTAGGGTGAAGCCATCAAAG +
Preference number: 6 (lower is better)
Translates to: FPRSSSSWPQTA*GCWICRVKPSK
Trigger: CTTTGATGGCTTCACCCTACAAATCCAGCAGCCCAAAGCTGTCTGGGGCCATGAGCTCGAACTCCTTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CAA 90 bp AATGCAGCCAATTCCTTGGACACGGCTTCCACCGAGGAGGCTGGATaGCGGATCAAGTCTTCATCCAATGAGTCCTCCAGGTTGACAGGA +
Preference number: 6 (lower is better)
Translates to: NAANSLDTASTEEAG*RIKSSSNESSRLTG
Trigger: TCCTGTCAACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAAGCCGTGTCCAAGGAATTGGCTGCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS CCA 72 bp ACCTGGCACAGTAGCTCCCTGATCTCATCATTCCATTaGAACTTCTTCCGAGGTCCCATTATCCTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: TWHSSSLISSFH*NFFRGPIILLP
Trigger: GGGCAGGAGGATAATGGGACCTCGGAAGAAGTTCCAATGGAATGATGAGATCAGGGAGCTACTGTGCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 72 bp TCCAGGTCCTGGCTCTCCAGTTTGATCTTCACCACCTaGCACAGTAGCTCCCTGATCTCATCATTCCATTGG +
Preference number: 6 (lower is better)
Translates to: SRSWLSSLIFTT*HSSSLISSFHW
Trigger: CCAATGGAATGATGAGATCAGGGAGCTACTGTGCCAGGTGGTGAAGATCAAACTGGAGAGCCAGGACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CAA 72 bp CACTGTGTGGGAGAAGCCTTTGGGCCTTGGAGCTTATaGGCAAATGGAGATGGGGGCGTGAAGTTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: HCVGEAFGPWSL*ANGDGGVKFFC
Trigger: GCAGAAAAACTTCACGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000586716.1
ENST00000590769.5
CDS GCA 72 bp GATGGGAAACAAACTGTCAGCTCCAAGTTCTGCTTCTaGAGTCCGAAGGTGCAAAGTGGGTCTCGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: DGKQTVSSKFCF*SPKVQSGSRER
Trigger: TCTCTCTCGAGACCCACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGACAGTTTGTTTCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS CCA 72 bp CTCTGGGTAGAAGAACTCTGGGCAGCGTTTGTGATCTaGTTCAAAGAGGGTGAGTGTAATCCGAACAGCTGC +
Preference number: 6 (lower is better)
Translates to: LWVEELWAAFVI*FKEGECNPNSC
Trigger: GCAGCTGTTCGGATTACACTCACCCTCTTTGAACCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS CCA 72 bp GCCTTTTACCTTCCCTCGGATATTCTTCACCAGCTCTaGGTAGAAGAACTCTGGGCAGCGTTTGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: AFYLPSDILHQL*VEELWAAFVIW
Trigger: CCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCAGAGCTGGTGAAGAATATCCGAGGGAAGGTAAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS CAA 90 bp TTCCTCCCGAGGAAGAGCTGCCAGAAGAAACCCCATGTTTGGAGATaGAGCTGGCAAAGGGATTATTCTTGTAAGATGAGCCTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: FLPRKSCQKKPHVWR*SWQRDYSCKMSLQS
Trigger: GCTCTGCAGGCTCATCTTACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS GCA 72 bp CCGACATGGCTACCAACAAGTCTTAGCGGGTGTCACTaGATGGCTTCTGTTAACATTGAAAAGAAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PTWLPTSLSGCH*MASVNIEKKGQ
Trigger: CTGGCCCTTCTTTTCAATGTTAACAGAAGCCATGCAGTGACACCCGCTAAGACTTGTTGGTAGCCATGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS GCA 72 bp AAAGTGGGTCTCGAGAGAGATGTGACTGTGCTCCTCTaGCACTTCCAAGAGCATGCTAAAACATCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: KVGLERDVTVLL*HFQEHAKTSSG
Trigger: ACCAGAGGATGTTTTAGCATGCTCTTGGAAGTGGCAGAGGAGCACAGTCACATCTCTCTCGAGACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS GCA 72 bp ACTGAAGATGGGAAACAAACTGTCAGCTCCAAGTTCTaGTTCTGCAGTCCGAAGGTGCAAAGTGGGTCTCGA +
Preference number: 6 (lower is better)
Translates to: TEDGKQTVSSKF*FCSPKVQSGSR
Trigger: TCGAGACCCACTTTGCACCTTCGGACTGCAGAAGCAGAACTTGGAGCTGACAGTTTGTTTCCCATCTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS CCA 72 bp CGCTGCGCTCAACTGCAGTTAACACTTCCCAGTTCATaGTTCAGTTTTAAAGTGTCCAAACTACGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: RCAQLQLTLPSS*FSFKVSKLRPA
Trigger: TGCCGGGCGTAGTTTGGACACTTTAAAACTGAACCATGAACTGGGAAGTGTTAACTGCAGTTGAGCGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592120.5
CDS TCA 72 bp AAAGATATTGCCTACCCCAGGATAGTAAAGAACCAGTaGCTCAGGAGGGTGTGGCTAGGCTCACTTCCTAAC +
Preference number: 6 (lower is better)
Translates to: KDIAYPRIVKNQ*LRRVWLGSLPN
Trigger: GTTAGGAAGTGAGCCTAGCCACACCCTCCTGAGTCACTGGTTCTTTACTATCCTGGGGTAGGCAATATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS CCA 72 bp CTCCCGAGGAAGAGCTGCCAGAAGAAACCCCATGTTTaGAGATTGAGCTGGCAAAGGGATTATTCTTGTAAG +
Preference number: 6 (lower is better)
Translates to: LPRKSCQKKPHV*RLSWQRDYSCK
Trigger: CTTACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS CCA 72 bp CATGGCTACCAACAAGTCTTAGCGGGTGTCACTGCATaGCTTCTGTTAACATTGAAAAGAAGGGCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: HGYQQVLAGVTA*LLLTLKRRARS
Trigger: TGACCTGGCCCTTCTTTTCAATGTTAACAGAAGCCATGCAGTGACACCCGCTAAGACTTGTTGGTAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS TCA 72 bp AACCCCAAGAGTAGAAGTGCGTGTCACCCTGAGTACTaGCAAAGCACAGCCTCAAAGGACAAACCAAAACAA +
Preference number: 6 (lower is better)
Translates to: NPKSRSACHPEY*QSTASKDKPKQ
Trigger: TTGTTTTGGTTTGTCCTTTGAGGCTGTGCTTTGTCAGTACTCAGGGTGACACGCACTTCTACTCTTGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586152.1
CDS CCA 72 bp AGCTGCCAGAAGAAACCCCATGTTTGGAGATTGAGCTaGCAAAGGGATTATTCTTGTAAGATGAGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SCQKKPHVWRLS*QRDYSCKMSLQ
Trigger: CTGCAGGCTCATCTTACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAACATGGGGTTTCTTCTGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
CDS TCA 72 bp CAGGAACAAGCTCATCATACGCCTCAGAGTTATCGATaGAGGAGTCGGATTCATCATAACCATACCCCATAT +
Preference number: 6 (lower is better)
Translates to: QEQAHHTPQSYR*RSRIHHNHTPY
Trigger: ATATGGGGTATGGTTATGATGAATCCGACTCCTTCATCGATAACTCTGAGGCGTATGATGAGCTTGTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS TCA 72 bp TTCCAAGAGCATGCTAAAACATCCTCTGGTCAAACATaGATGTCTGAGCGCCTCAGAGTTATCGATGAAGGA +
Preference number: 6 (lower is better)
Translates to: FQEHAKTSSGQT*MSERLRVIDEG
Trigger: TCCTTCATCGATAACTCTGAGGCGCTCAGACATTCATGTTTGACCAGAGGATGTTTTAGCATGCTCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587027.1
CDS TCA 72 bp GTGTATCCTAGATCCTTGACCTTAAAGAACCCATGCTaGCAGAGCCTTAGACCTCCAAATTGTAAAGACTAC +
Preference number: 6 (lower is better)
Translates to: VYPRSLTLKNPC*QSLRPPNCKDY
Trigger: GTAGTCTTTACAATTTGGAGGTCTAAGGCTCTGTCAGCATGGGTTCTTTAAGGTCAAGGATCTAGGATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396658.8
CDS TCA 72 bp TTTATGCCTTTCCTTTTCTTCGTCATTGAAAGGATCTaGCAGATCTTTCTTCTTATCTCCAGGCTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: FMPFLFFVIERI*QIFLLISRLKA
Trigger: GGCCTTCAGCCTGGAGATAAGAAGAAAGATCTGTCAGATCCTTTCAATGACGAAGAAAAGGAAAGGCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS TCA 72 bp GGGCCTCTACTTTATGCCTTTCCTTTTCTTCGTCATTaGAAGGATCTGACAGATCTTTCTTCTTATCTCCAG +
Preference number: 6 (lower is better)
Translates to: GPLLYAFPFLRH*KDLTDLSSYLQ
Trigger: CTGGAGATAAGAAGAAAGATCTGTCAGATCCTTTCAATGACGAAGAAAAGGAAAGGCATAAAGTAGAGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262376.11
ENST00000396658.8
ENST00000590769.5
ENST00000592120.5
CDS CAA 90 bp TACCAACAAGTCTTAGCGGGTGTCACTGCATGGCTTCTGTTAACATaGAAAAGAAGGGCCAGGTCAAACGAAGATGATAAAATAGTTTAC +
Preference number: 6 (lower is better)
Translates to: YQQVLAGVTAWLLLT*KRRARSNEDDKIVY
Trigger: GTAAACTATTTTATCATCTTCGTTTGACCTGGCCCTTCTTTTCAATGTTAACAGAAGCCATGCAGTGACACCCGCTAAGACTTGTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396658.8