RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBL4A (Homo sapiens)

Ensembl gene IDs: ENSG00000102178

Ensembl transcript IDs: ENST00000369653.8, ENST00000369660.9, ENST00000417913.1, ENST00000477777.1, ENST00000481237.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCTGCCGCACTGAAGTGGCGGGCCAAGACTTTGGAGATCAGCTaGCAGACCTGCGGGGGTGGGGAGTCGGCCAGCCTCTGGGCCTCG +
Preference number: 1 (lower is better)
Translates to: ASAALKWRAKTLEIS*QTCGGGESASLWAS
Trigger: CGAGGCCCAGAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CCA 90 bp GCTCACTTGGCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTaGCTTCCTTCCAGCCTCTACCACCCCTGGGGGCCTCCTCCAAGG +
Preference number: 1 (lower is better)
Translates to: AHLARVKGRSGVLLM*LPSSLYHPWGPPPR
Trigger: CCTTGGAGGAGGCCCCCAGGGGTGGTAGAGGCTGGAAGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 90 bp CGCTGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTGCCTCTaGTGTGCCGGCTCTCCTCTTCTGAGGGTGTGGAAGCAAACCCAG +
Preference number: 1 (lower is better)
Translates to: RWIPTGAVPLHRRCL*CAGSPLLRVWKQTQ
Trigger: CTGGGTTTGCTTCCACACCCTCAGAAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp GCGGCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTaGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: AAPSSFSHQGTFRSR*IPTGAVPLHRRCLC
Trigger: GCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 90 bp AGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTaGCTCTGCTGTGCCGGCTCTCCTCTTCTGAGGGTGTGGAAGCAA +
Preference number: 1 (lower is better)
Translates to: RSRWIPTGAVPLHRR*LCCAGSPLLRVWKQ
Trigger: TTGCTTCCACACCCTCAGAAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp CTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTaGGGCTGTGCCACTTCATCGCCGGTGCCTCTGCTGTGCCGGCTC +
Preference number: 1 (lower is better)
Translates to: LLLTPRHFQKPLDSD*GCATSSPVPLLCRL
Trigger: GAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp GACCACACTGTGAGCAGCTCACTTGGCAAGGGTGAAGGGCCGGAGTaGCGTCCTCCTGATGTGGCTTCCTTCCAGCCTCTACCACCCCTG +
Preference number: 1 (lower is better)
Translates to: DHTVSSSLGKGEGPE*RPPDVASFQPLPPL
Trigger: CAGGGGTGGTAGAGGCTGGAAGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGCTGCTCACAGTGTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp CTCTGTAGCTGTTCCAGGACCCTGCTGGCATCTGCCGCACTGAAGTaGCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGT +
Preference number: 1 (lower is better)
Translates to: LCSCSRTLLASAALK*RAKTLEISCQTCGG
Trigger: ACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTCCTGGAACAGCTACAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR TCA 90 bp CCAGTGCTGGGGATGAGGACAAAGGCCTACGCCCAGTCCCAGCTCTaGCACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGG +
Preference number: 1 (lower is better)
Translates to: PVLGMRTKAYAQSQL*HCLAESPISPNASW
Trigger: CCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTCAGAGCTGGGACTGGGCGTAGGCCTTTGTCCTCATCCCCAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 90 bp CACACACACGGCAGGGTGGAGGAGGATGAACCGGAACCCAGTCCATaGTTCTGCCCCCACCCTGGCACCCCAAGGTTTCTTCTCAGGCAA +
Preference number: 1 (lower is better)
Translates to: HTHGRVEEDEPEPSP*FCPHPGTPRFLLRQ
Trigger: TTGCCTGAGAAGAAACCTTGGGGTGCCAGGGTGGGGGCAGAAGCATGGACTGGGTTCCGGTTCATCCTCCTCCACCCTGCCGTGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp GAGCAGGTGGTTAGATGTCCTCTTGTGCCCACACACACGGCAGGGTaGAGGAGGATGAACCGGAACCCAGTCCATGCTTCTGCCCCCACC +
Preference number: 1 (lower is better)
Translates to: EQVVRCPLVPTHTAG*RRMNRNPVHASAPT
Trigger: GGTGGGGGCAGAAGCATGGACTGGGTTCCGGTTCATCCTCCTCCACCCTGCCGTGTGTGTGGGCACAAGAGGACATCTAACCACCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp AGCCCTTCTCCATTGTCTCAGTCACTTCAGGGTGCAGGAAGCGGCTaGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACC +
Preference number: 1 (lower is better)
Translates to: SPSPLSQSLQGAGSG*PTVRCRPASGDSGT
Trigger: GGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGAGACAATGGAGAAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR TCA 90 bp AATCCCTCTGTAGCTGTTCCAGGACCCTGCTGGCATCTGCCGCACTaGAGTGGCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCG +
Preference number: 1 (lower is better)
Translates to: NPSVAVPGPCWHLPH*SGGPRLWRSAARPA
Trigger: CGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTCCTGGAACAGCTACAGAGGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CCA 90 bp GAGAGGGGCCCTGTGAGACAGAGGACACTGACTCAGGTCGGTGAGTaGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACT +
Preference number: 1 (lower is better)
Translates to: ERGPVRQRTLTQVGE*PSLYRVHGWGPSGT
Trigger: AGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACTCACCGACCTGAGTCAGTGTCCTCTGTCTCACAGGGCCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR TCA 90 bp GGCTCTCCTCTTCTGAGGGTGTGGAAGCAAACCCAGGTCAAGCTGTaGGGAGTGCCTAGCACCTGGCCAGAGCCAGGTACATGCCAGCTA +
Preference number: 1 (lower is better)
Translates to: GSPLLRVWKQTQVKL*GVPSTWPEPGTCQL
Trigger: TAGCTGGCATGTACCTGGCTCTGGCCAGGTGCTAGGCACTCCTCACAGCTTGACCTGGGTTTGCTTCCACACCCTCAGAAGAGGAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR TCA 90 bp TGGCTGGGATATGTTCATCTTCCACAGGGAGGCCAGTGCTGGGGATaGGGACAAAGGCCTACGCCCAGTCCCAGCTCTGACACTGCCTTG +
Preference number: 1 (lower is better)
Translates to: WLGYVHLPQGGQCWG*GQRPTPSPSSDTAL
Trigger: CAAGGCAGTGTCAGAGCTGGGACTGGGCGTAGGCCTTTGTCCTCATCCCCAGCACTGGCCTCCCTGTGGAAGATGAACATATCCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp TCCCTTTCAGGATCGGGAGGGAGTCACCTGAGGGTATATTCTCAGTaGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCC +
Preference number: 1 (lower is better)
Translates to: SLSGSGGSHLRVYSQ*AKHDMREPSSPSGP
Trigger: GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCCTGAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp GCCGTAGGTGGCTTTGAAGCCATATACATGGCTCTCCAGCTCTCGTaGGGGGCCAGGGGCTTCTGTGTGCTCTTCAAAGCCTTCACCCAT +
Preference number: 1 (lower is better)
Translates to: AVGGFEAIYMALQLS*GARGFCVLFKAFTH
Trigger: ATGGGTGAAGGCTTTGAAGAGCACACAGAAGCCCCTGGCCCCCCACGAGAGCTGGAGAGCCATGTATATGGCTTCAAAGCCACCTACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp CTGACTCAGGTCGGTGAGTGGCCCTCACTGTATAGAGTCCATGGCTaGGGACCAAGTGGCACTGAGACTCGCCCAAAGTCACATCACAGA +
Preference number: 1 (lower is better)
Translates to: LTQVGEWPSLYRVHG*GPSGTETRPKSHHR
Trigger: TCTGTGATGTGACTTTGGGCGAGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACTCACCGACCTGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp CAGGCAACAAGGAGCACACAAAGTGAGCCCCTGTACACAGGTGGCTaGGATATGTTCATCTTCCACAGGGAGGCCAGTGCTGGGGATGAG +
Preference number: 1 (lower is better)
Translates to: QATRSTQSEPLYTGG*DMFIFHREASAGDE
Trigger: CTCATCCCCAGCACTGGCCTCCCTGTGGAAGATGAACATATCCCAGCCACCTGTGTACAGGGGCTCACTTTGTGTGCTCCTTGTTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 90 bp GGCCAGAGCCAGGTACATGCCAGCTATGATGATGATGAGCCCAACTaGAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGG +
Preference number: 1 (lower is better)
Translates to: GQSQVHASYDDDEPN*NRRTHLVRHAAVAW
Trigger: CCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATCATCATAGCTGGCATGTACCTGGCTCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
3UTR GCA 90 bp TTCTATTTGGAGAAGCCCTTCTCCATTGTCTCAGTCACTTCAGGGTaGAGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGG +
Preference number: 1 (lower is better)
Translates to: FYLEKPFSIVSVTSG*RKRLANRSMSSSVR
Trigger: CCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGAGACAATGGAGAAGGGCTTCTCCAAATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CCA 90 bp GGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTaGAGAAGCCCTTCTCCATTGTCTCAGTCACTTCAGGGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: GSLALGTSPCSENSI*RSPSPLSQSLQGAG
Trigger: TCCTGCACCCTGAAGTGACTGAGACAATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CCA 90 bp AACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTaGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCTT +
Preference number: 1 (lower is better)
Translates to: NRRTHLVRHAAVAWR*APPHAPRILFGEAL
Trigger: AAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR TCA 90 bp TCAGGTGACAGCTGCTTTCCCTTTCAGGATCGGGAGGGAGTCACCTaGGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCA +
Preference number: 1 (lower is better)
Translates to: SGDSCFPFQDREGVT*GYILSGLNMTCESP
Trigger: TGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCCTGAAAGGGAAAGCAGCTGTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 90 bp AACTGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTaGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAA +
Preference number: 1 (lower is better)
Translates to: NCNRRTHLVRHAAVA*RWAPPHAPRILFGE
Trigger: TTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR TCA 90 bp ATTTCCTGGCACCACACAAACAAGAACACTGGTAAATGTATCACCTaGACTGCAGGCCACACATGCTCACGAGTGTGTCCCTGCCGTAGG +
Preference number: 1 (lower is better)
Translates to: ISWHHTNKNTGKCIT*TAGHTCSRVCPCRR
Trigger: CCTACGGCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATACATTTACCAGTGTTCTTGTTTGTGTGGTGCCAGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGCGCGGTAGCCTGGCGTTaGGCACCTCCCCATGCTCCG +
Preference number: 2 (lower is better)
Translates to: AGQDFGDQLPDLRGWGVGAVAWR*APPHAP
Trigger: CGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGC...GCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CAA 90 bp AGGACCCTGCTGGCATCTGCCGCACTGAAGTGGCGGGCCAAGACTTaGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: RTLLASAALKWRAKT*EISCQTCGGGESAS
Trigger: GCTGGCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR GCA 90 bp AGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACACTTTGGAGATCAGCTaGCAGACCTGCGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RKRLANRSMSSSVRRLRDTLEIS*QTCGGG
Trigger: CCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGT...GTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR TCA 90 bp ACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCACCCAGGTCAAGCTGTaGGGAGTGCCTAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: TLSATCSGSLALGTSPCSTQVKL*GVPSTW
Trigger: CCAGGTGCTAGGCACTCCTCACAGCTTGACCTGGGT...GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
3UTR-3UTR CCA 90 bp GCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCTTCTCCACCAGACCTGCGGGGGTaGGGAGTCGGCCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: ALGTSPCSENSIWRSPSPPDLRG*GVGQPL
Trigger: CAGAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGG...TGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR TCA 90 bp GAGTGGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACTGAGACTGCTGGGGTGCCTTGCTaGCTCCCTGGCCCCAATCTG +
Preference number: 2 (lower is better)
Translates to: EWPSLYRVHGWGPSGTETAGVPC*LPGPNL
Trigger: CAGATTGGGGCCAGGGAGTCAGCAAGGCACCCCAGC...AGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR TCA 90 bp CCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACCTCTCGTAATCCCTCTGTGGCATCTGCCGCACTaGAGTGGCGGGCCAAGACTT +
Preference number: 2 (lower is better)
Translates to: PFDVVQRQATQGPLVIPLWHLPH*SGGPRL
Trigger: AAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCA...CAGAGGGATTACGAGAGGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR GCA 90 bp TGCAGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGACACTTAGTGCGACATaGAGCGGTAGCCTGGCGTTG +
Preference number: 2 (lower is better)
Translates to: CRKRLANRSMSSSVRRLRTLSAT*SGSLAL
Trigger: CAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT...CCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCTGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR GCA 90 bp GGGCCAGGGGCTTCTGTGTGCTCTTCAAAGCCTTCACCCATTGGGCCTCTGTCCATCACAGAGCTGGGGTaGCTTGCTGACTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GPGASVCSSKPSPIGPLSITELG*LADSLA
Trigger: GGCCAGGGAGTCAGCAAGGCACCCCAGCTCTGTGAT...GGACAGAGGCCCAATGGGTGAAGGCTTTGAAGAGCACACAGAAGCCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp CCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTCATCGCCGGTGCCTCTaGTGTGCCGGCTCTCCTCTT +
Preference number: 2 (lower is better)
Translates to: PNCNRRTHLVRHAAVAWRHRRCL*CAGSPL
Trigger: AAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATG...ACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp GGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGGCTGCAGCCCACTTCATCGCCGGTaGCTCTGCTGTGCCGGCTCT +
Preference number: 2 (lower is better)
Translates to: GPNLLFHLSNAHWHTGCSPLHRR*LCCAGS
Trigger: AGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGG...GCTGCAGCCAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp CCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTTCCGACTGGGGCTGTaGCACTTCATCGCCGGTGCC +
Preference number: 2 (lower is better)
Translates to: PNCNRRTHLVRHAAVAWRFRLGL*HFIAGA
Trigger: GGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAA...ACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp GGACAAAGGCCTACGCCCAGTCCCAGCTCTGACACTGCCTTGCTGAGTCACCCATGTCACTTGGCCTCCTaGAGAGGTAAGCTGAGGGCT +
Preference number: 2 (lower is better)
Translates to: GQRPTPSPSSDTALLSHPCHLAS*RGKLRA
Trigger: AGCCCTCAGCTTACCTCTGCAGGAGGCCAAGTGACA...TGGGTGACTCAGCAAGGCAGTGTCAGAGCTGGGACTGGGCGTAGGCCTTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGCAGATACATGCAGCGGTAGCCTaGCGTTGGGCACCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: ALLSHPSALTLPGRDKQIHAAVA*RWAPPH
Trigger: ATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATG...TATCTGCTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GAGTGGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACTGAGACTGGGCTGGCTGTCACTTaGCCTCCTGCAGAGGTAAGC +
Preference number: 2 (lower is better)
Translates to: EWPSLYRVHGWGPSGTETGLAVT*PPAEVS
Trigger: GCTTACCTCTGCAGGAGGCCAAGTGACAGCCAGCCC...AGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGTTGTCGAACGCACACTaGCACACTGGCTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VREGFRGSCRQPSFHPRRLSNAH*HTGCSS
Trigger: GCTGCTGCAGCCAGTGTGCCAGTGTGCGTTCGACAA...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR TCA 90 bp GACTCCCTGGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGCCGGCTCTCCTCTTCTaGGGGTGTGGAAGCAAACCC +
Preference number: 2 (lower is better)
Translates to: DSLAPICFSICRTHTGTLPALLF*GCGSKP
Trigger: GGGTTTGCTTCCACACCCTCAGAAGAGGAGAGCCGG...CAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCCAGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp GACACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGTCAAGCTGTGAGGAGTaGCTAGCACCTGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: DTALLSHPSALTLPGRDKSSCEE*LAPGQS
Trigger: GCTCTGGCCAGGTGCTAGGCACTCCTCACAGCTTGA...CTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp GTATCACCTGAACTGCAGGCCACACATGCTCACGAGTGTGTCCCTGCCGTAGGTTGGGGACCCAATATTTaGCCCACAAGGCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VSPELQATHAHECVPAVGWGPNI*PTRPRQ
Trigger: CTGCCTGGGCCTTGTGGGGCAAATATTGGGTCCCCA...ACCTACGGCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp CACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACGCGGTAGCCTGGCGTTaGGCACCTCCCCATGCTCCG +
Preference number: 2 (lower is better)
Translates to: HWVKLLTCCQCQYHWTFHAVAWR*APPHAP
Trigger: CGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGC...GTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GTATCACCTGAACTGCAGGCCACACATGCTCACGAGTGTGTCCCTGCCGTAGGTGTCACATCACAGAGCTaGGGTGCCTTGCTGACTCCC +
Preference number: 2 (lower is better)
Translates to: VSPELQATHAHECVPAVGVTSQS*GALLTP
Trigger: GGGAGTCAGCAAGGCACCCCAGCTCTGTGATGTGAC...ACCTACGGCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCTTCTCCAGAGTCGGCCAGCCTCTaGGCCTCGCCTTCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: ALGTSPCSENSIWRSPSPESASL*ASPSSS
Trigger: ACTAGAAGAAGGCGAGGCCCAGAGGCTGGCCGACTC...TGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR CCA 90 bp GTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCTCTGCCGCACTGAAGTaGCGGGCCAAGACTTTGGAG +
Preference number: 2 (lower is better)
Translates to: VAWRWAPPHAPRILFGEASAALK*RAKTLE
Trigger: CTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGA...GGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR CCA 90 bp TCGGAGGTGGTGGCCTGGGATGTAGCAGATACCAACGCAGAGGGAGGCAGAAGAACTCAGGTCGGTGAGTaGCCCTCACTGTATAGAGTC +
Preference number: 2 (lower is better)
Translates to: SEVVAWDVADTNAEGGRRTQVGE*PSLYRV
Trigger: GACTCTATACAGTGAGGGCCACTCACCGACCTGAGT...TCTTCTGCCTCCCTCTGCGTTGGTATCTGCTACATCCCAGGCCACCACCTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CAA 90 bp CAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTaGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: QQENTLSATCSGSLA*GTSPCSENSIWRSP
Trigger: AGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CAA 90 bp ACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCTTCTCCATaGTCTCAGTCACTTCAGGGTGCAGGAAGCGGCTGGCCAACCGTT +
Preference number: 2 (lower is better)
Translates to: TSPCSENSIWRSPSP*SQSLQGAGSGWPTV
Trigger: AACGGTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGAGACAATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR GCA 90 bp GACACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGAAGTCAGGTGACAGCTaGTTTCCCTTTCAGGATCGG +
Preference number: 2 (lower is better)
Translates to: DTALLSHPSALTLPGRDKKSGDS*FPFQDR
Trigger: CCGATCCTGAAAGGGAAAGCAGCTGTCACCTGACTT...CTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR TCA 90 bp ACACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCAACCCAGGTCAAGCTGTaGGGAGTGCCTAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: TLGEIAHLLPMPIPLDFSTQVKL*GVPSTW
Trigger: CCAGGTGCTAGGCACTCCTCACAGCTTGACCTGGGT...TGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR TCA 90 bp ACACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCAGCCCTGACCACACTGTaGGCAGCTCACTTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: TLGEIAHLLPMPIPLDFSALTTL*AAHLAR
Trigger: CCTTGCCAAGTGAGCTGCTCACAGTGTGGTCAGGGC...TGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp TCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCGATGATGAGCCCAACTaGAACAGGAGAACACACTTA +
Preference number: 2 (lower is better)
Translates to: SQWAKHDMREPSSPSGPFDDEPN*NRRTHL
Trigger: TAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATC...GAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp GCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGATGATGAGCCCAACTaGAACAGGAGAACACACTTA +
Preference number: 2 (lower is better)
Translates to: AAVAWRWAPPHAPRILFGDDEPN*NRRTHL
Trigger: TAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATC...TCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CAA 90 bp CATCTCTGGGTCACACTTGGCCACGGCTTCATTTTTGGCTTCAGTTaGTTTACTGAACAGAAGGGAGAGGGGCCCTGTGAGACAGAGGAC +
Preference number: 2 (lower is better)
Translates to: HLWVTLGHGFIFGFS*FTEQKGEGPCETED
Trigger: GTCCTCTGTCTCACAGGGCCCCTCTCCCTTCTGTTCAGTAAACAAACTGAAGCCAAAAATGAAGCCGTGGCCAAGTGTGACCCAGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp AGAGCCAGGTACATGCCAGCTATGATGATGATGAGCCCAACTGCAACAGGAGAAACTTTCAGAAGCCGCTaGATTCCGACTGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: RARYMPAMMMMSPTATGETFRSR*IPTGAV
Trigger: CACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGT...TTCTCCTGTTGCAGTTGGGCTCATCATCATCATAGCTGGCATGTACCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp ACACAGGTGGCTGGGATATGTTCATCTTCCACAGGGAGGCCAGTGCTGGGGATGAGGGTATATTCTCAGTaGGCTAAACATGACATGCGA +
Preference number: 2 (lower is better)
Translates to: TQVAGICSSSTGRPVLGMRVYSQ*AKHDMR
Trigger: TCGCATGTCATGTTTAGCCCACTGAGAATATACCCT...CATCCCCAGCACTGGCCTCCCTGTGGAAGATGAACATATCCCAGCCACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR TCA 90 bp CACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACTGCCGTAGGTGGCTTTaGAGCCATATACATGGCTCT +
Preference number: 2 (lower is better)
Translates to: HWVKLLTCCQCQYHWTFHCRRWL*SHIHGS
Trigger: AGAGCCATGTATATGGCTTCAAAGCCACCTACGGCA...GTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR GCA 90 bp GGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACTTTCAGGGCTAAACATGACATaGGAGAGCCCAGCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: GEIAHLLPMPIPLDFSLSGLNMT*ESPALQ
Trigger: TTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCC...TGAAAGTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CCA 90 bp GGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACTTTCACCTCTTCTGAGGGTGTaGAAGCAAACCCAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: GEIAHLLPMPIPLDFSLSPLLRV*KQTQVK
Trigger: CTTGACCTGGGTTTGCTTCCACACCCTCAGAAGAGG...TGAAAGTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp GCACTGAAGTGGCGGGCCAAGACTTTGGAGATCAGCTaGCAGACCTGCGGGGGTGGGGAGTCGGCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: ALKWRAKTLEIS*QTCGGGESASL
Trigger: GAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CCA 72 bp GCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTaGCTTCCTTCCAGCCTCTACCACCCCTGGGGGCCT +
Preference number: 3 (lower is better)
Translates to: ARVKGRSGVLLM*LPSSLYHPWGP
Trigger: AGGCCCCCAGGGGTGGTAGAGGCTGGAAGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR-3UTR CAA 90 bp TTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAAGCGGTAGCCTGGCGTaGGGCACCTCCCCATGCTCC +
Preference number: 3 (lower is better)
Translates to: LVRHAAVAWRWAPPHAPRSGSLA*GTSPCS
Trigger: GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCT...TCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
3UTR GCA 72 bp CCGACTGGGGCTGTGCCACTTCATCGCCGGTGCCTCTaGTGTGCCGGCTCTCCTCTTCTGAGGGTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: PTGAVPLHRRCL*CAGSPLLRVWK
Trigger: CTTCCACACCCTCAGAAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp CAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTaGGGAGTCGGCCAGCCTCTGGGCCTCGCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: QDFGDQLPDLRG*GVGQPLGLAFF
Trigger: GAAGAAGGCGAGGCCCAGAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR CAA 90 bp TGTTCCAGGACCCTGCTGGCATCTGCCGCACTGAAGTGGCGGGCCAAGACTTTGAGCGGTAGCCTGGCGTaGGGCACCTCCCCATGCTCC +
Preference number: 3 (lower is better)
Translates to: CSRTLLASAALKWRAKTLSGSLA*GTSPCS
Trigger: GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCT...CAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTCCTGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR GCA 72 bp TGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTaGCTCTGCTGTGCCGGCTCTCCTCTTCTGAGGGTG +
Preference number: 3 (lower is better)
Translates to: WIPTGAVPLHRR*LCCAGSPLLRV
Trigger: CACCCTCAGAAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp GCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTaGCACTTCATCGCCGGTGCCTCTGCTGTGCCGGCT +
Preference number: 3 (lower is better)
Translates to: ALSEAAGFRLGL*HFIAGASAVPA
Trigger: AGCCGGCACAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp GGCAGGGTGGAGGAGGATGAACCGGAACCCAGTCCATaGTTCTGCCCCCACCCTGGCACCCCAAGGTTTCTT +
Preference number: 3 (lower is better)
Translates to: GRVEEDEPEPSP*FCPHPGTPRFL
Trigger: AAGAAACCTTGGGGTGCCAGGGTGGGGGCAGAAGCATGGACTGGGTTCCGGTTCATCCTCCTCCACCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp CCTCTGTCCATCTTTCCAGCCTGGGGACCCAATATTTaGCCCACAAGGCCCAGGCAGGAGGGCCTCCAGCAC +
Preference number: 3 (lower is better)
Translates to: PLSIFPAWGPNI*PTRPRQEGLQH
Trigger: GTGCTGGAGGCCCTCCTGCCTGGGCCTTGTGGGGCAAATATTGGGTCCCCAGGCTGGAAAGATGGACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp GCCCAACTGCAACAGGAGAACACACTTAGTGCGACATaGAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGC +
Preference number: 3 (lower is better)
Translates to: AQLQQENTLSAT*SGSLALGTSPC
Trigger: GCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
3UTR CCA 72 bp ACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTaGGGCTGTGCCACTTCATCGCCGGTGCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: TPRHFQKPLDSD*GCATSSPVPLL
Trigger: CAGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp GTGAGCAGCTCACTTGGCAAGGGTGAAGGGCCGGAGTaGCGTCCTCCTGATGTGGCTTCCTTCCAGCCTCTA +
Preference number: 3 (lower is better)
Translates to: VSSSLGKGEGPE*RPPDVASFQPL
Trigger: TAGAGGCTGGAAGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGCTGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp TCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTaGATTCCGACTGGGGCTGTGCCACTTCATCGCCGG +
Preference number: 3 (lower is better)
Translates to: SSFSHQGTFRSR*IPTGAVPLHRR
Trigger: CCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp GTCGGTGAGTGGCCCTCACTGTATAGAGTCCATGGCTaGGGACCAAGTGGCACTGAGACTCGCCCAAAGTCA +
Preference number: 3 (lower is better)
Translates to: VGEWPSLYRVHG*GPSGTETRPKS
Trigger: TGACTTTGGGCGAGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACTCACCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp CCTGTGAGACAGAGGACACTGACTCAGGTCGGTGAGTaGCCCTCACTGTATAGAGTCCATGGCTGGGGACCA +
Preference number: 3 (lower is better)
Translates to: PVRQRTLTQVGE*PSLYRVHGWGP
Trigger: TGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACTCACCGACCTGAGTCAGTGTCCTCTGTCTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp TGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTaGACGAGACAAGCAGATAGGGTGCCCCAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: CLAESPISPNAS*TRQADRVPQRG
Trigger: TCCTCTCTGGGGCACCCTATCTGCTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp GGCTTTGAAGCCATATACATGGCTCTCCAGCTCTCGTaGGGGGCCAGGGGCTTCTGTGTGCTCTTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: GFEAIYMALQLS*GARGFCVLFKA
Trigger: GGCTTTGAAGAGCACACAGAAGCCCCTGGCCCCCCACGAGAGCTGGAGAGCCATGTATATGGCTTCAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp CAGGCAGCCATCTTTTCATCCTCGGAGGTGGTGGCCTaGGATGTAGCAGATACCAACGCAGAGGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: QAAIFSSSEVVA*DVADTNAEGGR
Trigger: TCTGCCTCCCTCTGCGTTGGTATCTGCTACATCCCAGGCCACCACCTCCGAGGATGAAAAGATGGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR TCA 72 bp ACATGCTCACGAGTGTGTCCCTGCCGTAGGTGGCTTTaGAGCCATATACATGGCTCTCCAGCTCTCGTGGGG +
Preference number: 3 (lower is better)
Translates to: TCSRVCPCRRWL*SHIHGSPALVG
Trigger: CCCCACGAGAGCTGGAGAGCCATGTATATGGCTTCAAAGCCACCTACGGCAGGGACACACTCGTGAGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp GTTAGATGTCCTCTTGTGCCCACACACACGGCAGGGTaGAGGAGGATGAACCGGAACCCAGTCCATGCTTCT +
Preference number: 3 (lower is better)
Translates to: VRCPLVPTHTAG*RRMNRNPVHAS
Trigger: AGAAGCATGGACTGGGTTCCGGTTCATCCTCCTCCACCCTGCCGTGTGTGTGGGCACAAGAGGACATCTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp AGGGGCTTCTGTGTGCTCTTCAAAGCCTTCACCCATTaGGCCTCTGTCCATCTTTCCAGCCTGGGGACCCAA +
Preference number: 3 (lower is better)
Translates to: RGFCVLFKAFTH*ASVHLSSLGTQ
Trigger: TTGGGTCCCCAGGCTGGAAAGATGGACAGAGGCCCAATGGGTGAAGGCTTTGAAGAGCACACAGAAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp AGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTaGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTA +
Preference number: 3 (lower is better)
Translates to: RRTHLVRHAAVA*RWAPPHAPRIL
Trigger: TAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CCA 72 bp GGATCGGGAGGGAGTCACCTGAGGGTATATTCTCAGTaGGCTAAACATGACATGCGAGAGCCCAGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: GSGGSHLRVYSQ*AKHDMREPSSP
Trigger: TGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp AGGAGCACACAAAGTGAGCCCCTGTACACAGGTGGCTaGGATATGTTCATCTTCCACAGGGAGGCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: RSTQSEPLYTGG*DMFIFHREASA
Trigger: AGCACTGGCCTCCCTGTGGAAGATGAACATATCCCAGCCACCTGTGTACAGGGGCTCACTTTGTGTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp ACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTaGGCACCTCCCCATGCTCCGAGAATTCTATTTGGA +
Preference number: 3 (lower is better)
Translates to: THLVRHAAVAWR*APPHAPRILFG
Trigger: TCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR-3UTR CAA 90 bp GGACAAAGGCCTACGCCCAGTCCCAGCTCTGACACTGCCTTGCTGAGTCACCCAGCCACGGCTTCATTTTaGGCTTCAGTTTGTTTACTG +
Preference number: 3 (lower is better)
Translates to: GQRPTPSPSSDTALLSHPATASF*ASVCLL
Trigger: CAGTAAACAAACTGAAGCCAAAAATGAAGCCGTGGC...TGGGTGACTCAGCAAGGCAGTGTCAGAGCTGGGACTGGGCGTAGGCCTTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR TCA 72 bp AGCTGCTTTCCCTTTCAGGATCGGGAGGGAGTCACCTaGGGGTATATTCTCAGTGGGCTAAACATGACATGC +
Preference number: 3 (lower is better)
Translates to: SCFPFQDREGVT*GYILSGLNMTC
Trigger: GCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCCTGAAAGGGAAAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp CAGGTACATGCCAGCTATGATGATGATGAGCCCAACTaGAACAGGAGAACACACTTAGTGCGACATGCAGCG +
Preference number: 3 (lower is better)
Translates to: QVHASYDDDEPN*NRRTHLVRHAA
Trigger: CGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATCATCATAGCTGGCATGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
3UTR TCA 72 bp CACCACACAAACAAGAACACTGGTAAATGTATCACCTaGACTGCAGGCCACACATGCTCACGAGTGTGTCCC +
Preference number: 3 (lower is better)
Translates to: HHTNKNTGKCIT*TAGHTCSRVCP
Trigger: GGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATACATTTACCAGTGTTCTTGTTTGTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR GCA 72 bp AGAAGACACTGGGTGAAATTGCTCACCTGCTGCCAATaGCAATACCACTGGACTTTTCACTTTCATAAGCCA +
Preference number: 3 (lower is better)
Translates to: RRHWVKLLTCCQ*QYHWTFHFHKP
Trigger: TGGCTTATGAAAGTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CCA 72 bp GTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTaGACTTTTCACTTTCATAAGCCAAGAAATTTCCGT +
Preference number: 3 (lower is better)
Translates to: VKLLTCCQCQYH*TFHFHKPRNFR
Trigger: ACGGAAATTTCTTGGCTTATGAAAGTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp GCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACCTCTCCCAGGGCCTTGCCCTTaGACAGCAGCCGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AAGQPFDVVQRQATQGPLPGPCP*TAAAAG
Trigger: GCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGG...GAGAGGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp GGCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGAACAGCAGCCGCTGCTaGCGCACTGGGACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GGPRLWRSAARPAGVGSRNSSRC*RTGTFS
Trigger: GCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTT...CCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp GCTCACTTGGCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTGGCTTCCTCCAGACCTGCGGGGGTaGGGAGTCGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AHLARVKGRSGVLLMWLPPDLRG*GVGQPL
Trigger: CAGAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGG...AGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CAGGGTGCAGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACCCGCTGCTGGCGCACTaGGACGTTCAGCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: QGAGSGWPTVRCRPASGDPLLAH*DVQLLG
Trigger: TCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGG...GTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
3UTR CAA 72 bp CTGGCATCTGCCGCACTGAAGTGGCGGGCCAAGACTTaGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LASAALKWRAKT*EISCQTCGGGE
Trigger: CTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR TCA 90 bp GGACAAAGGCCTACGCCCAGTCCCAGCTCTGACACTGCCTTGCTGAGTCACCCACCAGGGCCTTGCCCTTaGACAGCAGCCGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQRPTPSPSSDTALLSHPPGPCP*TAAAAG
Trigger: GCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGG...TGGGTGACTCAGCAAGGCAGTGTCAGAGCTGGGACTGGGCGTAGGCCTTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCTGGCACCTGCAGGCTaGACTCGCGGCCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PSHTKALSEAAGFRLGLCLAPAG*TRGPAA
Trigger: CGCTGCAGGGCCGCGAGTGCAGCCTGCAGGTGCCAG...GCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATCGTCCTCTGGCACCTaGAGGCTGCACTCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RHAAVAWRWAPPHAPRILSSSGT*RLHSRP
Trigger: GGGCCGCGAGTGCAGCCTGCAGGTGCCAGAGGACGA...TAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp CCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGCCAGCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTC +
Preference number: 4 (lower is better)
Translates to: PRLWRSAARPAGVGSRPALNSSR*WRTGTF
Trigger: GAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAA...GGCTGGCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp CTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGTTCCGACTGGGGCTGTaGCACTTCATCGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSATCSGSLALGTSPCSEFRLGL*HFIAGA
Trigger: GGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAA...CTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp ACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGCTGCGGCATCCGGCTaGCAGGGCCTTGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: TLSATCSGSLALGTSPCSAAASG*QGLALE
Trigger: TTCAAGGGCAAGGCCCTGGCAGCCGGATGCCGCAGC...GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp CAGGGTGCAGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACCCAGCTGCTTCAGCGTaGACACCAGCTCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QGAGSGWPTVRCRPASGDPAASA*TPARPL
Trigger: CAGAGGACGAGCTGGTGTCCACGCTGAAGCAGCTGG...GTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp CTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCCCAGACCTGCGGGGGTaGGGAGTCGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLTPRHFQKPLDSDWGCAPDLRG*GVGQPL
Trigger: CAGAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGG...GGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp CGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACCTCTCGGGAGTGCCTAGCACCTaGCCAGAGCCAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: RLANRSMSSSVRRLRDLSGVPST*PEPGTC
Trigger: GCATGTACCTGGCTCTGGCCAGGTGCTAGGCACTCC...CGAGAGGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp AACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCGCGGTAGCCTGGCGTTaGGCACCTCCCCATGCTCCG +
Preference number: 4 (lower is better)
Translates to: NTLSATCSGSLALGTSPCAVAWR*APPHAP
Trigger: CGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGC...GCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR TCA 90 bp CTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCCCAGGGCCTTGCCCTTaGACAGCAGCCGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLTPRHFQKPLDSDWGCAPGPCP*TAAAAG
Trigger: GCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGG...GGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR TCA 90 bp AAGTGGCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGACCCAGGTCAAGCTGTaGGGAGTGCCTAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: KWRAKTLEISCQTCGGGETQVKL*GVPSTW
Trigger: CCAGGTGCTAGGCACTCCTCACAGCTTGACCTGGGT...CTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR TCA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCAGCTGGGGTGCCTTGCTaGCTCCCTGGCCCCAATCTG +
Preference number: 4 (lower is better)
Translates to: ENTLSATCSGSLALGTSPAGVPC*LPGPNL
Trigger: CAGATTGGGGCCAGGGAGTCAGCAAGGCACCCCAGC...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp CTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCCTCACTTGGCAAGGGTaGAGGGCCGGAGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LSGLNMTCESPALQAAPSLTWQG*RAGVAS
Trigger: GGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAG...GGAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTCTGGCACCTGCAGGCTaGACTCGCGGCCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSFSHQGTFRSRWIPTGALAPAG*TRGPAA
Trigger: CGCTGCAGGGCCGCGAGTGCAGCCTGCAGGTGCCAG...AGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTCTGGCACCTGCAGGCTaGACTCGCGGCCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PNCNRRTHLVRHAAVAWRLAPAG*TRGPAA
Trigger: CGCTGCAGGGCCGCGAGTGCAGCCTGCAGGTGCCAG...ACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR GCA 90 bp CCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCTCGTCCTCTGGCACCTaGAGGCTGCACTCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PSHTKALSEAAGFRLGLCSSSGT*RLHSRP
Trigger: GGGCCGCGAGTGCAGCCTGCAGGTGCCAGAGGACGA...GCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCTCGTCCTCTGGCACCTaGAGGCTGCACTCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LLTPRHFQKPLDSDWGCASSSGT*RLHSRP
Trigger: GGGCCGCGAGTGCAGCCTGCAGGTGCCAGAGGACGA...GGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCGACCCTGCTGGCATCTaGCGCACTGAAGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LSGLNMTCESPALQAAPSDPAGI*RTEVAG
Trigger: GCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTC...GGAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp GCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGCCAGCTCAGTCACTTCAGGGTaGAGGAAGCGGCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: AKTLEISCQTCGGGESASSVTSG*RKRLAN
Trigger: GTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGA...GCTGGCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGCACTGGCACACTGGCTaGAGCAGCTGCGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: VREGFRGSCRQPSFHPRRHWHTG*SSCGGR
Trigger: CCGACCCCCGCAGCTGCTGCAGCCAGTGTGCCAGTG...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGGCGGTAGCCTGGCGTTaGGCACCTCCCCATGCTCCG +
Preference number: 4 (lower is better)
Translates to: PPSHTKALSEAAGFRLGLAVAWR*APPHAP
Trigger: CGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGC...CAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TGGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACTGAGACTCGCCGCACACTGGCACACTaGCTGCAGCAGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSLYRVHGWGPSGTETRRTLAH*LQQLRG
Trigger: CCCCCGCAGCTGCTGCAGCCAGTGTGCCAGTGTGCG...GCGAGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp ATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTGCCTTCACCGTCAGCTaGATGGCGGTCGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: ILSGLNMTCESPALQAAPAFTVS*MAVATA
Trigger: CGCCGTCGCGACCGCCATGCAGCTGACGGTGAAGGC...AGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp GTATCACCTGAACTGCAGGCCACACATGCTCACGAGTGTGTCCCTGCCGTAGGTGCCTTCACCGTCAGCTaGATGGCGGTCGCGACGGCG +
Preference number: 4 (lower is better)
Translates to: VSPELQATHAHECVPAVGAFTVS*MAVATA
Trigger: CGCCGTCGCGACCGCCATGCAGCTGACGGTGAAGGC...ACCTACGGCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACTGCACTCGCGGCCCTaGAGCGCCTTCACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWALHSRP*SAFTVS
Trigger: GCTGACGGTGAAGGCGCTGCAGGGCCGCGAGTGCAG...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR GCA 90 bp TTGTCTCAGTCACTTCAGGGTGCAGGAAGCGGCTGGCCAACCGTTCGATGTCGTCTGCACTCGCGGCCCTaGAGCGCCTTCACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSQSLQGAGSGWPTVRCRLHSRP*SAFTVS
Trigger: GCTGACGGTGAAGGCGCTGCAGGGCCGCGAGTGCAG...ACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp AAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGACCCTGCTGGCATCTaGCGCACTGAAGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KALSEAAGFRLGLCHFIADPAGI*RTEVAG
Trigger: GCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTC...GGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCACCACTTCATCGCCGGTaGCTCTGCTGTGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: ENTLSATCSGSLALGTSPPLHRR*LCCAGS
Trigger: AGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGG...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACCTCTCGACACTTAGTGCGACATaGAGCGGTAGCCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RLANRSMSSSVRRLRDLSTLSAT*SGSLAL
Trigger: CAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT...CGAGAGGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp TTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATCACAGAGCTGGGGTaGCTTGCTGACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVRHAAVAWRWAPPHAPRITELG*LADSLA
Trigger: GGCCAGGGAGTCAGCAAGGCACCCCAGCTCTGTGAT...TCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCTCACCGTCAGCTGCATaGCGGTCGCGACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLTPRHFQKPLDSDWGCASPSAA*RSRRRP
Trigger: TGGACGCCGTCGCGACCGCCATGCAGCTGACGGTGA...GGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp GCGGCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGCCGCTGCTGGCGCACTaGGACGTTCAGCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: AAPSSFSHQGTFRSRWIPPLLAH*DVQLLG
Trigger: TCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGG...CGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR TCA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCAACCCAGGTCAAGCTGTaGGGAGTGCCTAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ENTLSATCSGSLALGTSPTQVKL*GVPSTW
Trigger: CCAGGTGCTAGGCACTCCTCACAGCTTGACCTGGGT...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR TCA 90 bp AACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCCCGGCTCTCCTCTTCTaGGGGTGTGGAAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: NTLSATCSGSLALGTSPCPALLF*GCGSKP
Trigger: GGGTTTGCTTCCACACCCTCAGAAGAGGAGAGCCGG...GCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACAGCACGCGCAGCCCTaGCCACACTGTGAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWAQHAQP*PHCEQL
Trigger: GAGCTGCTCACAGTGTGGTCAGGGCTGCGCGTGCTG...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGCTGGAGTTGGGCCCGATaGTATAATCCGAGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: AGQDFGDQLPDLRGWGVGWSWAR*YNPRVV
Trigger: AACGACTCTCGGATTATAGCATCGGGCCCAACTCCA...GCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp TCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACCATCGCCGGTGCCTCTaGTGTGCCGGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SHTKALSEAAGFRLGLCHHRRCL*CAGSPL
Trigger: AAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATG...GTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp TCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACCCACTTCATCGCCGGTaGCTCTGCTGTGCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHTKALSEAAGFRLGLCHPLHRR*LCCAGS
Trigger: AGAGCCGGCACAGCAGAGGCACCGGCGATGAAGTGG...GTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp GCTCACTTGGCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTGGCTTCCTACTGCAGGCCACACATaGTCACGAGTGTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AHLARVKGRSGVLLMWLPTAGHT*SRVCPC
Trigger: GCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGT...AGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATTCACCGTCAGCTGCATaGCGGTCGCGACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HQGTFRSRWIPTGAVPLHSPSAA*RSRRRP
Trigger: TGGACGCCGTCGCGACCGCCATGCAGCTGACGGTGA...ATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCAACAGCAGCCGCTGCTaGCGCACTGGGACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSHTKALSEAAGFRLGLCNSSRC*RTGTFS
Trigger: GCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTT...GCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCAGAGTCGGCCAGCCTCTaGGCCTCGCCTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: ENTLSATCSGSLALGTSPESASL*ASPSSS
Trigger: ACTAGAAGAAGGCGAGGCCCAGAGGCTGGCCGACTC...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR CCA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCAGGTGCAGGAAGCGGCTaGCCAACCGTTCGATGTCGT +
Preference number: 4 (lower is better)
Translates to: ENTLSATCSGSLALGTSPGAGSG*PTVRCR
Trigger: ACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACC...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR CCA 90 bp CGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTAGGTGCAGGAAGCGGCTaGCCAACCGTTCGATGTCGT +
Preference number: 4 (lower is better)
Translates to: RHAAVAWRWAPPHAPRILGAGSG*PTVRCR
Trigger: ACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACC...TAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp TTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAGGCGTCCTCCTGATGTaGCTTCCTTCCAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: LVRHAAVAWRWAPPHAPRGVLLM*LPSSLY
Trigger: GTAGAGGCTGGAAGGAAGCCACATCAGGAGGACGCC...TCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp CCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGGCATCTGCCGCACTaGAGTGGCGGGCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: PPSHTKALSEAAGFRLGLWHLPH*SGGPRL
Trigger: AAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCA...CAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR TCA 90 bp CCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGGCCCAGTCCCAGCTCTaGCACTGCCTTGCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: PPSHTKALSEAAGFRLGLAQSQL*HCLAES
Trigger: TGACTCAGCAAGGCAGTGTCAGAGCTGGGACTGGGC...CAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp AGTGGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACTGAGACTCGGAGTGGCGTCCTCCTaGTGTGGCTTCCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGPHCIESMAGDQVALRLGVASS*CGFLPA
Trigger: GGCTGGAAGGAAGCCACATCAGGAGGACGCCACTCC...GAGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTCTCGGAGACCAGCTaGTTCAGCGTGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: RHAAVAWRWAPPHAPRILFSETS*FSVDTS
Trigger: GCTGGTGTCCACGCTGAAGCAGCTGGTCTCCGAGAA...TAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp GCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCTTCTCCAGACCCTGCTGGCATCTaGCGCACTGAAGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALGTSPCSENSIWRSPSPDPAGI*RTEVAG
Trigger: GCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTC...TGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp CTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCTCAAGCTGTGAGGAGTaGCTAGCACCTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSGLNMTCESPALQAAPSSSCEE*LAPGQS
Trigger: GCTCTGGCCAGGTGCTAGGCACTCCTCACAGCTTGA...GGAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACATCGCCGGTGCCTCTaGTGTGCCGGCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWAHRRCL*CAGSPL
Trigger: AAGAGGAGAGCCGGCACAGCAGAGGCACCGGCGATG...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp ACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCTGTCACTTGGCCTCCTaGAGAGGTAAGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLSATCSGSLALGTSPCSCHLAS*RGKLRA
Trigger: AGCCCTCAGCTTACCTCTGCAGGAGGCCAAGTGACA...GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGCAGATACCGGAACCCAGTCCATaGTTCTGCCCCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALLSHPSALTLPGRDKQIPEPSP*FCPHPG
Trigger: GCCAGGGTGGGGGCAGAAGCATGGACTGGGTTCCGG...TATCTGCTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GTATCACCTGAACTGCAGGCCACACATGCTCACGAGTGTGTCCCTGCCGTAGGTCCGCTGCTGGCGCACTaGGACGTTCAGCTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: VSPELQATHAHECVPAVGPLLAH*DVQLLG
Trigger: TCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGG...ACCTACGGCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCAACAGCAGCCGCTGCTaGCGCACTGGGACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPNSSRC*RTGTFS
Trigger: GCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTT...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp TGTTCCAGGACCCTGCTGGCATCTGCCGCACTGAAGTGGCGGGCCAAGACTTTGTCTGCCGCACTGAAGTaGCGGGCCAAGACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CSRTLLASAALKWRAKTLSAALK*RAKTLE
Trigger: CTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGA...CAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCAGCAGGGTCCTGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CCA 90 bp TCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCCGCTGGATTCCGACTaGGGCTGTGCCACTTCATCG +
Preference number: 4 (lower is better)
Translates to: SQWAKHDMREPSSPSGPFPLDSD*GCATSS
Trigger: CGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGG...GAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGCCGCTGGATTCCGACTaGGGCTGTGCCACTTCATCG +
Preference number: 4 (lower is better)
Translates to: VREGFRGSCRQPSFHPRRPLDSD*GCATSS
Trigger: CGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGG...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGGCTGCAGCCATGCAGCGGTAGCCTaGCGTTGGGCACCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GPNLLFHLSNAHWHTGCSHAAVA*RWAPPH
Trigger: ATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATG...GCTGCAGCCAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGGTGAAGGGCCGGAGTaGCGTCCTCCTGATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSSFSHQGTFRSRWIPTGGEGPE*RPPDVA
Trigger: AGCCACATCAGGAGGACGCCACTCCGGCCCTTCACC...CCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GACTCCCTGGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGGCTCTCCAGCTCTCGTaGGGGGCCAGGGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: DSLAPICFSICRTHTGTLALQLS*GARGFC
Trigger: ACAGAAGCCCCTGGCCCCCCACGAGAGCTGGAGAGC...CAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCCAGGGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp CCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGTGGCATCTGCCGCACTaGAGTGGCGGGCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: PSSFSHQGTFRSRWIPTGWHLPH*SGGPRL
Trigger: AAGTCTTGGCCCGCCACTTCAGTGCGGCAGATGCCA...CCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR TCA 90 bp GCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTACCCAGGTCAAGCTGTaGGGAGTGCCTAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: APSSFSHQGTFRSRWIPTTQVKL*GVPSTW
Trigger: CCAGGTGCTAGGCACTCCTCACAGCTTGACCTGGGT...AGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCACTGCACTCGCGGCCCTaGAGCGCCTTCACCGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRVYSQWAKHDMREPSSPLHSRP*SAFTVS
Trigger: GCTGACGGTGAAGGCGCTGCAGGGCCGCGAGTGCAG...TGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTC +
Preference number: 4 (lower is better)
Translates to: PLPPSHTKALSEAAGFRLLNSSR*WRTGTF
Trigger: GAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAA...CAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTC +
Preference number: 4 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPLNSSR*WRTGTF
Trigger: GAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAA...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGACTTTGGAGATCAGCTaGCAGACCTGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLPPSHTKALSEAAGFRLTLEIS*QTCGGG
Trigger: CCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGT...CAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp TTGTCTCAGTCACTTCAGGGTGCAGGAAGCGGCTGGCCAACCGTTCGATGTCGTACTTTGGAGATCAGCTaGCAGACCTGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSQSLQGAGSGWPTVRCRTLEIS*QTCGGG
Trigger: CCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGT...ACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGTCAGTCACTTCAGGGTaGAGGAAGCGGCTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: VREGFRGSCRQPSFHPRRSVTSG*RKRLAN
Trigger: GTTGGCCAGCCGCTTCCTGCACCCTGAAGTGACTGA...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTCCAGCTGCTTCAGCGTaGACACCAGCTCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: APSSFSHQGTFRSRWIPTPAASA*TPARPL
Trigger: CAGAGGACGAGCTGGTGTCCACGCTGAAGCAGCTGG...AGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp GGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGGCTGCAGCCCAGCTGCTTCAGCGTaGACACCAGCTCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPNLLFHLSNAHWHTGCSPAASA*TPARPL
Trigger: CAGAGGACGAGCTGGTGTCCACGCTGAAGCAGCTGG...GCTGCAGCCAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp ATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTGAGTCGGCCAGCCTCTaGGCCTCGCCTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: ILSGLNMTCESPALQAAPESASL*ASPSSS
Trigger: ACTAGAAGAAGGCGAGGCCCAGAGGCTGGCCGACTC...AGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp AGTGGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACTGAGACTCGAGTCGGCCAGCCTCTaGGCCTCGCCTTCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: SGPHCIESMAGDQVALRLESASL*ASPSSS
Trigger: ACTAGAAGAAGGCGAGGCCCAGAGGCTGGCCGACTC...GAGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGGAGTGCCTAGCACCTaGCCAGAGCCAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: SSFSHQGTFRSRWIPTGAGVPST*PEPGTC
Trigger: GCATGTACCTGGCTCTGGCCAGGTGCTAGGCACTCC...AGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp CTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCACTTTCAGAAGCCGCTaGATTCCGACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSGLNMTCESPALQAAPSTFRSR*IPTGAV
Trigger: CACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGT...GGAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp CTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCTTGTCGAACGCACACTaGCACACTGGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLTPRHFQKPLDSDWGCALSNAH*HTGCSS
Trigger: GCTGCTGCAGCCAGTGTGCCAGTGTGCGTTCGACAA...GGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GGACAAAGGCCTACGCCCAGTCCCAGCTCTGACACTGCCTTGCTGAGTCACCCAGCCTTGCTGACTCCCTaGCCCCAATCTGCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GQRPTPSPSSDTALLSHPALLTP*PQSAFP
Trigger: TGGAAAAGCAGATTGGGGCCAGGGAGTCAGCAAGGC...TGGGTGACTCAGCAAGGCAGTGTCAGAGCTGGGACTGGGCGTAGGCCTTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GCTCACTTGGCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTGGCTTCCTGGAGGCAGAAGACACTaGGTGAAATTGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: AHLARVKGRSGVLLMWLPGGRRH*VKLLTC
Trigger: GCAGGTGAGCAATTTCACCCAGTGTCTTCTGCCTCC...AGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCAGAGGGAGGGATTCCGTaGAAGCTGCAGGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWAEGGIP*KLQAAI
Trigger: GATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTC...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTCAAGCTGTGAGGAGTaGCTAGCACCTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PNCNRRTHLVRHAAVAWRSSCEE*LAPGQS
Trigger: GCTCTGGCCAGGTGCTAGGCACTCCTCACAGCTTGA...ACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR GCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCATGGGGACCCAATATTTaGCCCACAAGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWAWGPNI*PTRPRQ
Trigger: CTGCCTGGGCCTTGTGGGGCAAATATTGGGTCCCCA...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGTCTGCCGCACTGAAGTaGCGGGCCAAGACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PSSFSHQGTFRSRWIPTGSAALK*RAKTLE
Trigger: CTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGA...CCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp CACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATTCTGCCGCACTGAAGTaGCGGGCCAAGACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HQGTFRSRWIPTGAVPLHSAALK*RAKTLE
Trigger: CTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGA...ATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GCGGCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGCCTCTTCTGAGGGTGTaGAAGCAAACCCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: AAPSSFSHQGTFRSRWIPPLLRV*KQTQVK
Trigger: CTTGACCTGGGTTTGCTTCCACACCCTCAGAAGAGG...CGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp GCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGTCACATCACAGAGCTaGGGTGCCTTGCTGACTCCC +
Preference number: 4 (lower is better)
Translates to: APSSFSHQGTFRSRWIPTVTSQS*GALLTP
Trigger: GGGAGTCAGCAAGGCACCCCAGCTCTGTGATGTGAC...AGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GGGCCAGGGGCTTCTGTGTGCTCTTCAAAGCCTTCACCCATTGGGCCTCTGTCCAGCCCTAACGCTTCCTaGACGAGACAAGCAGATAGG +
Preference number: 4 (lower is better)
Translates to: GPGASVCSSKPSPIGPLSSPNAS*TRQADR
Trigger: CCTATCTGCTTGTCTCGTCCAGGAAGCGTTAGGGCT...GGACAGAGGCCCAATGGGTGAAGGCTTTGAAGAGCACACAGAAGCCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp AGTGGCCCTCACTGTATAGAGTCCATGGCTGGGGACCAAGTGGCACTGAGACTCACACACACGGCAGGGTaGAGGAGGATGAACCGGAAC +
Preference number: 4 (lower is better)
Translates to: SGPHCIESMAGDQVALRLTHTAG*RRMNRN
Trigger: GTTCCGGTTCATCCTCCTCCACCCTGCCGTGTGTGT...GAGTCTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATACAGTGAGGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTCGGAGGTGGTGGCCTaGGATGTAGCAGATACCAAC +
Preference number: 4 (lower is better)
Translates to: SHTKALSEAAGFRLGLCHSEVVA*DVADTN
Trigger: GTTGGTATCTGCTACATCCCAGGCCACCACCTCCGA...GTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp ATCTGCCGCACTGAAGTGGCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCCAAAGACAGATCGATaGGTTCCTCCTCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: ICRTEVAGQDFGDQLPDLPKTDR*VPPPPP
Trigger: CGGTGGAGGAGGAGGAACCCATCGATCTGTCTTTGG...CAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCACTTCAGTGCGGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR TCA 90 bp GGGAGTCACCTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCCCGGCTCTCCTCTTCTaGGGGTGTGGAAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: GSHLRVYSQWAKHDMREPPALLF*GCGSKP
Trigger: GGGTTTGCTTCCACACCCTCAGAAGAGGAGAGCCGG...GGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR TCA 90 bp GGGAGTCACCTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCCCTGCAGAGGTAAGCTaGGGGCTATGTTGGACCCGC +
Preference number: 4 (lower is better)
Translates to: GSHLRVYSQWAKHDMREPPAEVS*GLCWTR
Trigger: GCGGGTCCAACATAGCCCTCAGCTTACCTCTGCAGG...GGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCGAGTCGTTTCCCATCTaGCAGGGCCTTGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPESFPI*QGLALE
Trigger: TTCAAGGGCAAGGCCCTGGCAGATGGGAAACGACTC...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp GGGAGTCACCTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCACTTTGGAGATCAGCTaGCAGACCTGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSHLRVYSQWAKHDMREPTLEIS*QTCGGG
Trigger: CCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGT...GGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCATTCCGACTGGGGCTGTaGCACTTCATCGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRVYSQWAKHDMREPSSPFRLGL*HFIAGA
Trigger: GGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAA...TGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp TCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCGGGCTAAACATGACATaGGAGAGCCCAGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SQWAKHDMREPSSPSGPFGLNMT*ESPALQ
Trigger: TTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCC...GAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp CCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACCTCTCGTAATCCCTCTGTTGGGCACCTCCCCATaGTCCGAGAATTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: PFDVVQRQATQGPLVIPLLGTSP*SENSIW
Trigger: CCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAA...CAGAGGGATTACGAGAGGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp ATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTACACTTAGTGCGACATaGAGCGGTAGCCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: ILSGLNMTCESPALQAAPTLSAT*SGSLAL
Trigger: CAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT...AGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCCCAGGGGCTTCTGTGTaGTCTTCAAAGCCTTCACCC +
Preference number: 4 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPPGASV*SSKPSP
Trigger: GGGTGAAGGCTTTGAAGAGCACACAGAAGCCCCTGG...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TATGATGATGATGAGCCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCACCAGACCTGCGGGGGTaGGGAGTCGGCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YDDDEPNCNRRTHLVRHAPDLRG*GVGQPL
Trigger: CAGAGGCTGGCCGACTCCCCACCCCCGCAGGTCTGG...TGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATCATCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR CCA 90 bp ATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTACTTTCAGAAGCCGCTaGATTCCGACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILSGLNMTCESPALQAAPTFRSR*IPTGAV
Trigger: CACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGT...AGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR TCA 90 bp GCTGCTTTCCCTTTCAGGATCGGGAGGGAGTCACCTGAGGGTATATTCTCAGTGGGGACCAAGTGGCACTaGGACTCGCCCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: AAFPFRIGRESPEGIFSVGTKWH*DSPKVT
Trigger: TGTGACTTTGGGCGAGTCTCAGTGCCACTTGGTCCC...CACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCCTGAAAGGGAAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp AAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTAAATGTATCACCTaGACTGCAGGCCACACATGC +
Preference number: 4 (lower is better)
Translates to: KALSEAAGFRLGLCHFIAGKCIT*TAGHTC
Trigger: GCATGTGTGGCCTGCAGTTCAGGTGATACATTTACC...GGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GGGAGTCACCTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCTTCTCGGAGACCAGCTaGTTCAGCGTGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: GSHLRVYSQWAKHDMREPFSETS*FSVDTS
Trigger: GCTGGTGTCCACGCTGAAGCAGCTGGTCTCCGAGAA...GGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp GCTGCTTTCCCTTTCAGGATCGGGAGGGAGTCACCTGAGGGTATATTCTCAGTGTTCTCGGAGACCAGCTaGTTCAGCGTGGACACCAGC +
Preference number: 4 (lower is better)
Translates to: AAFPFRIGRESPEGIFSVFSETS*FSVDTS
Trigger: GCTGGTGTCCACGCTGAAGCAGCTGGTCTCCGAGAA...CACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCCTGAAAGGGAAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTGGAGTTGGGCCCGATaGTATAATCCGAGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: SHTKALSEAAGFRLGLCHWSWAR*YNPRVV
Trigger: AACGACTCTCGGATTATAGCATCGGGCCCAACTCCA...GTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR GCA 90 bp TCGGAGGTGGTGGCCTGGGATGTAGCAGATACCAACGCAGAGGGAGGCAGAAGAAAGTCAGGTGACAGCTaGTTTCCCTTTCAGGATCGG +
Preference number: 4 (lower is better)
Translates to: SEVVAWDVADTNAEGGRRKSGDS*FPFQDR
Trigger: CCGATCCTGAAAGGGAAAGCAGCTGTCACCTGACTT...TCTTCTGCCTCCCTCTGCGTTGGTATCTGCTACATCCCAGGCCACCACCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCAGGTACACAGAGAAGATaGTGCTCTGGCAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWAGTQRR*CSGSEG
Trigger: TCCCTCACTGCCAGAGCAGCATCTTCTCTGTGTACC...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp ACACAGGTGGCTGGGATATGTTCATCTTCCACAGGGAGGCCAGTGCTGGGGATGTATAGAGTCCATGGCTaGGGACCAAGTGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: TQVAGICSSSTGRPVLGMYRVHG*GPSGTE
Trigger: CTCAGTGCCACTTGGTCCCCAGCCATGGACTCTATA...CATCCCCAGCACTGGCCTCCCTGTGGAAGATGAACATATCCCAGCCACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCAAGGAGCAGGTaGTTAGATGTCCTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CNRRTHLVRHAAVAWRWAPPRSR*LDVLLC
Trigger: GCACAAGAGGACATCTAACCACCTGCTCCTTGGAGG...TGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GTATCACCTGAACTGCAGGCCACACATGCTCACGAGTGTGTCCCTGCCGTAGGTTCCATCTTTCCAGCCTaGGGACCCAATATTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VSPELQATHAHECVPAVGSIFPA*GPNICP
Trigger: GGGGCAAATATTGGGTCCCCAGGCTGGAAAGATGGA...ACCTACGGCAGGGACACACTCGTGAGCATGTGTGGCCTGCAGTTCAGGTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TCGGAGGTGGTGGCCTGGGATGTAGCAGATACCAACGCAGAGGGAGGCAGAAGACTGAGACAGCAGAGGTaGTACACAGAGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SEVVAWDVADTNAEGGRRLRQQR*YTEKML
Trigger: CAGCATCTTCTCTGTGTACCACCTCTGCTGTCTCAG...TCTTCTGCCTCCCTCTGCGTTGGTATCTGCTACATCCCAGGCCACCACCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CAA 72 bp AACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTaGGGCACCTCCCCATGCTCCGAGAATTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: NTLSATCSGSLA*GTSPCSENSIW
Trigger: CCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR TCA 90 bp CACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACGCCCTGACCACACTGTaGGCAGCTCACTTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: HWVKLLTCCQCQYHWTFHALTTL*AAHLAR
Trigger: CCTTGCCAAGTGAGCTGCTCACAGTGTGGTCAGGGC...GTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp GCCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTTGCCGTAGGTGGCTTTaGAGCCATATACATGGCTCT +
Preference number: 4 (lower is better)
Translates to: APSSFSHQGTFRSRWIPTCRRWL*SHIHGS
Trigger: AGAGCCATGTATATGGCTTCAAAGCCACCTACGGCA...AGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GTTGGGCACCTCCCCATGCTCCGAGAATTCTATTTGGAGAAGCCCTTCTCCATTTCAAGCTGTGAGGAGTaGCTAGCACCTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGHLPMLREFYLEKPFSISSCEE*LAPGQS
Trigger: GCTCTGGCCAGGTGCTAGGCACTCCTCACAGCTTGA...AATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp GACTCCCTGGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGGGGCTAAACATGACATaGGAGAGCCCAGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DSLAPICFSICRTHTGTLGLNMT*ESPALQ
Trigger: TTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCC...CAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCCAGGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GACACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGTTGGGCACCTCCCCATaGTCCGAGAATTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: DTALLSHPSALTLPGRDKLGTSP*SENSIW
Trigger: CCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAA...CTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp AACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCGATGATGAGCCCAACTaGAACAGGAGAACACACTTA +
Preference number: 4 (lower is better)
Translates to: NTLSATCSGSLALGTSPCDDEPN*NRRTHL
Trigger: TAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATC...GCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR GCA 90 bp ATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCCTGGCCCCAATCTaGTTTTCCATTTGTCGAACG +
Preference number: 4 (lower is better)
Translates to: ILSGLNMTCESPALQAAPSLAPI*FSICRT
Trigger: CGTTCGACAAATGGAAAAGCAGATTGGGGCCAGGGA...AGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGATTCCGTGGAAGCTaGAGGCAGCCATCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PLPPSHTKALSEAAGFRLGFRGS*RQPSFH
Trigger: ATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCC...CAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp ATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCTCTGGGTCACACTTaGCCACGGCTTCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: ILSGLNMTCESPALQAAPSLGHT*PRLHFW
Trigger: CCAAAAATGAAGCCGTGGCCAAGTGTGACCCAGAGA...AGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp CCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTGCCCCTGTACACAGGTaGCTGGGATATGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: PNCNRRTHLVRHAAVAWRAPVHR*LGYVHL
Trigger: AAGATGAACATATCCCAGCCACCTGTGTACAGGGGC...ACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GACACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGTTGAAGCCATATACATaGCTCTCCAGCTCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: DTALLSHPSALTLPGRDKLKPYT*LSSSRG
Trigger: CCCACGAGAGCTGGAGAGCCATGTATATGGCTTCAA...CTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp CACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACCGGGAGGGAGTCACCTaGGGGTATATTCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HWVKLLTCCQCQYHWTFHREGVT*GYILSG
Trigger: CCCACTGAGAATATACCCTCAGGTGACTCCCTCCCG...GTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GACTCCCTGGCCCCAATCTGCTTTTCCATTTGTCGAACGCACACTGGCACACTGTGGAGTTGGGCCCGATaGTATAATCCGAGAGTCGTT +
Preference number: 4 (lower is better)
Translates to: DSLAPICFSICRTHTGTLWSWAR*YNPRVV
Trigger: AACGACTCTCGGATTATAGCATCGGGCCCAACTCCA...CAGTGTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATTGGGGCCAGGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TCTCAGGCAACAAGGAGCACACAAAGTGAGCCCCTGTACACAGGTGGCTGGGATATGTATCACCTGAACTaGAGGCCACACATGCTCACG +
Preference number: 4 (lower is better)
Translates to: SQATRSTQSEPLYTGGWDMYHLN*RPHMLT
Trigger: CGTGAGCATGTGTGGCCTGCAGTTCAGGTGATACAT...ATCCCAGCCACCTGTGTACAGGGGCTCACTTTGTGTGCTCCTTGTTGCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCAAATTGCTCACCTGCTaGCAATGCCAATACCACTGG +
Preference number: 4 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPKLLTC*QCQYHW
Trigger: CCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTT...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GACACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGGTGAAATTGCTCACCTaGTGCCAATGCCAATACCAC +
Preference number: 4 (lower is better)
Translates to: DTALLSHPSALTLPGRDKVKLLT*CQCQYH
Trigger: GTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCAC...CTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATCCGAGAATTCTATTTaGAGAAGCCCTTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: ENTLSATCSGSLALGTSPSENSI*RSPSPL
Trigger: CAATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGA...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR CCA 90 bp TATGATGATGATGAGCCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCACATGCAGCGGTAGCCTaGCGTTGGGCACCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: YDDDEPNCNRRTHLVRHAHAAVA*RWAPPH
Trigger: ATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATG...TGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATCATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
3UTR CAA 72 bp GGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTATTaGGAGAAGCCCTTCTCCATTGTCTCAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: GVGHLPMLREFY*EKPFSIVSVTS
Trigger: TGAAGTGACTGAGACAATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR GCA 90 bp AGAGCCAGGTACATGCCAGCTATGATGATGATGAGCCCAACTGCAACAGGAGAAGAGTCGTTTCCCATCTaGCAGGGCCTTGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RARYMPAMMMMSPTATGEESFPI*QGLALE
Trigger: TTCAAGGGCAAGGCCCTGGCAGATGGGAAACGACTC...TTCTCCTGTTGCAGTTGGGCTCATCATCATCATAGCTGGCATGTACCTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCATTAGATGTCCTCTTGTaGCCACACACACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRVYSQWAKHDMREPSSPLDVLL*PHTRQG
Trigger: ACCCTGCCGTGTGTGTGGGCACAAGAGGACATCTAA...TGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACTTTCAGGAGTGCCTAGCACCTaGCCAGAGCCAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: GEIAHLLPMPIPLDFSLSGVPST*PEPGTC
Trigger: GCATGTACCTGGCTCTGGCCAGGTGCTAGGCACTCC...TGAAAGTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCAGGGTATATTCTCAGTaGGCTAAACATGACATGCGA +
Preference number: 4 (lower is better)
Translates to: SQWAKHDMREPSSPSGPFRVYSQ*AKHDMR
Trigger: TCGCATGTCATGTTTAGCCCACTGAGAATATACCCT...GAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CCA 90 bp CCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTCCGAGAATTCTATTTaGAGAAGCCCTTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PPSHTKALSEAAGFRLGLSENSI*RSPSPL
Trigger: CAATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGA...CAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACTTTCAGGGCTGGCTGTCACTTaGCCTCCTGCAGAGGTAAGC +
Preference number: 4 (lower is better)
Translates to: GEIAHLLPMPIPLDFSLSGLAVT*PPAEVS
Trigger: GCTTACCTCTGCAGGAGGCCAAGTGACAGCCAGCCC...TGAAAGTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp ACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCCAATGCCAATACCACTaGACTTTTCACTTTCATAAG +
Preference number: 4 (lower is better)
Translates to: TLSATCSGSLALGTSPCSQCQYH*TFHFHK
Trigger: CTTATGAAAGTGAAAAGTCCAGTGGTATTGGCATTG...GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GACACTGCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGAGGGTATATTCTCAGTaGGCTAAACATGACATGCGA +
Preference number: 4 (lower is better)
Translates to: DTALLSHPSALTLPGRDKRVYSQ*AKHDMR
Trigger: TCGCATGTCATGTTTAGCCCACTGAGAATATACCCT...CTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGCAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp AGAAGACACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTACTCAGGTCGGTGAGTaGCCCTCACTGTATAGAGTC +
Preference number: 4 (lower is better)
Translates to: RRHWVKLLTCCQCQYHWTTQVGE*PSLYRV
Trigger: GACTCTATACAGTGAGGGCCACTCACCGACCTGAGT...AGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CAA 72 bp GTCACACTTGGCCACGGCTTCATTTTTGGCTTCAGTTaGTTTACTGAACAGAAGGGAGAGGGGCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VTLGHGFIFGFS*FTEQKGEGPCE
Trigger: CTCACAGGGCCCCTCTCCCTTCTGTTCAGTAAACAAACTGAAGCCAAAAATGAAGCCGTGGCCAAGTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR TCA 90 bp CACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACCTTCAGTTTGTTTACTaGACAGAAGGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: HWVKLLTCCQCQYHWTFHLQFVY*TEGRGA
Trigger: GGCCCCTCTCCCTTCTGTTCAGTAAACAAACTGAAG...GTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp GCTGCTTTCCCTTTCAGGATCGGGAGGGAGTCACCTGAGGGTATATTCTCAGTGAGAAGAGTGTTTATTTaGTGGGGGCATCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: AAFPFRIGRESPEGIFSVRRVFI*WGHLRQ
Trigger: CTGTCTCAGATGCCCCCAGCAAATAAACACTCTTCT...CACTGAGAATATACCCTCAGGTGACTCCCTCCCGATCCTGAAAGGGAAAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369660.9
3UTR CAA 72 bp CCCATCTCTGGGTCACACTTGGCCACGGCTTCATTTTaGGCTTCAGTTTGTTTACTGAACAGAAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PISGSHLATASF*ASVCLLNRRER
Trigger: CCTCTCCCTTCTGTTCAGTAAACAAACTGAAGCCAAAAATGAAGCCGTGGCCAAGTGTGACCCAGAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TATGATGATGATGAGCCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCACCTCTTCTGAGGGTGTaGAAGCAAACCCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: YDDDEPNCNRRTHLVRHAPLLRV*KQTQVK
Trigger: CTTGACCTGGGTTTGCTTCCACACCCTCAGAAGAGG...TGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp AGAAGACACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTCTGTACACAGGTGGCTaGGATATGTTCATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRHWVKLLTCCQCQYHWTLYTGG*DMFIFH
Trigger: GTGGAAGATGAACATATCCCAGCCACCTGTGTACAG...AGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp GCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGCAGATACCAAAATCAATTTCCTaGCACCACACAAACAAGAAC +
Preference number: 4 (lower is better)
Translates to: ALLSHPSALTLPGRDKQIPKSIS*HHTNKN
Trigger: GTTCTTGTTTGTGTGGTGCCAGGAAATTGATTTTGG...TATCTGCTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR GCA 90 bp CACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTTTTCACGATGATGAGCCCAACTaGAACAGGAGAACACACTTA +
Preference number: 4 (lower is better)
Translates to: HWVKLLTCCQCQYHWTFHDDEPN*NRRTHL
Trigger: TAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATC...GTGAAAAGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CCA 90 bp TATGATGATGATGAGCCCAACTGCAACAGGAGAACACACTTAGTGCGACATGCAAGAGTGTTTATTTGCTaGGGGCATCTGAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: YDDDEPNCNRRTHLVRHARVFIC*GHLRQQ
Trigger: CTGCTGTCTCAGATGCCCCCAGCAAATAAACACTCT...TGCATGTCGCACTAAGTGTGTTCTCCTGTTGCAGTTGGGCTCATCATCATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS GCA 90 bp CTCGGGCGGCGGGAGCGGAGCGCTGCGGCATCCGGCTGTGAGGCATaGGGCCGCCTCCCTTGGGGTCATGTGGCGCTTGGCGCCCGCACC +
Preference number: 5 (lower is better)
Translates to: LGRRERSAAASGCEA*GRLPWGHVALGART
Trigger: GGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCGCAGCGCTCCGCTCCCGCCGCCCGAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS CCA 90 bp CGGCATCCGGCTGTGAGGCATGCGGCCGCCTCCCTTGGGGTCATGTaGCGCTTGGCGCCCGCACCCCGACCCGACACACGGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RHPAVRHAAASLGVM*RLAPAPRPDTRLLA
Trigger: GGCCAGCAGCCGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS CCA 90 bp CGGAGCGCTGCGGCATCCGGCTGTGAGGCATGCGGCCGCCTCCCTTaGGGTCATGTGGCGCTTGGCGCCCGCACCCCGACCCGACACACG +
Preference number: 5 (lower is better)
Translates to: RSAAASGCEACGRLP*GHVALGARTPTRHT
Trigger: CGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCGCAGCGCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS-3UTR CAA 90 bp GCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGCGCCAGGGCCTTGCCCTaGAACAGCAGCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: AGQDFGDQLPDLRGWGVGARALP*NSSRCW
Trigger: CCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGC...GCCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS GCA 90 bp CTGCGGCATCCGGCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTCAGCTTCTCGGAGACCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LRHPAARALPLNSSR*WRTGTFSFSETSCF
Trigger: GAAGCAGCTGGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGCCGGATGCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CAA 90 bp CGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAATTCTACCGGCTGCCAGGGCCTaGCCCTTGAACAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RHAAVAWRWAPPHAPRILPAARA*PLNSSR
Trigger: GCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGCCGG...TAGAATTCTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CAA 90 bp CTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCGCCAGGGCCTTGCCCTaGAACAGCAGCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LSGLNMTCESPALQAAPSARALP*NSSRCW
Trigger: CCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGC...GGAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp CAGGGTGCAGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTGGCGGGCCAAGACTTaGGAGATCAGCTGCCAGACC +
Preference number: 5 (lower is better)
Translates to: QGAGSGWPTVRCRPASGDWRAKT*EISCQT
Trigger: GGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCA...GTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCTGCACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CAA 90 bp TCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACGCCAGGGCCTTGCCCTaGAACAGCAGCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SHTKALSEAAGFRLGLCHARALP*NSSRCW
Trigger: CCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGC...GTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS GCA 90 bp AGTCGTTTCCCATCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTCAGCTTCTCGGAGACCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SRFPSARALPLNSSR*WRTGTFSFSETSCF
Trigger: GAAGCAGCTGGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGATGGGAAACGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp GGCGGGCCAAGACTTTGGAGATCAGCTGCCAGACCTGCGGGGGTGGGGAGTCGGACCTTCTCCAGGGGTTaGACCACTAGGTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: GGPRLWRSAARPAGVGSRTFSRG*TTRLSL
Trigger: CAAGCTCAACCTAGTGGTCAAACCCCTGGAGAAGGT...CCGACTCCCCACCCCCGCAGGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CAA 90 bp CCCCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGAGCGGTAGCCTGGCGTaGGGCACCTCCCCATGCTCC +
Preference number: 5 (lower is better)
Translates to: PLPPSHTKALSEAAGFRLSGSLA*GTSPCS
Trigger: GGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCT...CAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp GAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTGCCTCTGCTAAGCTGAGGGCTATGTaGGACCCGCCAGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: EAAGFRLGLCHFIAGASAKLRAM*DPPEVR
Trigger: CCTGACTTCTGGCGGGTCCAACATAGCCCTCAGCTT...AGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCCCATCTGCCAGGGCCTaGCCCTTGAACAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPPSARA*PLNSSR
Trigger: GCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGATGG...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp AGGAAGCGGCTGGCCAACCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACACCACTAGGTTGAGCTaGGAGTTGGGCCCGATGCTA +
Preference number: 5 (lower is better)
Translates to: RKRLANRSMSSSVRRLRDTTRLS*ELGPML
Trigger: TAGCATCGGGCCCAACTCCAAGCTCAACCTAGTGGT...GTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGGTTGGCCAGCCGCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CAA 90 bp CCGTTCGATGTCGTCCAGCGTCAGGCGACTCAGGGACCTCTCGTAATCCCTCTGGGTTTGACCACTAGGTaGAGCTTGGAGTTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: PFDVVQRQATQGPLVIPLGLTTR*SLELGP
Trigger: CGGGCCCAACTCCAAGCTCAACCTAGTGGTCAAACC...CAGAGGGATTACGAGAGGTCCCTGAGTCGCCTGACGCTGGACGACATCGAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS-3UTR CAA 90 bp GAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATCGCCGGTGCCTCTGCTACCTTCTCCAGGGGTTaGACCACTAGGTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EAAGFRLGLCHFIAGASATFSRG*TTRLSL
Trigger: CAAGCTCAACCTAGTGGTCAAACCCCTGGAGAAGGT...AGCAGAGGCACCGGCGATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGCTGGGGACCCAATATTaGCCCCACAAGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: VREGFRGSCRQPSFHPRRLGTQY*PHKAQA
Trigger: TGCCTGGGCCTTGTGGGGCAAATATTGGGTCCCCAG...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp CTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCATGCTCCGAGAGACACTGGGTGAAATaGCTCACCTGCTGCCAATGC +
Preference number: 5 (lower is better)
Translates to: LSATCSGSLALGTSPCSERHWVK*LTCCQC
Trigger: GCATTGGCAGCAGGTGAGCAATTTCACCCAGTGTCT...CTCGGAGCATGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp GGGAGTCACCTGAGGGTATATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCCCATCTGCCAGGGCCTaGCCCTTGAACAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GSHLRVYSQWAKHDMREPPSARA*PLNSSR
Trigger: GCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGATGG...GGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATATACCCTCAGGTGACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGGGTTTGACCACTAGGTaGAGCTTGGAGTTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: VREGFRGSCRQPSFHPRRGLTTR*SLELGP
Trigger: CGGGCCCAACTCCAAGCTCAACCTAGTGGTCAAACC...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp TATTCTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTGGCGGGCCAAGACTTaGGAGATCAGCTGCCAGACC +
Preference number: 5 (lower is better)
Translates to: YSQWAKHDMREPSSPSGPWRAKT*EISCQT
Trigger: GGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCA...GGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp TCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTTGGCGGGCCAAGACTTaGGAGATCAGCTGCCAGACC +
Preference number: 5 (lower is better)
Translates to: SSFSHQGTFRSRWIPTGAWRAKT*EISCQT
Trigger: GGTCTGGCAGCTGATCTCCAAAGTCTTGGCCCGCCA...AGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp CTCAGTGGGCTAAACATGACATGCGAGAGCCCAGCTCTCCAAGCGGCCCCTTCCTGGTTAGATGTCCTCTaGTGCCCACACACACGGCAG +
Preference number: 5 (lower is better)
Translates to: LSGLNMTCESPALQAAPSWLDVL*CPHTRQ
Trigger: CTGCCGTGTGTGTGGGCACAAGAGGACATCTAACCA...GGAAGGGGCCGCTTGGAGAGCTGGGCTCTCGCATGTCATGTTTAGCCCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp GCTCACTTGGCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTGGCTTCCTCAAAGCCTTCACCCATaGGGCCTCTGTCCATCTTTC +
Preference number: 5 (lower is better)
Translates to: AHLARVKGRSGVLLMWLPQSLHP*GLCPSF
Trigger: GAAAGATGGACAGAGGCCCAATGGGTGAAGGCTTTG...AGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp CCTTCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGGTTTGACCACTAGGTaGAGCTTGGAGTTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: PSSFSHQGTFRSRWIPTGGLTTR*SLELGP
Trigger: CGGGCCCAACTCCAAGCTCAACCTAGTGGTCAAACC...CCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp TCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTACCACTAGGTTGAGCTaGGAGTTGGGCCCGATGCTA +
Preference number: 5 (lower is better)
Translates to: SSFSHQGTFRSRWIPTGATTRLS*ELGPML
Trigger: TAGCATCGGGCCCAACTCCAAGCTCAACCTAGTGGT...AGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp GCCTTGCTGAGTCACCCATCAGCCCTAACGCTTCCTGGACGAGACAAGCAGATAACCACTAGGTTGAGCTaGGAGTTGGGCCCGATGCTA +
Preference number: 5 (lower is better)
Translates to: ALLSHPSALTLPGRDKQITTRLS*ELGPML
Trigger: TAGCATCGGGCCCAACTCCAAGCTCAACCTAGTGGT...TATCTGCTTGTCTCGTCCAGGAAGCGTTAGGGCTGATGGGTGACTCAGCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp TCCTCCTTCTCACACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTACCTTCTCCAGGGGTTaGACCACTAGGTTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SSFSHQGTFRSRWIPTGATFSRG*TTRLSL
Trigger: CAAGCTCAACCTAGTGGTCAAACCCCTGGAGAAGGT...AGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTGTGAGAAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS-3UTR CAA 90 bp GCTCACTTGGCAAGGGTGAAGGGCCGGAGTGGCGTCCTCCTGATGTGGCTTCCTGCCACGGCTTCATTTTaGGCTTCAGTTTGTTTACTG +
Preference number: 5 (lower is better)
Translates to: AHLARVKGRSGVLLMWLPATASF*ASVCLL
Trigger: CAGTAAACAAACTGAAGCCAAAAATGAAGCCGTGGC...AGGAAGCCACATCAGGAGGACGCCACTCCGGCCCTTCACCCTTGCCAAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp GAGAACACACTTAGTGCGACATGCAGCGGTAGCCTGGCGTTGGGCACCTCCCCACTCCGAGAATTCTATTaGGAGAAGCCCTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: ENTLSATCSGSLALGTSPLREFY*EKPFSI
Trigger: AATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAG...TGGGGAGGTGCCCAACGCCAGGCTACCGCTGCATGTCGCACTAAGTGTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369660.9
ENST00000417913.1
CDS-3UTR CAA 90 bp CACCAAGGCACTTTCAGAAGCCGCTGGATTCCGACTGGGGCTGTGCCACTTCATATCTCTGGGTCACACTaGGCCACGGCTTCATTTTTG +
Preference number: 5 (lower is better)
Translates to: HQGTFRSRWIPTGAVPLHISGSH*ATASFL
Trigger: CAAAAATGAAGCCGTGGCCAAGTGTGACCCAGAGAT...ATGAAGTGGCACAGCCCCAGTCGGAATCCAGCGGCTTCTGAAAGTGCCTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp GTGAGGGAGGGATTCCGTGGAAGCTGCAGGCAGCCATCTTTTCATCCTCGGAGGGAGAAGAGTGTTTATTaGCTGGGGGCATCTGAGACA +
Preference number: 5 (lower is better)
Translates to: VREGFRGSCRQPSFHPRREKSVY*LGASET
Trigger: TGTCTCAGATGCCCCCAGCAAATAAACACTCTTCTC...CCTCCGAGGATGAAAAGATGGCTGCCTGCAGCTTCCACGGAATCCCTCCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp TCTCAGGCAACAAGGAGCACACAAAGTGAGCCCCTGTACACAGGTGGCTGGGATCTCCGAGAATTCTATTaGGAGAAGCCCTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: SQATRSTQSEPLYTGGWDLREFY*EKPFSI
Trigger: AATGGAGAAGGGCTTCTCCAAATAGAATTCTCGGAG...ATCCCAGCCACCTGTGTACAGGGGCTCACTTTGTGTGCTCCTTGTTGCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp AGAAGACACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTAATCTGCTTTTCCATTaGTCGAACGCACACTGGCAC +
Preference number: 5 (lower is better)
Translates to: RRHWVKLLTCCQCQYHWTNLLFH*SNAHWH
Trigger: GTGCCAGTGTGCGTTCGACAAATGGAAAAGCAGATT...AGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS-3UTR CAA 90 bp AGAAGACACTGGGTGAAATTGCTCACCTGCTGCCAATGCCAATACCACTGGACTATTTTTGGCTTCAGTTaGTTTACTGAACAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: RRHWVKLLTCCQCQYHWTIFGFS*FTEQKG
Trigger: TCCCTTCTGTTCAGTAAACAAACTGAAGCCAAAAAT...AGTCCAGTGGTATTGGCATTGGCAGCAGGTGAGCAATTTCACCCAGTGTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369660.9
CDS CCA 72 bp GATCGATGGGTTCCTCCTCCTCCACCGCCGTGGGGGTaGCCCGGGGCGCGAGGCCGCCTCGGGCGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: DRWVPPPPPPWG*PGARGRLGRRE
Trigger: CTCCCGCCGCCCGAGGCGGCCTCGCGCCCCGGGCCACCCCCACGGCGGTGGAGGAGGAGGAACCCATCGATC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417913.1
ENST00000477777.1
CDS CAA 90 bp CCGGCTGTGAGGCATGCGGCCGCCTCCCTTGGGGTCATGTGGCGCTaGGCGCCCGCACCCCGACCCGACACACGGCTGCTGGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: PAVRHAAASLGVMWR*APAPRPDTRLLASA
Trigger: GGCCGAGGCCAGCAGCCGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS CCA 72 bp GGCATGCGGCCGCCTCCCTTGGGGTCATGTGGCGCTTaGCGCCCGCACCCCGACCCGACACACGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GMRPPPLGSCGA*RPHPDPTHGCW
Trigger: CCAGCAGCCGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS CCA 72 bp GCGGCATCCGGCTGTGAGGCATGCGGCCGCCTCCCTTaGGGTCATGTGGCGCTTGGCGCCCGCACCCCGACC +
Preference number: 6 (lower is better)
Translates to: AASGCEACGRLP*GHVALGARTPT
Trigger: GGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS GCA 72 bp CGGGAGCGGAGCGCTGCGGCATCCGGCTGTGAGGCATaGGGCCGCCTCCCTTGGGGTCATGTGGCGCTTGGC +
Preference number: 6 (lower is better)
Translates to: RERSAAASGCEA*GRLPWGHVALG
Trigger: GCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCTCACAGCCGGATGCCGCAGCGCTCCGCTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS CAA 72 bp AGGCATGCGGCCGCCTCCCTTGGGGTCATGTGGCGCTaGGCGCCCGCACCCCGACCCGACACACGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RHAAASLGVMWR*APAPRPDTRLL
Trigger: CAGCAGCCGTGTGTCGGGTCGGGGTGCGGGCGCCAAGCGCCACATGACCCCAAGGGAGGCGGCCGCATGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS TCA 72 bp GAGCGCTGCGGCATCCGGCTGCCAGGGCCTTGCCCTTaGACAGCAGCCGCTGCTGGCGCACTGGGACGTTCA +
Preference number: 6 (lower is better)
Translates to: ERCGIRLPGPCP*TAAAAGALGRS
Trigger: TGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGCCGGATGCCGCAGCGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS GCA 72 bp CCGGCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTCAGCTTCTCGGAGACC +
Preference number: 6 (lower is better)
Translates to: PAARALPLNSSR*WRTGTFSFSET
Trigger: GGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS CCA 72 bp GCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTGCTaGCGCACTGGGACGTTCAGCTTCTCGGAGACCAGC +
Preference number: 6 (lower is better)
Translates to: AARALPLNSSRC*RTGTFSFSETS
Trigger: GCTGGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417913.1
CDS CCA 72 bp CCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTGCTaGCGCACTGGGACGTTCAGCTTCTCGGAGACCAGC +
Preference number: 6 (lower is better)
Translates to: PARALPLNSSRC*RTGTFSFSETS
Trigger: GCTGGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS GCA 72 bp CCATCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTCAGCTTCTCGGAGACC +
Preference number: 6 (lower is better)
Translates to: PSARALPLNSSR*WRTGTFSFSET
Trigger: GGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS GCA 72 bp GTACCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTaGTGGCGCACTGGGACGTTCAGCTTCTCGGAGACC +
Preference number: 6 (lower is better)
Translates to: VPARALPLNSSR*WRTGTFSFSET
Trigger: GGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGGTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481237.1
CDS CCA 72 bp TCTGCCAGGGCCTTGCCCTTGAACAGCAGCCGCTGCTaGCGCACTGGGACGTTCAGCTTCTCGGAGACCAGC +
Preference number: 6 (lower is better)
Translates to: SARALPLNSSRC*RTGTFSFSETS
Trigger: GCTGGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCAGCAGCGGCTGCTGTTCAAGGGCAAGGCCCTGGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369653.8
ENST00000369660.9
CDS GCA 72 bp TGGCGCACTGGGACGTTCAGCTTCTCGGAGACCAGCTaGTTCAGCGTGGACACCAGCTCGTCCTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: WRTGTFSFSETS*FSVDTSSSSGT
Trigger: GGTGCCAGAGGACGAGCTGGTGTCCACGCTGAAGCAGCTGGTCTCCGAGAAGCTGAACGTCCCAGTGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369653.8
ENST00000369660.9
ENST00000417913.1
ENST00000481237.1