RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE4A (Homo sapiens)

Ensembl gene IDs: ENSG00000110344

Ensembl transcript IDs: ENST00000252108.8, ENST00000431736.6, ENST00000545354.1

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGAGAAATAGCAGGGTaGCGGGAAGTTTTAGTAGTT +
Preference number: 2 (lower is better)
Translates to: VSSPPSIGRIALPILIKKREIAG*REVLVV
Trigger: AACTACTAAAACTTCCCGCCACCCTGCTATTTCTCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
3UTR CAA 90 bp TTTCATAAGAGAATAAGGGCCCAACAGTCTCCTCACCCCCATCAATaGGTAGGATTGCCCTACCAATCCTCATTAAAAAGACTGTATAAC +
Preference number: 2 (lower is better)
Translates to: FHKRIRAQQSPHPHQ*VGLPYQSSLKRLYN
Trigger: GTTATACAGTCTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGACTGTTGGGCCCTTATTCTCTTATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
3UTR-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGAGACAACAGAGGGTaGAAATTAGTGATGATTTCT +
Preference number: 2 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRDNRG*KLVMIS
Trigger: AGAAATCATCACTAATTTTCACCCTCTGTTGTCTCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
3UTR-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGTTAAGTCTAGATCATaGGGACTAGTAAATACACAG +
Preference number: 2 (lower is better)
Translates to: VSSPPSIGRIALPILIKKVKSRS*GLVNTQ
Trigger: CTGTGTATTTACTAGTCCTCATGATCTAGACTTAAC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
3UTR-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAAACAATTGTTTATCTaGACTCTGGGGTTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: VSSPPSIGRIALPILIKKKQLFI*TLGLVL
Trigger: CAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGGCAGAGCCTGAAGTaGCAGCAGCGACGACACGAC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRQSLK*QQRRHD
Trigger: GTCGTGTCGTCGCTGCTGGCACTTCAGGCTCTGCCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252108.8
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGTCCCGCCAGGCAACCTaGAGCCGATGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKSRQAT*SRCRFW
Trigger: CCAAAATCTGCATCGGCTGCAGGTTGCCTGGCGGGA...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAAGGGATTTGGGGTCTaGTCCAGGTGGGGCATCACT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKKGFGV*SRWGIT
Trigger: AGTGATGCCCCACCTGGATCAGACCCCAAATCCCTT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGGGCTAGAACTTTGCTaGGCATCCCGCCAGGCAACC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQGLELC*ASRQAT
Trigger: GGTTGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGACACCTCTGCTAGTTTaGCCCTCAGGTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKTPLLV*PSGGDS
Trigger: AGAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGGCCTCCTGTACTTTaGTCTCCTGGGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQWPPVL*SPGGWN
Trigger: GTTCCAGCCCCCAGGAGATCAAAGTACAGGAGGCCA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGGCTAGAACTTTGCTaGGCATCCCGCCAGGCAACC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGLELC*ASRQAT
Trigger: GGTTGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAATGTGCCTCTCTCCTaGATCTCGATCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKNVPLS*ISISRE
Trigger: CTCTCTGCTGATCGAGATGCAGGAGAGAGGCACATT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCGGCCTGCATTTGCATaGAAACAGTTTCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRPAFA*KQFPSQ
Trigger: CTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGATTGGCCCAAATCTTaGTGCGGCCTGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKDWPKS*CGLHLH
Trigger: ATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCGGCTCCTGCACAGCTaGGATCAAACAGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRLLHS*DQTGFF
Trigger: AAAGAAACCTGTTTGATCCCAGCTGTGCAGGAGCCG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCCAGTAGAACAGCCATaGACACCTGCAAGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKPVEQP*TPASLG
Trigger: GCCTAAACTTGCAGGTGTCCATGGCTGTTCTACTGG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGACTGGAGGCAGCATaGGGGTTGTTAACTAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRLEAA*GLLTRK
Trigger: CTTCCTAGTTAACAACCCCCATGCTGCCTCCAGTCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGCCTCCTGTACTTTaGTCTCCTGGGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWPPVL*SPGGWN
Trigger: GTTCCAGCCCCCAGGAGATCAAAGTACAGGAGGCCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCTCCAGGGAATCTGCTaGTGTCTCCAAAATGTCATC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKLQGIC*CLQNVI
Trigger: GATGACATTTTGGAGACATCAGCAGATTCCCTGGAG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAAGGGATTTGGGGTCTaGTCCAGGTGGGGCATCACT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSKGFGV*SRWGIT
Trigger: AGTGATGCCCCACCTGGATCAGACCCCAAATCCCTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGTCTTCTGGTACATTTaGCCATTGGTAGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKVFWYI*PLVGSL
Trigger: CAAGGACCCTACCAATGGGCAAATGTACCAGAAGAC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGAGAGGATCTGGGTTTaGAAAATGGCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKERIWV*KMAGIA
Trigger: AGCTATGCCAGCCATTTTGCAAACCCAGATCCTCTC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCCCGCCAGGCAACCTaGAGCCGATGCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSRQAT*SRCRFW
Trigger: CCAAAATCTGCATCGGCTGCAGGTTGCCTGGCGGGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCACCCAGTAGACTTATaGTCTGTGCAATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKHPVDL*SVQWLL
Trigger: AAGCAGCCATTGCACAGAGCATAAGTCTACTGGGTG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGATTATCCGAGTCATCTaGGCTAGCTGGGAGTTCATC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKIIRVI*ASWEFI
Trigger: GATGAACTCCCAGCTAGCCCAGATGACTCGGATAAT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCCCAGCAAGGTCTTCTaGTACATTTGCCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKPSKVF*YICPLV
Trigger: TACCAATGGGCAAATGTACCAGAAGACCTTGCTGGG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGGGGCTGGAACGAGATaGATTCAAAAAGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKGAGTR*IQKVAM
Trigger: CATGGCTACTTTTTGAATCCATCTCGTTCCAGCCCC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGGAGCCGAGAGGATCTaGGTTTGCAAAATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSGAERI*VCKMAG
Trigger: GCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGGATACCAAGGGATTTaGGGTCTGATCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQGYQGI*GLIQVG
Trigger: CCCCACCTGGATCAGACCCCAAATCCCTTGGTATCC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGATACCAAGGGATTTaGGGTCTGATCCAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGYQGI*GLIQVG
Trigger: CCCCACCTGGATCAGACCCCAAATCCCTTGGTATCC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCATCCTTGGGCACAGTaGCACAGAAATTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKHPWAQ*HRNSPH
Trigger: ATGAGGAGAATTTCTGTGCCACTGTGCCCAAGGATG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGTGTTTGGCCGGATCTaGTCCATGGTGAGGGGACTA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSVFGRI*SMVRGL
Trigger: TAGTCCCCTCACCATGGACCAGATCCGGCCAAACAC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGTAGGGTCCTTGGGCTaGATGTATTCTACAAAAACC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKVGSLG*MYSTKT
Trigger: GGTTTTTGTAGAATACATTCAGCCCAAGGACCCTAC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAAGGGATTTGGGGTCTaGTCCAGGTGGGGCATCACT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYKGFGV*SRWGIT
Trigger: AGTGATGCCCCACCTGGATCAGACCCCAAATCCCTT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTCAACATGGAGATaGTGCGCTCAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSSTWR*CAQPGR
Trigger: CCTTCCTGGCTGAGCGCATCATCTCCATGTTGAACT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGTTCAACATGGAGATaGTGCGCTCAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSSSTWR*CAQPGR
Trigger: CCTTCCTGGCTGAGCGCATCATCTCCATGTTGAACT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCTGCTCTTTTTGGATTaGCGCAAACTGTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKLLFLD*RKLFGI
Trigger: GATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGTGAGGTTTCTGCACTaGACTGCAAAGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHVRFLH*TAKGSR
Trigger: CCTGCTACCCTTTGCAGTGCAGTGCAGAAACCTCAC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGGCCCAAATCTTGGTaGGGCCTGCATTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQWPKSW*GLHLHA
Trigger: TGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGAAACTTCGGCTCCTaGACAGCTGGGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGNFGS*TAGIKQ
Trigger: CTGTTTGATCCCAGCTGTGCAGGAGCCGAAGTTTCC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGACAGCCATGGACACCTaGAAGTTTAGGCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKTAMDT*KFRQFC
Trigger: ACAAAACTGCCTAAACTTGCAGGTGTCCATGGCTGT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGCTGTGAGCCCTCATTaGCTATGGCCAGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSAVSPH*LWPVEP
Trigger: TGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGTGCATACTGAAAGTTaGAGAACACACGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKVHTES*RTHVSG
Trigger: ACCGGAAACGTGTGTTCTGCAACTTTCAGTATGCAC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCTCTGCAAGTTGGGGTaGATACTGAAAGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKLCKLG*ILKVAE
Trigger: TTCTGCAACTTTCAGTATGCACCCCAACTTGCAGAG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGACTCGAACTGTCTGTaGAAAGAGAGTTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKDSNCL*KESWGI
Trigger: TATTCCCCAACTCTCTTTGCACAGACAGTTCGAGTC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGCCGCAAACTGTTTaGCATCAGCCAGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLPQTV*HQPGSQ
Trigger: TTGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGTCAACATAGATCTCTaGGGTGAGAAGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKVNIDL*GEKNCS
Trigger: CGAACAGTTCTTCTCACCCCAGAGATCTATGTTGAC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGAGCCGAGAGGATCTaGGTTTGCAAAATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGAERI*VCKMAG
Trigger: GCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACACACCTCTGCTAGTTTaGCCCTCAGGTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHTPLLV*PSGGDS
Trigger: AGAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGACACCTCTGCTAGTTTaGCCCTCAGGTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQTPLLV*PSGGDS
Trigger: AGAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATCCGGTGGAACACACTaGATACCAAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSSGGTH*IPRDLG
Trigger: CCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTCTCGGCGGGCTTCTaGAGTCAGACTATCCCATTC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHFSAGF*SQTIPF
Trigger: GAATGGGATAGTCTGACTCCAGAAGCCCGCCGAGAA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTAAGGCACCCATCTTaGGGCCAACCAGGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLRHPS*GQPGVA
Trigger: TGCAACACCTGGTTGGCCCCAAGATGGGTGCCTTAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGTGTTTGGCCGGATCTaGTCCATGGTGAGGGGACTA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYVFGRI*SMVRGL
Trigger: TAGTCCCCTCACCATGGACCAGATCCGGCCAAACAC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGTGTTTGGCCGGATCTaGTCCATGGTGAGGGGACTA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSVFGRI*SMVRGL
Trigger: TAGTCCCCTCACCATGGACCAGATCCGGCCAAACAC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
3UTR CAA 72 bp GCCCAACAGTCTCCTCACCCCCATCAATTGGTAGGATaGCCCTACCAATCCTCATTAAAAAGACTGTATAAC +
Preference number: 4 (lower is better)
Translates to: AQQSPHPHQLVG*PYQSSLKRLYN
Trigger: GTTATACAGTCTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGACTGTTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
3UTR CAA 72 bp AGAATAAGGGCCCAACAGTCTCCTCACCCCCATCAATaGGTAGGATTGCCCTACCAATCCTCATTAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RIRAQQSPHPHQ*VGLPYQSSLKR
Trigger: TCTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGACTGTTGGGCCCTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGCCTATGGCCAGTTaGACCAGTAGAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLPMAS*TSRTAM
Trigger: CATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGGTCTGCAAGAGACTTaGTTCTCTCTGCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSGLQET*FSLPSC
Trigger: GCAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAATGTGCCTCTCTCCTaGATCTCGATCAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQNVPLS*ISISRE
Trigger: CTCTCTGCTGATCGAGATGCAGGAGAGAGGCACATT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGTGAGGTTTCTGCACTaGACTGCAAAGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYVRFLH*TAKGSR
Trigger: CCTGCTACCCTTTGCAGTGCAGTGCAGAAACCTCAC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCGGCCTGCATTTGCATaGAAACAGTTTCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQRPAFA*KQFPSQ
Trigger: CTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGTGCGGCCTGCATTTaGATGCAAACAGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGAACI*MQTVSK
Trigger: CTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGAAACTTCGGCTCCTaGACAGCTGGGATCAAACAG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGNFGS*TAGIKQ
Trigger: CTGTTTGATCCCAGCTGTGCAGGAGCCGAAGTTTCC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGCTGTGAGCCCTCATTaGCTATGGCCAGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYAVSPH*LWPVEP
Trigger: TGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGACTTGATTCTCTCTaGCAAGTTGCTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRLDSL*QVAESH
Trigger: ATGGCTTTCAGCAACTTGGCAGAGAGAATCAAGTCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTGCCGCAAACTGTTTaGCATCAGCCAGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLPQTV*HQPGSQ
Trigger: TTGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCCCGCTTTTCAAGCTaGGATCACTGTTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSRFSS*DHCCPE
Trigger: CTCTGGACAACAGTGATCCCAGCTTGAAAAGCGGGA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATCCCGCTTTTCAAGCTaGGATCACTGTTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSSRFSS*DHCCPE
Trigger: CTCTGGACAACAGTGATCCCAGCTTGAAAAGCGGGA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGATTGGCCCAAATCTTaGTGCGGCCTGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHDWPKS*CGLHLH
Trigger: ATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTCTGGCATCTGATTaGCCCAAATCTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQFLASD*PKSWCG
Trigger: GCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACCAGTAGAACAGCCATaGACACCTGCAAGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSPVEQP*TPASLG
Trigger: GCCTAAACTTGCAGGTGTCCATGGCTGTTCTACTGG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCCGGTGGAACACACTaGATACCAAGGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSGGTH*IPRDLG
Trigger: CCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTCTCGGCGGGCTTCTaGAGTCAGACTATCCCATTC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSFSAGF*SQTIPF
Trigger: GAATGGGATAGTCTGACTCCAGAAGCCCGCCGAGAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTCTCGGCGGGCTTCTaGAGTCAGACTATCCCATTC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYFSAGF*SQTIPF
Trigger: GAATGGGATAGTCTGACTCCAGAAGCCCGCCGAGAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTAAGGCACCCATCTTaGGGCCAACCAGGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLRHPS*GQPGVA
Trigger: TGCAACACCTGGTTGGCCCCAAGATGGGTGCCTTAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGCAAAGGGGTTACTTaGGATGTTGTTGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKSKGVT*DVVVIL
Trigger: GAGAATAACAACAACATCTCAAGTAACCCCTTTGCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTCATCCAGGCTCTCTaGCACGCTATTATCCGAGTC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYFIQAL*HAIIRV
Trigger: GACTCGGATAATAGCGTGTCAGAGAGCCTGGATGAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTCATCCAGGCTCTCTaGCACGCTATTATCCGAGTC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSFIQAL*HAIIRV
Trigger: GACTCGGATAATAGCGTGTCAGAGAGCCTGGATGAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTGCCTATGGCCAGTTaGACCAGTAGAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLPMAS*TSRTAM
Trigger: CATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTGCCTATGGCCAGTTaGACCAGTAGAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLPMAS*TSRTAM
Trigger: CATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGTTGGGGTGCATACTaGAAGTTGCAGAACACACGT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSSWGAY*KLQNTR
Trigger: ACGTGTGTTCTGCAACTTTCAGTATGCACCCCAACT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGTCTGCAAGAGACTTaGTTCTCTCTGCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGLQET*FSLPSC
Trigger: GCAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGGTCTGCAAGAGACTTaGTTCTCTCTGCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSGLQET*FSLPSC
Trigger: GCAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGGATCTATCCACAGTaGCTCTGGAAGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYWIYPQ*LWKMAA
Trigger: TGCTGCCATCTTCCAGAGTCACTGTGGATAGATCCA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGATCTATCCACAGTaGCTCTGGAAGATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWIYPQ*LWKMAA
Trigger: TGCTGCCATCTTCCAGAGTCACTGTGGATAGATCCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGCTCAAGTTCACTTATaGAAGTGGTGTCCACCTACC +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSAQVHL*KWCPPT
Trigger: GGTAGGTGGACACCACTTTCATAAGTGAACTTGAGC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGGGCCTGCTCAACATTaGTCATATCAAGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSGPAQH*SYQASL
Trigger: AAGACTGGCTTGATATGAGCAATGTTGAGCAGGCCC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGGCCTGCTCAACATTaGTCATATCAAGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGPAQH*SYQASL
Trigger: AAGACTGGCTTGATATGAGCAATGTTGAGCAGGCCC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGGTGCGGCCTGCATTTaGATGCAAACAGTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSGAACI*MQTVSK
Trigger: CTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTCAGCCAGGAAGGGATaGACAAAGAGTGACTTGATC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSARKG*TKSDLI
Trigger: GATCAAGTCACTCTTTGTGCATCCCTTCCTGGCTGA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGCTCTGTGCAATGGCTaGTTAGCAACCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHALCNG*LATTIK
Trigger: TTTGATGGTGGTTGCTAAGCAGCCATTGCACAGAGC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGCTCTGTGCAATGGCTaGTTAGCAACCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQALCNG*LATTIK
Trigger: TTTGATGGTGGTTGCTAAGCAGCCATTGCACAGAGC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACACCCAGTAGACTTATaGTCTGTGCAATGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSHPVDL*SVQWLL
Trigger: AAGCAGCCATTGCACAGAGCATAAGTCTACTGGGTG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGTCATCTGGGCTAGCTaGGAGTTCATCAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSVIWAS*EFIRLL
Trigger: CAACAATCTGATGAACTCCCAGCTAGCCCAGATGAC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGTCATCTGGGCTAGCTaGGAGTTCATCAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHVIWAS*EFIRLL
Trigger: CAACAATCTGATGAACTCCCAGCTAGCCCAGATGAC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACCCAGCAAGGTCTTCTaGTACATTTGCCCATTGGTA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSPSKVF*YICPLV
Trigger: TACCAATGGGCAAATGTACCAGAAGACCTTGCTGGG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGTACTTTGATCTCCTaGGGGCTGGAACGAGATGGA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSCTLIS*GLERDG
Trigger: TCCATCTCGTTCCAGCCCCCAGGAGATCAAAGTACA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGTACTTTGATCTCCTaGGGGCTGGAACGAGATGGA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYCTLIS*GLERDG
Trigger: TCCATCTCGTTCCAGCCCCCAGGAGATCAAAGTACA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTTCTGGCATCTGATTaGCCCAAATCTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYFLASD*PKSWCG
Trigger: GCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGTTTGCAAAATGGCTaGCATAGCTTCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGLQNG*HSFRRA
Trigger: TGCTCTCCTGAAGCTATGCCAGCCATTTTGCAAACC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGGTTTGCAAAATGGCTaGCATAGCTTCAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSGLQNG*HSFRRA
Trigger: TGCTCTCCTGAAGCTATGCCAGCCATTTTGCAAACC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAAGGTTGTAGTTCTGTaGAAACTTCGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHKVVVL*KLRLLH
Trigger: GTGCAGGAGCCGAAGTTTCCACAGAACTACAACCTT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCCAGTAGAACAGCCATaGACACCTGCAAGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYPVEQP*TPASLG
Trigger: GCCTAAACTTGCAGGTGTCCATGGCTGTTCTACTGG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCCCTCATTGCCTATaGCCAGTTGAACCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSPHCL*PVEPVE
Trigger: TTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAACACACGTTTCCGGTaGAACACACTGGATACCAAG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQNTRFR*NTLDTK
Trigger: CTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAACACACGTTTCCGGTaGAACACACTGGATACCAAG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSNTRFR*NTLDTK
Trigger: CTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATCCTTGGGCACAGTaGCACAGAAATTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSHPWAQ*HRNSPH
Trigger: ATGAGGAGAATTTCTGTGCCACTGTGCCCAAGGATG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCCTCTTCCTGTTGTTaGAGGTCTGCAAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSSSCC*RSARDL
Trigger: CAAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATCCTCTTCCTGTTGTTaGAGGTCTGCAAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSSSSCC*RSARDL
Trigger: CAAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCACGGGCTCCCTGGATaGCTTCTAACATCAAATCTA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQHGLPG*LLTSNL
Trigger: TAGATTTGATGTTAGAAGCCATCCAGGGAGCCCGTG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTACTCACGGGCTCCCTaGATGGCTTCTAACATCAAA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHYSRAP*MASNIK
Trigger: TTTGATGTTAGAAGCCATCCAGGGAGCCCGTGAGTA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431736.6
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATATCAAGCCAGTCTTaGTCTTCTAGCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHISSQS*SSSSTA
Trigger: GGCAGTAGAGCTAGAAGATCAAGACTGGCTTGATAT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGGTTGCCTGGATCTTaGAGTAATAAGCGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYWLPGS*SNKRAK
Trigger: CTTCGCTCGCTTATTACTTCAAGATCCAGGCAACCA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGTTGCCTGGATCTTaGAGTAATAAGCGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWLPGS*SNKRAK
Trigger: CTTCGCTCGCTTATTACTTCAAGATCCAGGCAACCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCATAGATCTCTGGGGTaGGAAGAACTGTTCGGGTAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYHRSLG*EELFGY
Trigger: ATACCCGAACAGTTCTTCTCACCCCAGAGATCTATG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGTAGGGTCCTTGGGCTaGATGTATTCTACAAAAACC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQVGSLG*MYSTKT
Trigger: GGTTTTTGTAGAATACATTCAGCCCAAGGACCCTAC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAAGATTTCTGGCATCTaGTTGGCCCAAATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQKISGI*LAQILV
Trigger: CACCAAGATTTGGGCCAATCAGATGCCAGAAATCTT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAGCGGCGGAGAAAAATaGGAAAATCACCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSGGEK*ENHPGY
Trigger: ATAACCTGGGTGATTTTCTCATTTTTCTCCGCCGCT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGCGGCGGAGAAAAATaGGAAAATCACCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSSGGEK*ENHPGY
Trigger: ATAACCTGGGTGATTTTCTCATTTTTCTCCGCCGCT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCTCCAGGGAATCTGCTaGTGTCTCCAAAATGTCATC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLQGIC*CLQNVI
Trigger: GATGACATTTTGGAGACATCAGCAGATTCCCTGGAG...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCTCCAGGGAATCTGCTaGTGTCTCCAAAATGTCATC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLQGIC*CLQNVI
Trigger: GATGACATTTTGGAGACATCAGCAGATTCCCTGGAG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGTTGGGGTGCATACTaGAAGTTGCAGAACACACGT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSWGAY*KLQNTR
Trigger: ACGTGTGTTCTGCAACTTTCAGTATGCACCCCAACT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGATAGTGCAGATATCTaGTACAAGCTGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSDSADI*YKLLGF
Trigger: AAACCCCAGCAGCTTGTATCAGATATCTGCACTATC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGATCTGTTTGGTCACTaGGCAAATGTCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSDLFGH*ANVLQW
Trigger: CCATTGCAAGACATTTGCTCAGTGACCAAACAGATC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGATCTGTTTGGTCACTaGGCAAATGTCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQDLFGH*ANVLQW
Trigger: CCATTGCAAGACATTTGCTCAGTGACCAAACAGATC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGTATCTGCTTTTATGTaGAGTTACTCTGTAACACAG +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKVSAFM*SYSVTQ
Trigger: CTGTGTTACAGAGTAACTTCACATAAAAGCAGATAC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGCTCAAGTTCACTTATaGAAGTGGTGTCCACCTACC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYAQVHL*KWCPPT
Trigger: GGTAGGTGGACACCACTTTCATAAGTGAACTTGAGC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGGAATAGCTGCCTTCTaGGTTTTTGTGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQGIAAF*VFVPIF
Trigger: GAAAATGGGCACAAAAACTCAGAAGGCAGCTATTCC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGGAATAGCTGCCTTCTaGGTTTTTGTGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSGIAAF*VFVPIF
Trigger: GAAAATGGGCACAAAAACTCAGAAGGCAGCTATTCC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGTCCCTTTCTATGACTaGGTTGCTGTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHVPFYD*VAVFFL
Trigger: GAGGAAGAAAACAGCAACTCAGTCATAGAAAGGGAC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGCTCACATATTTCCTaGTGTGATCGGAATGAGCGG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYCSHIS*CDRNER
Trigger: CCGCTCATTCCGATCACAGCAGGAAATATGTGAGCA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGTCTTCTGGTACATTTaGCCATTGGTAGGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSVFWYI*PLVGSL
Trigger: CAAGGACCCTACCAATGGGCAAATGTACCAGAAGAC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGAGAGGATCTGGGTTTaGAAAATGGCTGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSERIWV*KMAGIA
Trigger: AGCTATGCCAGCCATTTTGCAAACCCAGATCCTCTC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAACAGCCATGGACACCTaGAAGTTTAGGCAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSTAMDT*KFRQFC
Trigger: ACAAAACTGCCTAAACTTGCAGGTGTCCATGGCTGT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGTGCATACTGAAAGTTaGAGAACACACGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQVHTES*RTHVSG
Trigger: ACCGGAAACGTGTGTTCTGCAACTTTCAGTATGCAC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGTGCATACTGAAAGTTaGAGAACACACGTTTCCGGT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSVHTES*RTHVSG
Trigger: ACCGGAAACGTGTGTTCTGCAACTTTCAGTATGCAC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGATGTTATGGAAACGTaGCAGCTGTCCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQDVMET*QLSKHL
Trigger: CAGATGTTTGGACAGCTGGCACGTTTCCATAACATC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGATGTTATGGAAACGTaGCAGCTGTCCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHDVMET*QLSKHL
Trigger: CAGATGTTTGGACAGCTGGCACGTTTCCATAACATC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCAGCCAGGAAGGGATaGACAAAGAGTGACTTGATC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSARKG*TKSDLI
Trigger: GATCAAGTCACTCTTTGTGCATCCCTTCCTGGCTGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTCAGCCAGGAAGGGATaGACAAAGAGTGACTTGATC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSARKG*TKSDLI
Trigger: GATCAAGTCACTCTTTGTGCATCCCTTCCTGGCTGA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGACTCGAACTGTCTGTaGAAAGAGAGTTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQDSNCL*KESWGI
Trigger: TATTCCCCAACTCTCTTTGCACAGACAGTTCGAGTC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCATGCAACCTGAGATaGAATCTAAGAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSCNLR*NLRAAS
Trigger: GGAAGCTGCTCTTAGATTGCATCTCAGGTTGCATGA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGTCAACATAGATCTCTaGGGTGAGAAGAACTGTTCG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHVNIDL*GEKNCS
Trigger: CGAACAGTTCTTCTCACCCCAGAGATCTATGTTGAC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGTGGAATCATGACTTCTaGAAATGTTCTAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKWNHDF*KCSNFL
Trigger: GAGGAAGTTAGAACATTTCCAGAAGTCATGATTCCA...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGGGGCTGGAACGAGATaGATTCAAAAAGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSGAGTR*IQKVAM
Trigger: CATGGCTACTTTTTGAATCCATCTCGTTCCAGCCCC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGTTGGAAAAAGATTTCTaGCATCTGATTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: VSSPPSIGRIALPILIKKLEKDF*HLIGPN
Trigger: ATTTGGGCCAATCAGATGCCAGAAATCTTTTTCCAA...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAAGGTTGTAGTTCTGTaGAAACTTCGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSKVVVL*KLRLLH
Trigger: GTGCAGGAGCCGAAGTTTCCACAGAACTACAACCTT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGCCCTCATTGCCTATaGCCAGTTGAACCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSPHCL*PVEPVE
Trigger: TTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGCCCTCATTGCCTATaGCCAGTTGAACCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSPHCL*PVEPVE
Trigger: TTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAACACACGTTTCCGGTaGAACACACTGGATACCAAG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYNTRFR*NTLDTK
Trigger: CTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATTGGACATGATGTTATaGAAACGTGCCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSLDMML*KRASCP
Trigger: TGGACAGCTGGCACGTTTCCATAACATCATGTCCAA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTGGACATGATGTTATaGAAACGTGCCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHLDMML*KRASCP
Trigger: TGGACAGCTGGCACGTTTCCATAACATCATGTCCAA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCCTCTTCCTGTTGTTaGAGGTCTGCAAGAGACTTG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSSSCC*RSARDL
Trigger: CAAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATATCAAGCCAGTCTTaGTCTTCTAGCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSISSQS*SSSSTA
Trigger: GGCAGTAGAGCTAGAAGATCAAGACTGGCTTGATAT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAAGATTTCTGGCATCTaGTTGGCCCAAATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYKISGI*LAQILV
Trigger: CACCAAGATTTGGGCCAATCAGATGCCAGAAATCTT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGCGGCGGAGAAAAATaGGAAAATCACCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSGGEK*ENHPGY
Trigger: ATAACCTGGGTGATTTTCTCATTTTTCTCCGCCGCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAAAATGGTGATAAAGTaGAGGACATGCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSKMVIK*RTCSRE
Trigger: TTCCCTGGAGCATGTCCTTCACTTTATCACCATTTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAAAATGGTGATAAAGTaGAGGACATGCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHKMVIK*RTCSRE
Trigger: TTCCCTGGAGCATGTCCTTCACTTTATCACCATTTT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGTCCACAAAAACCTTaGTTAGAGCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQCPQKP*LEPLQV
Trigger: AACTTGCAGAGGCTCTAATCAAGGTTTTTGTGGACA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGATAGTGCAGATATCTaGTACAAGCTGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSDSADI*YKLLGF
Trigger: AAACCCCAGCAGCTTGTATCAGATATCTGCACTATC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGATCTGTTTGGTCACTaGGCAAATGTCTTGCAATGG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYDLFGH*ANVLQW
Trigger: CCATTGCAAGACATTTGCTCAGTGACCAAACAGATC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGCAACCTGCAGCCGATaGAGATTTTGGTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSATCSR*RFWLIF
Trigger: AAAAATCAACCAAAATCTGCATCGGCTGCAGGTTGC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATCAGTCGTTCAAACTaGTCACGAAGATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHISRSN*SRRLSA
Trigger: TGCTGACAATCTTCGTGAGCAGTTTGAACGACTGAT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAATCAGTCGTTCAAACTaGTCACGAAGATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSISRSN*SRRLSA
Trigger: TGCTGACAATCTTCGTGAGCAGTTTGAACGACTGAT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCTCTGCAAGTTGGGGTaGATACTGAAAGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLCKLG*ILKVAE
Trigger: TTCTGCAACTTTCAGTATGCACCCCAACTTGCAGAG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGATGTTATGGAAACGTaGCAGCTGTCCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYDVMET*QLSKHL
Trigger: CAGATGTTTGGACAGCTGGCACGTTTCCATAACATC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGACTCGAACTGTCTGTaGAAAGAGAGTTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYDSNCL*KESWGI
Trigger: TATTCCCCAACTCTCTTTGCACAGACAGTTCGAGTC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGACTTGATTCTCTCTaGCAAGTTGCTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHRLDSL*QVAESH
Trigger: ATGGCTTTCAGCAACTTGGCAGAGAGAATCAAGTCT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCTGTTGTTGGAGGTCTaGAAGAGACTTGATTCTCTC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLLLEV*KRLDSL
Trigger: GAGAGAATCAAGTCTCTTGCAGACCTCCAACAACAG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCTGTTGTTGGAGGTCTaGAAGAGACTTGATTCTCTC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLLLEV*KRLDSL
Trigger: GAGAGAATCAAGTCTCTTGCAGACCTCCAACAACAG...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGACTGAGCAAATGTCTTaGAATGGTGGATCTATCCAC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQTEQMS*NGGSIH
Trigger: GTGGATAGATCCACCATTGCAAGACATTTGCTCAGT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACACTGAGCAAATGTCTTaGAATGGTGGATCTATCCAC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHTEQMS*NGGSIH
Trigger: GTGGATAGATCCACCATTGCAAGACATTTGCTCAGT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATTGTTGTTTCCTCTCTaGAAGCCACCGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSLLFPL*KPPLDF
Trigger: AAAATCCAACGGTGGCTTGCAGAGAGGAAACAACAA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGGATATGATACCCGTTaGCTAAATCTACTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQGYDTR*LNLLRP
Trigger: AGGCCTAAGTAGATTTAGGCAACGGGTATCATATCC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAATGGGCTCCCTGGATaGCTTCTAACATCAAATCTA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQNGLPG*LLTSNL
Trigger: TAGATTTGATGTTAGAAGCCATCCAGGGAGCCCATT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252108.8
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGTTACATCTTCAAAATaGGCTCCCTGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYVTSSK*APWMAS
Trigger: AGAAGCCATCCAGGGAGCCCATTTTGAAGATGTAAC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252108.8
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGTTTGGCCCTCAGGTaGGGATTCTTCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSLALR*GFFILS
Trigger: AGAAAGAATGAAGAATCCCCACCTGAGGGCCAAACT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGTTTGGCCCTCAGGTaGGGATTCTTCATTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSLALR*GFFILS
Trigger: AGAAAGAATGAAGAATCCCCACCTGAGGGCCAAACT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTGGACATGATGTTATaGAAACGTGCCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLDMML*KRASCP
Trigger: TGGACAGCTGGCACGTTTCCATAACATCATGTCCAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGATCCTTTGGATCATGTaGTTGATGTTGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQILWIM*LMLSCS
Trigger: TGAGCAACTCAACATCAATCACATGATCCAAAGGAT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGCATACAAAAGGATCTaGCAGAGCTCTAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHAYKRI*QSSRSF
Trigger: AAAAGATCTAGAGCTCTGTCAGATCCTTTTGTATGC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGCATACAAAAGGATCTaGCAGAGCTCTAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQAYKRI*QSSRSF
Trigger: AAAAGATCTAGAGCTCTGTCAGATCCTTTTGTATGC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGTCCACAAAAACCTTaGTTAGAGCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSCPQKP*LEPLQV
Trigger: AACTTGCAGAGGCTCTAATCAAGGTTTTTGTGGACA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGTCCACAAAAACCTTaGTTAGAGCCTCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYCPQKP*LEPLQV
Trigger: AACTTGCAGAGGCTCTAATCAAGGTTTTTGTGGACA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAACTTCTGTTCAAATTaGTGGGGGTCTCCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQNFCSN*WGSPVN
Trigger: ATTTACAGGAGACCCCCATCAATTTGAACAGAAGTT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAACTTCTGTTCAAATTaGTGGGGGTCTCCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSNFCSN*WGSPVN
Trigger: ATTTACAGGAGACCCCCATCAATTTGAACAGAAGTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTGTTTCATTGGACATaGTGTTATGGAAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHLFHWT*CYGNVP
Trigger: TGGCACGTTTCCATAACATCATGTCCAATGAAACAA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATTGTTTCATTGGACATaGTGTTATGGAAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSLFHWT*CYGNVP
Trigger: TGGCACGTTTCCATAACATCATGTCCAATGAAACAA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGTTTCATTGGACATaGTGTTATGGAAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLFHWT*CYGNVP
Trigger: TGGCACGTTTCCATAACATCATGTCCAATGAAACAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCGGCAATGTGTTGACTaGGTAGTTTTGAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQRQCVD*VVLKNA
Trigger: AGCATTTTTCAAAACTACTCAGTCAACACATTGCCG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTCCGGCAATGTGTTaGCTGAGTAGTTTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSLPAMC*LSSFEK
Trigger: TTTTTCAAAACTACTCAGTCAACACATTGCCGGAAG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545354.1
CDS-3UTR GCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTCATCAGATTGTTaGTTCAGCTGCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSSSDC*FSCSFW
Trigger: CCAAAAAGAGCAGCTGAAGCAACAATCTGATGAACT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGCAACCTGCAGCCGATaGAGATTTTGGTTGATTTTT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSATCSR*RFWLIF
Trigger: AAAAATCAACCAAAATCTGCATCGGCTGCAGGTTGC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATATCAGTCGTTCAAACTaGTCACGAAGATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYISRSN*SRRLSA
Trigger: TGCTGACAATCTTCGTGAGCAGTTTGAACGACTGAT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGACTTGATTCTCTCTaGCAAGTTGCTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYRLDSL*QVAESH
Trigger: ATGGCTTTCAGCAACTTGGCAGAGAGAATCAAGTCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTGTTGTTTCCTCTCTaGAAGCCACCGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLLFPL*KPPLDF
Trigger: AAAATCCAACGGTGGCTTGCAGAGAGGAAACAACAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTGTTGTTTCCTCTCTaGAAGCCACCGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLLFPL*KPPLDF
Trigger: AAAATCCAACGGTGGCTTGCAGAGAGGAAACAACAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGATAAGTATAATTTCCTaGAAGCCAGGGGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQISIIS*KPGEHC
Trigger: ACAATGCTCCCCTGGCTTGCAGGAAATTATACTTAT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGATATGATACCCGTTaGCTAAATCTACTTAGGCCT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGYDTR*LNLLRP
Trigger: AGGCCTAAGTAGATTTAGGCAACGGGTATCATATCC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCAAAATGGGCTCCCTaGATGGCTTCTAACATCAAA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSKWAP*MASNIK
Trigger: TTTGATGTTAGAAGCCATCCAGGGAGCCCATTTTGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252108.8
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTACAAGATACAGTGTTTaGTTTCTGGAGAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSTRYSV*FLERAG
Trigger: TCCAGCTCTCTCCAGAAACCAAACACTGTATCTTGT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGAGAAATAGCAGGGTaGCGGGAAGTTTTAGTAGTT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYREIAG*REVLVV
Trigger: AACTACTAAAACTTCCCGCCACCCTGCTATTTCTCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGAGAAATAGCAGGGTaGCGGGAAGTTTTAGTAGTT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSREIAG*REVLVV
Trigger: AACTACTAAAACTTCCCGCCACCCTGCTATTTCTCT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGCAAAGGGGTTACTTaGGATGTTGTTGTTATTCTC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSKGVT*DVVVIL
Trigger: GAGAATAACAACAACATCTCAAGTAACCCCTTTGCT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAACTTCTGTTCAAATTaGTGGGGGTCTCCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYNFCSN*WGSPVN
Trigger: ATTTACAGGAGACCCCCATCAATTTGAACAGAAGTT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGAGACAACAGAGGGTaGAAATTAGTGATGATTTCT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSRDNRG*KLVMIS
Trigger: AGAAATCATCACTAATTTTCACCCTCTGTTGTCTCT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGTTAAGTCTAGATCATaGGGACTAGTAAATACACAG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQVKSRS*GLVNTQ
Trigger: CTGTGTATTTACTAGTCCTCATGATCTAGACTTAAC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCATTTTTCATGGATATaGTACCCGTTGCCTAAATCT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQHFSWI*YPLPKS
Trigger: AGATTTAGGCAACGGGTATCATATCCATGAAAAATG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCCTACTTTGTTAATTaGAGACCTAAGGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSYFVN*RPKAVL
Trigger: TAACACAGCCTTAGGTCTTCAATTAACAAAGTAGGA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTCCTACTTTGTTAATTaGAGACCTAAGGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSYFVN*RPKAVL
Trigger: TAACACAGCCTTAGGTCTTCAATTAACAAAGTAGGA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTGATTTTTACCATCTaGTCATGCAACCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLIFTI*SCNLRC
Trigger: GCATCTCAGGTTGCATGATCAGATGGTAAAAATCAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545354.1
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGTTCATCAGATTGTTaGTTCAGCTGCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSSSDC*FSCSFW
Trigger: CCAAAAAGAGCAGCTGAAGCAACAATCTGATGAACT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAATCAAATCTACCAGTTaGTCATGGATGTTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSIKSTS*SWMFWS
Trigger: TGACCAAAACATCCATGAGCAACTGGTAGATTTGAT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGATCAAATCTACCAGTTaGTCATGGATGTTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQIKSTS*SWMFWS
Trigger: TGACCAAAACATCCATGAGCAACTGGTAGATTTGAT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAATATCTGATACAAGCTaGTGGGGTTTGAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSISDTS*WGLKSN
Trigger: ATTTGACTTCAAACCCCAGCAGCTTGTATCAGATAT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGATATCTGATACAAGCTaGTGGGGTTTGAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQISDTS*WGLKSN
Trigger: ATTTGACTTCAAACCCCAGCAGCTTGTATCAGATAT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAAACAATTGTTTATCTaGACTCTGGGGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSKQLFI*TLGLVL
Trigger: CAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAAACAATTGTTTATCTaGACTCTGGGGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQKQLFI*TLGLVL
Trigger: CAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATATAAGTATAATTTCCTaGAAGCCAGGGGAGCATTGT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYISIIS*KPGEHC
Trigger: ACAATGCTCCCCTGGCTTGCAGGAAATTATACTTAT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCTGAGGCATACATTTaGAAAAAGATTTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSEAYI*KKISGI
Trigger: GATGCCAGAAATCTTTTTCCAAATGTATGCCTCAGA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTCTGAGGCATACATTTaGAAAAAGATTTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSEAYI*KKISGI
Trigger: GATGCCAGAAATCTTTTTCCAAATGTATGCCTCAGA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATGCTCAAATACTGTATaGCTTCATCCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSCSNTV*LHPKGR
Trigger: TCTTCCTTTTGGATGAAGCCATACAGTATTTGAGCA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATTAAAGGGATCTGTTTaGTCACTGAGCAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSLKGSV*SLSKCL
Trigger: AAGACATTTGCTCAGTGACCAAACAGATCCCTTTAA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTAAAGGGATCTGTTTaGTCACTGAGCAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHLKGSV*SLSKCL
Trigger: AAGACATTTGCTCAGTGACCAAACAGATCCCTTTAA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTAAAGGGATCTGTTTaGTCACTGAGCAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLKGSV*SLSKCL
Trigger: AAGACATTTGCTCAGTGACCAAACAGATCCCTTTAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGGGTTGGTTTTGGTTTaGTTAGTTCACAGTATCTAT +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQGLVLV*LVHSIY
Trigger: ATAGATACTGTGAACTAACCAAACCAAAACCAACCC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGGTTGGTTTTGGTTTaGTTAGTTCACAGTATCTAT +
Preference number: 4 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGLVLV*LVHSIY
Trigger: ATAGATACTGTGAACTAACCAAACCAAAACCAACCC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR TCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGTATCTGCTTTTATGTaGAGTTACTCTGTAACACAG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSVSAFM*SYSVTQ
Trigger: CTGTGTTACAGAGTAACTTCACATAAAAGCAGATAC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR TCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCATTTTTCATGGATATaGTACCCGTTGCCTAAATCT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYHFSWI*YPLPKS
Trigger: AGATTTAGGCAACGGGTATCATATCCATGAAAAATG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATATATCTGATACAAGCTaGTGGGGTTTGAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYISDTS*WGLKSN
Trigger: ATTTGACTTCAAACCCCAGCAGCTTGTATCAGATAT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAAACAATTGTTTATCTaGACTCTGGGGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSKQLFI*TLGLVL
Trigger: CAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGAATCATGACTTCTaGAAATGTTCTAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWNHDF*KCSNFL
Trigger: GAGGAAGTTAGAACATTTCCAGAAGTCATGATTCCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTGGAAAAAGATTTCTaGCATCTGATTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLEKDF*HLIGPN
Trigger: ATTTGGGCCAATCAGATGCCAGAAATCTTTTTCCAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGCTCAAATACTGTATaGCTTCATCCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSCSNTV*LHPKGR
Trigger: TCTTCCTTTTGGATGAAGCCATACAGTATTTGAGCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGCTCAAATACTGTATaGCTTCATCCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYCSNTV*LHPKGR
Trigger: TCTTCCTTTTGGATGAAGCCATACAGTATTTGAGCA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGGTTGGTTTTGGTTTaGTTAGTTCACAGTATCTAT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGLVLV*LVHSIY
Trigger: ATAGATACTGTGAACTAACCAAACCAAAACCAACCC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAACATCCTACTAGATTaGGTTTGGAAGATAAATGCA +
Preference number: 4 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQNILLD*VWKINA
Trigger: TGCATTTATCTTCCAAACCCAATCTAGTAGGATGTT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGCTGAATCTTTATCTTaGTCAAATACTGTATGGCTT +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSAESLS*SNTVWL
Trigger: AAGCCATACAGTATTTGAGCAAGATAAAGATTCAGC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGCTGAATCTTTATCTTaGTCAAATACTGTATGGCTT +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYAESLS*SNTVWL
Trigger: AAGCCATACAGTATTTGAGCAAGATAAAGATTCAGC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGTATCTATTCAAGTTaGTCCTTTTGTTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSIYSS*SFCCFL
Trigger: GAGGAAACAACAAAAGGAGCAACTTGAATAGATACT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR GCA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGTATCTATTCAAGTTaGTCCTTTTGTTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSIYSS*SFCCFL
Trigger: GAGGAAACAACAAAAGGAGCAACTTGAATAGATACT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CCA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAACATCCTACTAGATTaGGTTTGGAAGATAAATGCA +
Preference number: 4 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSNILLD*VWKINA
Trigger: TGCATTTATCTTCCAAACCCAATCTAGTAGGATGTT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp GCAGAACACACGTTTCCGGTGGAACACACTGGATACCAAGGGATTTaGGGTCTGATCCAGGTGGGGCATCACTGCTTCCAACACCTCTGC +
Preference number: 5 (lower is better)
Translates to: AEHTFPVEHTGYQGI*GLIQVGHHCFQHLC
Trigger: GCAGAGGTGTTGGAAGCAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp TCAAACTGCTCACGAAGATTGTCAGCAGCAGGGCTAGAACTTTGCTaGGCATCCCGCCAGGCAACCTGCAGCCGATGCAGATTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: SNCSRRLSAAGLELC*ASRQATCSRCRFWL
Trigger: CAACCAAAATCTGCATCGGCTGCAGGTTGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCTGCTGACAATCTTCGTGAGCAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp ACACGTTTCCGGTGGAACACACTGGATACCAAGGGATTTGGGGTCTaGTCCAGGTGGGGCATCACTGCTTCCAACACCTCTGCTAGTTTG +
Preference number: 5 (lower is better)
Translates to: TRFRWNTLDTKGFGV*SRWGITASNTSASL
Trigger: CAAACTAGCAGAGGTGTTGGAAGCAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp GTGCATACTGAAAGTTGCAGAACACACGTTTCCGGTGGAACACACTaGATACCAAGGGATTTGGGGTCTGATCCAGGTGGGGCATCACTG +
Preference number: 5 (lower is better)
Translates to: VHTESCRTHVSGGTH*IPRDLGSDPGGASL
Trigger: CAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTTCTGCAACTTTCAGTATGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp GCGGCTAATCTCAGCCACAGAGTAATCGAATTCATCCAGGCTCTCTaGCACGCTATTATCCGAGTCATCTGGGCTAGCTGGGAGTTCATC +
Preference number: 5 (lower is better)
Translates to: AANLSHRVIEFIQAL*HAIIRVIWASWEFI
Trigger: GATGAACTCCCAGCTAGCCCAGATGACTCGGATAATAGCGTGTCAGAGAGCCTGGATGAATTCGATTACTCTGTGGCTGAGATTAGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 90 bp CATCTGGCAAAGGAAAGGTTAGCTCTATTGGCTGTGAGCCCTCATTaGCTATGGCCAGTTGAACCAGTAGAACAGCCATGGACACCTGCA +
Preference number: 5 (lower is better)
Translates to: HLAKERLALLAVSPH*LWPVEPVEQPWTPA
Trigger: TGCAGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGAGCTAACCTTTCCTTTGCCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp GGGCTAGCTGGGAGTTCATCAGATTGTTGCTTCAGCTGCTCTTTTTaGATTGCCGCAAACTGTTTGGCATCAGCCAGGGAGCCAAAAAGA +
Preference number: 5 (lower is better)
Translates to: GLAGSSSDCCFSCSF*IAANCLASAREPKR
Trigger: TCTTTTTGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAGCAACAATCTGATGAACTCCCAGCTAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp GGATTAAAGGTGAGGAGCCGAGAGGATCTGGGTTTGCAAAATGGCTaGCATAGCTTCAGGAGAGCAGCACCCAGATTCAGAAAGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GLKVRSREDLGLQNG*HSFRRAAPRFRKKA
Trigger: TGCTTTCTTTCTGAATCTGGGTGCTGCTCTCCTGAAGCTATGCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCCTCACCTTTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp GTGAGCCCTCATTGCCTATGGCCAGTTGAACCAGTAGAACAGCCATaGACACCTGCAAGTTTAGGCAGTTTTGTAGCATTTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VSPHCLWPVEPVEQP*TPASLGSFVAFVAL
Trigger: CAGAGCCACAAATGCTACAAAACTGCCTAAACTTGCAGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp GCTGAGCATCCCGCCAGGCAACCTGCAGCCGATGCAGATTTTGGTTaGTTTTTACCATCTGATCATGCAACCTGTGAAATCCCAAGTACA +
Preference number: 5 (lower is better)
Translates to: AEHPARQPAADADFG*FLPSDHATCEIPST
Trigger: TGTACTTGGGATTTCACAGGTTGCATGATCAGATGGTAAAAATCAACCAAAATCTGCATCGGCTGCAGGTTGCCTGGCGGGATGCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 90 bp AAGGTTAGCTCTATTGGCTGTGAGCCCTCATTGCCTATGGCCAGTTaGACCAGTAGAACAGCCATGGACACCTGCAAGTTTAGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: KVSSIGCEPSLPMAS*TSRTAMDTCKFRQF
Trigger: AAACTGCCTAAACTTGCAGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGAGCTAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp GCAAAGGAAAGGTTAGCTCTATTGGCTGTGAGCCCTCATTGCCTATaGCCAGTTGAACCAGTAGAACAGCCATGGACACCTGCAAGTTTA +
Preference number: 5 (lower is better)
Translates to: AKERLALLAVSPHCL*PVEPVEQPWTPASL
Trigger: TAAACTTGCAGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGAGCTAACCTTTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp CAAATGTCTTGCAATGGTGGATCTATCCACAGTGACTCTGGAAGATaGCAGCACCACAGGGTCACACATCAGTGTGCTCATAATGGGATC +
Preference number: 5 (lower is better)
Translates to: QMSCNGGSIHSDSGR*QHHRVTHQCAHNGI
Trigger: GATCCCATTATGAGCACACTGATGTGTGACCCTGTGGTGCTGCCATCTTCCAGAGTCACTGTGGATAGATCCACCATTGCAAGACATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAGCAGGGCTAGAACTTaGCTGAGCATCCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSRART*LSIPPG
Trigger: GCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp CGAGCGAAGAGGGCCTGCTCAACATTGCTCATATCAAGCCAGTCTTaGTCTTCTAGCTCTACTGCCATTTCTTCCAAATACACACAACGG +
Preference number: 5 (lower is better)
Translates to: RAKRACSTLLISSQS*SSSSTAISSKYTQR
Trigger: CCGTTGTGTGTATTTGGAAGAAATGGCAGTAGAGCTAGAAGATCAAGACTGGCTTGATATGAGCAATGTTGAGCAGGCCCTCTTCGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 90 bp GTGAGAAGAACTGTTCGGGTATTGGACACAGTGAGGTTTCTGCACTaGACTGCAAAGGGTAGCAGGTTCTCTGGAACTTTGGTAATCTCT +
Preference number: 5 (lower is better)
Translates to: VRRTVRVLDTVRFLH*TAKGSRFSGTLVIS
Trigger: AGAGATTACCAAAGTTCCAGAGAACCTGCTACCCTTTGCAGTGCAGTGCAGAAACCTCACTGTGTCCAATACCCGAACAGTTCTTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 90 bp GATTTCTGGCATCTGATTGGCCCAAATCTTGGTGCGGCCTGCATTTaGATGCAAACAGTTTCCAAGCCAGGACAAGATACAGTGTTTGGT +
Preference number: 5 (lower is better)
Translates to: DFWHLIGPNLGAACI*MQTVSKPGQDTVFG
Trigger: ACCAAACACTGTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp GTGAGAAAGGCAAGGGTACCGATTGTTTCATTGGACATGATGTTATaGAAACGTGCCAGCTGTCCAAACATCTGTAGGCCAGCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VRKARVPIVSLDMML*KRASCPNICRPASF
Trigger: AAAGGAGGCTGGCCTACAGATGTTTGGACAGCTGGCACGTTTCCATAACATCATGTCCAATGAAACAATCGGTACCCTTGCCTTTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp GAACTGTCTGTGCAAAGAGAGTTGGGGAATAGGAACGTCCATCCTTaGGCACAGTGGCACAGAAATTCTCCTCATCCCCAAGATTTAAGT +
Preference number: 5 (lower is better)
Translates to: ELSVQRELGNRNVHP*AQWHRNSPHPQDLS
Trigger: ACTTAAATCTTGGGGATGAGGAGAATTTCTGTGCCACTGTGCCCAAGGATGGACGTTCCTATTCCCCAACTCTCTTTGCACAGACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAGGGCCTGCTCAACATaGCTCATATCAAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKRACST*LISSQS
Trigger: AGACTGGCTTGATATGAGCAATGTTGAGCAGGCCCT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGTGGTGCGGCCTGCATTaGCATGCAAACAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKWCGLH*HANSFQ
Trigger: TTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCA...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGCAGGGCTAGAACTTaGCTGAGCATCCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSRART*LSIPPG
Trigger: GCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGCAGGGCTAGAACTTaGCTGAGCATCCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSRART*LSIPPG
Trigger: GCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS GCA 90 bp GAAAAAGATTTCTGGCATCTGATTGGCCCAAATCTTGGTGCGGCCTaGATTTGCATGCAAACAGTTTCCAAGCCAGGACAAGATACAGTG +
Preference number: 5 (lower is better)
Translates to: EKDFWHLIGPNLGAA*ICMQTVSKPGQDTV
Trigger: CACTGTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATTGCCGCAAACTGTTaGGCATCAGCCAGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHIAANC*ASAREP
Trigger: TGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAAT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAATTGCCGCAAACTGTTaGGCATCAGCCAGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSIAANC*ASAREP
Trigger: TGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAAT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGCTGCTCTTTTTGGATaGCCGCAAACTGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKAALFG*PQTVWH
Trigger: ATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAGC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGACAAGATACAGTGTTaGGTTTCTGGAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKDKIQC*VSGESW
Trigger: CCAGCTCTCTCCAGAAACCAAACACTGTATCTTGTC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAACACCTCTGCTAGTTaGGCCCTCAGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSNTSAS*ALRWGF
Trigger: GAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGGATACCAAGGGATTaGGGGTCTGATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQWIPRD*GSDPGG
Trigger: CCCACCTGGATCAGACCCCAAATCCCTTGGTATCCA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATGGATACCAAGGGATTaGGGGTCTGATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSWIPRD*GSDPGG
Trigger: CCCACCTGGATCAGACCCCAAATCCCTTGGTATCCA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTTAAGGCACCCATCTaGGGGCCAACCAGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHFKAPI*GPTRCC
Trigger: GCAACACCTGGTTGGCCCCAAGATGGGTGCCTTAAA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTAAGGCACCCATCTaGGGGCCAACCAGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQFKAPI*GPTRCC
Trigger: GCAACACCTGGTTGGCCCCAAGATGGGTGCCTTAAA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGACAAGCTGCTGGGGTTaGAAGTCAAATTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKTSCWG*KSNSLK
Trigger: CTTCAGCGAATTTGACTTCAAACCCCAGCAGCTTGT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 90 bp ACATTTGGAAAAAGATTTCTGGCATCTGATTGGCCCAAATCTTGGTaGGGCCTGCATTTGCATGCAAACAGTTTCCAAGCCAGGACAAGA +
Preference number: 5 (lower is better)
Translates to: TFGKRFLASDWPKSW*GLHLHANSFQARTR
Trigger: TCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTTTCCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp CATACATTTGGAAAAAGATTTCTGGCATCTGATTGGCCCAAATCTTaGTGCGGCCTGCATTTGCATGCAAACAGTTTCCAAGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: HTFGKRFLASDWPKS*CGLHLHANSFQART
Trigger: TGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTTTCCAAATGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGAGAGGATCTGGGTTaGCAAAATGGCTGGCATAGC +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSREDLG*QNGWHS
Trigger: GCTATGCCAGCCATTTTGCAAACCCAGATCCTCTCG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCGAGAGGATCTGGGTTaGCAAAATGGCTGGCATAGC +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQREDLG*QNGWHS
Trigger: GCTATGCCAGCCATTTTGCAAACCCAGATCCTCTCG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAACACCTCTGCTAGTTaGGCCCTCAGGTGGGGATTC +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSNTSAS*ALRWGF
Trigger: GAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGTT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGATACCAAGGGATTaGGGGTCTGATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWIPRD*GSDPGG
Trigger: CCCACCTGGATCAGACCCCAAATCCCTTGGTATCCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGGGGCCAACCAGGTGTaGCAGGAAGTAGTTCAACAT +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQGANQV*QEVVQH
Trigger: ATGTTGAACTACTTCCTGCAACACCTGGTTGGCCCC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTTTAAGGCACCCATCTaGGGGCCAACCAGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYFKAPI*GPTRCC
Trigger: GCAACACCTGGTTGGCCCCAAGATGGGTGCCTTAAA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGAATTCGCTGAAGTCCTaGACTTTTAAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKNSLKS*TFKAPI
Trigger: GATGGGTGCCTTAAAAGTCAAGGACTTCAGCGAATT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGATCTGCACTCTGGGGTaGGTTTTGGTTTGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKICTLG*VLVWLV
Trigger: AACTAACCAAACCAAAACCAACCCCAGAGTGCAGAT...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCCTCACCCCCATCAATaGGTAGGATTGCCCTACCAA +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQPHPHQ*VGLPYQ
Trigger: TTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACCTCACCCCCATCAATaGGTAGGATTGCCCTACCAA +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSPHPHQ*VGLPYQ
Trigger: TTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 90 bp CATATTCCCAGGCTTATTTATTTTCTTCAAGACTCGAACTGTCTGTaGAAAGAGAGTTGGGGAATAGGAACGTCCATCCTTGGGCACAGT +
Preference number: 5 (lower is better)
Translates to: HIPRLIYFLQDSNCL*KESWGIGTSILGHS
Trigger: ACTGTGCCCAAGGATGGACGTTCCTATTCCCCAACTCTCTTTGCACAGACAGTTCGAGTCTTGAAGAAAATAAATAAGCCTGGGAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp CAAATCTACCAGTTGCTCATGGATGTTTTGGTCAACATAGATCTCTaGGGTGAGAAGAACTGTTCGGGTATTGGACACAGTGAGGTTTCT +
Preference number: 5 (lower is better)
Translates to: QIYQLLMDVLVNIDL*GEKNCSGIGHSEVS
Trigger: AGAAACCTCACTGTGTCCAATACCCGAACAGTTCTTCTCACCCCAGAGATCTATGTTGACCAAAACATCCATGAGCAACTGGTAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp CATTTGCATGCAAACAGTTTCCAAGCCAGGACAAGATACAGTGTTTaGTTTCTGGAGAGAGCTGGAGTAAGTTCTTCAGCATCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: HLHANSFQARTRYSV*FLERAGVSSSASGR
Trigger: TCTACCAGATGCTGAAGAACTTACTCCAGCTCTCTCCAGAAACCAAACACTGTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp AAGCATCTGAGGCATACATTTGGAAAAAGATTTCTGGCATCTGATTaGCCCAAATCTTGGTGCGGCCTGCATTTGCATGCAAACAGTTTC +
Preference number: 5 (lower is better)
Translates to: KHLRHTFGKRFLASD*PKSWCGLHLHANSF
Trigger: GAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTTTCCAAATGTATGCCTCAGATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 90 bp TGTTACAAGGTTGTAGTTCTGTGGAAACTTCGGCTCCTGCACAGCTaGGATCAAACAGGTTTCTTTGTCCAAACCTCTCATGTGTACATT +
Preference number: 5 (lower is better)
Translates to: CYKVVVLWKLRLLHS*DQTGFFVQTSHVYI
Trigger: AATGTACACATGAGAGGTTTGGACAAAGAAACCTGTTTGATCCCAGCTGTGCAGGAGCCGAAGTTTCCACAGAACTACAACCTTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGGAGTTCATCAGATTGTaGCTTCAGCTGCTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKEFIRL*LQLLFL
Trigger: CAAAAAGAGCAGCTGAAGCAACAATCTGATGAACTC...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGGGCCTGCTCAACATaGCTCATATCAAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSRACST*LISSQS
Trigger: AGACTGGCTTGATATGAGCAATGTTGAGCAGGCCCT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTGGTAATCTCTTCCTaGGCTCTCTGGAAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHLVISS*ALWKQE
Trigger: CTCCTGCTTCCAGAGAGCCAAGGAAGAGATTACCAA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGTTGCTCATGGATGTTTaGGTCAACATAGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKLLMDV*VNIDLW
Trigger: CCAGAGATCTATGTTGACCAAAACATCCATGAGCAA...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCATCAAATCTACCAGTaGCTCATGGATGTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKHQIYQ*LMDVLV
Trigger: GACCAAAACATCCATGAGCAACTGGTAGATTTGATG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGTCTTCTGGTACATTaGCCCATTGGTAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGLLVH*PIGRVL
Trigger: AAGGACCCTACCAATGGGCAAATGTACCAGAAGACC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCTTTTAGTTCTGTGTTaGGCCGGATCTGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLLVLC*AGSGPW
Trigger: CCATGGACCAGATCCGGCCAAACACAGAACTAAAAG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACCTTTTAGTTCTGTGTTaGGCCGGATCTGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHLLVLC*AGSGPW
Trigger: CCATGGACCAGATCCGGCCAAACACAGAACTAAAAG...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp AGCGTTGTAGAAGAAGTCATGTTAATTAAGTGGTTGCCTGGATCTTaGAGTAATAAGCGAGCGAAGAGGGCCTGCTCAACATTGCTCATA +
Preference number: 5 (lower is better)
Translates to: SVVEEVMLIKWLPGS*SNKRAKRACSTLLI
Trigger: TATGAGCAATGTTGAGCAGGCCCTCTTCGCTCGCTTATTACTTCAAGATCCAGGCAACCACTTAATTAACATGACTTCTTCTACAACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp GTCTCCTCACCCCCATCAATTGGTAGGATTGCCCTACCAATCCTCATTAAAAAGCAGCAAAGGGGTTACTaGAGATGTTGTTGTTATTCT +
Preference number: 5 (lower is better)
Translates to: VSSPPSIGRIALPILIKKQQRGY*RCCCYS
Trigger: AGAATAACAACAACATCTCAAGTAACCCCTTTGCTG...CTTTTTAATGAGGATTGGTAGGGCAATCCTACCAATTGATGGGGGTGAGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTGGTAATCTCTTCCTaGGCTCTCTGGAAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLVISS*ALWKQE
Trigger: CTCCTGCTTCCAGAGAGCCAAGGAAGAGATTACCAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGAACTGTTCGGGTATaGGACACAGTGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSRTVRV*DTVRFL
Trigger: CAGAAACCTCACTGTGTCCAATACCCGAACAGTTCT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGGTCTTCTGGTACATTaGCCCATTGGTAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYGLLVH*PIGRVL
Trigger: AAGGACCCTACCAATGGGCAAATGTACCAGAAGACC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGTGCGGCCTGCATTaGCATGCAAACAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWCGLH*HANSFQ
Trigger: TTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTCATCATTCAACTCCTaGAGGGCACAGTATGTGGGA +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQSSFNS*RAQYVG
Trigger: TCCCACATACTGTGCCCTCAAGGAGTTGAATGATGA...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAACTGCTCACGAAGATaGTCAGCAGCAGGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSNCSRR*SAAGLE
Trigger: TTCTAGCCCTGCTGCTGACAATCTTCGTGAGCAGTT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAACTGCTCACGAAGATaGTCAGCAGCAGGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYNCSRR*SAAGLE
Trigger: TTCTAGCCCTGCTGCTGACAATCTTCGTGAGCAGTT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACACAAGCTGCTGGGGTTaGAAGTCAAATTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHTSCWG*KSNSLK
Trigger: CTTCAGCGAATTTGACTTCAAACCCCAGCAGCTTGT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAACAAGCTGCTGGGGTTaGAAGTCAAATTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSTSCWG*KSNSLK
Trigger: CTTCAGCGAATTTGACTTCAAACCCCAGCAGCTTGT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAGGTCTGCAAGAGACTaGATTCTCTCTGCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQRSARD*ILSAKL
Trigger: CAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACCT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGTCTGCAAGAGACTaGATTCTCTCTGCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHRSARD*ILSAKL
Trigger: CAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACCT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCATTCCTCTTCCTGTTGTaGGAGGTCTGCAAGAGACTT +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSFLFLL*EVCKRL
Trigger: AAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGAA...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCTTTTAGTTCTGTGTTaGGCCGGATCTGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYLLVLC*AGSGPW
Trigger: CCATGGACCAGATCCGGCCAAACACAGAACTAAAAG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 90 bp CATCTTCAAAATAGATCTTGTTCATGTACTCACGGGCTCCCTGGATaGCTTCTAACATCAAATCTACCAGTTGCTCATGGATGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: HLQNRSCSCTHGLPG*LLTSNLPVAHGCFG
Trigger: ACCAAAACATCCATGAGCAACTGGTAGATTTGATGTTAGAAGCCATCCAGGGAGCCCGTGAGTACATGAACAAGATCTATTTTGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCTTCAGCTGCTCTTTTaGGATTGCCGCAAACTGTTT +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQLQLLF*DCRKLF
Trigger: AAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTTCAGCTGCTCTTTTaGGATTGCCGCAAACTGTTT +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSLQLLF*DCRKLF
Trigger: AAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTGGGAGTTCATCAGATaGTTGCTTCAGCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHWEFIR*LLQLLF
Trigger: AAAGAGCAGCTGAAGCAACAATCTGATGAACTCCCA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAAGCTGGGATCACTGTaGTCCAGAGTAATAAGGAAG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHKLGSL*SRVIRK
Trigger: CTTCCTTATTACTCTGGACAACAGTGATCCCAGCTT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAGGTTCTCTGGAACTTaGGTAATCTCTTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSRFSGT*VISSLA
Trigger: AGCCAAGGAAGAGATTACCAAAGTTCCAGAGAACCT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGAACTGTTCGGGTATaGGACACAGTGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSRTVRV*DTVRFL
Trigger: CAGAAACCTCACTGTGTCCAATACCCGAACAGTTCT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCATCATTCAACTCCTaGAGGGCACAGTATGTGGGA +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSSFNS*RAQYVG
Trigger: TCCCACATACTGTGCCCTCAAGGAGTTGAATGATGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAATTCGCTGAAGTCCTaGACTTTTAAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQNSLKS*TFKAPI
Trigger: GATGGGTGCCTTAAAAGTCAAGGACTTCAGCGAATT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGGTCTGCAAGAGACTaGATTCTCTCTGCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYRSARD*ILSAKL
Trigger: CAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTCCTCTTCCTGTTGTaGGAGGTCTGCAAGAGACTT +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSFLFLL*EVCKRL
Trigger: AAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAAGTTGCTCCTTTTGTaGTTTCCTCTCTGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQKLLLL*FPLCKP
Trigger: TGGCTTGCAGAGAGGAAACAACAAAAGGAGCAACTT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAAAGTTGCTCCTTTTGTaGTTTCCTCTCTGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSKLLLL*FPLCKP
Trigger: TGGCTTGCAGAGAGGAAACAACAAAAGGAGCAACTT...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATCTGCACTCTGGGGTaGGTTTTGGTTTGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHICTLG*VLVWLV
Trigger: AACTAACCAAACCAAAACCAACCCCAGAGTGCAGAT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp GGATCACTGTTGTCCAGAGTAATAAGGAAGATCCTTTGGATCATGTaGTTGATGTTGAGTTGCTCACATATTTCCTGCTGTGATCGGAAT +
Preference number: 5 (lower is better)
Translates to: GSLLSRVIRKILWIM*LMLSCSHISCCDRN
Trigger: ATTCCGATCACAGCAGGAAATATGTGAGCAACTCAACATCAATCACATGATCCAAAGGATCTTCCTTATTACTCTGGACAACAGTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 90 bp GGATTCTTCATTCTTTCTATGCTTCCAGTGAAAATGGTGATAAAGTaGAGGACATGCTCCAGGGAATCTGCTGATGTCTCCAAAATGTCA +
Preference number: 5 (lower is better)
Translates to: GFFILSMLPVKMVIK*RTCSRESADVSKMS
Trigger: TGACATTTTGGAGACATCAGCAGATTCCCTGGAGCATGTCCTTCACTTTATCACCATTTTCACTGGAAGCATAGAAAGAATGAAGAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp TCTGGAGTCAGACTATCCCATTCACCTCGATCCTTCTCAATTTGCTaGATCTTTATCTTGCTCAAATACTGTATGGCTTCATCCAAAAGG +
Preference number: 5 (lower is better)
Translates to: SGVRLSHSPRSFSIC*IFILLKYCMASSKR
Trigger: CCTTTTGGATGAAGCCATACAGTATTTGAGCAAGATAAAGATTCAGCAAATTGAGAAGGATCGAGGTGAATGGGATAGTCTGACTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGGGAGTTCATCAGATaGTTGCTTCAGCTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSWEFIR*LLQLLF
Trigger: AAAGAGCAGCTGAAGCAACAATCTGATGAACTCCCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAAGCTGGGATCACTGTaGTCCAGAGTAATAAGGAAG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSKLGSL*SRVIRK
Trigger: CTTCCTTATTACTCTGGACAACAGTGATCCCAGCTT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCATCAAATCTACCAGTaGCTCATGGATGTTTTGGTC +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQHQIYQ*LMDVLV
Trigger: GACCAAAACATCCATGAGCAACTGGTAGATTTGATG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGATGTCCACAAAAACCTaGATTAGAGCCTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQMSTKT*IRASAS
Trigger: ACTTGCAGAGGCTCTAATCAAGGTTTTTGTGGACAT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTGCACAAAGAGTGACTaGATCTCTGATGTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHCTKSD*ISDVRK
Trigger: CTTTCTCACATCAGAGATCAAGTCACTCTTTGTGCA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGTTAAAGGGATCTGTTaGGTCACTGAGCAAATGTCT +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSVKGIC*VTEQMS
Trigger: AGACATTTGCTCAGTGACCAAACAGATCCCTTTAAC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGGTTAAAGGGATCTGTTaGGTCACTGAGCAAATGTCT +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQVKGIC*VTEQMS
Trigger: AGACATTTGCTCAGTGACCAAACAGATCCCTTTAAC...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGGGGTTGGTTTTGGTTaGGTTAGTTCACAGTATCTA +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSGVGFG*VSSQYL
Trigger: TAGATACTGTGAACTAACCAAACCAAAACCAACCCC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGGGGTTGGTTTTGGTTaGGTTAGTTCACAGTATCTA +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHGVGFG*VSSQYL
Trigger: TAGATACTGTGAACTAACCAAACCAAAACCAACCCC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATATCTGCACTCTGGGGTaGGTTTTGGTTTGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYICTLG*VLVWLV
Trigger: AACTAACCAAACCAAAACCAACCCCAGAGTGCAGAT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGAAACCACAAACAATaGTTTATCTGCACTCTGGGG +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHRNHKQ*FICTLG
Trigger: CCCCAGAGTGCAGATAAACAATTGTTTGTGGTTTCT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATCAATTGGTAGGATaGCCCTACCAATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSHQLVG*PYQSSL
Trigger: TAATGAGGATTGGTAGGGCAATCCTACCAATTGATG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCATCAATTGGTAGGATaGCCCTACCAATCCTCATTA +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQHQLVG*PYQSSL
Trigger: TAATGAGGATTGGTAGGGCAATCCTACCAATTGATG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGCAGCAAAGGGGTTACTaGAGATGTTGTTGTTATTCT +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQQQRGY*RCCCYS
Trigger: AGAATAACAACAACATCTCAAGTAACCCCTTTGCTG...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGAGTTCATCAGATTGTaGCTTCAGCTGCTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYEFIRL*LQLLFL
Trigger: CAAAAAGAGCAGCTGAAGCAACAATCTGATGAACTC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTTGCTCATGGATGTTTaGGTCAACATAGATCTCTGG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSLLMDV*VNIDLW
Trigger: CCAGAGATCTATGTTGACCAAAACATCCATGAGCAA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACATCAAACAGGTTTCTTaGTCCAAACCTCTCATGTGT +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHIKQVS*SKPLMC
Trigger: ACACATGAGAGGTTTGGACAAAGAAACCTGTTTGAT...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGATCAAACAGGTTTCTTaGTCCAAACCTCTCATGTGT +
Preference number: 5 (lower is better)
Translates to: QTIVYLHSGVGFGLVSSQIKQVS*SKPLMC
Trigger: ACACATGAGAGGTTTGGACAAAGAAACCTGTTTGAT...CTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATATGTCCACAAAAACCTaGATTAGAGCCTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYMSTKT*IRASAS
Trigger: ACTTGCAGAGGCTCTAATCAAGGTTTTTGTGGACAT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTGCACAAAGAGTGACTaGATCTCTGATGTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYCTKSD*ISDVRK
Trigger: CTTTCTCACATCAGAGATCAAGTCACTCTTTGTGCA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTGCACAAAGAGTGACTaGATCTCTGATGTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSCTKSD*ISDVRK
Trigger: CTTTCTCACATCAGAGATCAAGTCACTCTTTGTGCA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTAGAAACCACAAACAATaGTTTATCTGCACTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSRNHKQ*FICTLG
Trigger: CCCCAGAGTGCAGATAAACAATTGTTTGTGGTTTCT...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATAGAAACCACAAACAATaGTTTATCTGCACTCTGGGG +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYRNHKQ*FICTLG
Trigger: CCCCAGAGTGCAGATAAACAATTGTTTGTGGTTTCT...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGAACATCCTACTAGATaGGGTTTGGAAGATAAATGC +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSEHPTR*GLEDKC
Trigger: GCATTTATCTTCCAAACCCAATCTAGTAGGATGTTC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACTCGATCCTTCTCAATTaGCTGAATCTTTATCTTGCT +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHSILLN*LNLYLA
Trigger: AGCAAGATAAAGATTCAGCAAATTGAGAAGGATCGA...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACGTACCGATTGTTTCATaGGACATGATGTTATGGAAA +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHVPIVS*DMMLWK
Trigger: TTTCCATAACATCATGTCCAATGAAACAATCGGTAC...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCAGTACCGATTGTTTCATaGGACATGATGTTATGGAAA +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSVPIVS*DMMLWK
Trigger: TTTCCATAACATCATGTCCAATGAAACAATCGGTAC...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCTATTCAAGTaGCTCCTTTTGTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PQTIVYLHSGVGFGLVSSQYLFK*LLLLFP
Trigger: AGGAAACAACAAAAGGAGCAACTTGAATAGATACTG...TGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp CACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACCAGTATCTATTCAAGTaGCTCCTTTTGTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HKQLFICTLGLVLVWLVHQYLFK*LLLLFP
Trigger: AGGAAACAACAAAAGGAGCAACTTGAATAGATACTG...GTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTGAACATCCTACTAGATaGGGTTTGGAAGATAAATGC +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSEHPTR*GLEDKC
Trigger: GCATTTATCTTCCAAACCCAATCTAGTAGGATGTTC...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS-3UTR CAA 90 bp AAACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTTCGATCCTTCTCAATTaGCTGAATCTTTATCTTGCT +
Preference number: 5 (lower is better)
Translates to: KQLFICTLGLVLVWLVHSSILLN*LNLYLA
Trigger: AGCAAGATAAAGATTCAGCAAATTGAGAAGGATCGA...ACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATTCGATCCTTCTCAATTaGCTGAATCTTTATCTTGCT +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYSILLN*LNLYLA
Trigger: AGCAAGATAAAGATTCAGCAAATTGAGAAGGATCGA...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATGTACCGATTGTTTCATaGGACATGATGTTATGGAAA +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYVPIVS*DMMLWK
Trigger: TTTCCATAACATCATGTCCAATGAAACAATCGGTAC...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS-3UTR CAA 90 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTGGTTAGTTCACAGTATCAGTATCTATTCAAGTaGCTCCTTTTGTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TIVYLHSGVGFGLVSSQYQYLFK*LLLLFP
Trigger: AGGAAACAACAAAAGGAGCAACTTGAATAGATACTG...ATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 90 bp TTTCTCTCTAAAGACATAATTTCCTTCTTCCGGCAATGTGTTGACTaGGTAGTTTTGAAAAATGCTCTGCATCAATTCAGGTATCTTGAG +
Preference number: 5 (lower is better)
Translates to: FLSKDIISFFRQCVD*VVLKNALHQFRYLE
Trigger: CTCAAGATACCTGAATTGATGCAGAGCATTTTTCAAAACTACTCAGTCAACACATTGCCGGAAGAAGGAAATTATGTCTTTAGAGAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545354.1
CDS CAA 72 bp CTGCTCACGAAGATTGTCAGCAGCAGGGCTAGAACTTaGCTGAGCATCCCGCCAGGCAACCTGCAGCCGATG +
Preference number: 6 (lower is better)
Translates to: LLTKIVSSRART*LSIPPGNLQPM
Trigger: CATCGGCTGCAGGTTGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCTGCTGACAATCTTCGTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 72 bp TCACGAAGATTGTCAGCAGCAGGGCTAGAACTTTGCTaGGCATCCCGCCAGGCAACCTGCAGCCGATGCAGA +
Preference number: 6 (lower is better)
Translates to: SRRLSAAGLELC*ASRQATCSRCR
Trigger: TCTGCATCGGCTGCAGGTTGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCTGCTGACAATCTTCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 72 bp CGGTGGAACACACTGGATACCAAGGGATTTGGGGTCTaGTCCAGGTGGGGCATCACTGCTTCCAACACCTCT +
Preference number: 6 (lower is better)
Translates to: RWNTLDTKGFGV*SRWGITASNTS
Trigger: AGAGGTGTTGGAAGCAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp CACGTTTCCGGTGGAACACACTGGATACCAAGGGATTaGGGGTCTGATCCAGGTGGGGCATCACTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: HVSGGTHWIPRD*GSDPGGASLLP
Trigger: TGGAAGCAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp TGCAGAACACACGTTTCCGGTGGAACACACTGGATACCAAGGGATTaGGGGTCTGATCCAGGTGGGGCATCACTGCTTCCAACACCTCTG +
Preference number: 6 (lower is better)
Translates to: CRTHVSGGTHWIPRD*GSDPGGASLLPTPL
Trigger: CAGAGGTGTTGGAAGCAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 72 bp GTGAGGAGCCGAGAGGATCTGGGTTTGCAAAATGGCTaGCATAGCTTCAGGAGAGCAGCACCCAGATTCAGA +
Preference number: 6 (lower is better)
Translates to: VRSREDLGLQNG*HSFRRAAPRFR
Trigger: TCTGAATCTGGGTGCTGCTCTCCTGAAGCTATGCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp ACGTTTCCGGTGGAACACACTGGATACCAAGGGATTTaGGGTCTGATCCAGGTGGGGCATCACTGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: TFPVEHTGYQGI*GLIQVGHHCFQ
Trigger: TTGGAAGCAGTGATGCCCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp TCGTTCAAACTGCTCACGAAGATTGTCAGCAGCAGGGCTAGAACTTaGCTGAGCATCCCGCCAGGCAACCTGCAGCCGATGCAGATTTTG +
Preference number: 6 (lower is better)
Translates to: SFKLLTKIVSSRART*LSIPPGNLQPMQIL
Trigger: CAAAATCTGCATCGGCTGCAGGTTGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCTGCTGACAATCTTCGTGAGCAGTTTGAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 72 bp GAAAGTTGCAGAACACACGTTTCCGGTGGAACACACTaGATACCAAGGGATTTGGGGTCTGATCCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: ESCRTHVSGGTH*IPRDLGSDPGG
Trigger: CCCACCTGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTTCTGCAACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp GTGGGATTAAAGGTGAGGAGCCGAGAGGATCTGGGTTaGCAAAATGGCTGGCATAGCTTCAGGAGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VGLKVRSREDLG*QNGWHSFRRAA
Trigger: TGCTGCTCTCCTGAAGCTATGCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCCTCACCTTTAATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 90 bp GCACAGTATGTGGGATTAAAGGTGAGGAGCCGAGAGGATCTGGGTTaGCAAAATGGCTGGCATAGCTTCAGGAGAGCAGCACCCAGATTC +
Preference number: 6 (lower is better)
Translates to: AQYVGLKVRSREDLG*QNGWHSFRRAAPRF
Trigger: GAATCTGGGTGCTGCTCTCCTGAAGCTATGCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCCTCACCTTTAATCCCACATACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp CTCAGCCACAGAGTAATCGAATTCATCCAGGCTCTCTaGCACGCTATTATCCGAGTCATCTGGGCTAGCTGG +
Preference number: 6 (lower is better)
Translates to: LSHRVIEFIQAL*HAIIRVIWASW
Trigger: CCAGCTAGCCCAGATGACTCGGATAATAGCGTGTCAGAGAGCCTGGATGAATTCGATTACTCTGTGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp GGTGATAAAGTGAAGGACATGCTCCAGGGAATCTGCTaGTGTCTCCAAAATGTCATCGGCAAAGCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: GDKVKDMLQGIC*CLQNVIGKAAE
Trigger: CTCCGCCGCTTTGCCGATGACATTTTGGAGACATCAGCAGATTCCCTGGAGCATGTCCTTCACTTTATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 72 bp CAACCAGGTGTTGCAGGAAGTAGTTCAACATGGAGATaGTGCGCTCAGCCAGGAAGGGATGCACAAAGAGTG +
Preference number: 6 (lower is better)
Translates to: QPGVAGSSSTWR*CAQPGRDAQRV
Trigger: CACTCTTTGTGCATCCCTTCCTGGCTGAGCGCATCATCTCCATGTTGAACTACTTCCTGCAACACCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 72 bp AGGTTAGCTCTATTGGCTGTGAGCCCTCATTGCCTATaGCCAGTTGAACCAGTAGAACAGCCATGGACACCT +
Preference number: 6 (lower is better)
Translates to: RLALLAVSPHCL*PVEPVEQPWTP
Trigger: AGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGAGCTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 72 bp TGCAATGGTGGATCTATCCACAGTGACTCTGGAAGATaGCAGCACCACAGGGTCACACATCAGTGTGCTCAT +
Preference number: 6 (lower is better)
Translates to: CNGGSIHSDSGR*QHHRVTHQCAH
Trigger: ATGAGCACACTGATGTGTGACCCTGTGGTGCTGCCATCTTCCAGAGTCACTGTGGATAGATCCACCATTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp AGGTGGGGCATCACTGCTTCCAACACCTCTGCTAGTTaGGCCCTCAGGTGGGGATTCTTCATTCTTTCTATG +
Preference number: 6 (lower is better)
Translates to: RWGITASNTSAS*ALRWGFFILSM
Trigger: CATAGAAAGAATGAAGAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGTTGGAAGCAGTGATGCCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp TGGGCTAGCTGGGAGTTCATCAGATTGTTGCTTCAGCTGCTCTTTTaGGATTGCCGCAAACTGTTTGGCATCAGCCAGGGAGCCAAAAAG +
Preference number: 6 (lower is better)
Translates to: WASWEFIRLLLQLLF*DCRKLFGISQGAKK
Trigger: CTTTTTGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAGCAACAATCTGATGAACTCCCAGCTAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp TCTATTGGCTGTGAGCCCTCATTGCCTATGGCCAGTTaGACCAGTAGAACAGCCATGGACACCTGCAAGTTT +
Preference number: 6 (lower is better)
Translates to: SIGCEPSLPMAS*TSRTAMDTCKF
Trigger: AAACTTGCAGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS GCA 72 bp ACTGTTCGGGTATTGGACACAGTGAGGTTTCTGCACTaGACTGCAAAGGGTAGCAGGTTCTCTGGAACTTTG +
Preference number: 6 (lower is better)
Translates to: TVRVLDTVRFLH*TAKGSRFSGTL
Trigger: CAAAGTTCCAGAGAACCTGCTACCCTTTGCAGTGCAGTGCAGAAACCTCACTGTGTCCAATACCCGAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 72 bp AAGGAAAGGTTAGCTCTATTGGCTGTGAGCCCTCATTaGCTATGGCCAGTTGAACCAGTAGAACAGCCATGG +
Preference number: 6 (lower is better)
Translates to: KERLALLAVSPH*LWPVEPVEQPW
Trigger: CCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGAGCTAACCTTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp GCATCTGATTGGCCCAAATCTTGGTGCGGCCTGCATTaGCATGCAAACAGTTTCCAAGCCAGGACAAGATAC +
Preference number: 6 (lower is better)
Translates to: ASDWPKSWCGLH*HANSFQARTRY
Trigger: GTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 90 bp AAGCCAAAGAGCTGTAGCCATCTGGCAAAGGAAAGGTTAGCTCTATaGGCTGTGAGCCCTCATTGCCTATGGCCAGTTGAACCAGTAGAA +
Preference number: 6 (lower is better)
Translates to: KPKSCSHLAKERLAL*AVSPHCLWPVEPVE
Trigger: TTCTACTGGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCAATAGAGCTAACCTTTCCTTTGCCAGATGGCTACAGCTCTTTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 72 bp CCCGCCAGGCAACCTGCAGCCGATGCAGATTTTGGTTaGTTTTTACCATCTGATCATGCAACCTGTGAAATC +
Preference number: 6 (lower is better)
Translates to: PARQPAADADFG*FLPSDHATCEI
Trigger: GATTTCACAGGTTGCATGATCAGATGGTAAAAATCAACCAAAATCTGCATCGGCTGCAGGTTGCCTGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp ACCTTGATTAGAGCCTCTGCAAGTTGGGGTGCATACTaGAAGTTGCAGAACACACGTTTCCGGTGGAACACA +
Preference number: 6 (lower is better)
Translates to: TLIRASASWGAY*KLQNTRFRWNT
Trigger: TGTGTTCCACCGGAAACGTGTGTTCTGCAACTTTCAGTATGCACCCCAACTTGCAGAGGCTCTAATCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS GCA 72 bp GGGCTAGCTGGGAGTTCATCAGATTGTTGCTTCAGCTaGTCTTTTTGGATTGCCGCAAACTGTTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: GLAGSSSDCCFS*SFWIAANCLAS
Trigger: TGATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAGCAACAATCTGATGAACTCCCAGCTAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 72 bp CATCTGATTGGCCCAAATCTTGGTGCGGCCTGCATTTaGATGCAAACAGTTTCCAAGCCAGGACAAGATACA +
Preference number: 6 (lower is better)
Translates to: HLIGPNLGAACI*MQTVSKPGQDT
Trigger: TGTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp CAGAGCAAGGTTCTCTGTTACAAGGTTGTAGTTCTGTaGAAACTTCGGCTCCTGCACAGCTGGGATCAAACA +
Preference number: 6 (lower is better)
Translates to: QSKVLCYKVVVL*KLRLLHSWDQT
Trigger: TGTTTGATCCCAGCTGTGCAGGAGCCGAAGTTTCCACAGAACTACAACCTTGTAACAGAGAACCTTGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp GTTCATCAGATTGTTGCTTCAGCTGCTCTTTTTGGATaGCCGCAAACTGTTTGGCATCAGCCAGGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: VHQIVASAALFG*PQTVWHQPGSQ
Trigger: TTGGCTCCCTGGCTGATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAGCAACAATCTGATGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp TGGGAGTTCATCAGATTGTTGCTTCAGCTGCTCTTTTaGGATTGCCGCAAACTGTTTGGCATCAGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: WEFIRLLLQLLF*DCRKLFGISQG
Trigger: TCCCTGGCTGATGCCAAACAGTTTGCGGCAATCCAAAAAGAGCAGCTGAAGCAACAATCTGATGAACTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 90 bp AGATTTCTGGCATCTGATTGGCCCAAATCTTGGTGCGGCCTGCATTaGCATGCAAACAGTTTCCAAGCCAGGACAAGATACAGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: RFLASDWPKSWCGLH*HANSFQARTRYSVW
Trigger: CCAAACACTGTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 90 bp ATCCAGGAACTCATCACAGGCATCTGCATAGGTTTCCTCTTCCTGTaGTTGGAGGTCTGCAAGAGACTTGATTCTCTCTGCCAAGTTGCT +
Preference number: 6 (lower is better)
Translates to: IQELITGICIGFLFL*LEVCKRLDSLCQVA
Trigger: AGCAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGAAACCTATGCAGATGCCTGTGATGAGTTCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS GCA 72 bp AAAAGATTTCTGGCATCTGATTGGCCCAAATCTTGGTaGGGCCTGCATTTGCATGCAAACAGTTTCCAAGCC +
Preference number: 6 (lower is better)
Translates to: KRFLASDWPKSW*GLHLHANSFQA
Trigger: GGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS GCA 72 bp TTCAACATGGAGATGATGCGCTCAGCCAGGAAGGGATaGACAAAGAGTGACTTGATCTCTGATGTGAGAAAG +
Preference number: 6 (lower is better)
Translates to: FNMEMMRSARKG*TKSDLISDVRK
Trigger: CTTTCTCACATCAGAGATCAAGTCACTCTTTGTGCATCCCTTCCTGGCTGAGCGCATCATCTCCATGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CCA 72 bp GTTGTAGTTCTGTGGAAACTTCGGCTCCTGCACAGCTaGGATCAAACAGGTTTCTTTGTCCAAACCTCTCAT +
Preference number: 6 (lower is better)
Translates to: VVVLWKLRLLHS*DQTGFFVQTSH
Trigger: ATGAGAGGTTTGGACAAAGAAACCTGTTTGATCCCAGCTGTGCAGGAGCCGAAGTTTCCACAGAACTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp ACTGCTTCCAACACCTCTGCTAGTTTGGCCCTCAGGTaGGGATTCTTCATTCTTTCTATGCTTCCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: TASNTSASLALR*GFFILSMLPVK
Trigger: TTTCACTGGAAGCATAGAAAGAATGAAGAATCCCCACCTGAGGGCCAAACTAGCAGAGGTGTTGGAAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp ACTCAGAATTACTCCCAGCAAGGTCTTCTGGTACATTaGCCCATTGGTAGGGTCCTTGGGCTGAATGTATTC +
Preference number: 6 (lower is better)
Translates to: TQNYSQQGLLVH*PIGRVLGLNVF
Trigger: GAATACATTCAGCCCAAGGACCCTACCAATGGGCAAATGTACCAGAAGACCTTGCTGGGAGTAATTCTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp ATCACAGGCATCTGCATAGGTTTCCTCTTCCTGTTGTaGGAGGTCTGCAAGAGACTTGATTCTCTCTGCCAA +
Preference number: 6 (lower is better)
Translates to: ITGICIGFLFLL*EVCKRLDSLCQ
Trigger: TTGGCAGAGAGAATCAAGTCTCTTGCAGACCTCCAACAACAGGAAGAGGAAACCTATGCAGATGCCTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp GCAGGAGATACTCAGAATTACTCCCAGCAAGGTCTTCTGGTACATTaGCCCATTGGTAGGGTCCTTGGGCTGAATGTATTCTACAAAAAC +
Preference number: 6 (lower is better)
Translates to: AGDTQNYSQQGLLVH*PIGRVLGLNVFYKN
Trigger: GTTTTTGTAGAATACATTCAGCCCAAGGACCCTACCAATGGGCAAATGTACCAGAAGACCTTGCTGGGAGTAATTCTGAGTATCTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp AGCCAGGGAGCCAAAAAGAGCAGCAAAGGGGTTACTTaGGATGTTGTTGTTATTCTCCTGGTCTGTCATTTC +
Preference number: 6 (lower is better)
Translates to: SQGAKKSSKGVT*DVVVILLVCHF
Trigger: GAAATGACAGACCAGGAGAATAACAACAACATCTCAAGTAACCCCTTTGCTGCTCTTTTTGGCTCCCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp CAGTTGCTCATGGATGTTTTGGTCAACATAGATCTCTaGGGTGAGAAGAACTGTTCGGGTATTGGACACAGT +
Preference number: 6 (lower is better)
Translates to: QLLMDVLVNIDL*GEKNCSGIGHS
Trigger: ACTGTGTCCAATACCCGAACAGTTCTTCTCACCCCAGAGATCTATGTTGACCAAAACATCCATGAGCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp GGAAAAAGATTTCTGGCATCTGATTGGCCCAAATCTTaGTGCGGCCTGCATTTGCATGCAAACAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: GKRFLASDWPKS*CGLHLHANSFQ
Trigger: TTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp AGGCATACATTTGGAAAAAGATTTCTGGCATCTGATTaGCCCAAATCTTGGTGCGGCCTGCATTTGCATGCA +
Preference number: 6 (lower is better)
Translates to: RHTFGKRFLASD*PKSWCGLHLHA
Trigger: TGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTTTTCCAAATGTATGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp CATTGCCTATGGCCAGTTGAACCAGTAGAACAGCCATaGACACCTGCAAGTTTAGGCAGTTTTGTAGCATTT +
Preference number: 6 (lower is better)
Translates to: HCLWPVEPVEQP*TPASLGSFVAF
Trigger: AAATGCTACAAAACTGCCTAAACTTGCAGGTGTCCATGGCTGTTCTACTGGTTCAACTGGCCATAGGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp CAGCCAGGGAGCCAAAAAGAGCAGCAAAGGGGTTACTaGAGATGTTGTTGTTATTCTCCTGGTCTGTCATTT +
Preference number: 6 (lower is better)
Translates to: QPGSQKEQQRGY*RCCCYSPGLSF
Trigger: AAATGACAGACCAGGAGAATAACAACAACATCTCAAGTAACCCCTTTGCTGCTCTTTTTGGCTCCCTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp TGCAAACAGTTTCCAAGCCAGGACAAGATACAGTGTTaGGTTTCTGGAGAGAGCTGGAGTAAGTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: CKQFPSQDKIQC*VSGESWSKFFS
Trigger: GCTGAAGAACTTACTCCAGCTCTCTCCAGAAACCAAACACTGTATCTTGTCCTGGCTTGGAAACTGTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp TCTGATGTGAGAAAGGCAAGGGTACCGATTGTTTCATaGGACATGATGTTATGGAAACGTGCCAGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: SDVRKARVPIVS*DMMLWKRASCP
Trigger: TGGACAGCTGGCACGTTTCCATAACATCATGTCCAATGAAACAATCGGTACCCTTGCCTTTCTCACATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp GACTTGATCTCTGATGTGAGAAAGGCAAGGGTACCGATTGTTTCATaGGACATGATGTTATGGAAACGTGCCAGCTGTCCAAACATCTGT +
Preference number: 6 (lower is better)
Translates to: DLISDVRKARVPIVS*DMMLWKRASCPNIC
Trigger: ACAGATGTTTGGACAGCTGGCACGTTTCCATAACATCATGTCCAATGAAACAATCGGTACCCTTGCCTTTCTCACATCAGAGATCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS TCA 72 bp AGGGCCTGCTCAACATTGCTCATATCAAGCCAGTCTTaGTCTTCTAGCTCTACTGCCATTTCTTCCAAATAC +
Preference number: 6 (lower is better)
Translates to: RACSTLLISSQS*SSSSTAISSKY
Trigger: GTATTTGGAAGAAATGGCAGTAGAGCTAGAAGATCAAGACTGGCTTGATATGAGCAATGTTGAGCAGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp GAAGAAGTCATGTTAATTAAGTGGTTGCCTGGATCTTaGAGTAATAAGCGAGCGAAGAGGGCCTGCTCAACA +
Preference number: 6 (lower is better)
Translates to: EEVMLIKWLPGS*SNKRAKRACST
Trigger: TGTTGAGCAGGCCCTCTTCGCTCGCTTATTACTTCAAGATCCAGGCAACCACTTAATTAACATGACTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp AATAGATCTTGTTCATGTACTCACGGGCTCCCTGGATaGCTTCTAACATCAAATCTACCAGTTGCTCATGGA +
Preference number: 6 (lower is better)
Translates to: NRSCSCTHGLPG*LLTSNLPVAHG
Trigger: TCCATGAGCAACTGGTAGATTTGATGTTAGAAGCCATCCAGGGAGCCCGTGAGTACATGAACAAGATCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431736.6
CDS CAA 72 bp TGGAGGTCTGCAAGAGACTTGATTCTCTCTGCCAAGTaGCTGAAAGCCATAATCATATTCCCAGGCTTATTT +
Preference number: 6 (lower is better)
Translates to: WRSARDLILSAK*LKAIIIFPGLF
Trigger: AAATAAGCCTGGGAATATGATTATGGCTTTCAGCAACTTGGCAGAGAGAATCAAGTCTCTTGCAGACCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp GGCTTCTGGAGTCAGACTATCCCATTCACCTCGATCCTTCTCAATTaGCTGAATCTTTATCTTGCTCAAATACTGTATGGCTTCATCCAA +
Preference number: 6 (lower is better)
Translates to: GFWSQTIPFTSILLN*LNLYLAQILYGFIQ
Trigger: TTGGATGAAGCCATACAGTATTTGAGCAAGATAAAGATTCAGCAAATTGAGAAGGATCGAGGTGAATGGGATAGTCTGACTCCAGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp TTTCAAGCTGGGATCACTGTTGTCCAGAGTAATAAGGAAGATCCTTaGGATCATGTGATTGATGTTGAGTTGCTCACATATTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: FQAGITVVQSNKEDP*DHVIDVELLTYFLL
Trigger: CAGCAGGAAATATGTGAGCAACTCAACATCAATCACATGATCCAAAGGATCTTCCTTATTACTCTGGACAACAGTGATCCCAGCTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS TCA 72 bp TTCTGGTACATTTGCCCATTGGTAGGGTCCTTGGGCTaGATGTATTCTACAAAAACCTTTGCCATATCTTTT +
Preference number: 6 (lower is better)
Translates to: FWYICPLVGSLG*MYSTKTFAISF
Trigger: AAAAGATATGGCAAAGGTTTTTGTAGAATACATTCAGCCCAAGGACCCTACCAATGGGCAAATGTACCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp GGGATCACTGTTGTCCAGAGTAATAAGGAAGATCCTTaGGATCATGTGATTGATGTTGAGTTGCTCACATAT +
Preference number: 6 (lower is better)
Translates to: GITVVQSNKEDP*DHVIDVELLTY
Trigger: ATATGTGAGCAACTCAACATCAATCACATGATCCAAAGGATCTTCCTTATTACTCTGGACAACAGTGATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CAA 72 bp TTGGTTAGTTCACAGTATCTATTCAAGTTGCTCCTTTaGTTGTTTCCTCTCTGCAAGCCACCGTTGGATTTT +
Preference number: 6 (lower is better)
Translates to: LVSSQYLFKLLL*LFPLCKPPLDF
Trigger: AAAATCCAACGGTGGCTTGCAGAGAGGAAACAACAAAAGGAGCAACTTGAATAGATACTGTGAACTAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 90 bp GAGAGAAACCACAAACAATTGTTTATCTGCACTCTGGGGTTGGTTTaGGTTTGGTTAGTTCACAGTATCTATTCAAGTTGCTCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: ERNHKQLFICTLGLV*VWLVHSIYSSCSFC
Trigger: ACAAAAGGAGCAACTTGAATAGATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGTTTGTGGTTTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252108.8
ENST00000431736.6
CDS CCA 72 bp CAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTTaGTTAGTTCACAGTATCTATTCAAGTTGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: QLFICTLGLVLV*LVHSIYSSCSF
Trigger: AAAGGAGCAACTTGAATAGATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1
CDS CAA 72 bp ACAATTGTTTATCTGCACTCTGGGGTTGGTTTTGGTTaGGTTAGTTCACAGTATCTATTCAAGTTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: TIVYLHSGVGFG*VSSQYLFKLLL
Trigger: AAGGAGCAACTTGAATAGATACTGTGAACTAACCAAACCAAAACCAACCCCAGAGTGCAGATAAACAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252108.8
ENST00000431736.6
ENST00000545354.1