RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE3A (Homo sapiens)

Ensembl gene IDs: ENSG00000114062

Ensembl transcript IDs: ENST00000428984.6, ENST00000438097.6, ENST00000566215.5, ENST00000625681.2, ENST00000625778.3, ENST00000626068.2, ENST00000626793.2, ENST00000627018.1, ENST00000628267.2, ENST00000628733.2, ENST00000628890.1, ENST00000629252.2, ENST00000629886.2, ENST00000630424.2, ENST00000630607.2, ENST00000630907.2, ENST00000635914.1, ENST00000636667.1, ENST00000637886.1, ENST00000638011.1, ENST00000638155.1, ENST00000648336.2, ENST00000649550.1, ENST00000650110.1, ENST00000675000.1, ENST00000675038.1, ENST00000675177.1, ENST00000675593.1, ENST00000676452.1

Found 1101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGTTTGCATGCCTTCTCACTGCAATCCATCAGTAGCTGCCACTTaGACCAGTCTTAGCAGGGGATGGGGAAGCCTATGTCTTTCAGAA +
Preference number: 1 (lower is better)
Translates to: RVCMPSHCNPSVAAT*TSLSRGWGSLCLSE
Trigger: TTCTGAAAGACATAGGCTTCCCCATCCCCTGCTAAGACTGGTTCAAGTGGCAGCTACTGATGGATTGCAGTGAGAAGGCATGCAAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR GCA 90 bp GTGACAGGGATTGGTTCCAGGACCACGTGTGTATACCAAAATCCATaGACGCTCAAGTTCTGCAGTTGGCCCTGTGAAACTGGCATGTAT +
Preference number: 1 (lower is better)
Translates to: VTGIGSRTTCVYQNP*TLKFCSWPCETGMY
Trigger: ATACATGCCAGTTTCACAGGGCCAACTGCAGAACTTGAGCGTGCATGGATTTTGGTATACACACGTGGTCCTGGAACCAATCCCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR GCA 90 bp ATCCCAGTGACTCCTCACTGTTCAACTAAGAAATGTACCCCATTATaGTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTTGATG +
Preference number: 1 (lower is better)
Translates to: IPVTPHCSTKKCTPL*CATTEALEALWGLM
Trigger: CATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTTCTTAGTTGAACAGTGAGGAGTCACTGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CCA 90 bp ACCACGTGTGTATACCAAAATCCATGCACGCTCAAGTTCTGCAGTTaGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATAT +
Preference number: 1 (lower is better)
Translates to: TTCVYQNPCTLKFCS*PCETGMYESQPSVY
Trigger: ATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAACTGCAGAACTTGAGCGTGCATGGATTTTGGTATACACACGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CCA 90 bp TGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCATGGATGAGGTACTTTAAATATCTG +
Preference number: 1 (lower is better)
Translates to: CTPLCCATTEALEAL*GLMKSSWMRYFKYL
Trigger: CAGATATTTAAAGTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 90 bp ACAGAGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATaGCCAACGGTGCACCAGAAAGAAGAAATACTGGTGAATTCCCAC +
Preference number: 1 (lower is better)
Translates to: TEVAKSKYIHHCCQK*PTVHQKEEILVNSH
Trigger: GTGGGAATTCACCAGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CCA 90 bp GGGTACCAGGACCATTCATGGGGAAATAATAGTCTTTTCAACAACTaGTGCTTGGGCAGATGGATATACAGATACCAATGCACTTATGCA +
Preference number: 1 (lower is better)
Translates to: GYQDHSWGNNSLFNN*CLGRWIYRYQCTYA
Trigger: TGCATAAGTGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTATTATTTCCCCATGAATGGTCCTGGTACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 90 bp GTAACACAAGGCACAGTAGCCATCTTTTTCATTATGTTGCAACACTaGTCACGTGCCTCGATAAAATGGCTGATTCAACAAGATGATGGC +
Preference number: 1 (lower is better)
Translates to: VTQGTVAIFFIMLQH*SRASIKWLIQQDDG
Trigger: GCCATCATCTTGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACTGTGCCTTGTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR TCA 90 bp ACTGTACTTTCGGTGAAACTACCATGCATTAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTA +
Preference number: 1 (lower is better)
Translates to: TVLSVKLPCISSLSQ*YLPHTCIKILQCLL
Trigger: TAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGAAAGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 90 bp GCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTGGTaGATTCCCACATACCACGACGAACAACCTTATAAAATAACAGAA +
Preference number: 1 (lower is better)
Translates to: AARNDQRCTRKKKYW*IPTYHDEQPYKITE
Trigger: TTCTGTTATTTTATAAGGTTGTTCGTCGTGGTATGTGGGAATTCACCAGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CCA 90 bp ATCAAGACAGTGCGGTGCTGGTATAACGACAGACATATAGGGCAATaGAGTAAGACTGAGAATCCAGAAAGTCTTATATTTATGGTCAAC +
Preference number: 1 (lower is better)
Translates to: IKTVRCWYNDRHIGQ*SKTENPESLIFMVN
Trigger: GTTGACCATAAATATAAGACTTTCTGGATTCTCAGTCTTACTCCATTGCCCTATATGTCTGTCGTTATACCAGCACCGCACTGTCTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 90 bp TTTAATTACACATTAAGAAGCACAGTGGATGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGTCCCTTTCATCAAGGTAGCGTATGT +
Preference number: 1 (lower is better)
Translates to: FNYTLRSTVDEKPLR*LQLHEGPFHQGSVC
Trigger: ACATACGCTACCTTGATGAAAGGGACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTCATCCACTGTGCTTCTTAATGTGTAATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR TCA 90 bp TTCTACTGCATGCTCGGTCATTTTCAATCATTTAGGTGGCAACACTaGCAAGATAACAGAAAGATGGAGGTAATAACATGTGAAAGGCAA +
Preference number: 1 (lower is better)
Translates to: FYCMLGHFQSFRWQH*QDNRKMEVITCERQ
Trigger: TTGCCTTTCACATGTTATTACCTCCATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAATGATTGAAAATGACCGAGCATGCAGTAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 90 bp AGACTGAGAATCCAGAAAGTCTTATATTTATGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCATTCATGGGGAAATAATAGTCTTTTC +
Preference number: 1 (lower is better)
Translates to: RLRIQKVLYLWSTVL*QGYQDHSWGNNSLF
Trigger: GAAAAGACTATTATTTCCCCATGAATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCATAAATATAAGACTTTCTGGATTCTCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 90 bp ATTAAAGACGTCAAGACTTGCACACTGAAATCTCTAAAACATCACTaGAATAAAGACCTAAGCAAATGCAAAGACATCCCACAGTCATGG +
Preference number: 1 (lower is better)
Translates to: IKDVKTCTLKSLKHH*NKDLSKCKDIPQSW
Trigger: CCATGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTTATTTCAGTGATGTTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CCA 90 bp ACAAGAACAAAAATCCCTGTCCTTTCATATACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATTGCAAGACACATGAAGACGACATAC +
Preference number: 1 (lower is better)
Translates to: TRTKIPVLSYTKKED*LLKQFIARHMKTTY
Trigger: GTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGTATATGAAAGGACAGGGATTTTTGTTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSILRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSINGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTATCAGTAGCTGCCACTTaGACCAGTCTTAGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVSVAAT*TSLSRG
Trigger: TCCCCTGCTAAGACTGGTTCAAGTGGCAGCTACTGA...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTAATGTCAGAGGGCCCATaGAGTTCACAGCTGTGTTGT +
Preference number: 2 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVMSEGP*SSQLCC
Trigger: ACAACACAGCTGTGAACTTCATGGGCCCTCTGACAT...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSILTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAGAAGTGACAACCTGTaGCAATTGAGGAATGAGAGA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGRSDNL*QLRNER
Trigger: TCTCTCATTCCTCAATTGTCACAGGTTGTCACTTCT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGAGAAATATGACAAGTaGAGATGCTGGGTAGGAATG +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGEKYDK*RCWVGM
Trigger: CATTCCTACCCAGCATCTTCACTTGTCATATTTCTC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTTGCATGCCTTCTCACTaGAATCCATCAGTAGCTGCC +
Preference number: 2 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTCMPSH*NPSVAA
Trigger: GGCAGCTACTGATGGATTGCAGTGAGAAGGCATGCA...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTTGCACGCTCAAGTTCTaGAGTTGGCCCTGTGAAACT +
Preference number: 2 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTCTLKF*SWPCET
Trigger: AGTTTCACAGGGCCAACTGCAGAACTTGAGCGTGCA...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTCTCAAGTTCTGCAGTTaGCCCTGTGAAACTGGCATG +
Preference number: 2 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTLKFCS*PCETGM
Trigger: CATGCCAGTTTCACAGGGCCAACTGCAGAACTTGAG...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CAA 90 bp TCAACTAAGAAATGTACCCCATTATGCTGTGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTGATGAAGTCTTCATGGATGAGGTAC +
Preference number: 2 (lower is better)
Translates to: STKKCTPLCCATTEA*EALWGLMKSSWMRY
Trigger: GTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTTCTTAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPICTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGNGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSINLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACAGTTCATATGTATGTaGCGAGGAATGCAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIQFICM*RGMQGF
Trigger: AAAACCTTGCATTCCTCGTCACATACATATGAACTG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTCAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CAA 90 bp CCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATGAGGTACTTTAAATATCTGGTCATG +
Preference number: 2 (lower is better)
Translates to: PLCCATTEALEALWG*MKSSWMRYFKYLVM
Trigger: CATGACCAGATATTTAAAGTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPSSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTCACACACCCCTTTGGTaGATCAAATCTTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTHTPLW*IKSSSE
Trigger: TTCAGAGGAAGATTTGATTCACCAAAGGGGTGTGTG...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNADDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSILHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCAGGAAGGTACGTGTTTaGATGCCTTCTCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCRKVRV*MPSHCN
Trigger: ATTGCAGTGAGAAGGCATGCAAACACGTACCTTCCT...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTCAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNADQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNANGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINSSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTTGTATATGCAGGTTCTaGGTCCCACCAATACTGAAT +
Preference number: 2 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTCICRF*VPPILN
Trigger: ATTCAGTATTGGTGGGACTCAGAACCTGCATATACA...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR TCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACATCCCTTGGTATATGTaGCAGGGATTGGTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYIPWYM*QGLVPG
Trigger: TCCTGGAACCAATCCCTGTCACATATACCAAGGGAT...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTCTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPILICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTGTATACCAAAATCCATaGACGCTCAAGTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTVYQNP*TLKFCS
Trigger: ACTGCAGAACTTGAGCGTGCATGGATTTTGGTATAC...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 2 (lower is better)
Translates to: KCTPLCCATTEALEALWGYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 2 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 2 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAGAAGTGACAACCTGTaGCAATTGAGGAATGAGAGA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGRSDNL*QLRNER
Trigger: TCTCTCATTCCTCAATTGTCACAGGTTGTCACTTCT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACCTAGAGATAAAGGTCTaGAGCAAAATCACACACCCC +
Preference number: 2 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYLEIKV*SKITHP
Trigger: GGGGTGTGTGATTTTGCTTCAGACCTTTATCTCTAG...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTCGGTGAAACTACCATaGATTAGTAGCCTTTCACAG +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGSVKLP*ISSLSQ
Trigger: CTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINLTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 2 (lower is better)
Translates to: FHYVATLITCLDKMADSTRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: SWDDISSSDSLYGILEKNADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SWDDISSSDSLYGILEKNKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGNGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTCGACATTTCTTCCTCTaGCAGTTTGTATGGAATTCT +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIRHFFL*QFVWNS
Trigger: AGAATTCCATACAAACTGTCAGAGGAAGAAATGTCG...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGSSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGAATTTCCTCAACTTaGAGCAAACCCACAGCTAGC +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNARISST*SKPTAS
Trigger: GCTAGCTGTGGGTTTGCTTCAAGTTGAGGAAATTCT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACAAGAAGAAATACTGGTaGATTCCCACATACCACGAC +
Preference number: 2 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYKKKYW*IPTYHD
Trigger: GTCGTGGTATGTGGGAATTCACCAGTATTTCTTCTT...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTAGTAGTAAGGGCATTTaGTTAAAAGCAGATAGAACT +
Preference number: 2 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVSSKGI*LKADRT
Trigger: AGTTCTATCTGCTTTTAAGCAAATGCCCTTACTACT...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAGGACATCAGTAAATaGACTTTAGAGGTTAGGTCA +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASEDISK*TLEVRS
Trigger: TGACCTAACCTCTAAAGTGCATTTACTGATGTCCTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 2 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAGGGGAGAAAAGACTTaGGACTCTGTACTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGRGEKT*DSVLVK
Trigger: TTTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: FHYVATLITCLDKMADSTSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGAAGTGACAACCTGTaGCAATTGAGGAATGAGAGA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNARSDNL*QLRNER
Trigger: TCTCTCATTCCTCAATTGTCACAGGTTGTCACTTCT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCAGCATACTCTAACCAGTaGGGAATACTAGATAATCCA +
Preference number: 2 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSAYSNQ*GILDNP
Trigger: TGGATTATCTAGTATTCCTCACTGGTTAGAGTATGC...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACAATCCATACGCCAAATaGAGGAGATTACATGAGACT +
Preference number: 2 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYNPYAK*RRLHET
Trigger: AGTCTCATGTAATCTCCTGCATTTGGCGTATGGATT...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR GCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTATAGTTGAGACGGTCTaGAATGCAAACTATACATTA +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCIVETV*NANYTL
Trigger: TAATGTATAGTTTGCATTGCAGACCGTCTCAACTAT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 2 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGLTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: FHYVATLITCLDKMADSTKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 2 (lower is better)
Translates to: SWDDISSSDSLYGILEKNEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACGACATTTCTTCCTCTaGCAGTTTGTATGGAATTCT +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNARHFFL*QFVWNS
Trigger: AGAATTCCATACAAACTGTCAGAGGAAGAAATGTCG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNARLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNANLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAGTTTCCTCACACAATaGCAGCAAAGTATTTTCTCA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNSFLTQ*QQSIFS
Trigger: TGAGAAAATACTTTGCTGTCATTGTGTGAGGAAACT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR GCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 2 (lower is better)
Translates to: SWDDISSSDSLYGILEKNATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGTATGTGACGAGGAATaGAAGGTTTTCGGTAGGTAT +
Preference number: 2 (lower is better)
Translates to: FHYVATLITCLDKMADSTVCDEE*KVFGRY
Trigger: ATACCTACCGAAAACCTTGCATTCCTCGTCACATAC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCCTGTTTTACAAGACTaGAAAGTGTGTGCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNPVLQD*KVCALK
Trigger: TTTAAGAGCACACACTTTGCAGTCTTGTAAAACAGG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: PFTVISTPHLHQNLAVPITKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: NYHALVAFHSDIYPTPASTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 2 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATCAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNARHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 2 (lower is better)
Translates to: SIISLYKQASPKVVVSGNYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 2 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACGTGAGTTTGCTTATTTaGGAATTAGTACCTAGAGAT +
Preference number: 2 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYVSLLI*ELVPRD
Trigger: ATCTCTAGGTACTAATTCCCAAATAAGCAAACTCAC...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 2 (lower is better)
Translates to: FHYVATLITCLDKMADSTFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 2 (lower is better)
Translates to: IVFSTTGAWADGYTDTNATKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 2 (lower is better)
Translates to: SWDDISSSDSLYGILEKNRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAGAGATTTTGATGATTaGGGTGAAGGTTACATTTCT +
Preference number: 2 (lower is better)
Translates to: FTVISTPHLHQNLAVPINRDFDD*GEGYIS
Trigger: AGAAATGTAACCTTCACCCCAATCATCAAAATCTCT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 2 (lower is better)
Translates to: SSHLFHYVATLITCLDKMTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 2 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 2 (lower is better)
Translates to: SWDDISSSDSLYGILEKNTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 3 (lower is better)
Translates to: KCTPLCCATTEALEALWGATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSITQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp CCCAAAAGTAGTTGTCTCAGGAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAGCTGCCAAGGTCCAGA +
Preference number: 3 (lower is better)
Translates to: PKSSCLRKPGLG*PAHLLELPRSR
Trigger: TCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTTCCTGAGACAACTACTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp ATGCCTTCTCACTGCAATCCATCAGTAGCTGCCACTTaGACCAGTCTTAGCAGGGGATGGGGAAGCCTATGT +
Preference number: 3 (lower is better)
Translates to: MPSHCNPSVAAT*TSLSRGWGSLC
Trigger: ACATAGGCTTCCCCATCCCCTGCTAAGACTGGTTCAAGTGGCAGCTACTGATGGATTGCAGTGAGAAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 3 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 3 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR GCA 72 bp ATTGGTTCCAGGACCACGTGTGTATACCAAAATCCATaGACGCTCAAGTTCTGCAGTTGGCCCTGTGAAACT +
Preference number: 3 (lower is better)
Translates to: IGSRTTCVYQNP*TLKFCSWPCET
Trigger: AGTTTCACAGGGCCAACTGCAGAACTTGAGCGTGCATGGATTTTGGTATACACACGTGGTCCTGGAACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CCA 72 bp GTATACCAAAATCCATGCACGCTCAAGTTCTGCAGTTaGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCC +
Preference number: 3 (lower is better)
Translates to: VYQNPCTLKFCS*PCETGMYESQP
Trigger: GGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAACTGCAGAACTTGAGCGTGCATGGATTTTGGTATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CAA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 3 (lower is better)
Translates to: FTVISTPHLHQNLAVPINATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTCAGGAAGGTACGTGTTaGCATGCCTTCTCACTGCAA +
Preference number: 3 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTQEGTC*HAFSLQ
Trigger: TTGCAGTGAGAAGGCATGCAAACACGTACCTTCCTG...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGTQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 3 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR GCA 72 bp ACTCCTCACTGTTCAACTAAGAAATGTACCCCATTATaGTGTGCTACCACGGAAGCATTGGAGGCACTTTGG +
Preference number: 3 (lower is better)
Translates to: TPHCSTKKCTPL*CATTEALEALW
Trigger: CCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTTCTTAGTTGAACAGTGAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CCA 72 bp TTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCATGGATGAGGTACTTT +
Preference number: 3 (lower is better)
Translates to: LCCATTEALEAL*GLMKSSWMRYF
Trigger: AAAGTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 3 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPTQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: SIISLYKQASPKVVVSGNTQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 3 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTACATACAGCCATCCCTaGGTATATGTGACAGGGATT +
Preference number: 3 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTTYSHP*VYVTGI
Trigger: AATCCCTGTCACATATACCAAGGGATGGCTGTATGT...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 3 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 3 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 3 (lower is better)
Translates to: NYHALVAFHSDIYPTPASEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 3 (lower is better)
Translates to: FTVISTPHLHQNLAVPINEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTC +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASIGGT*GVDEVF
Trigger: GAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTAAATCACACACCCCTTaGGTGAATCAAATCTTCCTC +
Preference number: 3 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTKSHTP*VNQIFL
Trigger: GAGGAAGATTTGATTCACCAAAGGGGTGTGTGATTT...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR TCA 72 bp TCGGTGAAACTACCATGCATTAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGCATCAAAATCTTGCAG +
Preference number: 3 (lower is better)
Translates to: SVKLPCISSLSQ*YLPHTCIKILQ
Trigger: CTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp GCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATaGCCAACGGTGCACCAGAAAGAAGAAATACTGGTG +
Preference number: 3 (lower is better)
Translates to: AKSKYIHHCCQK*PTVHQKEEILV
Trigger: CACCAGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 3 (lower is better)
Translates to: SIISLYKQASPKVVVSGNEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 3 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: SIISLYKQASPKVVVSGNAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTCTATGTCTTTCAGAATaGGATGATGTAGTACACAGA +
Preference number: 3 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVLCLSE*DDVVHR
Trigger: TCTGTGTACTACATCATCCAATTCTGAAAGACATAG...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR TCA 72 bp ACATTAAGAAGCACAGTGGATGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGTCCCTTTCATCAAGGT +
Preference number: 3 (lower is better)
Translates to: TLRSTVDEKPLR*LQLHEGPFHQG
Trigger: ACCTTGATGAAAGGGACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTCATCCACTGTGCTTCTTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
3UTR CCA 72 bp GCATTGGAGGCACTTTGGGGGTTGATGAAGTCTTCATaGATGAGGTACTTTAAATATCTGGTCATGAAGAGT +
Preference number: 3 (lower is better)
Translates to: ALEALWGLMKSS*MRYFKYLVMKS
Trigger: ACTCTTCATGACCAGATATTTAAAGTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 3 (lower is better)
Translates to: NYHALVAFHSDIYPTPASHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 3 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp AATGACCAACGGTGCACCAGAAAGAAGAAATACTGGTaGATTCCCACATACCACGACGAACAACCTTATAAA +
Preference number: 3 (lower is better)
Translates to: NDQRCTRKKKYW*IPTYHDEQPYK
Trigger: TTTATAAGGTTGTTCGTCGTGGTATGTGGGAATTCACCAGTATTTCTTCTTTCTGGTGCACCGTTGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CCA 72 bp GACCATTCATGGGGAAATAATAGTCTTTTCAACAACTaGTGCTTGGGCAGATGGATATACAGATACCAATGC +
Preference number: 3 (lower is better)
Translates to: DHSWGNNSLFNN*CLGRWIYRYQC
Trigger: GCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTATTATTTCCCCATGAATGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 3 (lower is better)
Translates to: SIISLYKQASPKVVVSGNFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 3 (lower is better)
Translates to: NYHALVAFHSDIYPTPASFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 3 (lower is better)
Translates to: FTVISTPHLHQNLAVPINFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 3 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 3 (lower is better)
Translates to: SIISLYKQASPKVVVSGNSSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR GCA 72 bp TTTCCACAACAAAACCACAGAGAGGACATCAGTAAATaGACTTTAGAGGTTAGGTCACTGAGAAGTCAAGTA +
Preference number: 3 (lower is better)
Translates to: FPQQNHREDISK*TLEVRSLRSQV
Trigger: TACTTGACTTCTCAGTGACCTAACCTCTAAAGTGCATTTACTGATGTCCTCTCTGTGGTTTTGTTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635914.1
3UTR-3UTR CAA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 3 (lower is better)
Translates to: FTVISTPHLHQNLAVPINFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 3 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 3 (lower is better)
Translates to: SWDDISSSDSLYGILEKNFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 3 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 3 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp AGAAACAAAGAATGGTCGGTCGATAGAGATGCAAGATaGAGAATTTTGTTTTTAGGACTACTGACTATGAGG +
Preference number: 3 (lower is better)
Translates to: RNKEWSVDRDAR*RILFLGLLTMR
Trigger: CCTCATAGTCAGTAGTCCTAAAAACAAAATTCTTCATCTTGCATCTCTATCGACCGACCATTCTTTGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp ATGCTCGGTCATTTTCAATCATTTAGGTGGCAACACTaGCAAGATAACAGAAAGATGGAGGTAATAACATGT +
Preference number: 3 (lower is better)
Translates to: MLGHFQSFRWQH*QDNRKMEVITC
Trigger: ACATGTTATTACCTCCATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAATGATTGAAAATGACCGAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR TCA 72 bp GTCAAGACTTGCACACTGAAATCTCTAAAACATCACTaGAATAAAGACCTAAGCAAATGCAAAGACATCCCA +
Preference number: 3 (lower is better)
Translates to: VKTCTLKSLKHH*NKDLSKCKDIP
Trigger: TGGGATGTCTTTGCATTTGCTTAGGTCTTTATTTCAGTGATGTTTTAGAGATTTCAGTGTGCAAGTCTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR GCA 72 bp AAGGTGGAGAAAATACTCAAACCTGTTTTACAAGACTaGAAAGTGTGTGCTCTTAAATGCTTATTAGAAACA +
Preference number: 3 (lower is better)
Translates to: KVEKILKPVLQD*KVCALKCLLET
Trigger: TGTTTCTAATAAGCATTTAAGAGCACACACTTTGCAGTCTTGTAAAACAGGTTTGAGTATTTTCTCCACCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTATACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACACCGCCGGGGCTCATaGGGGACCCGCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIHRRGS*GTRASL
Trigger: TAAGGAAGCGCGGGTCCCGCATGAGCCCCGGCGGTG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTAGACGGGAGGACTGGCTaGGCGGGCCGAGTATCCCGG +
Preference number: 4 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVDGRTG*AGRVSR
Trigger: CCGGGATACTCGGCCCGCCCAGCCAGTCCTCCCGTC...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTCCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTAGCAAGACGGGAGGACTaGCTGGGCGGGCCGAGTATC +
Preference number: 4 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVARRED*LGGPSI
Trigger: GATACTCGGCCCGCCCAGCCAGTCCTCCCGTCTTGC...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTCACCGCCGGGGCTCATaGGGGACCCGCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCHRRGS*GTRASL
Trigger: TAAGGAAGCGCGGGTCCCGCATGAGCCCCGGCGGTG...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACCAGCGCCACCATCTTaGGAGACACACGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIPAPPS*ETHGSR
Trigger: GCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCCAGCGCCACCATCTTaGGAGACACACGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGPAPPS*ETHGSR
Trigger: GCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGCCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTAGACTGAGGTTCTCCTaGTCTGTCGTCGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVRLRFS*SVVAPA
Trigger: CGCGGGGGCGACGACAGATCAGGAGAACCTCAGTCT...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTCGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACCACCGCCGGGGCTCATaGGGGACCCGCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYHRRGS*GTRASL
Trigger: TAAGGAAGCGCGGGTCCCGCATGAGCCCCGGCGGTG...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCACCGCCGGGGCTCATaGGGGACCCGCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQHRRGS*GTRASL
Trigger: TAAGGAAGCGCGGGTCCCGCATGAGCCCCGGCGGTG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASLVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTCTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPILVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAACTTCCTTCCACACGTaGTGCCTTTCATGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSITSFHT*CLSWAP
Trigger: AGGAGCCCATGAAAGGCATCACGTGTGGAAGGAAGT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCACCGCCGGGGCTCATaGGGGACCCGCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHHRRGS*GTRASL
Trigger: TAAGGAAGCGCGGGTCCCGCATGAGCCCCGGCGGTG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACCTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYLVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPLVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCCCAGCGCCACCATCTTaGGAGACACACGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCPAPPS*ETHGSR
Trigger: GCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGG...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCACGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSICTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTACGCGGCGGAGGGGTaGGCGAGCGAGCGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGYAAEG*ASERSL
Trigger: CAGGCTTCGCTCGCTCGCGCACCCCTCCGCCGCGTA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFLVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGLVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATCTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINLVLFR*RHRRGS
Trigger: TGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAG...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTCTCCACCAGCCTTGTaGGTAAGTACCCCAAGATTG +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGSPPAL*VSTPRL
Trigger: CAATCTTGGGGTACTTACCCACAAGGCTGGTGGAGA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR CCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCGGGTCGGCAGAGGTaGAGCGTAAGTAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPGRQR*SVSRRR
Trigger: CCGCCGCCTACTTACGCTTCACCTCTGCCGACCCGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGACTGAGGTTCTCCTaGTCTGTCGTCGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRLRFS*SVVAPA
Trigger: CGCGGGGGCGACGACAGATCAGGAGAACCTCAGTCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635914.1
ENST00000649550.1
CDS-3UTR TCA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTATCAATGTCGTCAGACTaGGGTTCTCCTGATCTGTCG +
Preference number: 4 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVSMSSD*GSPDLS
Trigger: CGACAGATCAGGAGAACCTCAGTCTGACGACATTGA...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCACCGCCGGGGCTCATaGGGGACCCGCGCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGHRRGS*GTRASL
Trigger: TAAGGAAGCGCGGGTCCCGCATGAGCCCCGGCGGTG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCCAGCGCCACCATCTTaGGAGACACACGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELPAPPS*ETHGSR
Trigger: GCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACGAGCGAGCGAAGCCTaGTGTGTCGGGTCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTRASEA*CVGSWR
Trigger: TCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CAA 72 bp AGGAGACAAGTGAGGGAGCAAATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCATGGAAGGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RRQVREQMEGVF*DYTVAHGRVGG
Trigger: CCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTTGCTCCCTCACTTGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTCAATGTCGTCAGACTaGGGTTCTCCTGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGSMSSD*GSPDLV
Trigger: GACCAGATCAGGAGAACCTCAGTCTGACGACATTGA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGSSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGTGACTATGTTTTCTTaGCACCATACCTCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIVTMFS*HHTSPQ
Trigger: TTGAGGGGAGGTATGGTGTCAAGAAAACATAGTCAC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACCTCTAGTTGTAAGCTaGTTGATGGTAGGGATCATC +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIPLVVS*LMVGII
Trigger: GATGATCCCTACCATCAATCAGCTTACAACTAGAGG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAGAACTCCCCATGCTTaGGACTCTCCTTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIRTPHA*DSPCWS
Trigger: GGACCAGCAAGGAGAGTCTCAAGCATGGGGAGTTCT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636667.1
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGCAGCTTCTCCATCCTaGAAGCCACTCCTTTTACCT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGAASPS*KPLLLP
Trigger: AGGTAAAAGGAGTGGCTTGCAGGATGGAGAAGCTGC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTTGCATGCCTTCTCACTaGAATCCATCAGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVCMPSH*NPSVAA
Trigger: GGCAGCTACTGATGGATTGCAGTGAGAAGGCATGCA...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTGGGAGGGGTACAGATaGCCCTTAGACACTGGCGGA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQWEGYR*PLDTGG
Trigger: TCCGCCAGTGTCTAAGGGCCATCTGTACCCCTCCCA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CAA 72 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTGATGAAGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEA*EALWGLMKSSW
Trigger: CCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGACTGAGGTTCTCCTaGTCTGGTCTCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELRLRFS*SGLHQP
Trigger: AGGCTGGTGGAGACCAGATCAGGAGAACCTCAGTCT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATCAATGTCGTCAGACTaGGGTTCTCCTGATCTTTTA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISMSSD*GSPDLL
Trigger: TAAAAGATCAGGAGAACCTCAGTCTGACGACATTGA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGACTGAGGTTCTCCTaGTCTGTCGTCGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGRLRFS*SVVAPA
Trigger: CGCGGGGGCGACGACAGATCAGGAGAACCTCAGTCT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR TCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTATCCCTTGGTATATGTaGCAGGGATTGGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVIPWYM*QGLVPG
Trigger: TCCTGGAACCAATCCCTGTCACATATACCAAGGGAT...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTCGGTGAAACTACCATaGATTAGTAGCCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGSVKLP*ISSLSQ
Trigger: CTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCTGCACGCTCAAGTTCTaGAGTTGGCCCTGTGAAACT +
Preference number: 4 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCCTLKF*SWPCET
Trigger: AGTTTCACAGGGCCAACTGCAGAACTTGAGCGTGCA...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGAGGTTCTCCTGATCTaGTCTCCACCAGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNEVLLI*SPPALW
Trigger: CCACAAGGCTGGTGGAGACCAGATCAGGAGAACCTC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCCAGCGCCACCATCTTaGGAGACACACGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMPAPPS*ETHGSR
Trigger: GCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNWCVGS*RREKAP
Trigger: CGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATCAACAACTGGTGCTTaGGCAGATGGATATACAGAT +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISTTGA*ADGYTD
Trigger: ATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPISSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAGACTGAGGTTCTCCTaGTCTTTTACAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRLRFS*SFTSCG
Trigger: GCCACAGCTTGTAAAAGATCAGGAGAACCTCAGTCT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCACACTGCTGCCAGAAATaGCCAACGGTGCACCAGAAA +
Preference number: 4 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSHCCQK*PTVHQK
Trigger: TTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTG...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTCACAAAACTCATTCGTaGAGGCTTCATTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVHKTHS*RLHFHS
Trigger: GCTGTGGAAATGAAGCCTGCACGAATGAGTTTTGTG...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGATGACCAGCTCATTTaGTGGAGCTGCCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQDDQLI*WSCQGP
Trigger: TGGACCTTGGCAGCTCCAGCAAATGAGCTGGTCATC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGAGGTTCTCCTGATCTaGTCTCCACCAGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFEVLLI*SPPALW
Trigger: CCACAAGGCTGGTGGAGACCAGATCAGGAGAACCTC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCAGCGCCACCATCTTaGGAGACACACGGATCTCGC +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPAPPS*ETHGSR
Trigger: GCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAGGGGAGAAAAGACTTaGGACTCTGTACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIRGEKT*DSVLVK
Trigger: TTTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGCAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
3UTR CAA 72 bp ATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTCATGGATGAGGTACTT +
Preference number: 4 (lower is better)
Translates to: IMLCYHGSIGGT*GVDEVFMDEVL
Trigger: AAGTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAGACTGAGGTTCTCCTaGTCTGGTCTCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTRLRFS*SGLHQP
Trigger: AGGCTGGTGGAGACCAGATCAGGAGAACCTCAGTCT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTCAATGTCGTCAGACTaGGGTTCTCCTGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQSMSSD*GSPDLV
Trigger: GACCAGATCAGGAGAACCTCAGTCTGACGACATTGA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATATCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSISSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATACTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSILFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCAGCTGACTCATTTTTaGAAGTGCGACCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNQLTHF*KCDPPA
Trigger: TGCTGGAGGGTCGCACTTTCAAAAATGAGTCAGCTG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNNGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELSSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSITTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATCTAAGAATGTCCGGGTaGGTCAGAGGATCAGGACCT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINLRMSG*VRGSGP
Trigger: AGGTCCTGATCCTCTGACTCACCCGGACATTCTTAG...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGAGAAATATGACAAGTaGAGATGCTGGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGEKYDK*RCWVGM
Trigger: CATTCCTACCCAGCATCTTCACTTGTCATATTTCTC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCATCATACTCAATGGTaGAAGACTGAATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGHHTQW*KTECFP
Trigger: GGGAAAGCATTCAGTCTTTCACCATTGAGTATGATG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAGAATTTCCTCAACTTaGAGCAAACCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRISST*SKPTAS
Trigger: GCTAGCTGTGGGTTTGCTTCAAGTTGAGGAAATTCT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAGACTGAGGTTCTCCTaGTCTTTTACAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASRLRFS*SFTSCG
Trigger: GCCACAGCTTGTAAAAGATCAGGAGAACCTCAGTCT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTCAATGTCGTCAGACTaGGGTTCTCCTGATCTGTCG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELSMSSD*GSPDLS
Trigger: CGACAGATCAGGAGAACCTCAGTCTGACGACATTGA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635914.1
ENST00000649550.1
CDS-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTCTAGAGATAAAGGTCTaGAGCAAAATCACACACCCC +
Preference number: 4 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTLEIKV*SKITHP
Trigger: GGGGTGTGTGATTTTGCTTCAGACCTTTATCTCTAG...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAAGCAGGGCAGACTATaGCTCGTGTCACTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHKQGRL*LVSLPS
Trigger: GGAAGGAAGTGACACGAGTCATAGTCTGCCCTGCTT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTCGGTGAAACTACCATaGATTAGTAGCCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGSVKLP*ISSLSQ
Trigger: CTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGAGGTTCTCCTGATCTaGTCTCCACCAGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMEVLLI*SPPALW
Trigger: CCACAAGGCTGGTGGAGACCAGATCAGGAGAACCTC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGCAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGLTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPILTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASALEAL*GLMKSS
Trigger: TGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIALEAL*GLMKSS
Trigger: TGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: KCTPLCCATTEALEALWGKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACCTCAAGTTCTGCAGTTaGCCCTGTGAAACTGGCATG +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYLKFCS*PCETGM
Trigger: CATGCCAGTTTCACAGGGCCAACTGCAGAACTTGAG...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTCAATGTCGTCAGACTaGGGTTCTCCTGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSMSSD*GSPDLV
Trigger: GACCAGATCAGGAGAACCTCAGTCTGACGACATTGA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCAGCTGACTCATTTTTaGAAGTGCGACCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHQLTHF*KCDPPA
Trigger: TGCTGGAGGGTCGCACTTTCAAAAATGAGTCAGCTG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPISLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAAACCAGGGTTAGGATaGCCAGCTCATTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGKPGLG*PAHLLE
Trigger: CTCCAGCAAATGAGCTGGTCATCCTAACCCTGGTTT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTGTACCGAGGAGGGATaGGTAACATCGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHCTEEG*VTSASS
Trigger: AGAACTTGCCGATGTTACTCATCCCTCCTCGGTACA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINNGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHSSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGTAGCCTTTCACAGTaGTATCTACCCCACACCTGC +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASSLSQ*YLPHTC
Trigger: GCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTGAGAAATATGACAAGTaGAGATGCTGGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCEKYDK*RCWVGM
Trigger: CATTCCTACCCAGCATCTTCACTTGTCATATTTCTC...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTCAATGTCGTCAGACTaGGGTTCTCCTGATCTGTCG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSMSSD*GSPDLS
Trigger: CGACAGATCAGGAGAACCTCAGTCTGACGACATTGA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635914.1
ENST00000649550.1
CDS-3UTR TCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTGCATACTCTAACCAGTaGGGAATACTAGATAATCCA +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVAYSNQ*GILDNP
Trigger: TGGATTATCTAGTATTCCTCACTGGTTAGAGTATGC...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCTGTATATGCAGGTTCTaGGTCCCACCAATACTGAAT +
Preference number: 4 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCCICRF*VPPILN
Trigger: ATTCAGTATTGGTGGGACTCAGAACCTGCATATACA...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTAAGAAGAAATACTGGTaGATTCCCACATACCACGAC +
Preference number: 4 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTKKKYW*IPTYHD
Trigger: GTCGTGGTATGTGGGAATTCACCAGTATTTCTTCTT...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGCAGCTTCTCCATCCTaGAAGCCACTCCTTTTACCT +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHAASPS*KPLLLP
Trigger: AGGTAAAAGGAGTGGCTTGCAGGATGGAGAAGCTGC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000638155.1
ENST00000650110.1
CDS-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTCGGTGAAACTACCATaGATTAGTAGCCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCSVKLP*ISSLSQ
Trigger: CTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTAATCCATACGCCAAATaGAGGAGATTACATGAGACT +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVNPYAK*RRLHET
Trigger: AGTCTCATGTAATCTCCTGCATTTGGCGTATGGATT...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTATTTCACTCAAAAAGTaGTTGATCCTGGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVISLKK*LILGSH
Trigger: ATGGCTTCCCAGGATCAAGCACTTTTTGAGTGAAAT...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCTCTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNLFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGAG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCTCTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELLFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGAG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000638155.1
ENST00000650110.1
CDS-3UTR CCA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCAAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQLTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTGACTAGAGGGAACTaGGCAAGAACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELLTRGN*ARTGKD
Trigger: GTCCTTACCTGTTCTTGCCCAGTTCCCTCTAGTCAA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQALEAL*GLMKSS
Trigger: TGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTCAACAACTGGTGCTTaGGCAGATGGATATACAGAT +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCSTTGA*ADGYTD
Trigger: ATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTATCTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIIFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGAT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACAGTCTTAGCAGGGGATaGGGAAGCCTATGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYSLSRG*GSLCLS
Trigger: TGAAAGACATAGGCTTCCCCATCCCCTGCTAAGACT...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
3UTR CAA 72 bp TGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATGAGGTACTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: CATTEALEALWG*MKSSWMRYFKY
Trigger: ATATTTAAAGTACCTCATCCATGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTTCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCAGCTGACTCATTTTTaGAAGTGCGACCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMQLTHF*KCDPPA
Trigger: TGCTGGAGGGTCGCACTTTCAAAAATGAGTCAGCTG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGGCACAGACATAGGTaGCTACTGTGGTTGACTATC +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRHRHR*LLWLTI
Trigger: GATAGTCAACCACAGTAGTCACCTATGTCTGTGCCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGCTGATTCAACAAGATaGTGGCAACACGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTADSTR*WQHEGE
Trigger: CTCCCCTTCGTGTTGCCATCATCTTGTTGAATCAGC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMNGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAATGGGAATAGGGAGTaGTGCTGCCCCATTACAACC +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTNGNRE*CCPITT
Trigger: GGTTGTAATGGGGCAGCATCACTCCCTATTCCCATT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTTCCTCGAAGGGGCCTaGAATCTCAGAATGGTCATG +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMFLEGA*NLRMVM
Trigger: CATGACCATTCTGAGATTTCAGGCCCCTTCGAGGAA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGAGAAATATGACAAGTaGAGATGCTGGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGEKYDK*RCWVGM
Trigger: CATTCCTACCCAGCATCTTCACTTGTCATATTTCTC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAGAAATATGACAAGTaGAGATGCTGGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASEKYDK*RCWVGM
Trigger: CATTCCTACCCAGCATCTTCACTTGTCATATTTCTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACATCATACTCAATGGTaGAAGACTGAATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASHHTQW*KTECFP
Trigger: GGGAAAGCATTCAGTCTTTCACCATTGAGTATGATG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAGAATTTCCTCAACTTaGAGCAAACCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRISST*SKPTAS
Trigger: GCTAGCTGTGGGTTTGCTTCAAGTTGAGGAAATTCT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAAGAATTTCCTCAACTTaGAGCAAACCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPRISST*SKPTAS
Trigger: GCTAGCTGTGGGTTTGCTTCAAGTTGAGGAAATTCT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAGACTGAGGTTCTCCTaGTCTTTTACAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHRLRFS*SFTSCG
Trigger: GCCACAGCTTGTAAAAGATCAGGAGAACCTCAGTCT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGCAGCTTCTCCATCCTaGAAGCCACTCCTTTTACCT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTAASPS*KPLLLP
Trigger: AGGTAAAAGGAGTGGCTTGCAGGATGGAGAAGCTGC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000638155.1
ENST00000650110.1
CDS-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGLHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCAAGAAAAAGATGTCTaGTCTTGTCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGQEKDV*SCHFYP
Trigger: TGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCAGAAATGACCAACGGTaGACCAGAAAGAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCRNDQR*TRKKKY
Trigger: GTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCT...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATCTCCACCAGCCTTGTaGGTAAGTACCCCAAGATTG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTSPPAL*VSTPRL
Trigger: CAATCTTGGGGTACTTACCCACAAGGCTGGTGGAGA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGACCAGCTCATTTGCTaGAGCTGCCAAGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNDQLIC*SCQGPE
Trigger: TTCTGGACCTTGGCAGCTCCAGCAAATGAGCTGGTC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTTGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAGGGGAGAAAAGACTTaGGACTCTGTACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCRGEKT*DSVLVK
Trigger: TTTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFALEAL*GLMKSS
Trigger: TGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAALEAL*GLMKSS
Trigger: TGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGCATTGGAGGCACTTTaGGGGTTGATGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHALEAL*GLMKSS
Trigger: TGAAGACTTCATCAACCCCCAAAGTGCCTCCAATGC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTCAACAACTGGTGCTTaGGCAGATGGATATACAGAT +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPISTTGA*ADGYTD
Trigger: ATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGATCTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELIFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGAT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CATTCACCACTGCTGCCAGAAATGACCAACGGTGCACCAGAAAGAAGAAATACTGTGAGCACATTTTGTTaGAAAAATGGTGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: HSPLLPEMTNGAPERRNTVSTFC*KNGAGR
Trigger: TCTACCAGCACCATTTTTCCAACAAAATGTGCTCAC...AGTATTTCTTCTTTCTGGTGCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCACTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFHFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGTG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630424.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMVLKVS*ACSFLG
Trigger: TCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAAC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCTCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCSSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCCAGAGACAGAGGTCTaGGCAAAAGATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMPETEV*AKDMGL
Trigger: CAATCCCATATCTTTTGCTCAGACCTCTGTCTCTGG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGAAGTGACAACCTGTaGCAATTGAGGAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELRSDNL*QLRNER
Trigger: TCTCTCATTCCTCAATTGTCACAGGTTGTCACTTCT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGAGAAATATGACAAGTaGAGATGCTGGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNEKYDK*RCWVGM
Trigger: CATTCCTACCCAGCATCTTCACTTGTCATATTTCTC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATGGTCAACTGTTCTTTaGCAAGGGTACCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTWSTVL*QGYQDH
Trigger: ATGGTCCTGGTACCCTTGTCAAAGAACAGTTGACCA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCATCATACTCAATGGTaGAAGACTGAATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQHHTQW*KTECFP
Trigger: GGGAAAGCATTCAGTCTTTCACCATTGAGTATGATG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGAATTTCCTCAACTTaGAGCAAACCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRISST*SKPTAS
Trigger: GCTAGCTGTGGGTTTGCTTCAAGTTGAGGAAATTCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCACAAAACTCATTCGTaGAGGCTTCATTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGHKTHS*RLHFHS
Trigger: GCTGTGGAAATGAAGCCTGCACGAATGAGTTTTGTG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCAAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AGAGAGGACATCAGTAAATGCACTTTAGAGGTTAGGTCACTGAGAAGTCAAGTAGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: REDISKCTLEVRSLRSQVATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...TACTTGACTTCTCAGTGACCTAACCTCTAAAGTGCATTTACTGATGTCCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGCAACACTGATCACGTaGCTCGATAAAATGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFATLIT*LDKMAD
Trigger: ATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATACCCCATTATGCTGTaGTACCACGGAAGCATTGGA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTYPIML*YHGSIG
Trigger: TCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACGTATACCAAAATCCATaGACGCTCAAGTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYVYQNP*TLKFCS
Trigger: ACTGCAGAACTTGAGCGTGCATGGATTTTGGTATAC...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGGAACCCTTATTCACTaGTGGTGGGAATGTAAAATG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNGTLIH*WWECKM
Trigger: CATTTTACATTCCCACCAGCAGTGAATAAGGGTTCC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR GCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGAGGACATCAGTAAATaGACTTTAGAGGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIEDISK*TLEVRS
Trigger: TGACCTAACCTCTAAAGTGCATTTACTGATGTCCTC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACTCTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTLFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGAG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000638155.1
ENST00000650110.1
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACAGTGTTCTAAAGGCTaGCCCAGAAAAACCCCATGT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTQCSKG*PRKTPC
Trigger: ACATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCATGGCCCTTAGACACTaGCGGAAAGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGMALRH*RKVREK
Trigger: TTTTTCTCTGACTTTCCGCCAGTGTCTAAGGGCCAT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCACAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTCAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GTTGGCCCTGTGAAACTGGCATGTATGAAAGTCAGCCCTCTGTATATGCAGGTTGTGAGTTTGCTTATTTaGGAATTAGTACCTAGAGAT +
Preference number: 4 (lower is better)
Translates to: VGPVKLACMKVSPLYMQVVSLLI*ELVPRD
Trigger: ATCTCTAGGTACTAATTCCCAAATAAGCAAACTCAC...AACCTGCATATACAGAGGGCTGACTTTCATACATGCCAGTTTCACAGGGCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGGTGGGAATGTAAAATaGTGCAGTCACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPGGNVK*CSHCGK
Trigger: TTTTCCACAGTGACTGCACCATTTTACATTCCCACC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCTTTCTTGGAGGGATaGGGATCACAGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPFLEG*GSQSFA
Trigger: TGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPISSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGAGAAGCCTTTAAGATaGCTACAGTTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTEKPLR*LQLHEG
Trigger: ACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPITTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGAAGTGACAACCTGTaGCAATTGAGGAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGRSDNL*QLRNER
Trigger: TCTCTCATTCCTCAATTGTCACAGGTTGTCACTTCT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCATCATACTCAATGGTaGAAGACTGAATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGHHTQW*KTECFP
Trigger: GGGAAAGCATTCAGTCTTTCACCATTGAGTATGATG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATCAATGTCGTCAGACTaGGGTTCTCCTGATCTTTTA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASMSSD*GSPDLL
Trigger: TAAAAGATCAGGAGAACCTCAGTCTGACGACATTGA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCAGTTCATATGTATGTaGCGAGGAATGCAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNQFICM*RGMQGF
Trigger: AAAACCTTGCATTCCTCGTCACATACATATGAACTG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATCAATGTCGTCAGACTaGGGTTCTCCTGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTSMSSD*GSPDFQ
Trigger: TTGGAAATCAGGAGAACCTCAGTCTGACGACATTGA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650110.1
CDS-3UTR GCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACTCATTTGCTGGAGCTaGCAAGGTCCAGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTLICWS*QGPEKF
Trigger: AAACTTTTCTGGACCTTGGCAGCTCCAGCAAATGAG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTCGGTGAAACTACCATaGATTAGTAGCCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHSVKLP*ISSLSQ
Trigger: CTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATCGGTGAAACTACCATaGATTAGTAGCCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASVKLP*ISSLSQ
Trigger: CTGTGAAAGGCTACTAATGCATGGTAGTTTCACCGA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAAATGTACCCCATTATaGTGTGCTACCACGGAAGCA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTKCTPL*CATTEA
Trigger: TGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGCAAGAAAAAGATGTCTaGTCTTGTCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGQEKDV*SCHFYP
Trigger: TGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTG...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGTATGTGACGAGGAATaGAAGGTTTTCGGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINVCDEE*KVFGRY
Trigger: ATACCTACCGAAAACCTTGCATTCCTCGTCACATAC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGGGAATGTAAAATGGTaGAGTCACTGTGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHGNVKW*SHCGKQ
Trigger: CTGTTTTCCACAGTGACTGCACCATTTTACATTCCC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAGCTTGCTCCTTTCTTaGAGGGATGAGGATCACAGA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNSLLLS*RDEDHR
Trigger: TCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCCTCCAGAGCTTCCTaGAGATTGAGGTCTAATTCA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPSRAS*RLRSNS
Trigger: TGAATTAGACCTCAATCTCCAGGAAGCTCTGGAGGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACTGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAGGGGAGAAAAGACTTaGGACTCTGTACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQRGEKT*DSVLVK
Trigger: TTTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCTCAACAACTGGTGCTTaGGCAGATGGATATACAGAT +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGSTTGA*ADGYTD
Trigger: ATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGA...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACCTCTTGAGGATGAGTTaGAAGCTACTTTATCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYLLRMS*KLLYLS
Trigger: TGACAGATAAAGTAGCTTCCAACTCATCCTCAAGAG...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCTTATTCACTGCTGGTaGGAATGTAAAATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFLIHCW*ECKMVQ
Trigger: CTGCACCATTTTACATTCCCACCAGCAGTGAATAAG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCTCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCACTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPLFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQLFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTATCCTTTGGCATACGTaGTGGCCTTCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGILWHT*WPSTIS
Trigger: AGAGATTGTTGAAGGCCATCACGTATGCCAAAGGAT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCATTGCAAGACACATaGAGACGACATACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNSLQDT*RRHTVA
Trigger: TGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTATTATGTTGCAACACTaGTCACGTGCCTCGATAAAA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFIMLQH*SRASIK
Trigger: TTTTATCGAGGCACGTGATCAGTGTTGCAACATAAT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGGTCAGCTTACTGTATaGTTAAGTAACACAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTGQLTV*LSNTRH
Trigger: GTGCCTTGTGTTACTTAATCATACAGTAAGCTGACC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGAGCTTCCTGGAGATTaGGGTCTAATTCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFELPGD*GLIQRK
Trigger: TTTTCTTTGAATTAGACCTCAATCTCCAGGAAGCTC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCGACATTTCTTCCTCTaGCAGTTTGTATGGAATTCT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRHFFL*QFVWNS
Trigger: AGAATTCCATACAAACTGTCAGAGGAAGAAATGTCG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCTTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAGAATTTCCTCAACTTaGAGCAAACCCACAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNRISST*SKPTAS
Trigger: GCTAGCTGTGGGTTTGCTTCAAGTTGAGGAAATTCT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTCAATGTCGTCAGACTaGGGTTCTCCTGATCTTTTA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSMSSD*GSPDLL
Trigger: TAAAAGATCAGGAGAACCTCAGTCTGACGACATTGA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACTTAATGAATCACCTTTaGAACTCAGAACAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYLMNHL*NSEQVA
Trigger: TGCTACCTGTTCTGAGTTTCAAAGGTGATTCATTAA...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR TCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAGTTTCCTCACACAATaGCAGCAAAGTATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELSFLTQ*QQSIFS
Trigger: TGAGAAAATACTTTGCTGTCATTGTGTGAGGAAACT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR TCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGCTGCTCGCTTCATTTaGAACAGAAGATATAGGTTT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINAARFI*NRRYRF
Trigger: AAACCTATATCTTCTGTTTCAAATGAAGCGAGCAGC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS-3UTR GCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGAGGGCTTTAATAGCTaGTGCATTATTATCCATACG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHEGFNS*CIIIHT
Trigger: CGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATCCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGTGCCTATTAATAAATaGCAACCCACTAACGGGGAG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNVPINK*QPTNGE
Trigger: CTCCCCGTTAGTGGGTTGGCATTTATTAATAGGCAC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNLHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGACTACCATTTCATTTaGCCAAATGCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTDYHFI*PNALSP
Trigger: TGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPITKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNARASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGGTCCAGAAAAGTTTaGCTGCAGGCTGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGRSRKV*LQAVFM
Trigger: CATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTTTTGGATTATACAGTaGCTCATGGAAGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNFWIIQ*LMEGWE
Trigger: CTCCCACCCTTCCATGAGCCACTGTATAATCCAAAA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGGGGAGAAAAGACTTaGGACTCTGTACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRGEKT*DSVLVK
Trigger: TTTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAGAGATTTTGATGATTaGGGTGAAGGTTACATTTCT +
Preference number: 4 (lower is better)
Translates to: NYHALVAFHSDIYPTPASRDFDD*GEGYIS
Trigger: AGAAATGTAACCTTCACCCCAATCATCAAAATCTCT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATCAACAACTGGTGCTTaGGCAGATGGATATACAGAT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTSTTGA*ADGYTD
Trigger: ATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTCAACAACTGGTGCTTaGGCAGATGGATATACAGAT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSTTGA*ADGYTD
Trigger: ATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATATCTTTTACAAGCTGTaGCCATTCGGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNIFYKL*PFGDIR
Trigger: CCTGATGTCACCGAATGGCCACAGCTTGTAAAAGAT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000637886.1
ENST00000638011.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCTCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGSSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHSSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCATCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNASSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHLFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNALFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAAGAGGATTGGCTACTaGAACAGTTCATTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNKRIGY*NSSLQD
Trigger: GTCTTGCAATGAACTGTTTCAGTAGCCAATCCTCTT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACGACATTTCTTCCTCTaGCAGTTTGTATGGAATTCT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTRHFFL*QFVWNS
Trigger: AGAATTCCATACAAACTGTCAGAGGAAGAAATGTCG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCGACATTTCTTCCTCTaGCAGTTTGTATGGAATTCT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMRHFFL*QFVWNS
Trigger: AGAATTCCATACAAACTGTCAGAGGAAGAAATGTCG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAGAAGTGACAACCTGTaGCAATTGAGGAATGAGAGA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNRSDNL*QLRNER
Trigger: TCTCTCATTCCTCAATTGTCACAGGTTGTCACTTCT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGTGTTCTAGCACAATaGAAAGGATTGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGSVLAQ*KGLEEG
Trigger: TCCCTCTTCCAATCCTTTTCATTGTGCTAGAACACT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAATCTGTGGAGGCACTaGATGCAGAGGATATTAAAA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMNLWRH*MQRILK
Trigger: TTTTAATATCCTCTGCATTCAGTGCCTCCACAGATT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATCATCATACTCAATGGTaGAAGACTGAATGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNHHTQW*KTECFP
Trigger: GGGAAAGCATTCAGTCTTTCACCATTGAGTATGATG...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGCAGCAGCAGAACATaGAGCTTTTTCCTTTTCATC +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGSSSRT*SFFLFI
Trigger: GATGAAAAGGAAAAAGCTGCATGTTCTGCTGCTGCT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGLHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNALHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFLHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCTACATTCTACTGCATaGTCGGTCATTTTCAATCAT +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHLHSTA*SVIFNH
Trigger: ATGATTGAAAATGACCGAGCATGCAGTAGAATGTAG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATTTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAAAATTCATATGCAATaGAAGGGACCCAAAACAGAC +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINKIHMQ*KGPKTD
Trigger: GTCTGTTTTGGGTCCCTTGCATTGCATATGAATTTT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATCAAGAAAAAGATGTCTaGTCTTGTCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINQEKDV*SCHFYP
Trigger: TGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTG...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCAAGAAAAAGATGTCTaGTCTTGTCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGQEKDV*SCHFYP
Trigger: TGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACAGTAGTAAGGGCATTTaGTTAAAAGCAGATAGAACT +
Preference number: 4 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYSSKGI*LKADRT
Trigger: AGTTCTATCTGCTTTTAAGCAAATGCCCTTACTACT...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCCTGTTTTACAAGACTaGAAAGTGTGTGCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHPVLQD*KVCALK
Trigger: TTTAAGAGCACACACTTTGCAGTCTTGTAAAACAGG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: SIISLYKQASPKVVVSGNTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATGGAAGGTGTGTTTTTaGATTATACAGTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTWKVCF*IIQWLM
Trigger: CATGAGCCACTGTATAATCCAAAAACACACCTTCCA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAGGGGAGAAAAGACTTaGGACTCTGTACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTRGEKT*DSVLVK
Trigger: TTTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: TETVHCKTHEDDILWHELDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACAAAAGATATGGGATTaGGGAAGAATCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTQKIWD*GRIFGS
Trigger: ACTCCCAAAGATTCTTCCCCAATCCCATATCTTTTG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAGAGATTTTGATGATTaGGGTGAAGGTTACATTTCT +
Preference number: 4 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQRDFDD*GEGYIS
Trigger: AGAAATGTAACCTTCACCCCAATCATCAAAATCTCT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAAGGTTTATGTAGCATaGACAACTGAGATTATCCCA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINKVYVA*TTEIIP
Trigger: TGGGATAATCTCAGTTGTCCATGCTACATAAACCTT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATACCCTTATTCACTGCTaGTGGGAATGTAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNTLIHC*WECKMV
Trigger: CACCATTTTACATTCCCACCAGCAGTGAATAAGGGT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638155.1
3UTR CAA 72 bp ACAAACAACAAACTTCCTAACTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGCCAAATGCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: TNNKLPNFVAIG*TTISFGQMHFP
Trigger: GGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAGTTTGTTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTSSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTCTTCATCTTTTGCTTaGAGAGATTTCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSSSFA*RDFSSS
Trigger: GGAAGAACTGAAATCTCTTCAAGCAAAAGATGAAGA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCCACAACCAGCTaGAAAAATTCTTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNSSTTS*KNSLET
Trigger: TGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTLFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMLFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCGACATTTCTTCCTCTaGCAGTTTGTATGGAATTCT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGRHFFL*QFVWNS
Trigger: AGAATTCCATACAAACTGTCAGAGGAAGAAATGTCG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAGACTGTACTTTCGGTaGAACTACCATGCATTAGTA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNRLYFR*NYHALV
Trigger: TACTAATGCATGGTAGTTTCACCGAAAGTACAGTCT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGTGACAATTGAGGAATaGGAGATTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNVTIEE*EILMIG
Trigger: CCCAATCATCAAAATCTCTCATTCCTCAATTGTCAC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTTTAGGTGGCAACACTaGCAAGATAACAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGFRWQH*QDNRKM
Trigger: CATCTTTCTGTTATCTTGTCAGTGTTGCCACCTAAA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTTTCATTTGGCCAAATaGACTTTCCCCAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMFHLAK*TFPSKL
Trigger: AAGTTTACTGGGGAAAGTGCATTTGGCCAAATGAAA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR GCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATCCAGAAAAGTTTGGCTaGAGGCTGTTTTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNPEKFG*RLFSCF
Trigger: AAAACATGAAAACAGCCTGCAGCCAAACTTTTCTGG...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAAAGACCTAAGCAAATaGAAAGACATCCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGKDLSK*KDIPQS
Trigger: TGACTGTGGGATGTCTTTGCATTTGCTTAGGTCTTT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAAAGACGTCAAGACTTaGACACTGAAATCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFKDVKT*TLKSLK
Trigger: TTTTAGAGATTTCAGTGTGCAAGTCTTGACGTCTTT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAATAGTTGAGACGGTCTaGAATGCAAACTATACATTA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAIVETV*NANYTL
Trigger: TAATGTATAGTTTGCATTGCAGACCGTCTCAACTAT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: FTVISTPHLHQNLAVPINTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCGTGCCTCGATAAAATaGCTGATTCAACAAGATGAT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGRASIK*LIQQDD
Trigger: ATCATCTTGTTGAATCAGCCATTTTATCGAGGCACG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAAAATCTGGGTAAACTaGGATGGAAAAACAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMKIWVN*DGKTSS
Trigger: GCTACTTGTTTTTCCATCCCAGTTTACCCAGATTTT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: IVFSTTGAWADGYTDTNADFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: SSHLFHYVATLITCLDKMKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGAGATTTTGATGATTaGGGTGAAGGTTACATTTCT +
Preference number: 4 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRDFDD*GEGYIS
Trigger: AGAAATGTAACCTTCACCCCAATCATCAAAATCTCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAGACATATAGGGCAATaGAGTAAGACTGAGAATCCA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNRHIGQ*SKTENP
Trigger: TGGATTCTCAGTCTTACTCCATTGCCCTATATGTCT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCTGTTCATCTGTAAATaGATGAACGATTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGLFICK*MNDFPE
Trigger: TTCTGGGAAATCGTTCATTCATTTACAGATGAACAG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR TCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTACAACCTGTGACAATTaGGGAATGAGAGATTTTGAT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGTTCDN*GMRDFD
Trigger: ATCAAAATCTCTCATTCCTCAATTGTCACAGGTTGT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGGCTTTAATAGCTGCTaGATTATTATCCATACGAAG +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNGFNSC*IIIHTK
Trigger: CTTCGTATGGATAATAATGCAGCAGCTATTAAAGCC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCCCTCCCACTACATTTaGATAGTAAACCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGPSHYI*IVNHFQ
Trigger: TTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTTCACTACATTCTACTaGATGCTCGGTCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNFTTFY*MLGHFQ
Trigger: TTGAAAATGACCGAGCATGCAGTAGAATGTAGTGAA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR GCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTCAAGAAAAAGATGTCTaGTCTTGTCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGQEKDV*SCHFYP
Trigger: TGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTG...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGAAGACGACATACTGTaGCATGAGTTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNEDDIL*HELFLF
Trigger: AAACAAAAACAACTCATGCCACAGTATGTCGTCTTC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CCA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FHYVATLITCLDKMADSTYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATAAAAGAAACAAAGAATaGTCGGTCGATAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNKRNKE*SVDRDA
Trigger: TGCATCTCTATCGACCGACCATTCTTTGTTTCTTTT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTACTAAGAAAGAGGATTaGCTACTGAAACAGTTCATT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGTKKED*LLKQFI
Trigger: AATGAACTGTTTCAGTAGCCAATCCTCTTTCTTAGT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTACGAAGGGGAGACTTTaGATTGTCTATTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGTKGRL*IVYLKS
Trigger: AGATTTTAAATAGACAATCCAAAGTCTCCCCTTCGT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTATCCATCTAAAATCTaGGTAAACTGGGATGGAAAA +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGYPSKI*VNWDGK
Trigger: TTTTCCATCCCAGTTTACCCAGATTTTAGATGGATA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGACTTTAAGCAGAATTaGAGGAGTATCCATCTAAAA +
Preference number: 4 (lower is better)
Translates to: SWDDISSSDSLYGILEKNDFKQN*RSIHLK
Trigger: TTTTAGATGGATACTCCTCCAATTCTGCTTAAAGTC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CCA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAGAGATTTTGATGATTaGGGTGAAGGTTACATTTCT +
Preference number: 4 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGRDFDD*GEGYIS
Trigger: AGAAATGTAACCTTCACCCCAATCATCAAAATCTCT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS GCA 90 bp CTGAGCGTAGGCTTAATAACTCTGTCGTCGCCCCCGCGCCTGGGCTaGGGCGGCCGCCTCACTGGTCGTAGTCGCCCTCGCCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LSVGLITLSSPPRLG*GGRLTGRSRPRPPP
Trigger: AGGCGGCGGGCGAGGGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGAGTTATTAAGCCTACGCTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625681.2
CDS GCA 90 bp TGGAAAACAGTATGGCAGTCTCTGTCGTCGCCCCCGCGCCTGGGCTaGGGCGGCCGCCTCACTGGTCGTAGTCGCCCTCGCCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: WKTVWQSLSSPPRLG*GGRLTGRSRPRPPP
Trigger: AGGCGGCGGGCGAGGGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGAGACTGCCATACTGTTTTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS CCA 90 bp GCCCCGTCGTCTCCTGTAGTCACCCCGAGCCCAGCGCCACCATCTTaGGAGACACACGGATCTCGCGGCCGCGGCGCAAGACGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: APSSPVVTPSPAPPS*ETHGSRGRGARRED
Trigger: GTCCTCCCGTCTTGCGCCGCGGCCGCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGGCTCGGGGTGACTACAGGAGACGACGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000625778.3
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS CCA 90 bp CACTGTGGAAAACAGTATGGCAGTCTCTGTCGTCGCCCCCGCGCCTaGGCTGCGGCGGCCGCCTCACTGGTCGTAGTCGCCCTCGCCCGC +
Preference number: 5 (lower is better)
Translates to: HCGKQYGSLCRRPRA*AAAAASLVVVALAR
Trigger: GCGGGCGAGGGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGAGACTGCCATACTGTTTTCCACAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS GCA 90 bp AGGCTCTTACAGATTTTTAACCTGTCGTCGCCCCCGCGCCTGGGCTaGGGCGGCCGCCTCACTGGTCGTAGTCGCCCTCGCCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RLLQIFNLSSPPRLG*GGRLTGRSRPRPPP
Trigger: AGGCGGCGGGCGAGGGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGGTTAAAAATCTGTAAGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000438097.6
ENST00000626793.2
ENST00000628267.2
ENST00000629252.2
ENST00000630424.2
ENST00000638011.1
ENST00000648336.2
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675593.1
CDS GCA 90 bp TTCCAATTTAAGGTATTTACCCTGTCGTCGCCCCCGCGCCTGGGCTaGGGCGGCCGCCTCACTGGTCGTAGTCGCCCTCGCCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: FQFKVFTLSSPPRLG*GGRLTGRSRPRPPP
Trigger: AGGCGGCGGGCGAGGGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGGGTAAATACCTTAAATTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637886.1
CDS CCA 90 bp AGTAATTCCAATTTAAGGTATTTACCCTGTCGTCGCCCCCGCGCCTaGGCTGCGGCGGCCGCCTCACTGGTCGTAGTCGCCCTCGCCCGC +
Preference number: 5 (lower is better)
Translates to: SNSNLRYLPCRRPRA*AAAAASLVVVALAR
Trigger: GCGGGCGAGGGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGGGTAAATACCTTAAATTGGAATTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637886.1
CDS CCA 90 bp AACTACCACAGCCAGGCAGTGCCGTCCACACAGGGATATTCTAAGTaGCCCAGCAGGACTCAACTCTTACTGGCAACAGGCACTGATCTG +
Preference number: 5 (lower is better)
Translates to: NYHSQAVPSTQGYSK*PSRTQLLLATGTDL
Trigger: CAGATCAGTGCCTGTTGCCAGTAAGAGTTGAGTCCTGCTGGGCCACTTAGAATATCCCTGTGTGGACGGCACTGCCTGGCTGTGGTAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS GCA 90 bp CATTCCTCATGTACCACATCCCCCGCAGCTGGCTGCATTCCACTGTaGCAGCACTCTACATTCAGTTACTGGTACTCTCTGGTGCACACT +
Preference number: 5 (lower is better)
Translates to: HSSCTTSPAAGCIPL*QHSTFSYWYSLVHT
Trigger: AGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTGGCACAGTGGAATGCAGCCAGCTGCGGGGGATGTGGTACATGAGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS-3UTR CAA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTAATCTCAGAGCAGGAGTaGTTGGGGGCACCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVISEQE*LGAPFE
Trigger: CTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGAT...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS TCA 90 bp AGAGCAGGAGTTGTTGGGGGCACCTTTCGAGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGAGGGATGAGGATCACAGAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: RAGVVGGTFRVLKVS*ACSFLGGMRITEFC
Trigger: GCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAACTCGAAAGGTGCCCCCAACAACTCCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000628733.2
ENST00000630424.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1
CDS CCA 90 bp CCACACAGGGATATTCTAAGTGGCCCAGCAGGACTCAACTCTTACTaGCAACAGGCACTGATCTGCCATGGTCACTTCATCAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: PHRDILSGPAGLNSY*QQALICHGHFIKST
Trigger: TGTGGACTTGATGAAGTGACCATGGCAGATCAGTGCCTGTTGCCAGTAAGAGTTGAGTCCTGCTGGGCCACTTAGAATATCCCTGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS CCA 90 bp AAAGAGCAGATGAGCACATTCCTCATGTACCACATCCCCCGCAGCTaGCTGCATTCCACTGTGCCAGCACTCTACATTCAGTTACTGGTA +
Preference number: 5 (lower is better)
Translates to: KEQMSTFLMYHIPRS*LHSTVPALYIQLLV
Trigger: TACCAGTAACTGAATGTAGAGTGCTGGCACAGTGGAATGCAGCCAGCTGCGGGGGATGTGGTACATGAGGAATGTGCTCATCTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCACCCAGCGCCACCATCTaGGGAGACACACGGATCTCG +
Preference number: 5 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSPSATI*GDTRIS
Trigger: CGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGG...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACCCCAGCGCCACCATCTaGGGAGACACACGGATCTCG +
Preference number: 5 (lower is better)
Translates to: SIISLYKQASPKVVVSGNPSATI*GDTRIS
Trigger: CGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGG...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCCCAGCGCCACCATCTaGGGAGACACACGGATCTCG +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQPSATI*GDTRIS
Trigger: CGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 5 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: KCTPLCCATTEALEALWGSIGGT*GVDEVF
Trigger: GAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS TCA 90 bp AGAAAAGCAGGGCAGACTATGACTCGTGTCACTTCCTTCCACACGTaGTGCCTTTCATGGGCTCCTGTGTATTCGGCTAGCTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: RKAGQTMTRVTSFHT*CLSWAPVYSASFNV
Trigger: GACATTGAAGCTAGCCGAATACACAGGAGCCCATGAAAGGCATCACGTGTGGAAGGAAGTGACACGAGTCATAGTCTGCCCTGCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS-3UTR CAA 90 bp AGGTTGCTAAGAGTAAATACATTCACCACTGCTGCCAGAAATGACCAACGGTGCTCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: RLLRVNTFTTAARNDQRCSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...GCACCGTTGGTCATTTCTGGCAGCAGTGGTGAATGTATTTACTCTTAGCAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACCCAGCGCCACCATCTaGGGAGACACACGGATCTCG +
Preference number: 5 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAPSATI*GDTRIS
Trigger: CGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000648336.2
CDS GCA 90 bp GAGAAATTGGAACCCTTATTCACTGCTGGTGGGAATGTAAAATGGTaGAGTCACTGTGGAAAACAGTATGGCAGTCTCTGTCGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: EKLEPLFTAGGNVKW*SHCGKQYGSLCRRP
Trigger: GGGGCGACGACAGAGACTGCCATACTGTTTTCCACAGTGACTGCACCATTTTACATTCCCACCAGCAGTGAATAAGGGTTCCAATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTATCTCAGAGCAGGAGTaGTTGGGGGCACCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIISEQE*LGAPFE
Trigger: CTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGAT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 5 (lower is better)
Translates to: KCTPLCCATTEALEALWGEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GCTGCTAAGAATGTCCGGGTGAGTCAGAGGATCAGGACCTGTAAGGGCAGTATAGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 5 (lower is better)
Translates to: AAKNVRVSQRIRTCKGSIEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...TATACTGCCCTTACAGGTCCTGATCCTCTGACTCACCCGGACATTCTTAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTTGCTTGAGACTCTCCTaGCTGGTCCAGAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPICLRLS*LVQSHS
Trigger: ACTGTGGCTCTGGACCAGCAAGGAGAGTCTCAAGCA...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636667.1
CDS CCA 90 bp GCAGCTGGCTGCATTCCACTGTGCCAGCACTCTACATTCAGTTACTaGTACTCTCTGGTGCACACTTACTGGAGAACTGTGTACAATAAA +
Preference number: 5 (lower is better)
Translates to: AAGCIPLCQHSTFSY*YSLVHTYWRTVYNK
Trigger: TTTATTGTACACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTGGCACAGTGGAATGCAGCCAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGATCTCAGAGCAGGAGTaGTTGGGGGCACCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELISEQE*LGAPFE
Trigger: CTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGAT...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACATCTCAGAGCAGGAGTaGTTGGGGGCACCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: SIISLYKQASPKVVVSGNISEQE*LGAPFE
Trigger: CTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGAT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAATCTCAGAGCAGGAGTaGTTGGGGGCACCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPISEQE*LGAPFE
Trigger: CTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGAT...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCAGAACTCCCCATGCTaGAGACTCTCCTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELQNSPC*RLSLLV
Trigger: GACCAGCAAGGAGAGTCTCAAGCATGGGGAGTTCTG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636667.1
CDS-3UTR CAA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTACCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASTQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: KCTPLCCATTEALEALWGMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPISIGGT*GVDEVF
Trigger: GAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSIGGT*GVDEVF
Trigger: GAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SSHLFHYVATLITCLDKMATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TACAGCCATCCCTTGGTATATGTGACAGGGATTGGTTCCAGGACCACGTGTGTAAAATCACACACCCCTTaGGTGAATCAAATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YSHPLVYVTGIGSRTTCVKSHTP*VNQIFL
Trigger: GAGGAAGATTTGATTCACCAAAGGGGTGTGTGATTT...TACACACGTGGTCCTGGAACCAATCCCTGTCACATATACCAAGGGATGGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS TCA 90 bp ATAGCTGCTGTTTTCCAGAAGTTCCAAGACCCAGAGTTGTCTCTATaGATTTTTAAGTGGGAAGAAACTACCACAGCCAGGCAGTGCCGT +
Preference number: 5 (lower is better)
Translates to: IAAVFQKFQDPELSL*IFKWEETTTARQCR
Trigger: ACGGCACTGCCTGGCTGTGGTAGTTTCTTCCCACTTAAAAATTCATAGAGACAACTCTGGGTCTTGGAACTTCTGGAAAACAGCAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS GCA 90 bp TATCCATACGAAGAAAAGTTGGACAGGAAGCACAAAACTCATTCGTaGAGGCTTCATTTCCACAGCCCTCAGTTAACTGGTGGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: YPYEEKLDRKHKTHS*RLHFHSPQLTGGSS
Trigger: GCTACTACCACCAGTTAACTGAGGGCTGTGGAAATGAAGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000628267.2
ENST00000628733.2
ENST00000629252.2
ENST00000629886.2
ENST00000630424.2
ENST00000630607.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1
CDS CCA 90 bp CCCAGCAGGACTCAACTCTTACTGGCAACAGGCACTGATCTGCCATaGTCACTTCATCAAGTCCACAATAATGCAACTCTGAATTTTACA +
Preference number: 5 (lower is better)
Translates to: PSRTQLLLATGTDLP*SLHQVHNNATLNFT
Trigger: TGTAAAATTCAGAGTTGCATTATTGTGGACTTGATGAAGTGACCATGGCAGATCAGTGCCTGTTGCCAGTAAGAGTTGAGTCCTGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS CCA 90 bp GCATTCCACTGTGCCAGCACTCTACATTCAGTTACTGGTACTCTCTaGTGCACACTTACTGGAGAACTGTGTACAATAAAGTCAATGCAG +
Preference number: 5 (lower is better)
Translates to: AFHCASTLHSVTGTL*CTLTGELCTIKSMQ
Trigger: CTGCATTGACTTTATTGTACACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTGGCACAGTGGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGAGATTGCTTCCAAACTaGTATCTCCCAGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGRLLPN*YLPDRR
Trigger: TCTTCTGTCTGGGAGATACAAGTTTGGAAGCAATCT...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AAATGTACCCCATTATGCTGTGCTACCACGGAAGCATTGGAGGCACTTTGGGGGTTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 5 (lower is better)
Translates to: KCTPLCCATTEALEALWGFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...CCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGCACAGCATAATGGGGTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTGCTACCACGGAAGCATaGGAGGCACTTTGGGGGTTG +
Preference number: 5 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGATTEA*EALWGL
Trigger: CAACCCCCAAAGTGCCTCCAATGCTTCCGTGGTAGC...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGGTGACTATGTTTTCTaGACACCATACCTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASGDYVF*TPYLPS
Trigger: TGAGGGGAGGTATGGTGTCAAGAAAACATAGTCACC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS GCA 90 bp TTCCACTGTGCCAGCACTCTACATTCAGTTACTGGTACTCTCTGGTaGACACTTACTGGAGAACTGTGTACAATAAAGTCAATGCAGCTT +
Preference number: 5 (lower is better)
Translates to: FHCASTLHSVTGTLW*TLTGELCTIKSMQL
Trigger: AAGCTGCATTGACTTTATTGTACACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTGGCACAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASVLLDA*QLLASF
Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GTTCTAACAGAATGTCTGTACCGAGGAGGGATGAGTAACATCGGCAAGTTCTGTCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: VLTECLYRGGMSNIGKFCPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...ACAGAACTTGCCGATGTTACTCATCCCTCCTCGGTACAGACATTCTGTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTTCAGAGCAGGAGTTGTaGGGGGCACCTTTCGAGTTC +
Preference number: 5 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGSEQEL*GAPFEF
Trigger: GAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGA...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTATCTCAGAGCAGGAGTaGTTGGGGGCACCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGISEQE*LGAPFE
Trigger: CTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGAT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCAAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ETVHCKTHEDDILWHELFTQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAACACAGGGACTAGTCTaGGGACGACATTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: IVFSTTGAWADGYTDTNATQGLV*GRHFFL
Trigger: GAGGAAGAAATGTCGTCCCAAGACTAGTCCCTGTGT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 5 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGAGGCACTTTGGGGGTaGATGAAGTCTTCATGGATG +
Preference number: 5 (lower is better)
Translates to: ETVHCKTHEDDILWHELFEALWG*MKSSWM
Trigger: CATCCATGAAGACTTCATCAACCCCCAAAGTGCCTC...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGSIGGT*GVDEVF
Trigger: GAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCT...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCAGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC +
Preference number: 5 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSVLLDA*QLLASF
Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELVLLDA*QLLASF
Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQVLLDA*QLLASF
Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AAATGGAAGGTGTGTTTTTGGATTATACAGTGGCTCATGGAAGGGTGGGAGGGGTTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 5 (lower is better)
Translates to: KWKVCFWIIQWLMEGWEGFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...CCCCTCCCACCCTTCCATGAGCCACTGTATAATCCAAAAACACACCTTCCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TCTATCATCTCCCTATACAAGCAAGCATCCCCAAAAGTAGTTGTCTCAGGAAACAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: SIISLYKQASPKVVVSGNKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...GTTTCCTGAGACAACTACTTTTGGGGATGCTTGCTTGTATAGGGAGATGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGAGCATTGGAGGCACTTaGGGGGTTGATGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: SSHLFHYVATLITCLDKMSIGGT*GVDEVF
Trigger: GAAGACTTCATCAACCCCCAAAGTGCCTCCAATGCT...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCATTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TCACCTTTGAAACTCAGAACAGGTAGCAGCACAGAGGTTGCTAAGAGTAAATACACATACAGCCATCCCTaGGTATATGTGACAGGGATT +
Preference number: 5 (lower is better)
Translates to: SPLKLRTGSSTEVAKSKYTYSHP*VYVTGI
Trigger: AATCCCTGTCACATATACCAAGGGATGGCTGTATGT...GTATTTACTCTTAGCAACCTCTGTGCTGCTACCTGTTCTGAGTTTCAAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS TCA 90 bp TCGTGGCCTCAAGTGACTCTCTCACCTCTGCCTTATATTTCCGTTTaGGCTGTTATTATCAACTGGAGTAACATTTCTAGTTGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: SWPQVTLSPLPYISV*AVIINWSNISSWGK
Trigger: TTTTCCCCAACTAGAAATGTTACTCCAGTTGATAATAACAGCTCAAACGGAAATATAAGGCAGAGGTGAGAGAGTCACTTGAGGCCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676452.1
CDS CCA 90 bp GAGGGCTTTAATAGCTGCTGCATTATTATCCATACGAAGAAAAGTTaGACAGGAAGCACAAAACTCATTCGTGCAGGCTTCATTTCCACA +
Preference number: 5 (lower is better)
Translates to: EGFNSCCIIIHTKKS*TGSTKLIRAGFIST
Trigger: TGTGGAAATGAAGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATAATAATGCAGCAGCTATTAAAGCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 21 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000628733.2
ENST00000629886.2
ENST00000630424.2
ENST00000630607.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1
CDS CCA 90 bp CAGCACTCTACATTCAGTTACTGGTACTCTCTGGTGCACACTTACTaGAGAACTGTGTACAATAAAGTCAATGCAGCTTCCACATTATAC +
Preference number: 5 (lower is better)
Translates to: QHSTFSYWYSLVHTY*RTVYNKVNAASTLY
Trigger: GTATAATGTGGAAGCTGCATTGACTTTATTGTACACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGAGATTGCTTCCAAACTaGTATCTCCCAGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQRLLPN*YLPDRR
Trigger: TCTTCTGTCTGGGAGATACAAGTTTGGAAGCAATCT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHVLLDA*QLLASF
Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CCTTTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: PFTVISTPHLHQNLAVPIMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...AATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGAGGGGAGAAAAGACTaGGGACTCTGTACTTGTAAA +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHEGRKD*GLCTCK
Trigger: TTTACAAGTACAGAGTCCCAAGTCTTTTCTCCCCTC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCAGTAGCAGCACAGAGGTaGCTAAGAGTAAATACATTC +
Preference number: 5 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSVAAQR*LRVNTF
Trigger: GAATGTATTTACTCTTAGCAACCTCTGTGCTGCTAC...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCAACTCTTGAGGATGAGTaGGAAGCTACTTTATCTGTC +
Preference number: 5 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSTLEDE*EATLSV
Trigger: GACAGATAAAGTAGCTTCCAACTCATCCTCAAGAGT...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGAAAGATGCAGAGAAATaGGAACCCTTATTCACTGCT +
Preference number: 5 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGKDAEK*EPLFTA
Trigger: AGCAGTGAATAAGGGTTCCAATTTCTCTGCATCTTT...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS TCA 90 bp GTACCTAGAGATAAAGGTCTGAAGCAAAATCACACACCCCTTTGGTaGATCAAATCTTCCTCTGAAGAACTAAGTACCTCACCTAATCAG +
Preference number: 5 (lower is better)
Translates to: VPRDKGLKQNHTPLW*IKSSSEELSTSPNQ
Trigger: CTGATTAGGTGAGGTACTTAGTTCTTCAGAGGAAGATTTGATTCACCAAAGGGGTGTGTGATTTTGCTTCAGACCTTTATCTCTAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTAGATTGCTTCCAAACTaGTATCTCCCAGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: ETVHCKTHEDDILWHELFRLLPN*YLPDRR
Trigger: TCTTCTGTCTGGGAGATACAAGTTTGGAAGCAATCT...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR CAA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCGTAAGTACCCCAAGATaGCTTCCAAACTTGTATCTC +
Preference number: 5 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGVSTPR*LPNLYL
Trigger: GAGATACAAGTTTGGAAGCAATCTTGGGGTACTTAC...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438097.6
ENST00000638155.1
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACGTAAGTACCCCAAGATaGCTTCCAAACTTGTATCTC +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHVSTPR*LPNLYL
Trigger: GAGATACAAGTTTGGAAGCAATCTTGGGGTACTTAC...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000638155.1
CDS-3UTR CAA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTC +
Preference number: 5 (lower is better)
Translates to: FHYVATLITCLDKMADSTVLLDA*QLLASF
Trigger: GAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: ETVHCKTHEDDILWHELFPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp CACCTGCATCAAAATCTTGCAGTGCCTATTAATAAATGCCAACCCACTAACGGGTTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 5 (lower is better)
Translates to: HLHQNLAVPINKCQPTNGFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...CCCGTTAGTGGGTTGGCATTTATTAATAGGCACTGCAAGATTTTGATGCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: FHYVATLITCLDKMADSTKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACTACCATGCATTAGTAGCCTTTCACAGTGATATCTACCCCACACCTGCATCATCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: NYHALVAFHSDIYPTPASSSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...TGATGCAGGTGTGGGGTAGATATCACTGTGAAAGGCTACTAATGCATGGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACAGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: FHYVATLITCLDKMADSTAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: SSHLFHYVATLITCLDKMFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GAAATGTGGAAAGAGTATCAAGAGGAGACCCTAAGACACTCTGTAAGAATCCCAGCTATCTGTATACATTaGTCAGTGCCTCTAGTTGTA +
Preference number: 5 (lower is better)
Translates to: EMWKEYQEETLRHSVRIPAICIH*SVPLVV
Trigger: TACAACTAGAGGCACTGACAAATGTATACAGATAGC...TGGGATTCTTACAGAGTGTCTTAGGGTCTCCTCTTGATACTCTTTCCACATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS TCA 90 bp CTCTGCGATAATGCACCTGAGACAAATGTAAATTTTGGTGAAATGTaGCTGACGACTGCTTTCTGTCTTCTGGCCACTCTTATATTCTTA +
Preference number: 5 (lower is better)
Translates to: LCDNAPETNVNFGEM*LTTAFCLLATLIFL
Trigger: TAAGAATATAAGAGTGGCCAGAAGACAGAAAGCAGTCGTCAGTCACATTTCACCAAAATTTACATTTGTCTCAGGTGCATTATCGCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCACACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTCCTCGAAGGGGCCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: FLPLTVCMEFLRKIPRRGHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...GCCCCTTCGAGGAATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTTTTGCTCTTCCTTATaGTTCAGGGACATTCCATTA +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQFCSSL*FRDIPL
Trigger: TAATGGAATGTCCCTGAACAATAAGGAAGAGCAAAA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AACAAGAAAAAGATGTCTGCTCTTGTCACTTCTATCCAATATTGTACTGGAGGTAAGGTCCAGAAAAGTTaGGCTGCAGGCTGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NKKKMSALVTSIQYCTGGKVQKS*AAGCFH
Trigger: ATGAAAACAGCCTGCAGCCAAACTTTTCTGGACCTT...ACCTCCAGTACAATATTGGATAGAAGTGACAAGAGCAGACATCTTTTTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp ACTGAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: TETVHCKTHEDDILWHELSSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...CAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTTTCCCCAGTCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: FVAIGLTTISFGQMHFPQSSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...CTGGGGAAAGTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp ATAGTCTTTTCAACAACTGGTGCTTGGGCAGATGGATATACAGATACCAATGCAATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: IVFSTTGAWADGYTDTNAMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...TGCATTGGTATCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAAAAGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTCACAGTGATATCTACCCCACACCTGCATCAAAATCTTGCAGTGCCTATTAATATGGAAGGTGTGTTTTaGGATTATACAGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: FTVISTPHLHQNLAVPINMEGVF*DYTVAH
Trigger: ATGAGCCACTGTATAATCCAAAAACACACCTTCCAT...ATTAATAGGCACTGCAAGATTTTGATGCAGGTGTGGGGTAGATATCACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATGCAAAAGATATGGGATaGGGGAAGAATCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: SWDDISSSDSLYGILEKNAKDMG*GKNLWE
Trigger: CTCCCAAAGATTCTTCCCCAATCCCATATCTTTTGC...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATTTCAACAACTGGTGCTaGGGCAGATGGATATACAGA +
Preference number: 5 (lower is better)
Translates to: SWDDISSSDSLYGILEKNFNNWC*GRWIYR
Trigger: TCTGTATATCCATCTGCCCAAGCACCAGTTGTTGAA...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp CAAAAAGTGCTTGATCCTGGGAAGCCATGTAACAGTTCACAAATGCAGAGTTCACTATGTCTTTCAGAATaGGATGATGTAGTACACAGA +
Preference number: 5 (lower is better)
Translates to: QKVLDPGKPCNSSQMQSSLCLSE*DDVVHR
Trigger: TCTGTGTACTACATCATCCAATTCTGAAAGACATAG...TGAACTCTGCATTTGTGAACTGTTACATGGCTTCCCAGGATCAAGCACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS-3UTR CAA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: SSHLFHYVATLITCLDKMVLLDA*QLLASF
Trigger: AAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAAC...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS TCA 90 bp AGAAAATATGATCACAAAACACCCACTAATCTGAATACTGCAGCATaGGCTAGCAAATTCAAATGGTGGCTCACTTCCAATAACACTGGT +
Preference number: 5 (lower is better)
Translates to: RKYDHKTPTNLNTAA*ASKFKWWLTSNNTG
Trigger: ACCAGTGTTATTGGAAGTGAGCCACCATTTGAATTTGCTAGCTCATGCTGCAGTATTCAGATTAGTGGGTGTTTTGTGATCATATTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000630607.2
ENST00000675593.1
CDS-3UTR CAA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATCCATACGAAGAAAAGTaGGACAGGAAGCACAAAACT +
Preference number: 5 (lower is better)
Translates to: SWDDISSSDSLYGILEKNPYEEK*DRKHKT
Trigger: AGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGG...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACATTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: FHYVATLITCLDKMADSTFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp AGTAGCCATCTTTTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGTTTGTTGCAATAGGCTaGACTACCATTTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: SSHLFHYVATLITCLDKMFVAIG*TTISFG
Trigger: GCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAA...CATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAAAAGATGGCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp TTTCATTATGTTGCAACACTGATCACGTGCCTCGATAAAATGGCTGATTCAACACACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: FHYVATLITCLDKMADSTHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...TGTTGAATCAGCCATTTTATCGAGGCACGTGATCAGTGTTGCAACATAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000438097.6
ENST00000630424.2
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS-3UTR CAA 90 bp CTTCCTAACTTTGTTGCAATAGGCTTGACTACCATTTCATTTGGCCAAATGCACTCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: LPNFVAIGLTTISFGQMHSSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...GTGCATTTGGCCAAATGAAATGGTAGTCAAGCCTATTGCAACAAAGTTAGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp GAAACAGTTCATTGCAAGACACATGAAGACGACATACTGTGGCATGAGTTGTTTTCTTCCTCTGACAGTTaGTATGGAATTCTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: ETVHCKTHEDDILWHELFSSSDS*YGILEK
Trigger: TTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGA...AAACAACTCATGCCACAGTATGTCGTCTTCATGTGTCTTGCAATGAACTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS-3UTR CAA 90 bp AGAGAGGACATCAGTAAATGCACTTTAGAGGTTAGGTCACTGAGAAGTCAAGTAGCTCCTATTTTTAGATaGTATATAGTTGAGACGGTC +
Preference number: 5 (lower is better)
Translates to: REDISKCTLEVRSLRSQVAPIFR*YIVETV
Trigger: GACCGTCTCAACTATATACAATCTAAAAATAGGAGC...TACTTGACTTCTCAGTGACCTAACCTCTAAAGTGCATTTACTGATGTCCTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635914.1
CDS-3UTR CAA 90 bp TCTTGGGACGACATTTCTTCCTCTGACAGTTTGTATGGAATTCTTGAGAAAAATCACGAAGGGGAGACTTaGGATTGTCTATTTAAAATC +
Preference number: 5 (lower is better)
Translates to: SWDDISSSDSLYGILEKNHEGET*DCLFKI
Trigger: GATTTTAAATAGACAATCCAAAGTCTCCCCTTCGTG...ATTTTTCTCAAGAATTCCATACAAACTGTCAGAGGAAGAAATGTCGTCCCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000438097.6
ENST00000635914.1
ENST00000636667.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
CDS GCA 90 bp ATTTTATGGTATGGTTTTACTGTACCATTACTCCCAGTTCAAGACTaGACATCCACACTTATTATTGGGTATCTCCACATTTCTCTTGTT +
Preference number: 5 (lower is better)
Translates to: ILWYGFTVPLLPVQD*TSTLIIGYLHISLV
Trigger: AACAAGAGAAATGTGGAGATACCCAATAATAAGTGTGGATGTGCAGTCTTGAACTGGGAGTAATGGTACAGTAAAACCATACCATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS GCA 72 bp GCCGCCTCCGCCCGCCACCGCCTCGTTCTCTTTCGCTaGCGCCACCGCCGGGGCTCATGCGGGACCCGCGCT +
Preference number: 6 (lower is better)
Translates to: AASARHRLVLFR*RHRRGSCGTRA
Trigger: AGCGCGGGTCCCGCATGAGCCCCGGCGGTGGCGGCAGCGAAAGAGAACGAGGCGGTGGCGGGCGGAGGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000438097.6
ENST00000625681.2
ENST00000625778.3
ENST00000628267.2
ENST00000629252.2
ENST00000630424.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675593.1
CDS CCA 72 bp AGTAGGCGGCGGATGGCGGGCGCCCGCGCTGGCGGATaGCTACGCGGCGGAGGGGTGCGCGAGCGAGCGAAG +
Preference number: 6 (lower is better)
Translates to: SRRRMAGARAGG*LRGGGVRERAK
Trigger: CTTCGCTCGCTCGCGCACCCCTCCGCCGCGTAGCCATCCGCCAGCGCGGGCGCCCGCCATCCGCCGCCTACT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000438097.6
ENST00000625681.2
ENST00000625778.3
ENST00000628267.2
ENST00000629252.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675593.1
CDS CCA 72 bp ACTGAGGTTCTCCTGATCTGTCGTCGCCCCCGCGCCTaGGCTGCGGCGGCCGCCTCACTGGTCGTAGTCGCC +
Preference number: 6 (lower is better)
Translates to: TEVLLICRRPRA*AAAAASLVVVA
Trigger: GGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGATCAGGAGAACCTCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625778.3
ENST00000635914.1
ENST00000649550.1
CDS CAA 90 bp GGCCCCGTCGTCTCCTGTAGTCACCCCGAGCCCAGCGCCACCATCTaGGGAGACACACGGATCTCGCGGCCGCGGCGCAAGACGGGAGGA +
Preference number: 6 (lower is better)
Translates to: GPVVSCSHPEPSATI*GDTRISRPRRKTGG
Trigger: TCCTCCCGTCTTGCGCCGCGGCCGCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGGCTCGGGGTGACTACAGGAGACGACGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000625778.3
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS CCA 72 bp AAACAGTATGGCAGTCTCTGTCGTCGCCCCCGCGCCTaGGCTGCGGCGGCCGCCTCACTGGTCGTAGTCGCC +
Preference number: 6 (lower is better)
Translates to: KQYGSLCRRPRA*AAAAASLVVVA
Trigger: GGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGAGACTGCCATACTGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS CCA 72 bp CTTCCCTGTCTGGGGCCCCGGCTGGCTCGAAGAGCCTaGCTCCTAGGAGGCCCAAATCTCGACGCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: LPCLGPRLARRA*LLGGPNLDASH
Trigger: GTGCGAGGCGTCGAGATTTGGGCCTCCTAGGAGCCAGGCTCTTCGAGCCAGCCGGGGCCCCAGACAGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627018.1
ENST00000630907.2
CDS CAA 72 bp GTCTCCTGTAGTCACCCCGAGCCCAGCGCCACCATCTaGGGAGACACACGGATCTCGCGGCCGCGGCGCAAG +
Preference number: 6 (lower is better)
Translates to: VSCSHPEPSATI*GDTRISRPRRK
Trigger: CTTGCGCCGCGGCCGCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGGCTCGGGGTGACTACAGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000625778.3
ENST00000628267.2
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS CCA 72 bp GGTGCGCGAGCGAGCGAAGCCTGGTGTGTCGGGTCCTaGCGAAGGGAAAAGGCCCCGTCGTCTCCTGTAGTC +
Preference number: 6 (lower is better)
Translates to: GARASEAWCVGS*RREKAPSSPVV
Trigger: GACTACAGGAGACGACGGGGCCTTTTCCCTTCGCCAGGACCCGACACACCAGGCTTCGCTCGCTCGCGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000438097.6
ENST00000625681.2
ENST00000625778.3
ENST00000628267.2
ENST00000629252.2
ENST00000635914.1
ENST00000637886.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675593.1
CDS CCA 72 bp TCTCCTGTAGTCACCCCGAGCCCAGCGCCACCATCTTaGGAGACACACGGATCTCGCGGCCGCGGCGCAAGA +
Preference number: 6 (lower is better)
Translates to: SPVVTPSPAPPS*ETHGSRGRGAR
Trigger: TCTTGCGCCGCGGCCGCGAGATCCGTGTGTCTCCCAAGATGGTGGCGCTGGGCTCGGGGTGACTACAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000625778.3
ENST00000628267.2
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
CDS CCA 72 bp TCTTACAGATTTTTAACCTGTCGTCGCCCCCGCGCCTaGGCTGCGGCGGCCGCCTCACTGGTCGTAGTCGCC +
Preference number: 6 (lower is better)
Translates to: SYRFLTCRRPRA*AAAAASLVVVA
Trigger: GGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGGTTAAAAATCTGTAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000438097.6
ENST00000626793.2
ENST00000628267.2
ENST00000629252.2
ENST00000630424.2
ENST00000638011.1
ENST00000648336.2
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675593.1
CDS CCA 72 bp AATTTAAGGTATTTACCCTGTCGTCGCCCCCGCGCCTaGGCTGCGGCGGCCGCCTCACTGGTCGTAGTCGCC +
Preference number: 6 (lower is better)
Translates to: NLRYLPCRRPRA*AAAAASLVVVA
Trigger: GGCGACTACGACCAGTGAGGCGGCCGCCGCAGCCCAGGCGCGGGGGCGACGACAGGGTAAATACCTTAAATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637886.1
CDS CAA 72 bp CAGTTAACTGGTGGTAGTAGCGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCCTGTCGTCGCCCCCGCGCC +
Preference number: 6 (lower is better)
Translates to: QLTGGSSVLLDA*QLLASCRRPRA
Trigger: GGCGCGGGGGCGACGACAGGAAGCGAGCAGCTGCAAAGCATCTAATAGAACGCTACTACCACCAGTTAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675177.1
CDS CCA 72 bp CAACATGATGAAACCTCGTCTCTTAGCCGGGTGTGGTaGTGGGTGCCTTTAGTCCCAGCAACTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: QHDETSSLSRVW*WVPLVPATWEA
Trigger: AGCCTCCCAAGTTGCTGGGACTAAAGGCACCCACCACCACACCCGGCTAAGAGACGAGGTTTCATCATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000630607.2
ENST00000675593.1
CDS TCA 72 bp GCTCGCTTCATTCGGCTAGCTTCAATGTCGTCAGACTaGGGTTCTCCTGATCTGGTCTCCACCAGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: ARFIRLASMSSD*GSPDLVSTSLV
Trigger: CACAAGGCTGGTGGAGACCAGATCAGGAGAACCTCAGTCTGACGACATTGAAGCTAGCCGAATGAAGCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000629252.2
ENST00000630424.2
ENST00000630607.2
ENST00000638155.1
ENST00000675593.1
CDS TCA 72 bp GGGCAGACTATGACTCGTGTCACTTCCTTCCACACGTaGTGCCTTTCATGGGCTCCTGTGTATTCGGCTAGC +
Preference number: 6 (lower is better)
Translates to: GQTMTRVTSFHT*CLSWAPVYSAS
Trigger: GCTAGCCGAATACACAGGAGCCCATGAAAGGCATCACGTGTGGAAGGAAGTGACACGAGTCATAGTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS GCA 72 bp GCACATTCCTCATGTACCACATCCCCCGCAGCTGGCTaGATTCCACTGTGCCAGCACTCTACATTCAGTTAC +
Preference number: 6 (lower is better)
Translates to: AHSSCTTSPAAG*IPLCQHSTFSY
Trigger: GTAACTGAATGTAGAGTGCTGGCACAGTGGAATGCAGCCAGCTGCGGGGGATGTGGTACATGAGGAATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS CCA 72 bp ATGAGCACATTCCTCATGTACCACATCCCCCGCAGCTaGCTGCATTCCACTGTGCCAGCACTCTACATTCAG +
Preference number: 6 (lower is better)
Translates to: MSTFLMYHIPRS*LHSTVPALYIQ
Trigger: CTGAATGTAGAGTGCTGGCACAGTGGAATGCAGCCAGCTGCGGGGGATGTGGTACATGAGGAATGTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS TCA 72 bp GTTGTTGGGGGCACCTTTCGAGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTCTTGGAGGGATGAGGATCACA +
Preference number: 6 (lower is better)
Translates to: VVGGTFRVLKVS*ACSFLGGMRIT
Trigger: TGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAGAACTCGAAAGGTGCCCCCAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000628733.2
ENST00000630424.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1
CDS TCA 72 bp GTTGTTGGGGGCACCTTTCGAGTTCTCAAGGTAAGCTaGGCTTGCTCCTTTATTCGGCTAGCTTCAATGTCG +
Preference number: 6 (lower is better)
Translates to: VVGGTFRVLKVS*ACSFIRLASMS
Trigger: CGACATTGAAGCTAGCCGAATAAAGGAGCAAGCTCAGCTTACCTTGAGAACTCGAAAGGTGCCCCCAACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626793.2
CDS GCA 72 bp ATTTTTAAGTGGGAAGAAACTACCACAGCCAGGCAGTaGCGTCCACACAGGGATATTCTAAGTGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: IFKWEETTTARQ*RPHRDILSGPA
Trigger: TGCTGGGCCACTTAGAATATCCCTGTGTGGACGGCACTGCCTGGCTGTGGTAGTTTCTTCCCACTTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS CCA 72 bp GATATTCTAAGTGGCCCAGCAGGACTCAACTCTTACTaGCAACAGGCACTGATCTGCCATGGTCACTTCATC +
Preference number: 6 (lower is better)
Translates to: DILSGPAGLNSY*QQALICHGHFI
Trigger: GATGAAGTGACCATGGCAGATCAGTGCCTGTTGCCAGTAAGAGTTGAGTCCTGCTGGGCCACTTAGAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS TCA 72 bp GCTCGCTTCATTCGGCTAGCTTCAATGTCGTCAGACTaGGGTTCTCCTGATCTTTTACAAGCTGTGGCCATT +
Preference number: 6 (lower is better)
Translates to: ARFIRLASMSSD*GSPDLLQAVAI
Trigger: AATGGCCACAGCTTGTAAAAGATCAGGAGAACCTCAGTCTGACGACATTGAAGCTAGCCGAATGAAGCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000628733.2
ENST00000628890.1
ENST00000629886.2
ENST00000630907.2
ENST00000637886.1
ENST00000648336.2
ENST00000675000.1
CDS CCA 72 bp TGCATTCCACTGTGCCAGCACTCTACATTCAGTTACTaGTACTCTCTGGTGCACACTTACTGGAGAACTGTG +
Preference number: 6 (lower is better)
Translates to: CIPLCQHSTFSY*YSLVHTYWRTV
Trigger: CACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTGGCACAGTGGAATGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS TCA 72 bp CTCCTGTGTATTCGGCTAGCTTCAATGTCGTCAGACTaGGGTTCTCCTGATCTTTTACAAGCTGTGGCCATT +
Preference number: 6 (lower is better)
Translates to: LLCIRLASMSSD*GSPDLLQAVAI
Trigger: AATGGCCACAGCTTGTAAAAGATCAGGAGAACCTCAGTCTGACGACATTGAAGCTAGCCGAATACACAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS TCA 72 bp AAGAAACTAAAAGCAGCCTGTGTGGTAAGATGGTACTaGCCAAAGGGGAATGCACAGGAAGGTAAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: KKLKAACVVRWY*PKGNAQEGKAQ
Trigger: CTGAGCCTTACCTTCCTGTGCATTCCCCTTTGGTCAGTACCATCTTACCACACAGGCTGCTTTTAGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676452.1
CDS GCA 72 bp GCAGGACTCAACTCTTACTGGCAACAGGCACTGATCTaGCATGGTCACTTCATCAAGTCCACAATAATGCAA +
Preference number: 6 (lower is better)
Translates to: AGLNSYWQQALI*HGHFIKSTIMQ
Trigger: TTGCATTATTGTGGACTTGATGAAGTGACCATGGCAGATCAGTGCCTGTTGCCAGTAAGAGTTGAGTCCTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS TCA 72 bp TGCTCCTTTATTCGGCTAGCTTCAATGTCGTCAGACTaGGGTTCTCCTGATCTTTTACAAGCTGTGGCCATT +
Preference number: 6 (lower is better)
Translates to: CSFIRLASMSSD*GSPDLLQAVAI
Trigger: AATGGCCACAGCTTGTAAAAGATCAGGAGAACCTCAGTCTGACGACATTGAAGCTAGCCGAATAAAGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626793.2
CDS CCA 72 bp CTTTCTTGTTCATTTTTATCTCAGAGCAGGAGTTGTTaGGGGCACCTTTCGAGTTCTCAAGGTAAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LSCSFLSQSRSC*GHLSSSQGKLS
Trigger: GCTCAGCTTACCTTGAGAACTCGAAAGGTGCCCCCAACAACTCCTGCTCTGAGATAAAAATGAACAAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 20 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000626793.2
ENST00000628733.2
ENST00000630424.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1
CDS CCA 72 bp ACTCAACTCTTACTGGCAACAGGCACTGATCTGCCATaGTCACTTCATCAAGTCCACAATAATGCAACTCTG +
Preference number: 6 (lower is better)
Translates to: TQLLLATGTDLP*SLHQVHNNATL
Trigger: CAGAGTTGCATTATTGTGGACTTGATGAAGTGACCATGGCAGATCAGTGCCTGTTGCCAGTAAGAGTTGAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS CAA 72 bp GCCTTGTGGGTAAGTACCCCAAGATTGCTTCCAAACTaGTATCTCCCAGACAGAAGAGTTCCAATAACACTG +
Preference number: 6 (lower is better)
Translates to: ALWVSTPRLLPN*YLPDRRVPITL
Trigger: CAGTGTTATTGGAACTCTTCTGTCTGGGAGATACAAGTTTGGAAGCAATCTTGGGGTACTTACCCACAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428984.6
CDS TCA 72 bp ATTGATGATAACCCCATGTACCAGCTGACTCATTTTTaGAAGTGCGACCCTCCAGCATCAGATGTCATACTG +
Preference number: 6 (lower is better)
Translates to: IDDNPMYQLTHF*KCDPPASDVIL
Trigger: CAGTATGACATCTGATGCTGGAGGGTCGCACTTTCAAAAATGAGTCAGCTGGTACATGGGGTTATCATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000438097.6
ENST00000566215.5
ENST00000629252.2
ENST00000630424.2
ENST00000630607.2
ENST00000675593.1
CDS CCA 72 bp TGTGCCAGCACTCTACATTCAGTTACTGGTACTCTCTaGTGCACACTTACTGGAGAACTGTGTACAATAAAG +
Preference number: 6 (lower is better)
Translates to: CASTLHSVTGTL*CTLTGELCTIK
Trigger: CTTTATTGTACACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGTAGAGTGCTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS TCA 72 bp ATTGATGATAACCCCATGTACCAGCTGACTCATTTTTaGAAGTGCGACCCTCCAGCATCAGATGTCATATTC +
Preference number: 6 (lower is better)
Translates to: IDDNPMYQLTHF*KCDPPASDVIF
Trigger: GAATATGACATCTGATGCTGGAGGGTCGCACTTTCAAAAATGAGTCAGCTGGTACATGGGGTTATCATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638155.1
CDS TCA 72 bp GTTTTCCAGAAGTTCCAAGACCCAGAGTTGTCTCTATaGATTTTTAAGTGGGAAGAAACTACCACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: VFQKFQDPELSL*IFKWEETTTAR
Trigger: CCTGGCTGTGGTAGTTTCTTCCCACTTAAAAATTCATAGAGACAACTCTGGGTCTTGGAACTTCTGGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS CCA 72 bp ACATTCAGTTACTGGTACTCTCTGGTGCACACTTACTaGAGAACTGTGTACAATAAAGTCAATGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: TFSYWYSLVHTY*RTVYNKVNAAS
Trigger: GGAAGCTGCATTGACTTTATTGTACACAGTTCTCCAGTAAGTGTGCACCAGAGAGTACCAGTAACTGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS CAA 90 bp CTGTACCATTACTCCCAGTTCAAGACTGCACATCCACACTTATTATaGGGTATCTCCACATTTCTCTTGTTCTGGTCTTTGTCCAACACT +
Preference number: 6 (lower is better)
Translates to: LYHYSQFKTAHPHLL*GISTFLLFWSLSNT
Trigger: AGTGTTGGACAAAGACCAGAACAAGAGAAATGTGGAGATACCCAATAATAAGTGTGGATGTGCAGTCTTGAACTGGGAGTAATGGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS TCA 72 bp GATCACAAAACACCCACTAATCTGAATACTGCAGCATaGGCTAGCAAATTCAAATGGTGGCTCACTTCCAAT +
Preference number: 6 (lower is better)
Translates to: DHKTPTNLNTAA*ASKFKWWLTSN
Trigger: ATTGGAAGTGAGCCACCATTTGAATTTGCTAGCTCATGCTGCAGTATTCAGATTAGTGGGTGTTTTGTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000630607.2
ENST00000675593.1
CDS CCA 72 bp AATAGCTGCTGCATTATTATCCATACGAAGAAAAGTTaGACAGGAAGCACAAAACTCATTCGTGCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: NSCCIIIHTKKS*TGSTKLIRAGF
Trigger: GAAGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCTTCGTATGGATAATAATGCAGCAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000628267.2
ENST00000628733.2
ENST00000629252.2
ENST00000629886.2
ENST00000630424.2
ENST00000630607.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1
CDS CCA 72 bp ACTCCCAGTTCAAGACTGCACATCCACACTTATTATTaGGTATCTCCACATTTCTCTTGTTCTGGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: TPSSRLHIHTYY*VSPHFSCSGLC
Trigger: ACAAAGACCAGAACAAGAGAAATGTGGAGATACCCAATAATAAGTGTGGATGTGCAGTCTTGAACTGGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS TCA 72 bp GATAAAGGTCTGAAGCAAAATCACACACCCCTTTGGTaGATCAAATCTTCCTCTGAAGAACTAAGTACCTCA +
Preference number: 6 (lower is better)
Translates to: DKGLKQNHTPLW*IKSSSEELSTS
Trigger: TGAGGTACTTAGTTCTTCAGAGGAAGATTTGATTCACCAAAGGGGTGTGTGATTTTGCTTCAGACCTTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625778.3
CDS CAA 72 bp CAGTTAACTGGTGGTAGTAGCGTTCTATTAGATGCTTaGCAGCTGCTCGCTTCATTTGAAACAGAAGATATA +
Preference number: 6 (lower is better)
Translates to: QLTGGSSVLLDA*QLLASFETEDI
Trigger: TATATCTTCTGTTTCAAATGAAGCGAGCAGCTGCAAAGCATCTAATAGAACGCTACTACCACCAGTTAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638011.1
CDS TCA 72 bp CAAGTGACTCTCTCACCTCTGCCTTATATTTCCGTTTaGGCTGTTATTATCAACTGGAGTAACATTTCTAGT +
Preference number: 6 (lower is better)
Translates to: QVTLSPLPYISV*AVIINWSNISS
Trigger: ACTAGAAATGTTACTCCAGTTGATAATAACAGCTCAAACGGAAATATAAGGCAGAGGTGAGAGAGTCACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676452.1
CDS TCA 72 bp CATAAAGCATTCCTACTGGTCAACAATTCTACAATCTaGAAACAGGGACATCTGTACCATATAGTCCCAATG +
Preference number: 6 (lower is better)
Translates to: HKAFLLVNNSTI*KQGHLYHIVPM
Trigger: CATTGGGACTATATGGTACAGATGTCCCTGTTTTCAGATTGTAGAATTGTTGACCAGTAGGAATGCTTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676452.1
CDS GCA 72 bp TATGGTTTTACTGTACCATTACTCCCAGTTCAAGACTaGACATCCACACTTATTATTGGGTATCTCCACATT +
Preference number: 6 (lower is better)
Translates to: YGFTVPLLPVQD*TSTLIIGYLHI
Trigger: AATGTGGAGATACCCAATAATAAGTGTGGATGTGCAGTCTTGAACTGGGAGTAATGGTACAGTAAAACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675000.1
CDS CAA 90 bp ACTCTCAGGCCCACTATTCTTAGCAGTATTCCTGCCAACTATACATaGTCTTCATTTTTACAGTATGTATTTCACTTTACAATGACAGCC +
Preference number: 6 (lower is better)
Translates to: TLRPTILSSIPANYT*SSFLQYVFHFTMTA
Trigger: GGCTGTCATTGTAAAGTGAAATACATACTGTAAAAATGAAGACAATGTATAGTTGGCAGGAATACTGCTAAGAATAGTGGGCCTGAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675593.1
CDS CAA 72 bp AACATCTTACCTTTAAAATCAATTCTAGCGCCTTTCTaGTTCATTTTTATCTCAGAGCAGGAGTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: NILPLKSILAPF*FIFISEQELLG
Trigger: CCCCAACAACTCCTGCTCTGAGATAAAAATGAACAAGAAAGGCGCTAGAATTGATTTTAAAGGTAAGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675038.1
CDS GCA 72 bp TGCATTAATCTTATAAAGCTCGAGGGCTTTAATAGCTaGTGCATTATTATCCATACGAAGAAAAGTTGGACA +
Preference number: 6 (lower is better)
Translates to: CINLIKLEGFNS*CIIIHTKKSWT
Trigger: TGTCCAACTTTTCTTCGTATGGATAATAATGCAGCAGCTATTAAAGCCCTCGAGCTTTATAAGATTAATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000428984.6
ENST00000438097.6
ENST00000566215.5
ENST00000625778.3
ENST00000626068.2
ENST00000628733.2
ENST00000629886.2
ENST00000630424.2
ENST00000630607.2
ENST00000630907.2
ENST00000635914.1
ENST00000637886.1
ENST00000638011.1
ENST00000638155.1
ENST00000648336.2
ENST00000649550.1
ENST00000650110.1
ENST00000675000.1
ENST00000675038.1
ENST00000675177.1
ENST00000675593.1