RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2Z (Homo sapiens)

Ensembl gene IDs: ENSG00000159202

Ensembl transcript IDs: ENST00000360943.10, ENST00000504684.5, ENST00000506271.1, ENST00000506498.5, ENST00000508468.2, ENST00000511373.1, ENST00000513342.5, ENST00000514948.1

Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGACCGGGAACAGGCCCCCACTCCCACACCCTGGGATCGGAGCTTaGTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: QTGNRPPLPHPGIGA*LVLAILQDDFESGG
Trigger: CCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCTGTTCCCGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 90 bp CCGGGAACAGGCCCCCACTCCCACACCCTGGGATCGGAGCTTGCTTaGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAGGGAGAT +
Preference number: 1 (lower is better)
Translates to: PGTGPHSHTLGSELA*FLPSCRMTSSLEGD
Trigger: ATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCTGTTCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 90 bp CGCTCTAGGTGCTCCTGTAAAGGTACCTTGGCCCCTGATACGGGATaGATGGATGAACGAAGCCCCAGATGCTCCAGTGCCAAGGAGGTC +
Preference number: 1 (lower is better)
Translates to: RSRCSCKGTLAPDTG*MDERSPRCSSAKEV
Trigger: GACCTCCTTGGCACTGGAGCATCTGGGGCTTCGTTCATCCATTCATCCCGTATCAGGGGCCAAGGTACCTTTACAGGAGCACCTAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 90 bp CACTCCCACACCCTGGGATCGGAGCTTGCTTGGTTCTTGCCATCTTaGAGGATGACTTCGAGTCTGGAGGGAGATACACAGTGCCTCTCC +
Preference number: 1 (lower is better)
Translates to: HSHTLGSELAWFLPS*RMTSSLEGDTQCLS
Trigger: GGAGAGGCACTGTGTATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 90 bp CAGGGCAGGTACACACTATCCTCTCCCTTATGCATGGCTGGACACTaGCTGAGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAG +
Preference number: 1 (lower is better)
Translates to: QGRYTLSSPLCMAGH*LRPCITRIANTHWE
Trigger: CTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGAGAGGATAGTGTGTACCTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 90 bp CAGAGGGCAGGGCAGGTACACACTATCCTCTCCCTTATGCATGGCTaGACACTGACTGAGGCCCTGCATCACAAGAATCGCCAATACCCA +
Preference number: 1 (lower is better)
Translates to: QRAGQVHTILSLMHG*TLTEALHHKNRQYP
Trigger: TGGGTATTGGCGATTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGAGAGGATAGTGTGTACCTGCCCTGCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 90 bp GCAGGTACACACTATCCTCTCCCTTATGCATGGCTGGACACTGACTaGGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: AGTHYPLPYAWLDTD*GPASQESPIPTGSH
Trigger: ATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGAGAGGATAGTGTGTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 90 bp CCCTGCTTCAAGACTGAAGACAGACAAATAGACAACCACCCAGACTaGTTAAGTGTCACAGACAGCCCCCACCCCAAGCTCCCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: PCFKTEDRQIDNHPD*LSVTDSPHPKLPSR
Trigger: CCTGGAAGGGAGCTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTGTCTGTCTTCAGTCTTGAAGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 90 bp ACAGACAACACTGGACCCACAGACCAAGAGCATTCTTCTAAGCCCTaGAGTAGCTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCC +
Preference number: 1 (lower is better)
Translates to: TDNTGPTDQEHSSKP*SSSRNGRGKLEAGS
Trigger: GGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAGCTACTCCAGGGCTTAGAAGAATGCTCTTGGTCTGTGGGTCCAGTGTTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 90 bp GGAAGGCAGGGAGGAAAAGGGCATTGGGAAGCCCTGCTTCAAGACTaGAGACAGACAAATAGACAACCACCCAGACTGCTTAAGTGTCAC +
Preference number: 1 (lower is better)
Translates to: GRQGGKGHWEALLQD*RQTNRQPPRLLKCH
Trigger: GTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTGTCTGTCTTCAGTCTTGAAGCAGGGCTTCCCAATGCCCTTTTCCTCCCTGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 90 bp TCAAGATTAGGGCATAAAAGTCAGGCTGCTATGCCAGACATGCTCTaGCCTATGGCAGGGCCAAGGAGAGGATTGTCACTTGAAAGTGGG +
Preference number: 1 (lower is better)
Translates to: SRLGHKSQAAMPDML*PMAGPRRGLSLESG
Trigger: CCCACTTTCAAGTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAGCCTGACTTTTATGCCCTAATCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 90 bp TCCAGGTATCCCCATAAATCATTTGGGCACACTCCCTCTTGGAATTaGAATTTCCATCTTCCACTTATCCCTAAGGAGCTGGCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: SRYPHKSFGHTPSWN*NFHLPLIPKELALW
Trigger: CCACAGGGCCAGCTCCTTAGGGATAAGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCCAAATGATTTATGGGGATACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 90 bp CTCCCTTCCAGGTATCCCCATAAATCATTTGGGCACACTCCCTCTTaGAATTGCAATTTCCATCTTCCACTTATCCCTAAGGAGCTGGCC +
Preference number: 1 (lower is better)
Translates to: LPSRYPHKSFGHTPS*NCNFHLPLIPKELA
Trigger: GGCCAGCTCCTTAGGGATAAGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCCAAATGATTTATGGGGATACCTGGAAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 90 bp ATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTaGAGAGACCCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGT +
Preference number: 1 (lower is better)
Translates to: MEEGNWKQGPFSIFM*RDPASSRVSKINFR
Trigger: ACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGGGTCTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 90 bp CAGGACAGGGACACTTTCCTTCCATCATGTCACAGACTGCAACTCTaGTGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTGTCTC +
Preference number: 1 (lower is better)
Translates to: QDRDTFLPSCHRLQL*WSRAGYIHYSFCCL
Trigger: GAGACAGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGAGTTGCAGTCTGTGACATGATGGAAGGAAAGTGTCCCTGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
3UTR CCA 90 bp CCTCTTGGAATTGCAATTTCCATCTTCCACTTATCCCTAAGGAGCTaGCCCTGTGGAGAGGTGTGTTGGTTGTTTTGTTTTTGCCAAAGG +
Preference number: 1 (lower is better)
Translates to: PLGIAISIFHLSLRS*PCGEVCWLFCFCQR
Trigger: CCTTTGGCAAAAACAAAACAACCAACACACCTCTCCACAGGGCCAGCTCCTTAGGGATAAGTGGAAGATGGAAATTGCAATTCCAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 90 bp AAATCAGTGATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTaGCATGCAGGCTTTACCAAGACCTTGGTTAAGTCCCAGTCACAT +
Preference number: 1 (lower is better)
Translates to: KSVIAGTNSIFSFLR*HAGFTKTLVKSQSH
Trigger: ATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATCACTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp ACCGGGAACAGGCCCCCACTCCCACACCCTGGGATCGGAGCTTGCTaGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: TGNRPPLPHPGIGAC*VLAILQDDFESGGR
Trigger: TCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCTGTTCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp CCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGCGGAAGGAAGATGCCATCTTGCAGGATaGCTTCGAGTCTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PSETVTRAAGGTGEAEGRCHLAG*LRVWRE
Trigger: CTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCA...TCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp CCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGCGGAAGGAAGAAAGGAGCTGGCCCTGTaGAGAGGTGTGTTGGTTGTT +
Preference number: 2 (lower is better)
Translates to: PSETVTRAAGGTGEAEGRKELAL*RGVLVV
Trigger: AACAACCAACACACCTCTCCACAGGGCCAGCTCCTT...TCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp ACAGGCCCCCACTCCCACACCCTGGGATCGGAGCTTGCTTGGTTCTaGCCATCTTGCAGGATGACTTCGAGTCTGGAGGGAGATACACAG +
Preference number: 2 (lower is better)
Translates to: TGPHSHTLGSELAWF*PSCRMTSSLEGDTQ
Trigger: CTGTGTATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACACCCATCAGAGACAGTaGCAAGAGCAGCTGGGGGCA +
Preference number: 2 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHTHQRQ*QEQLGA
Trigger: TGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGT...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACGAACGAAGCCCCAGATaGTCCAGTGCCAAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHERSPR*SSAKEV
Trigger: GACCTCCTTGGCACTGGAGCATCTGGGGCTTCGTTC...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp CCACTCCCACACCCTGGGATCGGAGCTTGCTTGGTTCTTGCCATCTaGCAGGATGACTTCGAGTCTGGAGGGAGATACACAGTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: PLPHPGIGACLVLAI*QDDFESGGRYTVPL
Trigger: GAGAGGCACTGTGTATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp ACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTTGGCTGGACACTGACTaGGGCCCTGCATCACAAGAA +
Preference number: 2 (lower is better)
Translates to: TSVPQAHQSLSSSFASCPWLDTD*GPASQE
Trigger: TTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCA...AGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp ACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTCCTGGGATCGGAGCTTaGTTGGTTCTTGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: TSVPQAHQSLSSSFASCPPGIGA*LVLAIL
Trigger: CAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGG...AGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACGACAACCACCCAGACTaGTTAAGTGTCACAGACAGC +
Preference number: 2 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHDNHPD*LSVTDS
Trigger: GCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTC...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp GCCAGGCAAATACCCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAAGCAGCTGCCTGTGTTaGGAACTTTTCAAATCAGTG +
Preference number: 2 (lower is better)
Translates to: ARQIPIRDSDKSSWGHGGSSCLC*ELFKSV
Trigger: CACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCT...TCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGTATTTGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp CCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGTTCCCCAAGCCCACCAATCGGCCCTCGCTCTAGGTaGTCCTGTAAAGGTACCTTG +
Preference number: 2 (lower is better)
Translates to: PASSRVSKINFRSPSPPIGPRSR*SCKGTL
Trigger: CAAGGTACCTTTACAGGAGCACCTAGAGCGAGGGCC...GATTGGTGGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACAGGAGGACTACAGGCTaGGGTGAAAATACACAAGGA +
Preference number: 2 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHRRTTG*GENTQG
Trigger: TCCTTGTGTATTTTCACCCCAGCCTGTAGTCCTCCT...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp CATCTTCCACTTATCCCTAAGGAGCTGGCCCTGTGGAGAGGTGTGTaGGTTGTTTTGTTTTTGCCAAAGGCCCTCGCTCTAGGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: HLPLIPKELALWRGV*VVLFLPKALALGAP
Trigger: AGGAGCACCTAGAGCGAGGGCCTTTGGCAAAAACAAAACAACCAACACACCTCTCCACAGGGCCAGCTCCTTAGGGATAAGTGGAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp TCCCATATACACAGCAGCTGCCTGTGTTGGGAACTTTTCAAATCAGTGATTGCGGCTGGGACTCTTGAGTaGGGGAAGGGGAGATGGGAG +
Preference number: 2 (lower is better)
Translates to: SHIHSSCLCWELFKSVIAAGTLE*GKGRWE
Trigger: CTCCCATCTCCCCTTCCCCCACTCAAGAGTCCCAGC...CGCAATCACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCTGTGTATATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp CAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACTaGAAAGTGGGAACACTTAAATGGATGACAGACAACACTGGACCC +
Preference number: 2 (lower is better)
Translates to: QTCSALWQGQGEDCH*KVGTLKWMTDNTGP
Trigger: GGGTCCAGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGCCAAGGGGAGTCCCATaGTCCACAAGGCAGAGACCT +
Preference number: 2 (lower is better)
Translates to: EWKREIGSRVPFRSSCEEPRGVP*STRQRP
Trigger: AGGTCTCTGCCTTGTGGATCATGGGACTCCCCTTGG...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp GCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGGCCATTGGCTACCCTTaGTCCCCAAAAATCCCTGGG +
Preference number: 2 (lower is better)
Translates to: ALHHKNRQYPLGAITINLAIGYP*SPKIPG
Trigger: CCCAGGGATTTTTGGGGAGCAAGGGTAGCCAATGGC...CAGATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp CATTCTTCTAAGCCCTGGAGTAGCTCGAGGAATGGAAGAGGGAAATaGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: HSSKPWSSSRNGRGK*EAGSLFDLHVKRPS
Trigger: GCTGGGTCTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAGCTACTCCAGGGCTTAGAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp TTGAAGGTGCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGCATCATGTCACAGACTaGAACTCTGATGGTCTCGTG +
Preference number: 2 (lower is better)
Translates to: LKVQAIFAGHLVEVVILQHHVTD*NSDGLV
Trigger: CACGAGACCATCAGAGTTGCAGTCTGTGACATGATG...CTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
3UTR-3UTR CCA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGCCCACTCCCACACCCTaGGATCGGAGCTTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: PLGAITINLEVRGEHIKKPTPTP*DRSLLG
Trigger: ACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGG...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAGCCCCTGATACGGGATaGATGGATGAACGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAAPDTG*MDERSP
Trigger: GGGGCTTCGTTCATCCATTCATCCCGTATCAGGGGC...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGGGATCGGAGCTTGCTTaGTTCTTGCCATCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: EWKREIGSRVPFRSSCEEGSELA*FLPSCR
Trigger: CCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCC...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTTGGTTCTTGCCATCTTaGAGGATGACTTCGAGTCTG +
Preference number: 2 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCWFLPS*RMTSSL
Trigger: CAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCA...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGACTCCCTCTTGGAATTaGAATTTCCATCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKTPSWN*NFHLPL
Trigger: AAGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGT...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp GAGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGATACGGGATGAATaGATGAACGAAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: EALHHKNRQYPLGAITINLIRDE*MNEAPD
Trigger: ATCTGGGGCTTCGTTCATCCATTCATCCCGTATCAG...ATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp CAAGATAAACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTGGGCACACTCCCTCTTaGAATTGCAATTTCCATCTT +
Preference number: 2 (lower is better)
Translates to: QDKLPFPKPTNPCPVPLLGHTPS*NCNFHL
Trigger: AAGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCC...AAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGTTTATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTTACGGGATGAATGGATaGACGAAGCCCCAGATGCTC +
Preference number: 2 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTYGMNG*TKPQML
Trigger: GAGCATCTGGGGCTTCGTTCATCCATTCATCCCGTA...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp GCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGAATTATGCTGGCCTGTaGGAAATAATGGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: ALHHKNRQYPLGAITINLNYAGL*EIMGEG
Trigger: TCCTTCCCCCATTATTTCCCACAGGCCAGCATAATT...CAGATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGGCCCTGCTTCAAGACTaGAGACAGACAAATAGACAA +
Preference number: 2 (lower is better)
Translates to: EWKREIGSRVPFRSSCEEALLQD*RQTNRQ
Trigger: TTGTCTATTTGTCTGTCTTCAGTCTTGAAGCAGGGC...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR TCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAAAAAATCCCTGGGGTTaGAGTGAGGAGGACTACAGG +
Preference number: 2 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAKNPWG*SEEDYR
Trigger: CCTGTAGTCCTCCTCACTTCAACCCCAGGGATTTTT...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGGGCATTGGGAAGCCCTaGTTCAAGACTGAAGACAGA +
Preference number: 2 (lower is better)
Translates to: PLGAITINLEVRGEHIKKGIGKP*FKTEDR
Trigger: TCTGTCTTCAGTCTTGAAGCAGGGCTTCCCAATGCC...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CCA 90 bp GAGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATGCTTTACCAAGACCTTaGTTAAGTCCCAGTCACATT +
Preference number: 2 (lower is better)
Translates to: EALHHKNRQYPLGAITINALPRP*LSPSHI
Trigger: AATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGC...ATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTCATATACACAGCAGCTaGCTGTGTTGGGAACTTTTC +
Preference number: 2 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTHIHSS*LCWELF
Trigger: GAAAAGTTCCCAACACAGGCAGCTGCTGTGTATATG...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR GCA 90 bp GGTTCAGGACAGGGACACTTTCCTTCCATCATGTCACAGACTGCAACTCTGATGATTCATTATAGTTTTTaGTGTCTCCTGGATGTCTCT +
Preference number: 2 (lower is better)
Translates to: GSGQGHFPSIMSQTATLMIHYSF*CLLDVS
Trigger: AGAGACATCCAGGAGACAGCAAAAACTATAATGAAT...CATCAGAGTTGCAGTCTGTGACATGATGGAAGGAAAGTGTCCCTGTCCTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
3UTR CAA 90 bp AGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACCAAGACCTaGGTTAAGTCCCAGTCACATTTACTTTCTGTCTTACATCTAGAA +
Preference number: 2 (lower is better)
Translates to: SIFSFLRCHAGFTKT*VKSQSHLLSVLHLE
Trigger: TTCTAGATGTAAGACAGAAAGTAAATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 90 bp TTCTATGTAGTGGCTCTAATCCCATATACACAGCAGCTGCCTGTGTaGGGAACTTTTCAAATCAGTGATTGCGGGAACAAACAGTATTTT +
Preference number: 2 (lower is better)
Translates to: FYVVALIPYTQQLPV*GTFQISDCGNKQYF
Trigger: AAAATACTGTTTGTTCCCGCAATCACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCTGTGTATATGGGATTAGAGCCACTACATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp AGGTCAGACCGGGAACAGGCCCCCACTCCCACACCCTaGGATCGGAGCTTGCTTGGTTCTTGCCATCTTGCA +
Preference number: 3 (lower is better)
Translates to: RSDREQAPTPTP*DRSLLGSCHLA
Trigger: TGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCTGTTCCCGGTCTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp GGCCCCCACTCCCACACCCTGGGATCGGAGCTTGCTTaGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTG +
Preference number: 3 (lower is better)
Translates to: GPHSHTLGSELA*FLPSCRMTSSL
Trigger: CAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp GCCAGGCAAATACCCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGGATCGGAGCTTGCTaGGTTCTTGCCATCTTGCAG +
Preference number: 3 (lower is better)
Translates to: ARQIPIRDSDKSSWGHGGGIGAC*VLAILQ
Trigger: CTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCC...TCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGTATTTGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 72 bp AACAGGCCCCCACTCCCACACCCTGGGATCGGAGCTTaGTTGGTTCTTGCCATCTTGCAGGATGACTTCGAG +
Preference number: 3 (lower is better)
Translates to: NRPPLPHPGIGA*LVLAILQDDFE
Trigger: CTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACCCCTGGGATCGGAGCTaGCTTGGTTCTTGCCATCTT +
Preference number: 3 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHPWDRS*LGSCHL
Trigger: AAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGG...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp AGGCAAATACCCATCAGAGACAGTGACAAGAGCAGCTaGGGGCACGGGGGAGGCGGAAGGAAGAGAAAGAAG +
Preference number: 3 (lower is better)
Translates to: RQIPIRDSDKSS*GHGGGGRKRKK
Trigger: CTTCTTTCTCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGTATTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 72 bp TGCTCCTGTAAAGGTACCTTGGCCCCTGATACGGGATaGATGGATGAACGAAGCCCCAGATGCTCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: CSCKGTLAPDTG*MDERSPRCSSA
Trigger: GGCACTGGAGCATCTGGGGCTTCGTTCATCCATTCATCCCGTATCAGGGGCCAAGGTACCTTTACAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp CCTGTAAAGGTACCTTGGCCCCTGATACGGGATGAATaGATGAACGAAGCCCCAGATGCTCCAGTGCCAAGG +
Preference number: 3 (lower is better)
Translates to: PVKVPWPLIRDE*MNEAPDAPVPR
Trigger: CCTTGGCACTGGAGCATCTGGGGCTTCGTTCATCCATTCATCCCGTATCAGGGGCCAAGGTACCTTTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp AAGGCCCTCGCTCTAGGTGCTCCTGTAAAGGTACCTTaGCCCCTGATACGGGATGAATGGATGAACGAAGCC +
Preference number: 3 (lower is better)
Translates to: KALALGAPVKVP*PLIRDEWMNEA
Trigger: GGCTTCGTTCATCCATTCATCCCGTATCAGGGGCCAAGGTACCTTTACAGGAGCACCTAGAGCGAGGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp GGGCAGGTACACACTATCCTCTCCCTTATGCATGGCTaGACACTGACTGAGGCCCTGCATCACAAGAATCGC +
Preference number: 3 (lower is better)
Translates to: GQVHTILSLMHG*TLTEALHHKNR
Trigger: GCGATTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGAGAGGATAGTGTGTACCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 72 bp ACCCTGGGATCGGAGCTTGCTTGGTTCTTGCCATCTTaGAGGATGACTTCGAGTCTGGAGGGAGATACACAG +
Preference number: 3 (lower is better)
Translates to: TLGSELAWFLPS*RMTSSLEGDTQ
Trigger: CTGTGTATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp CTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTCCACTCCCTCTTGGAATaGCAATTTCCATCTTCCACT +
Preference number: 3 (lower is better)
Translates to: LPFPKPTNPCPVPLLPALHSLLE*QFPSST
Trigger: AGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGTG...GAGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp ACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTGGCTTTACCAAGACCTaGGTTAAGTCCCAGTCACAT +
Preference number: 3 (lower is better)
Translates to: TSVPQAHQSLSSSFASCPGFTKT*VKSQSH
Trigger: ATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGCC...AGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 72 bp GATCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATaGCTTCGAGTCTGGAGGGAGATACACAGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: DRSLLGSCHLAG*LRVWREIHSAS
Trigger: AGAGGCACTGTGTATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 72 bp CACTATCCTCTCCCTTATGCATGGCTGGACACTGACTaGGGCCCTGCATCACAAGAATCGCCAATACCCACT +
Preference number: 3 (lower is better)
Translates to: HYPLPYAWLDTD*GPASQESPIPT
Trigger: AGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGAGAGGATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 72 bp TCTGCATTCTCATTATGGAGCCTCTCCAGCACTTTCTaGCGTATCAGTCCCAGGCGCATCAAGAGGGACTGG +
Preference number: 3 (lower is better)
Translates to: SAFSLWSLSSTF*RISPRRIKRDW
Trigger: CCAGTCCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTGGAGAGGCTCCATAATGAGAATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
3UTR-3UTR CAA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGGAGCTTGCTTGGTTCTaGCCATCTTGCAGGATGACT +
Preference number: 3 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKELAWF*PSCRMT
Trigger: AGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTC...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGATCCCCATAAATCATTaGGGCACACTCCCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKIPINH*GTLPLG
Trigger: TCCAAGAGGGAGTGTGCCCAAATGATTTATGGGGAT...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp CATTTCTGCATTCTCATTATGGAGCCTCTCCAGCACTTTCTGACGTATCAGTCCAGGGTCCTGCATAGTTaGGCCTTGAAGGTGCAGGCG +
Preference number: 3 (lower is better)
Translates to: HFCILIMEPLQHFLTYQSRVLHS*ALKVQA
Trigger: CGCCTGCACCTTCAAGGCCAAACTATGCAGGACCCT...GGACTGATACGTCAGAAAGTGCTGGAGAGGCTCCATAATGAGAATGCAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
3UTR TCA 72 bp TACACACTATCCTCTCCCTTATGCATGGCTGGACACTaGCTGAGGCCCTGCATCACAAGAATCGCCAATACC +
Preference number: 3 (lower is better)
Translates to: YTLSSPLCMAGH*LRPCITRIANT
Trigger: GGTATTGGCGATTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGAGAGGATAGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 72 bp AAGACTGAAGACAGACAAATAGACAACCACCCAGACTaGTTAAGTGTCACAGACAGCCCCCACCCCAAGCTC +
Preference number: 3 (lower is better)
Translates to: KTEDRQIDNHPD*LSVTDSPHPKL
Trigger: GAGCTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTGTCTGTCTTCAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGGGAGAGGTGTGTTGGTaGTTTTGTTTTTGCCAAAGG +
Preference number: 3 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKGEVCW*FCFCQR
Trigger: CCTTTGGCAAAAACAAAACAACCAACACACCTCTCC...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGTGCCATTGGCTACCCTaGCTCCCCAAAAATCCCTGG +
Preference number: 3 (lower is better)
Translates to: EWKREIGSRVPFRSSCEECHWLP*LPKNPW
Trigger: CCAGGGATTTTTGGGGAGCAAGGGTAGCCAATGGCA...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 72 bp AGGACAGGGACACTTTCCTTCCATCATGTCACAGACTaGAACTCTGATGGTCTCGTGCCGGATACATTCATT +
Preference number: 3 (lower is better)
Translates to: RTGTLSFHHVTD*NSDGLVPDTFI
Trigger: AATGAATGTATCCGGCACGAGACCATCAGAGTTGCAGTCTGTGACATGATGGAAGGAAAGTGTCCCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
3UTR-3UTR CAA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTTTGGTTCTTGCCATCTaGCAGGATGACTTCGAGTCT +
Preference number: 3 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCLVLAI*QDDFES
Trigger: AGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAA...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTTTGGTTGTTTTGTTTTaGCCAAAGGCCCTCGCTCTA +
Preference number: 3 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCLVVLF*PKALAL
Trigger: TAGAGCGAGGGCCTTTGGCAAAAACAAAACAACCAA...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 72 bp GGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTaGAGAGACCCAGCCTCTTCAAGGGTATCCAAGATA +
Preference number: 3 (lower is better)
Translates to: GNWKQGPFSIFM*RDPASSRVSKI
Trigger: TATCTTGGATACCCTTGAAGAGGCTGGGTCTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR GCA 72 bp ATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTaGCATGCAGGCTTTACCAAGACCTTGGTTAAGTCC +
Preference number: 3 (lower is better)
Translates to: IAGTNSIFSFLR*HAGFTKTLVKS
Trigger: GGACTTAACCAAGGTCTTGGTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp GCTTCTTACGGTGCCATGCAGGCTTTACCAAGACCTTaGTTAAGTCCCAGTCACATTTACTTTCTGTCTTAC +
Preference number: 3 (lower is better)
Translates to: ASYGAMQALPRP*LSPSHIYFLSY
Trigger: GTAAGACAGAAAGTAAATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGCCTGCATGGCACCGTAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTTGGGCACACTCCCTCTaGGAATTGCAATTTCCATCT +
Preference number: 3 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTWAHSL*ELQFPS
Trigger: AGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCCA...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CCA 72 bp ATTGCAATTTCCATCTTCCACTTATCCCTAAGGAGCTaGCCCTGTGGAGAGGTGTGTTGGTTGTTTTGTTTT +
Preference number: 3 (lower is better)
Translates to: IAISIFHLSLRS*PCGEVCWLFCF
Trigger: AAAACAAAACAACCAACACACCTCTCCACAGGGCCAGCTCCTTAGGGATAAGTGGAAGATGGAAATTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR TCA 72 bp GACACTTTCCTTCCATCATGTCACAGACTGCAACTCTaGTGGTCTCGTGCCGGATACATTCATTATAGTTTT +
Preference number: 3 (lower is better)
Translates to: DTFLPSCHRLQL*WSRAGYIHYSF
Trigger: AAAACTATAATGAATGTATCCGGCACGAGACCATCAGAGTTGCAGTCTGTGACATGATGGAAGGAAAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
3UTR CCA 72 bp AGGTATCCCCATAAATCATTTGGGCACACTCCCTCTTaGAATTGCAATTTCCATCTTCCACTTATCCCTAAG +
Preference number: 3 (lower is better)
Translates to: RYPHKSFGHTPS*NCNFHLPLIPK
Trigger: CTTAGGGATAAGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCCAAATGATTTATGGGGATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR-3UTR CAA 90 bp GGAACTTTTCAAATCAGTGATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGCTGTGGAGAGGTGTGTaGGTTGTTTTGTTTTTGCCA +
Preference number: 3 (lower is better)
Translates to: GTFQISDCGNKQYFQLLTLWRGV*VVLFLP
Trigger: TGGCAAAAACAAAACAACCAACACACCTCTCCACAG...CGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATCACTGATTTGAAAAGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GCCAGGCAAATACCCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGACCCGGCGCCCGCCGTTaGCGCCTCCTCAGTCGGACT +
Preference number: 4 (lower is better)
Translates to: ARQIPIRDSDKSSWGHGGPGARR*RLLSRT
Trigger: AGTCCGACTGAGGAGGCGGCAACGGCGGGCGCCGGG...TCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGTATTTGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAAAGGACTGACACTGCGGCGCGGTaGGCTCGCCGTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: AGDLCRPPRRSRNTPERTDTAAR*ARRPSR
Trigger: CCGACTGGGACGGCGAGCGCACCGCGCCGCAGTGTC...AGTCCTTTCTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR GCA 90 bp CATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGATCCGGAGTAGACACTaGGGCGCGGTGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: HQEGLVVKVAPLLSKRVLIRSRH*GAVRSP
Trigger: CGGCGAGCGCACCGCGCCGCAGTGTCTACTCCGGAT...CAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CCA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACCCCGAGGTGGGTGGATaGGATAGTCGGGCGGACACC +
Preference number: 4 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHPEVGG*DSRADT
Trigger: GGTGTCCGCCCGACTATCCCATCCACCCACCTCGGG...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GCCAGGCAAATACCCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGACCAAGGGGAGTCCCATaGTCCACAAGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: ARQIPIRDSDKSSWGHGGPRGVP*STRQRP
Trigger: AGGTCTCTGCCTTGTGGATCATGGGACTCCCCTTGG...TCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGTATTTGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp TTGAAGGTGCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAGCGTGGGGTCCCAGTaGCTAAGCAGCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LKVQAIFAGHLVEVVILQSVGSQ*LSSAAP
Trigger: CGGGGCCGCGCTGCTTAGCCACTGGGACCCCACGCT...CTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CCA 90 bp CATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGCCCGAGGTGGGTGGATaGGATAGTCGGGCGGACACC +
Preference number: 4 (lower is better)
Translates to: HQEGLVVKVAPLLSKRVLPEVGG*DSRADT
Trigger: GGTGTCCGCCCGACTATCCCATCCACCCACCTCGGG...CAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR TCA 90 bp GGTTCAGGACAGGGACACTTTCCTTCCATCATGTCACAGACTGCAACTCTGATGCGTCCCAGTCGGAGCTaGGCGTGGGGTCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GSGQGHFPSIMSQTATLMRPSRS*AWGPSG
Trigger: GCCACTGGGACCCCACGCTCAGCTCCGACTGGGACG...CATCAGAGTTGCAGTCTGTGACATGATGGAAGGAAAGTGTCCCTGTCCTGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR GCA 90 bp CCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGTTCCCCAAGCCCACCAATCATCCGGAGTAGACACTaGGGCGCGGTGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: PASSRVSKINFRSPSPPIIRSRH*GAVRSP
Trigger: CGGCGAGCGCACCGCGCCGCAGTGTCTACTCCGGAT...GATTGGTGGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTCGTCCCAGTCGGAGCTaGGCGTGGGGTCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCRPSRS*AWGPSG
Trigger: GCCACTGGGACCCCACGCTCAGCTCCGACTGGGACG...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CAGGCGCATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGCTCTCCAGCACTTTCTaGCGTATCAGTCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QAHQEGLVVKVAPLLSKRLSSTF*RISPRR
Trigger: GCGCCTGGGACTGATACGTCAGAAAGTGCTGGAGAG...CCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATGCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR TCA 90 bp CTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTCTGCCATCTTGCAGGATaGCTTCGAGTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPFPKPTNPCPVPLLPALCHLAG*LRVWRE
Trigger: CTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCA...GAGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGCAACACCAGCAACGCTaGTCGCCCCGGGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: EWKREIGSRVPFRSSCEEQHQQR*SPRGPP
Trigger: CGGCGGGCCCCGGGGCGAGCAGCGTTGCTGGTGTTG...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGGACACTGCGGCGCGGTaGGCTCGCCGTCCCAGTCGG +
Preference number: 4 (lower is better)
Translates to: EWKREIGSRVPFRSSCEEDTAAR*ARRPSR
Trigger: CCGACTGGGACGGCGAGCGCACCGCGCCGCAGTGTC...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp CAGGCGCATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCGGG +
Preference number: 4 (lower is better)
Translates to: QAHQEGLVVKVAPLLSKRQFDPR*VDGIVG
Trigger: CCCGACTATCCCATCCACCCACCTCGGGTCAAACTG...CCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATGCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CCA 90 bp CCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGTTCCCCAAGCCCACCAATCAGTGACAAGAGCAGCTaGGGGCACGGGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PASSRVSKINFRSPSPPISDKSS*GHGGGG
Trigger: TCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACT...GATTGGTGGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp AGGCCCCCACTCCCACACCCTGGGATCGGAGCTTGCTaGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: RPPLPHPGIGAC*VLAILQDDFES
Trigger: AGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CAGGCGCATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGGTGCAGGCGATCTTTaGAGGCCACCTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: QAHQEGLVVKVAPLLSKRGAGDL*RPPRRS
Trigger: ACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACC...CCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp CCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGCGGAAGGAAGATGGTTCTTGCCATCTTaGAGGATGACTTCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PSETVTRAAGGTGEAEGRWFLPS*RMTSSL
Trigger: CAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCA...TCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACAGCGTGGGGTCCCAGTaGCTAAGCAGCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYSVGSQ*LSSAAP
Trigger: CGGGGCCGCGCTGCTTAGCCACTGGGACCCCACGCT...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GGGATCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAGCTGGGACTCTTGAGTaGGGGAAGGGGAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: GIGACLVLAILQDDFESGAGTLE*GKGRWE
Trigger: CTCCCATCTCCCCTTCCCCCACTCAAGAGTCCCAGC...TCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GGGATCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGACCCACTCCCACACCCTaGGATCGGAGCTTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GIGACLVLAILQDDFESGPTPTP*DRSLLG
Trigger: ACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTGGG...TCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp CACTCCCACACCCTGGGATCGGAGCTTGCTTGGTTCTaGCCATCTTGCAGGATGACTTCGAGTCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HSHTLGSELAWF*PSCRMTSSLEG
Trigger: TCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTGTGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGCCGTTGTCATCAGTTTaGCCCGAGGTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKPLSSV*PEVGGW
Trigger: CCATCCACCCACCTCGGGTCAAACTGATGACAACGG...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CTGCTATGCCAGACATGCTCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACGACTACAGGCTGGGGTaGAAATACACAAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: LLCQTCSALWQGQGEDCHDYRLG*KYTRTA
Trigger: GGCTGTCCTTGTGTATTTTCACCCCAGCCTGTAGTC...GTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGCGGAAGGAAGATTTTCGATCTTCATGTaGAGAGACCCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSETVTRAAGGTGEAEGRFSIFM*RDPASS
Trigger: TGAAGAGGCTGGGTCTCTTCACATGAAGATCGAAAA...TCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGCGGAAGGAAGAGAACACTTAAATGGATaGCAGACAACACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: PSETVTRAAGGTGEAEGREHLNG*QTTLDP
Trigger: TGGGTCCAGTGTTGTCTGTCATCCATTTAAGTGTTC...TCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGACTCTCCGCCATCGCTaGTTCGCTTCCGGGACTACT +
Preference number: 4 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKTLRHR*FASGTT
Trigger: AGTAGTCCCGGAAGCGAAGCAGCGATGGCGGAGAGT...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp CCGCTTCTCTCCAAAAGGGTCCTGCATAGTTTGGCCTaGAAGGTGCAGGCGATCTTTGCAGGCCACCTCGTA +
Preference number: 4 (lower is better)
Translates to: PLLSKRVLHSLA*KVQAIFAGHLV
Trigger: TACGAGGTGGCCTGCAAAGATCGCCTGCACCTTCAAGGCCAAACTATGCAGGACCCTTTTGGAGAGAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR TCA 90 bp GCTGTCTCCTGGATGTCTCTCCTGTTCAAAGCCGGGCTCATTGTGATAGGGGTTCACAGACTGCAACTCTaGTGGTCTCGTGCCGGATAC +
Preference number: 4 (lower is better)
Translates to: AVSWMSLLFKAGLIVIGVHRLQL*WSRAGY
Trigger: GTATCCGGCACGAGACCATCAGAGTTGCAGTCTGTG...AACCCCTATCACAATGAGCCCGGCTTTGAACAGGAGAGACATCCAGGAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR TCA 90 bp CAGGCGCATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGTGCATAGTTTGGCCTTaGAGGTGCAGGCGATCTTTG +
Preference number: 4 (lower is better)
Translates to: QAHQEGLVVKVAPLLSKRCIVWP*RCRRSL
Trigger: CAAAGATCGCCTGCACCTTCAAGGCCAAACTATGCA...CCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATGCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp TCTCCAGCACTTTCTGACGTATCAGTCCCAGGCGCATCAAGAGGGACTGGTAGTGGTGCAGGCGATCTTTaGAGGCCACCTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SPALSDVSVPGASRGTGSGAGDL*RPPRRS
Trigger: ACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACC...ACTACCAGTCCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp AACCCAGGCTTAGCTGTGTCATTCTATGACAGCTGTCGATGCCACGCTTGTGGGGGTGCAGGCGATCTTTaGAGGCCACCTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: NPGLAVSFYDSCRCHACGGAGDL*RPPRRS
Trigger: ACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACC...CCCACAAGCGTGGCATCGACAGCTGTCATAGAATGACACAGCTAAGCCTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514948.1
CDS-3UTR GCA 90 bp ACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTGACAACCACCCAGACTaGTTAAGTGTCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: TSVPQAHQSLSSSFASCPDNHPD*LSVTDS
Trigger: GCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTC...AGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CAAGATAAACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTAGCCCCAACCCCCTCTaGCATTGGCTACCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QDKLPFPKPTNPCPVPLLSPNPL*HWLPLL
Trigger: GAGCAAGGGTAGCCAATGGCAGAGGGGGTTGGGGCT...AAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGTTTATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGTTCCCCAAGCCCACCAATCATGCCAGACATGCTCTaGCCTATGGCAGGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PASSRVSKINFRSPSPPIMPDML*PMAGPR
Trigger: CCTTGGCCCTGCCATAGGGCAGAGCATGTCTGGCAT...GATTGGTGGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGTCCCTTATGCATGGCTaGACACTGACTGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKSLMHG*TLTEAL
Trigger: CAGGGCCTCAGTCAGTGTCCAGCCATGCATAAGGGA...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp AACCCAGGCTTAGCTGTGTCATTCTATGACAGCTGTCGATGCCACGCTTGTGGGTCGATGCCACGCTTGTaGGGGGCTTTTACATGGCCA +
Preference number: 4 (lower is better)
Translates to: NPGLAVSFYDSCRCHACGSMPRL*GAFTWP
Trigger: TGGCCATGTAAAAGCCCCCCACAAGCGTGGCATCGA...CCCACAAGCGTGGCATCGACAGCTGTCATAGAATGACACAGCTAAGCCTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514948.1
3UTR CAA 72 bp CACCCTGGGATCGGAGCTTGCTTGGTTCTTGCCATCTaGCAGGATGACTTCGAGTCTGGAGGGAGATACACA +
Preference number: 4 (lower is better)
Translates to: HPGIGACLVLAI*QDDFESGGRYT
Trigger: TGTGTATCTCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp CCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTaGCTTCCTGCCCTCCCAAATAGGACATTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PFPKPTNPCPVP*LPALPNRTFSF
Trigger: AAAGGAGAATGTCCTATTTGGGAGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp AGAAGTCGTAATACTCCAGAAAGGACTTCTCCATCACCCCTCGTAGGGGTTCAGCCGTTGTCATCAGTTTaGCCCGAGGTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RSRNTPERTSPSPLVGVQPLSSV*PEVGGW
Trigger: CCATCCACCCACCTCGGGTCAAACTGATGACAACGG...CTGAACCCCTACGAGGGGTGATGGAGAAGTCCTTTCTGGAGTATTACGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR TCA 90 bp AGGGGAAGGATGGATTCCCTTGATGCCCAGGATTACAGGGCACCTAAAGCACATCACAGACTGCAACTCTaGTGGTCTCGTGCCGGATAC +
Preference number: 4 (lower is better)
Translates to: RGRMDSLDAQDYRAPKAHHRLQL*WSRAGY
Trigger: GTATCCGGCACGAGACCATCAGAGTTGCAGTCTGTG...ATGTGCTTTAGGTGCCCTGTAATCCTGGGCATCAAGGGAATCCATCCTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp AGAAGTCGTAATACTCCAGAAAGGACTTCTCCATCACCCCTCGTAGGGGTTCAGCTCTCCAGCACTTTCTaGCGTATCAGTCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RSRNTPERTSPSPLVGVQLSSTF*RISPRR
Trigger: GCGCCTGGGACTGATACGTCAGAAAGTGCTGGAGAG...CTGAACCCCTACGAGGGGTGATGGAGAAGTCCTTTCTGGAGTATTACGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR TCA 90 bp AACCCAGGCTTAGCTGTGTCATTCTATGACAGCTGTCGATGCCACGCTTGTGGGAGCTGTGTCATTCTATaGCAGCTGTCGATGCCACGC +
Preference number: 4 (lower is better)
Translates to: NPGLAVSFYDSCRCHACGSCVIL*QLSMPR
Trigger: GCGTGGCATCGACAGCTGTCATAGAATGACACAGCT...CCCACAAGCGTGGCATCGACAGCTGTCATAGAATGACACAGCTAAGCCTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514948.1
CDS-3UTR TCA 90 bp GGGTTCAGGACAGGGACACTTTCCTTCCATCATGTCACAGACTGCAACTCTGATCACAGACTGCAACTCTaGTGGTCTCGTGCCGGATAC +
Preference number: 4 (lower is better)
Translates to: GFRTGTLSFHHVTDCNSDHRLQL*WSRAGY
Trigger: GTATCCGGCACGAGACCATCAGAGTTGCAGTCTGTG...ATCAGAGTTGCAGTCTGTGACATGATGGAAGGAAAGTGTCCCTGTCCTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR TCA 90 bp AACCCAGGCTTAGCTGTGTCATTCTATGACAGCTGTCGATGCCACGCTTGTGGGTGCATAGTTTGGCCTTaGAGGTGCAGGCGATCTTTG +
Preference number: 4 (lower is better)
Translates to: NPGLAVSFYDSCRCHACGCIVWP*RCRRSL
Trigger: CAAAGATCGCCTGCACCTTCAAGGCCAAACTATGCA...CCCACAAGCGTGGCATCGACAGCTGTCATAGAATGACACAGCTAAGCCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514948.1
CDS-3UTR TCA 90 bp GCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGCTCTCCAGCACTTTCTaGCGTATCAGTCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ALHHKNRQYPLGAITINLLSSTF*RISPRR
Trigger: GCGCCTGGGACTGATACGTCAGAAAGTGCTGGAGAG...CAGATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGCCCCTGATACGGGATaGATGGATGAACGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCAPDTG*MDERSP
Trigger: GGGGCTTCGTTCATCCATTCATCCCGTATCAGGGGC...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGCATCATGTCACAGACTaGAACTCTGATGGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: HQEGLVVKVAPLLSKRVLHHVTD*NSDGLV
Trigger: CACGAGACCATCAGAGTTGCAGTCTGTGACATGATG...CAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAACGAAGCCCCAGATaGTCCAGTGCCAAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCERSPR*SSAKEV
Trigger: GACCTCCTTGGCACTGGAGCATCTGGGGCTTCGTTC...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp ACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTCATATACACAGCAGCTaGCTGTGTTGGGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: TSVPQAHQSLSSSFASCPHIHSS*LCWELF
Trigger: GAAAAGTTCCCAACACAGGCAGCTGCTGTGTATATG...AGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GAGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGCTATGCCAGACATaGTCTGCCCTATGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EALHHKNRQYPLGAITINLLCQT*SALWQG
Trigger: GCCCTGCCATAGGGCAGAGCATGTCTGGCATAGCAG...ATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GCCAGGCAAATACCCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGATACAACGAACATTCCTaGAGGAGGCTCCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: ARQIPIRDSDKSSWGHGGYNEHS*RRLLIN
Trigger: ATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTA...TCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGTATTTGCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGCCTGTAAAGGTACCTTaGCCCCTGATACGGGATGAA +
Preference number: 4 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKPVKVP*PLIRDE
Trigger: TTCATCCCGTATCAGGGGCCAAGGTACCTTTACAGG...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp AGGGGAAGGATGGATTCCCTTGATGCCCAGGATTACAGGGCACCTAAAGCACATTGCATAGTTTGGCCTTaGAGGTGCAGGCGATCTTTG +
Preference number: 4 (lower is better)
Translates to: RGRMDSLDAQDYRAPKAHCIVWP*RCRRSL
Trigger: CAAAGATCGCCTGCACCTTCAAGGCCAAACTATGCA...ATGTGCTTTAGGTGCCCTGTAATCCTGGGCATCAAGGGAATCCATCCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAAAGGACTTGCATAGTTTGGCCTTaGAGGTGCAGGCGATCTTTG +
Preference number: 4 (lower is better)
Translates to: AGDLCRPPRRSRNTPERTCIVWP*RCRRSL
Trigger: CAAAGATCGCCTGCACCTTCAAGGCCAAACTATGCA...AGTCCTTTCTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR TCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGTGCATGGCTGGACACTaGCTGAGGCCCTGCATCACA +
Preference number: 4 (lower is better)
Translates to: EWKREIGSRVPFRSSCEECMAGH*LRPCIT
Trigger: TGTGATGCAGGGCCTCAGTCAGTGTCCAGCCATGCA...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGCATCATGTCACAGACTaGAACTCTGATGGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKHHVTD*NSDGLV
Trigger: CACGAGACCATCAGAGTTGCAGTCTGTGACATGATG...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp AACCCAGGCTTAGCTGTGTCATTCTATGACAGCTGTCGATGCCACGCTTGTGGGCATCATGTCACAGACTaGAACTCTGATGGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: NPGLAVSFYDSCRCHACGHHVTD*NSDGLV
Trigger: CACGAGACCATCAGAGTTGCAGTCTGTGACATGATG...CCCACAAGCGTGGCATCGACAGCTGTCATAGAATGACACAGCTAAGCCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514948.1
CDS-3UTR GCA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGGTGCAGGCGATCTTTaGAGGCCACCTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCGAGDL*RPPRRS
Trigger: ACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACC...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTCATCAGAGTCCATTTCTaGATTCTCATTATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LPFPKPTNPCPVPLLPALIRVHF*ILIMEP
Trigger: AGGCTCCATAATGAGAATGCAGAAATGGACTCTGAT...GAGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GGGATCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGACTTCTTACGGTGCCATaGAGGCTTTACCAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GIGACLVLAILQDDFESGLLTVP*RLYQDL
Trigger: AAGGTCTTGGTAAAGCCTGCATGGCACCGTAAGAAG...TCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp AGGGGAAGGATGGATTCCCTTGATGCCCAGGATTACAGGGCACCTAAAGCACATCAAAAAGGGGAAGGATaGATTCCCTTGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRMDSLDAQDYRAPKAHQKGEG*IPLMPR
Trigger: CCTGGGCATCAAGGGAATCCATCCTTCCCCTTTTTG...ATGTGCTTTAGGTGCCCTGTAATCCTGGGCATCAAGGGAATCCATCCTTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTACATGCTCTGCCCTATaGCAGGGCCAAGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCTCSAL*QGQGED
Trigger: ATCCTCTCCTTGGCCCTGCCATAGGGCAGAGCATGT...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACGATAGAGATGAGCACTaGGGAGATGCTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYDRDEH*GDALGW
Trigger: CCAGCCCAGAGCATCTCCTCAGTGCTCATCTCTATC...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGTACGGGATGAATGGATaGACGAAGCCCCAGATGCTC +
Preference number: 4 (lower is better)
Translates to: ALHHKNRQYPLGAITINLYGMNG*TKPQML
Trigger: GAGCATCTGGGGCTTCGTTCATCCATTCATCCCGTA...CAGATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CAAATAGACAACCACCCAGACTGCTTAAGTGTCACAGACAGCCCCCACCCCAAGGCCCTGCTTCAAGACTaGAGACAGACAAATAGACAA +
Preference number: 4 (lower is better)
Translates to: QIDNHPDCLSVTDSPHPKALLQD*RQTNRQ
Trigger: TTGTCTATTTGTCTGTCTTCAGTCTTGAAGCAGGGC...CTTGGGGTGGGGGCTGTCTGTGACACTTAAGCAGTCTGGGTGGTTGTCTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp CAAGATAAACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTAAAAATCCCTGGGGTTaGAGTGAGGAGGACTACAGG +
Preference number: 4 (lower is better)
Translates to: QDKLPFPKPTNPCPVPLLKNPWG*SEEDYR
Trigger: CCTGTAGTCCTCCTCACTTCAACCCCAGGGATTTTT...AAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGTTTATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGTGGCTGGACACTGACTaGGGCCCTGCATCACAAGAA +
Preference number: 4 (lower is better)
Translates to: EWKREIGSRVPFRSSCEEWLDTD*GPASQE
Trigger: TTCTTGTGATGCAGGGCCTCAGTCAGTGTCCAGCCA...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGTGGGCCTGTGATCAATaGATGAATCTTAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: HQEGLVVKVAPLLSKRVLWACDQ*MNLSHV
Trigger: GACATGACTAAGATTCATGCATTGATCACAGGCCCA...CAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR GCA 90 bp GTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGCATAGTTTGGCCTTGAAGCTGTCCCAGATGAACTaGTATCAGAGTCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: VKVAPLLSKRVLHSLALKLSQMN*YQSPFL
Trigger: CAGAAATGGACTCTGATAGCAGTTCATCTGGGACAG...CTTCAAGGCCAAACTATGCAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CCA 90 bp GCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGAAGGAGCTGGCCCTGTaGAGAGGTGTGTTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ALHHKNRQYPLGAITINLKELAL*RGVLVV
Trigger: AACAACCAACACACCTCTCCACAGGGCCAGCTCCTT...CAGATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp TCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAGGGAGGGCACACTCCCTCTTaGAATTGCAATTTCCATCTT +
Preference number: 4 (lower is better)
Translates to: SELAWFLPSCRMTSSLEGGHTPS*NCNFHL
Trigger: AAGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCC...TCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp AAGCCCTGGAGTAGCTCGAGGAATGGAAGAGGGAAATaGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAG +
Preference number: 4 (lower is better)
Translates to: KPWSSSRNGRGK*EAGSLFDLHVK
Trigger: CTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAGCTACTCCAGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTACCCTCAGGCTCCCATaGAGGTCTGTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTTLRLP*RSVSVP
Trigger: TGGGACAGAGACAGACCTTCATGGGAGCCTGAGGGT...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GCACTTTCTGACGTATCAGTCCCAGGCGCATCAAGAGGGACTGGTAGTCAAAGTTTGTTATCACCTCAATaGGGCCAGGGTTTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ALSDVSVPGASRGTGSQSLLSPQ*GQGLRK
Trigger: CTTTCTCAAACCCTGGCCTCATTGAGGTGATAACAA...ACTTTGACTACCAGTCCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504684.5
CDS-3UTR CCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCACAGTTTGACCCGAGGTaGGTGGATGGGATAGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAQFDPR*VDGIVG
Trigger: CCCGACTATCCCATCCACCCACCTCGGGTCAAACTG...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACGGATCGGAGCTTGCTTaGTTCTTGCCATCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYGSELA*FLPSCR
Trigger: CCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCC...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp ACCCCAAGCTCCCTTCCAGGTATCCCCATAAATCATTaGGGCACACTCCCTCTTGGAATTGCAATTTCCATC +
Preference number: 4 (lower is better)
Translates to: TPSSLPGIPINH*GTLPLGIAISI
Trigger: GATGGAAATTGCAATTCCAAGAGGGAGTGTGCCCAAATGATTTATGGGGATACCTGGAAGGGAGCTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp TCTGCCCTATGGCAGGGCCAAGGAGAGGATTGTCACTaGAAAGTGGGAACACTTAAATGGATGACAGACAAC +
Preference number: 4 (lower is better)
Translates to: SALWQGQGEDCH*KVGTLKWMTDN
Trigger: GTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCCTTGGCCCTGCCATAGGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp AGGGTCCTGCATAGTTTGGCCTTGAAGGTGCAGGCGATCTTTGCAGGCCACCTCATTCATTATAGTTTTTaGTGTCTCCTGGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: RVLHSLALKVQAIFAGHLIHYSF*CLLDVS
Trigger: AGAGACATCCAGGAGACAGCAAAAACTATAATGAAT...GAGGTGGCCTGCAAAGATCGCCTGCACCTTCAAGGCCAAACTATGCAGGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAGGCCCTCGCTCTAGGTaGTCCTGTAAAGGTACCTTG +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAGPRSR*SCKGTL
Trigger: CAAGGTACCTTTACAGGAGCACCTAGAGCGAGGGCC...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAGCCATTGGCTACCCTTaGTCCCCAAAAATCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAAIGYP*SPKIPG
Trigger: CCCAGGGATTTTTGGGGAGCAAGGGTAGCCAATGGC...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GGAACTTTTCAAATCAGTGATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGACCCATCAGAGACAGTaGCAAGAGCAGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GTFQISDCGNKQYFQLLTTHQRQ*QEQLGA
Trigger: TGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGGGT...CGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATCACTGATTTGAAAAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GCTGTCTCCTGGATGTCTCTCCTGTTCAAAGCCGGGCTCATTGTGATAGGGGTTCCTTATAAATGGACATaGTATCCCTGTATAACACCA +
Preference number: 4 (lower is better)
Translates to: AVSWMSLLFKAGLIVIGVPYKWT*YPCITP
Trigger: TGGTGTTATACAGGGATATCATGTCCATTTATAAGG...AACCCCTATCACAATGAGCCCGGCTTTGAACAGGAGAGACATCCAGGAGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504684.5
CDS-3UTR GCA 90 bp CAAGATAAACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTTGGGCCTGTGATCAATaGATGAATCTTAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: QDKLPFPKPTNPCPVPLLWACDQ*MNLSHV
Trigger: GACATGACTAAGATTCATGCATTGATCACAGGCCCA...AAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGTTTATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCACCTGGGATCGGAGCTTaGTTGGTTCTTGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAPGIGA*LVLAIL
Trigger: CAAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGG...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACTTCAGCTTCTTACGGTaGCATGCAGGCTTTACCAAG +
Preference number: 4 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYFSFLR*HAGFTK
Trigger: CTTGGTAAAGCCTGCATGGCACCGTAAGAAGCTGAA...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp TCCCATATACACAGCAGCTGCCTGTGTTGGGAACTTTTCAAATCAGTGATTGCGCTGATACGGGATGAATaGATGAACGAAGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SHIHSSCLCWELFKSVIALIRDE*MNEAPD
Trigger: ATCTGGGGCTTCGTTCATCCATTCATCCCGTATCAG...CGCAATCACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCTGTGTATATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCATTATCCCTAAGGAGCTaGCCCTGTGGAGAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREALSLRS*PCGEVC
Trigger: ACACACCTCTCCACAGGGCCAGCTCCTTAGGGATAA...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GGGATCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAAAAACAAAATTATGCTaGCCTGTGGGAAATAATGGG +
Preference number: 4 (lower is better)
Translates to: GIGACLVLAILQDDFESGKTKLC*PVGNNG
Trigger: CCCATTATTTCCCACAGGCCAGCATAATTTTGTTTT...TCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp TCTGATGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTGTCTCCTGGATGAAAGGGGGAATCCCTTaGGCAGGACAGTTGTTATCA +
Preference number: 4 (lower is better)
Translates to: SDGLVPDTFIIVFAVSWMKGGIP*AGQLLS
Trigger: TGATAACAACTGTCCTGCTCAAGGGATTCCCCCTTT...CATCCAGGAGACAGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504684.5
CDS-3UTR GCA 90 bp TCTCCAGCACTTTCTGACGTATCAGTCCCAGGCGCATCAAGAGGGACTGGTAGTATTCATTATAGTTTTTaGTGTCTCCTGGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPALSDVSVPGASRGTGSIHYSF*CLLDVS
Trigger: AGAGACATCCAGGAGACAGCAAAAACTATAATGAAT...ACTACCAGTCCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp GACTGCAACTCTGATGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTGTCCATCATGTCACAGACTaGAACTCTGATGGTCTCGTG +
Preference number: 4 (lower is better)
Translates to: DCNSDGLVPDTFIIVFAVHHVTD*NSDGLV
Trigger: CACGAGACCATCAGAGTTGCAGTCTGTGACATGATG...GACAGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGAGTTGCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR GCA 90 bp AAGGTGCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAAAATCAGAGTCCATTTCTaGATTCTCATTATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: KVQAIFAGHLVEVVILQKIRVHF*ILIMEP
Trigger: AGGCTCCATAATGAGAATGCAGAAATGGACTCTGAT...TTTCTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR GCA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACCTGTCCCAGATGAACTaGTATCAGAGTCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYLSQMN*YQSPFL
Trigger: CAGAAATGGACTCTGATAGCAGTTCATCTGGGACAG...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTGGCATTGGGAAGCCCTaGTTCAAGACTGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTGIGKP*FKTEDR
Trigger: TCTGTCTTCAGTCTTGAAGCAGGGCTTCCCAATGCC...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp AAGGTGCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAAATACAACGAACATTCCTaGAGGAGGCTCCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: KVQAIFAGHLVEVVILQKYNEHS*RRLLIN
Trigger: ATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTA...TTTCTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR CCA 90 bp GAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTGAAGAGAGCAGCTGCCTGTGTTaGGAACTTTTCAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: EWKREIGSRVPFRSSCEESSCLC*ELFKSV
Trigger: CACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCT...CTCTTCACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGGATGACAGACAACACTaGACCCACAGACCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLGAITINLEVRGEHIKKDDRQH*THRPRA
Trigger: TGCTCTTGGTCTGTGGGTCCAGTGTTGTCTGTCATC...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp GTGGCTCTAATCCCATATACACAGCAGCTGCCTGTGTaGGGAACTTTTCAAATCAGTGATTGCGGGAACAAA +
Preference number: 4 (lower is better)
Translates to: VALIPYTQQLPV*GTFQISDCGNK
Trigger: TTTGTTCCCGCAATCACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCTGTGTATATGGGATTAGAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp GGAACTTTTCAAATCAGTGATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGAAGGATGGATTCCCTTaGTGCCCAGGATTACAGGGC +
Preference number: 4 (lower is better)
Translates to: GTFQISDCGNKQYFQLLTKDGFP*CPGLQG
Trigger: GCCCTGTAATCCTGGGCATCAAGGGAATCCATCCTT...CGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATCACTGATTTGAAAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp CCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGTTCCCCAAGCCCACCAATCATTCATTATAGTTTTTaGTGTCTCCTGGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: PASSRVSKINFRSPSPPIIHYSF*CLLDVS
Trigger: AGAGACATCCAGGAGACAGCAAAAACTATAATGAAT...GATTGGTGGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR GCA 90 bp GAGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATACTCCCTCTTGGAATTaGAATTTCCATCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: EALHHKNRQYPLGAITINTPSWN*NFHLPL
Trigger: AAGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGT...ATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTCATTCTTCTAAGCCCTaGAGTAGCTCGAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTHSSKP*SSSRNG
Trigger: TCCATTCCTCGAGCTACTCCAGGGCTTAGAAGAATG...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
3UTR CAA 72 bp AGCTTCTTACGGTGCCATGCAGGCTTTACCAAGACCTaGGTTAAGTCCCAGTCACATTTACTTTCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: SFLRCHAGFTKT*VKSQSHLLSVL
Trigger: TAAGACAGAAAGTAAATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGCCTGCATGGCACCGTAAGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAAATTATGCTGGCCTGTaGGAAATAATGGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREANYAGL*EIMGEG
Trigger: TCCTTCCCCCATTATTTCCCACAGGCCAGCATAATT...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CCA 90 bp AACTCTGATGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTGTCTCCTGGTACAACGAACATTCCTaGAGGAGGCTCCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: NSDGLVPDTFIIVFAVSWYNEHS*RRLLIN
Trigger: ATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTA...CCAGGAGACAGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR CCA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGGCTTTACCAAGACCTTaGTTAAGTCCCAGTCACATT +
Preference number: 4 (lower is better)
Translates to: PLGAITINLEVRGEHIKKALPRP*LSPSHI
Trigger: AATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGC...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR TCA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAGAGAGGATTGTCACTTaGAAGTGGGAACACTTAAAT +
Preference number: 4 (lower is better)
Translates to: FLSQPAKGSLQLNTDREAERIVT*KWEHLN
Trigger: ATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTC...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS GCA 90 bp GGCGCCCGCCGTTGCCGCCTCCTCAGTCGGACTCTCCGCCATCGCTaGTTCGCTTCCGGGACTACTCGGCAGCACGTCCGCCGACCAGAG +
Preference number: 5 (lower is better)
Translates to: GARRCRLLSRTLRHR*FASGTTRQHVRRPE
Trigger: CTCTGGTCGGCGGACGTGCTGCCGAGTAGTCCCGGAAGCGAAGCAGCGATGGCGGAGAGTCCGACTGAGGAGGCGGCAACGGCGGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp CCATCAGAGACAGTGACAAGAGCAGCTGGGGGCACGGGGGAGGCGGAAGGAAGAGAGCTTGCTTGGTTCTaGCCATCTTGCAGGATGACT +
Preference number: 5 (lower is better)
Translates to: PSETVTRAAGGTGEAEGRELAWF*PSCRMT
Trigger: AGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTC...TCTTCCTTCCGCCTCCCCCGTGCCCCCAGCTGCTCTTGTCACTGTCTCTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS TCA 90 bp GGCAGGTCCAGTCCATGTATGTGTTATTGCCCGTTGTCATCAGTTTaGCCCGAGGTGGGTGGATGGGATAGTCGGGCGGACACCGAAACA +
Preference number: 5 (lower is better)
Translates to: GRSSPCMCYCPLSSV*PEVGGWDSRADTET
Trigger: TGTTTCGGTGTCCGCCCGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACATACATGGACTGGACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS CCA 90 bp GTGGCACGAAGGGAAAGTATGATGAAAGGAGACGAAGAAAGGGATTaGAGGCCACAGCCCAGTGCCAGTAACACAGCAGGGTTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: VARRESMMKGDEERD*RPQPSASNTAGLGG
Trigger: ACCCCCTAACCCTGCTGTGTTACTGGCACTGGGCTGTGGCCTCCAATCCCTTTCTTCGTCTCCTTTCATCATACTTTCCCTTCGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS-3UTR CAA 90 bp CATCAAGAGGGACTGGTAGTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGGACATGATATCCCGCTaGATCCGGAGTAGACACTGC +
Preference number: 5 (lower is better)
Translates to: HQEGLVVKVAPLLSKRVLDMISR*IRSRHC
Trigger: GCAGTGTCTACTCCGGATCAAGCGGGATATCATGTC...CAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CAA 90 bp TTGAAGGTGCAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAGGGTCCTGCATAGTTaGGCCTTGAAGGTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LKVQAIFAGHLVEVVILQRVLHS*ALKVQA
Trigger: CGCCTGCACCTTCAAGGCCAAACTATGCAGGACCCT...CTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTGCACCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS CCA 90 bp AAACCTCACTGTGTTATTGCCCGTTGTCATCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCGGGCGGACACCGAAACACGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: KPHCVIARCHQFDPR*VDGIVGRTPKHEQE
Trigger: TTCCTGTTCGTGTTTCGGTGTCCGCCCGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACAGTGAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360943.10
ENST00000511373.1
ENST00000513342.5
CDS CCA 90 bp GTCCATGTATGTGTTATTGCCCGTTGTCATCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCGGGCGGACACCGAAACACGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: VHVCVIARCHQFDPR*VDGIVGRTPKHEQE
Trigger: TTCCTGTTCGTGTTTCGGTGTCCGCCCGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACATACATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CAA 90 bp AGGGGAAGGATGGATTCCCTTGATGCCCAGGATTACAGGGCACCTAAAGCACATGGGAGGAAAAGGGCATaGGGAAGCCCTGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: RGRMDSLDAQDYRAPKAHGRKRA*GSPASR
Trigger: TCTTGAAGCAGGGCTTCCCAATGCCCTTTTCCTCCC...ATGTGCTTTAGGTGCCCTGTAATCCTGGGCATCAAGGGAATCCATCCTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp CCAGCCTCTTCAAGGGTATCCAAGATAAACTTCCGTTCCCCAAGCCCACCAATCGACATGATATCCCGCTaGATCCGGAGTAGACACTGC +
Preference number: 5 (lower is better)
Translates to: PASSRVSKINFRSPSPPIDMISR*IRSRHC
Trigger: GCAGTGTCTACTCCGGATCAAGCGGGATATCATGTC...GATTGGTGGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp CTCGAGGAATGGAAGAGGGAAATTGGAAGCAGGGTCCCTTTTCGATCTTCATGTCCCGTTGTCATCAGTTaGACCCGAGGTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LEEWKREIGSRVPFRSSCPVVIS*TRGGWM
Trigger: CATCCACCCACCTCGGGTCAAACTGATGACAACGGG...ACATGAAGATCGAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATTCCTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp CAAGATAAACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTTGCCATTGGCTACCCTaGCTCCCCAAAAATCCCTGG +
Preference number: 5 (lower is better)
Translates to: QDKLPFPKPTNPCPVPLLCHWLP*LPKNPW
Trigger: CCAGGGATTTTTGGGGAGCAAGGGTAGCCAATGGCA...AAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGTTTATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp GTCAAAGTGGCCCCGCTTCTCTCCAAAAGGGTCCTGCATAGTTTGGCCTTGAAGGAAAGGGGGAATCCCTaGAGCAGGACAGTTGTTATC +
Preference number: 5 (lower is better)
Translates to: VKVAPLLSKRVLHSLALKERGNP*SRTVVI
Trigger: GATAACAACTGTCCTGCTCAAGGGATTCCCCCTTTC...CTTCAAGGCCAAACTATGCAGGACCCTTTTGGAGAGAAGCGGGGCCACTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504684.5
CDS-3UTR CAA 90 bp AACCCAGGCTTAGCTGTGTCATTCTATGACAGCTGTCGATGCCACGCTTGTGGGTATTACCTGCATAGTTaGGCCTTGAAGGTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: NPGLAVSFYDSCRCHACGYYLHS*ALKVQA
Trigger: CGCCTGCACCTTCAAGGCCAAACTATGCAGGTAATA...CCCACAAGCGTGGCATCGACAGCTGTCATAGAATGACACAGCTAAGCCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514948.1
CDS CCA 90 bp TCTGCTTGCTTCCTCTGCAGAGGATCAAACCTATTGTGGAGGATGTaGCTCAGGCAGCACATCATGACTGAAAATGGGGAAGACTCAGGG +
Preference number: 5 (lower is better)
Translates to: SACFLCRGSNLLWRM*LRQHIMTENGEDSG
Trigger: CCCTGAGTCTTCCCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGTTTGATCCTCTGCAGAGGAAGCAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS-3UTR CAA 90 bp GAGGCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCCCTGGGATCGGAGCTaGCTTGGTTCTTGCCATCTT +
Preference number: 5 (lower is better)
Translates to: EALHHKNRQYPLGAITINPWDRS*LGSCHL
Trigger: AAGATGGCAAGAACCAAGCAAGCTCCGATCCCAGGG...ATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp TCGGAGCTTGCTTGGTTCTTGCCATCTTGCAGGATGACTTCGAGTCTGGAGGGAAATGGAAGAGGGAAATaGGAAGCAGGGTCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SELAWFLPSCRMTSSLEGNGRGK*EAGSLF
Trigger: GAAAAGGGACCCTGCTTCCAATTTCCCTCTTCCATT...TCCCTCCAGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAAGCAAGCTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp ACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTCCTGCCCTGGAGAGGATTGTCACTaGAAAGTGGGAACACTTAAA +
Preference number: 5 (lower is better)
Translates to: TSVPQAHQSLSSSFASCPGEDCH*KVGTLK
Trigger: TTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC...AGGGCAGGAAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS TCA 90 bp ATCAAACCTATTGTGGAGGATGTGGCTCAGGCAGCACATCATGACTaGAAATGGGGAAGACTCAGGGTCCACTCAGAGCCATTAGACCAG +
Preference number: 5 (lower is better)
Translates to: IKPIVEDVAQAAHHD*KWGRLRVHSEPLDQ
Trigger: CTGGTCTAATGGCTCTGAGTGGACCCTGAGTCTTCCCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 90 bp GAGGATCAAACCTATTGTGGAGGATGTGGCTCAGGCAGCACATCATaGCTGAAAATGGGGAAGACTCAGGGTCCACTCAGAGCCATTAGA +
Preference number: 5 (lower is better)
Translates to: EDQTYCGGCGSGSTS*LKMGKTQGPLRAIR
Trigger: TCTAATGGCTCTGAGTGGACCCTGAGTCTTCCCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGTTTGATCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS-3UTR CAA 90 bp TCTGATGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTGTCTCCTGGATGCCCGTTGTCATCAGTTaGACCCGAGGTGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: SDGLVPDTFIIVFAVSWMPVVIS*TRGGWM
Trigger: CATCCACCCACCTCGGGTCAAACTGATGACAACGGG...CATCCAGGAGACAGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS-3UTR CAA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACGGGATCGGAGCTTGCTaGGTTCTTGCCATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYGIGAC*VLAILQ
Trigger: CTGCAAGATGGCAAGAACCAAGCAAGCTCCGATCCC...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS TCA 90 bp CAGGTACAACGAACATTCCTGGAGGAGGCTCCTTATAAATGGACATaGTATCCCTGTATAACACCAAGAGGAGGTGGGGGAAGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: QVQRTFLEEAPYKWT*YPCITPRGGGGRSE
Trigger: CTCACTCCTTCCCCCACCTCCTCTTGGTGTTATACAGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000511373.1
CDS GCA 90 bp AAACCCTCAGGCTCCCATGAAGGTCTGTCTCTGTCCCAGATGAACTaGTATCAGAGTCCATTTCTGCATTCTCATTATGGAGCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KPSGSHEGLSLSQMN*YQSPFLHSHYGASP
Trigger: TGGAGAGGCTCCATAATGAGAATGCAGAAATGGACTCTGATAGCAGTTCATCTGGGACAGAGACAGACCTTCATGGGAGCCTGAGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360943.10
ENST00000506271.1
ENST00000513342.5
CDS CCA 90 bp CGTGGCAATCCAATGCCTAAGTCTATAGTTCCCACCTTGCCCTCCTaGCAAGACCCTACGTCATATTCTGGCTCTCAGTCATTTGGAATA +
Preference number: 5 (lower is better)
Translates to: RGNPMPKSIVPTLPS*QDPTSYSGSQSFGI
Trigger: TATTCCAAATGACTGAGAGCCAGAATATGACGTAGGGTCTTGCCAGGAGGGCAAGGTGGGAACTATAGACTTAGGCATTGGATTGCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS-3UTR CAA 90 bp TTTCTGAGCCAACCAGCTAAAGGATCACTGCAGCTAAATACAGATAGAGAAGCAAGGGTCCTGCATAGTTaGGCCTTGAAGGTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: FLSQPAKGSLQLNTDREARVLHS*ALKVQA
Trigger: CGCCTGCACCTTCAAGGCCAAACTATGCAGGACCCT...TGCTTCTCTATCTGTATTTAGCTGCAGTGATCCTTTAGCTGGTTGGCTCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp ACAGACTGCAACTCTGATGGTCTCGTGCCGGATACATTCATTATAGTTTTTGCTAGGGTCCTGCATAGTTaGGCCTTGAAGGTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: TDCNSDGLVPDTFIIVFARVLHS*ALKVQA
Trigger: CGCCTGCACCTTCAAGGCCAAACTATGCAGGACCCT...AGCAAAAACTATAATGAATGTATCCGGCACGAGACCATCAGAGTTGCAGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000506498.5
CDS-3UTR CAA 90 bp CAAGATAAACTTCCGTTCCCCAAGCCCACCAATCCCTGTCCAGTTCCTTTGCTTTTGGTTCTTGCCATCTaGCAGGATGACTTCGAGTCT +
Preference number: 5 (lower is better)
Translates to: QDKLPFPKPTNPCPVPLLLVLAI*QDDFES
Trigger: AGACTCGAAGTCATCCTGCAAGATGGCAAGAACCAA...AAGCAAAGGAACTGGACAGGGATTGGTGGGCTTGGGGAACGGAAGTTTATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp GCCCTGCATCACAAGAATCGCCAATACCCACTGGGAGCCATAACAATAAATCTGTGGGCACACTCCCTCTaGGAATTGCAATTTCCATCT +
Preference number: 5 (lower is better)
Translates to: ALHHKNRQYPLGAITINLWAHSL*ELQFPS
Trigger: AGATGGAAATTGCAATTCCAAGAGGGAGTGTGCCCA...CAGATTTATTGTTATGGCTCCCAGTGGGTATTGGCGATTCTTGTGATGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp GGAGAGGATTGTCACTTGAAAGTGGGAACACTTAAATGGATGACAGACAACACTGGGCCAAGGAGAGGATaGTCACTTGAAAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: GEDCHLKVGTLKWMTDNTGPRRG*SLESGN
Trigger: GTTCCCACTTTCAAGTGACAATCCTCTCCTTGGCCC...AGTGTTGTCTGTCATCCATTTAAGTGTTCCCACTTTCAAGTGACAATCCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp CAGGCGATCTTTGCAGGCCACCTCGTAGAAGTCGTAATACTCCAGAAAGGACTTTCCATGTATGTGTTATaGCCCGTTGTCATCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QAIFAGHLVEVVILQKGLSMYVL*PVVISL
Trigger: CAAACTGATGACAACGGGCAATAACACATACATGGA...AAGTCCTTTCTGGAGTATTACGACTTCTACGAGGTGGCCTGCAAAGATCGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS TCA 90 bp TCTTCTTCCACAAAGGCTCCTAGGCATTTAGGTCTGCTAAGCATTTaGACAGCAAAAGGAAAGGGACGTGGCAATCCAATGCCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: SSSTKAPRHLGLLSI*TAKGKGRGNPMPKS
Trigger: AGACTTAGGCATTGGATTGCCACGTCCCTTTCCTTTTGCTGTTCAAATGCTTAGCAGACCTAAATGCCTAGGAGCCTTTGTGGAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS-3UTR CAA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGCTGCATAGTTTGGCCTaGAAGGTGCAGGCGATCTTT +
Preference number: 5 (lower is better)
Translates to: PLGAITINLEVRGEHIKKLHSLA*KVQAIF
Trigger: AAAGATCGCCTGCACCTTCAAGGCCAAACTATGCAG...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACCTGTGGAGAGGTGTGTaGGTTGTTTTGTTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYLWRGV*VVLFLP
Trigger: TGGCAAAAACAAAACAACCAACACACCTCTCCACAG...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp GATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGTGCCATGCAGGCTTTACCACTCCCTCTTGGAATaGCAATTTCCATCTTCCACT +
Preference number: 5 (lower is better)
Translates to: DCGNKQYFQLLTVPCRLYHSLLE*QFPSST
Trigger: AGTGGAAGATGGAAATTGCAATTCCAAGAGGGAGTG...GTAAAGCCTGCATGGCACCGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS TCA 90 bp GTACCGCAAGTGTTTGTACTGTCTTGTTGGCTGAGAAATCTCAGCTaGGTACTTGTCAGGCAGGCAGAGAGCAAATTATTATCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: VPQVFVLSCWLRNLS*VLVRQAESKLLSKG
Trigger: CCCTTTTGATAATAATTTGCTCTCTGCCTGCCTGACAAGTACTCAGCTGAGATTTCTCAGCCAACAAGACAGTACAAACACTTGCGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511373.1
CDS CCA 90 bp CCGAAACACGAACAGGAAGAAACCCCCTTCATAAGGAGTGTCAAATaGGCCTGTGATCAATGCATGAATCTTAGTCATGTCAACAGTATC +
Preference number: 5 (lower is better)
Translates to: PKHEQEETPFIRSVK*ACDQCMNLSHVNSI
Trigger: GATACTGTTGACATGACTAAGATTCATGCATTGATCACAGGCCCATTTGACACTCCTTATGAAGGGGGTTTCTTCCTGTTCGTGTTTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360943.10
ENST00000506498.5
ENST00000511373.1
CDS-3UTR CAA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGATCCCCATAAATCATTaGGGCACACTCCCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: PLGAITINLEVRGEHIKKIPINH*GTLPLG
Trigger: TCCAAGAGGGAGTGTGCCCAAATGATTTATGGGGAT...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp CCACTGGGAGCCATAACAATAAATCTGGAAGTACGGGGAGAACATATCAAAAAGCAGCAGCTGCCTGTGTaGGGAACTTTTCAAATCAGT +
Preference number: 5 (lower is better)
Translates to: PLGAITINLEVRGEHIKKQQLPV*GTFQIS
Trigger: ACTGATTTGAAAAGTTCCCAACACAGGCAGCTGCTG...CTTTTTGATATGTTCTCCCCGTACTTCCAGATTTATTGTTATGGCTCCCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS TCA 90 bp AGAATAGGGAACAAGTACCCTGGGGCCCGGCAACACCACCATAAGTaGCTCACCATAAGTTTCTCTTTCACTATTAATACTCTGGAATTT +
Preference number: 5 (lower is better)
Translates to: RIGNKYPGARQHHHK*LTISFSFTINTLEF
Trigger: AAATTCCAGAGTATTAATAGTGAAAGAGAAACTTATGGTGAGTCACTTATGGTGGTGTTGCCGGGCCCCAGGGTACTTGTTCCCTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506271.1
CDS CCA 90 bp ATGAATCTTAGTCATGTCAACAGTATCAGGTACAACGAACATTCCTaGAGGAGGCTCCTTATAAATGGACATGATATCCCGCTTGATCCG +
Preference number: 5 (lower is better)
Translates to: MNLSHVNSIRYNEHS*RRLLINGHDIPLDP
Trigger: CGGATCAAGCGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTACCTGATACTGTTGACATGACTAAGATTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360943.10
ENST00000506498.5
CDS-3UTR CAA 90 bp GGAACTTTTCAAATCAGTGATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGGCTTTACCAAGACCTaGGTTAAGTCCCAGTCACAT +
Preference number: 5 (lower is better)
Translates to: GTFQISDCGNKQYFQLLTGFTKT*VKSQSH
Trigger: ATGTGACTGGGACTTAACCAAGGTCTTGGTAAAGCC...CGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATCACTGATTTGAAAAGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS-3UTR CAA 90 bp GGAACTTTTCAAATCAGTGATTGCGGGAACAAACAGTATTTTCAGCTTCTTACGGGAGAGGTGTGTTGGTaGTTTTGTTTTTGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: GTFQISDCGNKQYFQLLTGEVCW*FCFCQR
Trigger: CCTTTGGCAAAAACAAAACAACCAACACACCTCTCC...CGTAAGAAGCTGAAAATACTGTTTGTTCCCGCAATCACTGATTTGAAAAGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS GCA 90 bp GAAGCAGAGTCCATAATCTGGTACACATGTTCTATATCCTCACCATaGAGAAGGAACATCCTGTATTCACTCATACTAATACGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: EAESIIWYTCSISSP*RRNILYSLILIRRF
Trigger: AAACCTACGTATTAGTATGAGTGAATACAGGATGTTCCTTCTGCATGGTGAGGATATAGAACATGTGTACCAGATTATGGACTCTGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 90 bp CTAATACGTAGGTTTGGAATTTTAAGAAATCTCATTACAGTGGAATaGCATCTTACTCAGGGGTTACTTCTAAAGTTAGAGCCCAAGGCG +
Preference number: 5 (lower is better)
Translates to: LIRRFGILRNLITVE*HLTQGLLLKLEPKA
Trigger: CGCCTTGGGCTCTAACTTTAGAAGTAACCCCTGAGTAAGATGTCATTCCACTGTAATGAGATTTCTTAAAATTCCAAACCTACGTATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS CCA 72 bp TCGCCGTCCCAGTCGGAGCTGAGCGTGGGGTCCCAGTaGCTAAGCAGCGCGGCCCCGTGGGCAGCGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPSQSELSVGSQ*LSSAAPWAAAE
Trigger: CTCAGCCGCTGCCCACGGGGCCGCGCTGCTTAGCCACTGGGACCCCACGCTCAGCTCCGACTGGGACGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360943.10
ENST00000508468.2
CDS GCA 72 bp CGTTGCCGCCTCCTCAGTCGGACTCTCCGCCATCGCTaGTTCGCTTCCGGGACTACTCGGCAGCACGTCCGC +
Preference number: 6 (lower is better)
Translates to: RCRLLSRTLRHR*FASGTTRQHVR
Trigger: GCGGACGTGCTGCCGAGTAGTCCCGGAAGCGAAGCAGCGATGGCGGAGAGTCCGACTGAGGAGGCGGCAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360943.10
CDS GCA 72 bp GGTCCAGTCCATGTACGCTTGATCCGGAGTAGACACTaGGGCGCGGTGCGCTCGCCGTCCCAGTCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GPVHVRLIRSRH*GAVRSPSQSEL
Trigger: CAGCTCCGACTGGGACGGCGAGCGCACCGCGCCGCAGTGTCTACTCCGGATCAAGCGTACATGGACTGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508468.2
CDS GCA 72 bp ATGGACATGATATCCCGCTTGATCCGGAGTAGACACTaGGGCGCGGTGCGCTCGCCGTCCCAGTCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: MDMISRLIRSRH*GAVRSPSQSEL
Trigger: CAGCTCCGACTGGGACGGCGAGCGCACCGCGCCGCAGTGTCTACTCCGGATCAAGCGGGATATCATGTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360943.10
ENST00000506498.5
CDS CCA 72 bp CAAAATTGTGAGGTGATGACCCACCCCAAGCCCTCCTaGCTACCCTCCACCTACTACCCACACCAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: QNCEVMTHPKPS*LPSTYYPHQKQ
Trigger: CTGCTTCTGGTGTGGGTAGTAGGTGGAGGGTAGCCAGGAGGGCTTGGGGTGGGTCATCACCTCACAATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS CCA 72 bp TGTGTTATTGCCCGTTGTCATCAGTTTGACCCGAGGTaGGTGGATGGGATAGTCGGGCGGACACCGAAACAC +
Preference number: 6 (lower is better)
Translates to: CVIARCHQFDPR*VDGIVGRTPKH
Trigger: GTGTTTCGGTGTCCGCCCGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360943.10
ENST00000506498.5
ENST00000511373.1
ENST00000513342.5
CDS TCA 72 bp AGTCCATGTATGTGTTATTGCCCGTTGTCATCAGTTTaGCCCGAGGTGGGTGGATGGGATAGTCGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: SPCMCYCPLSSV*PEVGGWDSRAD
Trigger: GTCCGCCCGACTATCCCATCCACCCACCTCGGGTCAAACTGATGACAACGGGCAATAACACATACATGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506498.5
CDS TCA 72 bp ATTGTGGAGGATGTGGCTCAGGCAGCACATCATGACTaGAAATGGGGAAGACTCAGGGTCCACTCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: IVEDVAQAAHHD*KWGRLRVHSEP
Trigger: TGGCTCTGAGTGGACCCTGAGTCTTCCCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 72 bp ACCTATTGTGGAGGATGTGGCTCAGGCAGCACATCATaGCTGAAAATGGGGAAGACTCAGGGTCCACTCAGA +
Preference number: 6 (lower is better)
Translates to: TYCGGCGSGSTS*LKMGKTQGPLR
Trigger: TCTGAGTGGACCCTGAGTCTTCCCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS CCA 72 bp CCAATGCCTAAGTCTATAGTTCCCACCTTGCCCTCCTaGCAAGACCCTACGTCATATTCTGGCTCTCAGTCA +
Preference number: 6 (lower is better)
Translates to: PMPKSIVPTLPS*QDPTSYSGSQS
Trigger: TGACTGAGAGCCAGAATATGACGTAGGGTCTTGCCAGGAGGGCAAGGTGGGAACTATAGACTTAGGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS CAA 90 bp ATGCCTAGGGTATCTGCTTGCTTCCTCTGCAGAGGATCAAACCTATaGTGGAGGATGTGGCTCAGGCAGCACATCATGACTGAAAATGGG +
Preference number: 6 (lower is better)
Translates to: MPRVSACFLCRGSNL*WRMWLRQHIMTENG
Trigger: CCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGTTTGATCCTCTGCAGAGGAAGCAAGCAGATACCCTAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 72 bp GCTTGGTACCGCAAGTGTTTGTACTGTCTTGTTGGCTaGGAAATCTCAGCTGAGTACTTGTCAGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: AWYRKCLYCLVG*EISAEYLSGRQ
Trigger: CTGCCTGCCTGACAAGTACTCAGCTGAGATTTCTCAGCCAACAAGACAGTACAAACACTTGCGGTACCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511373.1
CDS CAA 72 bp GTATCTGCTTGCTTCCTCTGCAGAGGATCAAACCTATaGTGGAGGATGTGGCTCAGGCAGCACATCATGACT +
Preference number: 6 (lower is better)
Translates to: VSACFLCRGSNL*WRMWLRQHIMT
Trigger: AGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGTTTGATCCTCTGCAGAGGAAGCAAGCAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 72 bp CGAACATTCCTGGAGGAGGCTCCTTATAAATGGACATaGTATCCCTGTATAACACCAAGAGGAGGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: RTFLEEAPYKWT*YPCITPRGGGG
Trigger: TCCCCCACCTCCTCTTGGTGTTATACAGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000511373.1
CDS CCA 72 bp CACCTTGCCCTCCTGGCAAGACCCTACGTCATATTCTaGCTCTCAGTCATTTGGAATAGTAAACTCAACTGG +
Preference number: 6 (lower is better)
Translates to: HLALLARPYVIF*LSVIWNSKLNW
Trigger: CCAGTTGAGTTTACTATTCCAAATGACTGAGAGCCAGAATATGACGTAGGGTCTTGCCAGGAGGGCAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS CCA 72 bp TTCCTCTGCAGAGGATCAAACCTATTGTGGAGGATGTaGCTCAGGCAGCACATCATGACTGAAAATGGGGAA +
Preference number: 6 (lower is better)
Translates to: FLCRGSNLLWRM*LRQHIMTENGE
Trigger: TTCCCCATTTTCAGTCATGATGTGCTGCCTGAGCCACATCCTCCACAATAGGTTTGATCCTCTGCAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS GCA 72 bp GGCTCCCATGAAGGTCTGTCTCTGTCCCAGATGAACTaGTATCAGAGTCCATTTCTGCATTCTCATTATGGA +
Preference number: 6 (lower is better)
Translates to: GSHEGLSLSQMN*YQSPFLHSHYG
Trigger: TCCATAATGAGAATGCAGAAATGGACTCTGATAGCAGTTCATCTGGGACAGAGACAGACCTTCATGGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360943.10
ENST00000506271.1
ENST00000513342.5
CDS CCA 72 bp TTCTGGCTCTCAGTCATTTGGAATAGTAAACTCAACTaGTCTCAACATGGCATCAACTCTGGGACCCCAGGT +
Preference number: 6 (lower is better)
Translates to: FWLSVIWNSKLN*SQHGINSGTPG
Trigger: ACCTGGGGTCCCAGAGTTGATGCCATGTTGAGACCAGTTGAGTTTACTATTCCAAATGACTGAGAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 72 bp ACAAAGGCTCCTAGGCATTTAGGTCTGCTAAGCATTTaGACAGCAAAAGGAAAGGGACGTGGCAATCCAATG +
Preference number: 6 (lower is better)
Translates to: TKAPRHLGLLSI*TAKGKGRGNPM
Trigger: CATTGGATTGCCACGTCCCTTTCCTTTTGCTGTTCAAATGCTTAGCAGACCTAAATGCCTAGGAGCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 72 bp AACAAGTACCCTGGGGCCCGGCAACACCACCATAAGTaGCTCACCATAAGTTTCTCTTTCACTATTAATACT +
Preference number: 6 (lower is better)
Translates to: NKYPGARQHHHK*LTISFSFTINT
Trigger: AGTATTAATAGTGAAAGAGAAACTTATGGTGAGTCACTTATGGTGGTGTTGCCGGGCCCCAGGGTACTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506271.1
CDS CCA 72 bp AGTCATGTCAACAGTATCAGGTACAACGAACATTCCTaGAGGAGGCTCCTTATAAATGGACATGATATCCCG +
Preference number: 6 (lower is better)
Translates to: SHVNSIRYNEHS*RRLLINGHDIP
Trigger: CGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTACCTGATACTGTTGACATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360943.10
ENST00000506498.5
CDS CCA 72 bp GAACAGGAAGAAACCCCCTTCATAAGGAGTGTCAAATaGGCCTGTGATCAATGCATGAATCTTAGTCATGTC +
Preference number: 6 (lower is better)
Translates to: EQEETPFIRSVK*ACDQCMNLSHV
Trigger: GACATGACTAAGATTCATGCATTGATCACAGGCCCATTTGACACTCCTTATGAAGGGGGTTTCTTCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360943.10
ENST00000506498.5
ENST00000511373.1
CDS TCA 72 bp ACCCCAGGTACTAGGCTATTAACACTGGTACTTGACTaGGGACGAGATGTCCTAGGAAAAACATTTCTAACT +
Preference number: 6 (lower is better)
Translates to: TPGTRLLTLVLD*GRDVLGKTFLT
Trigger: AGTTAGAAATGTTTTTCCTAGGACATCTCGTCCTCAGTCAAGTACCAGTGTTAATAGCCTAGTACCTGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS CCA 72 bp AGTCATGTCAACAGTATCAGGTACAACGAACATTCCTaGAGGAGGCTCCTTATAAATGGACATGATATCCCT +
Preference number: 6 (lower is better)
Translates to: SHVNSIRYNEHS*RRLLINGHDIP
Trigger: AGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGTTCGTTGTACCTGATACTGTTGACATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504684.5
ENST00000511373.1
CDS CCA 72 bp GAACAGGAAGAAACCCCCTTCATAAGGAGTGTCAAATaGGCCTGTGATCAATGCATGAATCTGCAAAATAAA +
Preference number: 6 (lower is better)
Translates to: EQEETPFIRSVK*ACDQCMNLQNK
Trigger: TTTATTTTGCAGATTCATGCATTGATCACAGGCCCATTTGACACTCCTTATGAAGGGGGTTTCTTCCTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS GCA 72 bp CTATTAATACTCTGGAATTTCCCAGCCTCTGTCTCATaGTCATGTTCTGATTTCACCAGAAATCAGTCAATT +
Preference number: 6 (lower is better)
Translates to: LLILWNFPASVS*SCSDFTRNQSI
Trigger: AATTGACTGATTTCTGGTGAAATCAGAACATGAGCATGAGACAGAGGCTGGGAAATTCCAGAGTATTAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506271.1
CDS GCA 72 bp TCCATAATCTGGTACACATGTTCTATATCCTCACCATaGAGAAGGAACATCCTGTATTCACTCATACTAATA +
Preference number: 6 (lower is better)
Translates to: SIIWYTCSISSP*RRNILYSLILI
Trigger: TATTAGTATGAGTGAATACAGGATGTTCCTTCTGCATGGTGAGGATATAGAACATGTGTACCAGATTATGGA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513342.5
CDS TCA 72 bp AGGTTTGGAATTTTAAGAAATCTCATTACAGTGGAATaGCATCTTACTCAGGGGTTACTTCTAAAGTTAGAG +
Preference number: 6 (lower is better)
Translates to: RFGILRNLITVE*HLTQGLLLKLE
Trigger: CTCTAACTTTAGAAGTAACCCCTGAGTAAGATGTCATTCCACTGTAATGAGATTTCTTAAAATTCCAAACCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513342.5