Pregenerated sensors for UBE2V2 (Homo sapiens)
Ensembl gene IDs: ENSG00000169139Ensembl transcript IDs: ENST00000520595.2, ENST00000521346.5, ENST00000523111.7
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTCCTCTCTATCTGGAATGTTCTCCATCCCCATCACCACCTTCTaGAATCCTACCAGTCAGTCCTTTAGGGATCATTCCAAAGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: FSSLSGMFSIPITTF*NPTSQSFRDHSKGN Trigger: GTTGCCTTTGGAATGATCCCTAAAGGACTGACTGGTAGGATTTCAGAAGGTGGTGATGGGGATGGAGAACATTCCAGATAGAGAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520595.2 |
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| 3UTR TCA 90 bp | GTACCTAATACAGTCACATGCTCATTAAAAGAGTTGATACAGTTTTaGTGGCAGGCTACAGTTCCCTGCTGTCTTTCCATGATGCATCAG | + |
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Preference number: 1 (lower is better) Translates to: VPNTVTCSLKELIQF*WQATVPCCLSMMHQ Trigger: CTGATGCATCATGGAAAGACAGCAGGGAACTGTAGCCTGCCATCAAAACTGTATCAACTCTTTTAATGAGCATGTGACTGTATTAGGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR GCA 90 bp | TTTTCTATATTAATTCCTCTTACAGTCTCCCAGTGTGTCTTAGATTaGCAAGTACATCTTGATTGTGACATGCAAAATGGATTCTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: FSILIPLTVSQCVLD*QVHLDCDMQNGFCF Trigger: AAAGCAGAATCCATTTTGCATGTCACAATCAAGATGTACTTGGCAATCTAAGACACACTGGGAGACTGTAAGAGGAATTAATATAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCACAATGGTGGATTTGGGGGAAGGAAACAGGACAAGAGACTGAGGTACCCAAGCCTCCCGAGTAGCTaGGACTACAAGTACCCACCA | + |
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Preference number: 2 (lower is better) Translates to: LHNGGFGGRKQDKRLRYPSLPSS*DYKYPP Trigger: TGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCT...TGGGTACCTCAGTCTCTTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTCTGGTCTCAAGCTCCTaGCCTCAAGTGATCTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: LSFHDASAEPFKATHTKPLVSSS*PQVICP Trigger: CGGGCAGATCACTTGAGGTCAGGAGCTTGAGACCAG...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTGTGCGCTCTCGGCACTaGAACCTCTGTCTGCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LSFHDASAEPFKATHTKPVRSRH*NLCLPV Trigger: AACTGGCAGACAGAGGTTGCAGTGCCGAGAGCGCAC...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCACAATGGTGGATTTGGGGGAAGGAAACAGGACAAGAGACTGAGGTACCCATTTGAAGTGAAACAGTaGCCTAAAGCCTCACGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LHNGGFGGRKQDKRLRYPFEVKQ*PKASRH Trigger: GTGACGTGAGGCTTTAGGTCACTGTTTCACTTCAAA...TGGGTACCTCAGTCTCTTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTACTGCAACCTCTGTCTaGCAGTTTCAAGTAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSFHDASAEPFKATHTKPTATSV*QFQVVL Trigger: GAGAACTACTTGAAACTGGCAGACAGAGGTTGCAGT...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTTCACAATGGTGGATTTaGGGGAAGGAAACAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: LSFHDASAEPFKATHTKPSQWWI*GKETGQ Trigger: TTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGA...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTTTGGCAACTTCACAATaGTGGATTTGGGGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LSFHDASAEPFKATHTKPLATSQ*WIWGKE Trigger: TTCCTTCCCCCAAATCCACCATTGTGAAGTTGCCAA...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACCTGACAACATGTACTTaGCAGGGGAAGGCGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KSSAFRSIPAINDTMILHLTTCT*QGKAAG Trigger: CCCTGCCGCCTTCCCCTGCCAAGTACATGTTGTCAG...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACAACAGGACAAGAGACTaGGGTACCCAGACCCTCATC | + |
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Preference number: 2 (lower is better) Translates to: KSSAFRSIPAINDTMILHNRTRD*GTQTLI Trigger: GATGAGGGTCTGGGTACCTCAGTCTCTTGTCCTGTT...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTCAGTGTGTCTTAGATTaGCAAGTACATCTTGATTGT | + |
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Preference number: 2 (lower is better) Translates to: LSFHDASAEPFKATHTKPQCVLD*QVHLDC Trigger: ACAATCAAGATGTACTTGGCAATCTAAGACACACTG...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACCCTGCTGTCTTTCCATaGTGCATCAGCAGAACCATT | + |
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Preference number: 2 (lower is better) Translates to: KSSAFRSIPAINDTMILHPAVFP*CISRTI Trigger: AATGGTTCTGCTGATGCATCATGGAAAGACAGCAGG...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCTACAATAATTCCAATTTTTGCTTCCCTGGCAAGGTACTGTACATATACAAATGGCACAGTCTCTaGGGACACGTTTCACATTTT | + |
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Preference number: 2 (lower is better) Translates to: KSYNNSNFCFPGKVLYIYKWHSL*GHVSHF Trigger: AAAATGTGAAACGTGTCCTCAGAGACTGTGCCATTT...GTATATGTACAGTACCTTGCCAGGGAAGCAAAAATTGGAATTATTGTAGCTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTTCTGACAACATGTACTaGGCAGGGGAAGGCGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LSFHDASAEPFKATHTKPSDNMY*AGEGGR Trigger: CCTGCCGCCTTCCCCTGCCAAGTACATGTTGTCAGA...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CAA 90 bp | CTTCACAATGGTGGATTTGGGGGAAGGAAACAGGACAAGAGACTGAGGTACCCACCTTTCAGGGCATGTTaGAGAAATGTGCTCTACTAT | + |
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Preference number: 3 (lower is better) Translates to: LHNGGFGGRKQDKRLRYPPFRAC*RNVLYY Trigger: ATAGTAGAGCACATTTCTCAAACATGCCCTGAAAGG...TGGGTACCTCAGTCTCTTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR-3UTR CAA 90 bp | TTTTCAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCCAGGGTTTCATCATGTaGGCCAGGCTGGTCTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: FSKWKGGYQRDGFRSSVTQGFIM*ARLVSS Trigger: GCTTGAGACCAGCCTGGCCAACATGATGAAACCCTG...GGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| 3UTR TCA 72 bp | ACAAAGCTTTGGATCCAGTACTTTGAAGTGAAACAGTaGCCTAAAGCCTCACGTCACTTTGGTGAAAGCGGA | + |
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Preference number: 3 (lower is better) Translates to: TKLWIQYFEVKQ*PKASRHFGESG Trigger: TCCGCTTTCACCAAAGTGACGTGAGGCTTTAGGTCACTGTTTCACTTCAAAGTACTGGATCCAAAGCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | CTTCACAATGGTGGATTTGGGGGAAGGAAACAGGACAAGAGACTGAGGTACCCAGAGTTGATACAGTTTTaGTGGCAGGCTACAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LHNGGFGGRKQDKRLRYPELIQF*WQATVP Trigger: GGGAACTGTAGCCTGCCATCAAAACTGTATCAACTC...TGGGTACCTCAGTCTCTTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | ATTTGTCTTTTCTCCTCTCTATCTGGAATGTTCTCCATCCCCATCACCACCTTCCCCATCACCACCTTCTaGAATCCTACCAGTCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: ICLFSSLSGMFSIPITTFPITTF*NPTSQS Trigger: GGACTGACTGGTAGGATTTCAGAAGGTGGTGATGGG...GAAGGTGGTGATGGGGATGGAGAACATTCCAGATAGAGAGGAGAAAAGACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000520595.2 |
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| CDS-3UTR CCA 90 bp | CAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCATTACTGACAACATGTACTTaGCAGGGGAAGGCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QNGKEVIRETDSDHQLPLLTTCT*QGKAAG Trigger: CCCTGCCGCCTTCCCCTGCCAAGTACATGTTGTCAG...TAATGGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | CTTCACAATGGTGGATTTGGGGGAAGGAAACAGGACAAGAGACTGAGGTACCCACTTTCAGGGCATGTTTaGGAAATGTGCTCTACTATA | + |
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Preference number: 4 (lower is better) Translates to: LHNGGFGGRKQDKRLRYPLSGHV*EMCSTI Trigger: TATAGTAGAGCACATTTCTCAAACATGCCCTGAAAG...TGGGTACCTCAGTCTCTTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CCA 90 bp | TTTTCAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCAGCCTCCCGAGTAGCTaGGACTACAAGTACCCACCA | + |
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Preference number: 4 (lower is better) Translates to: FSKWKGGYQRDGFRSSVTSLPSS*DYKYPP Trigger: TGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCT...GGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTGCAACTTCACAATGGTaGATTTGGGGGAAGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: LSFHDASAEPFKATHTKPATSQW*IWGKET Trigger: TGTTTCCTTCCCCCAAATCCACCATTGTGAAGTTGC...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CCA 90 bp | CAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCATTAAAGGCGGCAGGGGGTTaGCAACTTCACAATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QNGKEVIRETDSDHQLPLKAAGG*QLHNGG Trigger: TCCACCATTGTGAAGTTGCCAACCCCCTGCCGCCTT...TAATGGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTAAATGGCACAGTCTCTaGGGACACGTTTCACATTTT | + |
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Preference number: 4 (lower is better) Translates to: LSFHDASAEPFKATHTKPKWHSL*GHVSHF Trigger: AAAATGTGAAACGTGTCCTCAGAGACTGTGCCATTT...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | CAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCATTAAACAGGACAAGAGACTaGGGTACCCAGACCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: QNGKEVIRETDSDHQLPLNRTRD*GTQTLI Trigger: GATGAGGGTCTGGGTACCTCAGTCTCTTGTCCTGTT...TAATGGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR GCA 90 bp | TTTTCAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCCCCAGACCCTCATCCTaGCAACAGCATTCACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FSKWKGGYQRDGFRSSVTPRPSS*QQHSRS Trigger: ACTACGTGAATGCTGTTGGCAGGATGAGGGTCTGGG...GGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CCA 90 bp | ATTTGTCTTTTCTCCTCTCTATCTGGAATGTTCTCCATCCCCATCACCACCTTCCAATTATTCCAGCCTTaGTGGCCCAATAATCATGCC | + |
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Preference number: 4 (lower is better) Translates to: ICLFSSLSGMFSIPITTFQLFQP*WPNNHA Trigger: GGCATGATTATTGGGCCACCAAGGCTGGAATAATTG...GAAGGTGGTGATGGGGATGGAGAACATTCCAGATAGAGAGGAGAAAAGACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520595.2 |
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| CDS-3UTR TCA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACCTGGGATTAGCGGCATaGGCCACCACATGGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: KSSAFRSIPAINDTMILHLGLAA*ATTWPI Trigger: TATTGGCCATGTGGTGGCTCATGCCGCTAATCCCAG...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CCA 90 bp | ATTTGTCTTTTCTCCTCTCTATCTGGAATGTTCTCCATCCCCATCACCACCTTCTTTCTCCTCTCTATCTaGAATGTTCTCCATCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ICLFSSLSGMFSIPITTFFLLSI*NVLHPH Trigger: ATGGGGATGGAGAACATTCCAGATAGAGAGGAGAAA...GAAGGTGGTGATGGGGATGGAGAACATTCCAGATAGAGAGGAGAAAAGACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000520595.2 |
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| CDS-3UTR GCA 90 bp | CAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCATTACAGGCTACAGTTCCCTaGTGTCTTTCCATGATGCAT | + |
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Preference number: 4 (lower is better) Translates to: QNGKEVIRETDSDHQLPLQATVP*CLSMMH Trigger: ATGCATCATGGAAAGACAGCAGGGAACTGTAGCCTG...TAATGGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | CAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCATTACTCACGTCACTTTGGTaGAAGCGGAACATAAATGAC | + |
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Preference number: 4 (lower is better) Translates to: QNGKEVIRETDSDHQLPLLTSLW*KRNIND Trigger: GTCATTTATGTTCCGCTTTCACCAAAGTGACGTGAG...TAATGGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR GCA 90 bp | TTTTCAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCACTGCAACCTCTGTCTaGCAGTTTCAAGTAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSKWKGGYQRDGFRSSVTTATSV*QFQVVL Trigger: GAGAACTACTTGAAACTGGCAGACAGAGGTTGCAGT...GGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACTTTGAAGTGAAACAGTaGCCTAAAGCCTCACGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KSSAFRSIPAINDTMILHFEVKQ*PKASRH Trigger: GTGACGTGAGGCTTTAGGTCACTGTTTCACTTCAAA...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CCA 90 bp | AAAAGCTACAATAATTCCAATTTTTGCTTCCCTGGCAAGGTACTGTACATATACTTGGCAACTTCACAATaGTGGATTTGGGGGAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: KSYNNSNFCFPGKVLYIYLATSQ*WIWGKE Trigger: TTCCTTCCCCCAAATCCACCATTGTGAAGTTGCCAA...GTATATGTACAGTACCTTGCCAGGGAAGCAAAAATTGGAATTATTGTAGCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR TCA 90 bp | TTTTCAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCAATTTTCCCAAACCTTaGGGAGTTGAATTTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSKWKGGYQRDGFRSSVTNFPKP*GVEFCV Trigger: CACACAAAATTCAACTCCTCAAGGTTTGGGAAAATT...GGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR GCA 90 bp | CAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCATTAGGAAAATTCCTGAAATaGCTCCAAAATCCTATTATG | + |
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Preference number: 4 (lower is better) Translates to: QNGKEVIRETDSDHQLPLGKFLK*LQNPIM Trigger: CATAATAGGATTTTGGAGGCATTTCAGGAATTTTCC...TAATGGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR GCA 90 bp | AAAAGCTACAATAATTCCAATTTTTGCTTCCCTGGCAAGGTACTGTACATATACCAGTGTGTCTTAGATTaGCAAGTACATCTTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: KSYNNSNFCFPGKVLYIYQCVLD*QVHLDC Trigger: ACAATCAAGATGTACTTGGCAATCTAAGACACACTG...GTATATGTACAGTACCTTGCCAGGGAAGCAAAAATTGGAATTATTGTAGCTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS TCA 90 bp | CGGGCAACAAGCCTATCCCTTCACCAGCTGATGCAACCACATGAGTaGCTCTGTGGAGACCGCCATCTTCTCCTGCAGCCCGACGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RATSLSLHQLMQPHE*LCGDRHLLLQPDAA Trigger: GGCTGCGTCGGGCTGCAGGAGAAGATGGCGGTCTCCACAGAGTCACTCATGTGGTTGCATCAGCTGGTGAAGGGATAGGCTTGTTGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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| CDS TCA 90 bp | GTCCCGGGCAACAAGCCTATCCCTTCACCAGCTGATGCAACCACATaGGTGACTCTGTGGAGACCGCCATCTTCTCCTGCAGCCCGACGC | + |
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Preference number: 5 (lower is better) Translates to: VPGNKPIPSPADATT*VTLWRPPSSPAARR Trigger: GCGTCGGGCTGCAGGAGAAGATGGCGGTCTCCACAGAGTCACTCATGTGGTTGCATCAGCTGGTGAAGGGATAGGCTTGTTGCCCGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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| CDS TCA 90 bp | GGGGGAGCAAGGCGTCCCGGGCAACAAGCCTATCCCTTCACCAGCTaGTGCAACCACATGAGTGACTCTGTGGAGACCGCCATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGARRPGQQAYPFTS*CNHMSDSVETAIFS Trigger: GGAGAAGATGGCGGTCTCCACAGAGTCACTCATGTGGTTGCATCAGCTGGTGAAGGGATAGGCTTGTTGCCCGGGACGCCTTGCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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| CDS TCA 90 bp | CAACCATCATGTAAGAATTCTGAACACCCTGACACCACCGGGATGTaGGGAAGTCCTAACTGGCCACCTGGAGAGGCTGCAGGGAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: QPSCKNSEHPDTTGM*GSPNWPPGEAAGRG Trigger: CCCCCTCCCTGCAGCCTCTCCAGGTGGCCAGTTAGGACTTCCTCACATCCCGGTGGTGTCAGGGTGTTCAGAATTCTTACATGATGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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| CDS-3UTR CAA 90 bp | CTTCACAATGGTGGATTTGGGGGAAGGAAACAGGACAAGAGACTGAGGTACCCACAGGGTTTCATCATGTaGGCCAGGCTGGTCTCAAGC | + |
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Preference number: 5 (lower is better) Translates to: LHNGGFGGRKQDKRLRYPQGFIM*ARLVSS Trigger: GCTTGAGACCAGCCTGGCCAACATGATGAAACCCTG...TGGGTACCTCAGTCTCTTGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CAA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTGAAGGCGGCAGGGGGTaGGCAACTTCACAATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LSFHDASAEPFKATHTKPEGGRG*ATSQWW Trigger: CCACCATTGTGAAGTTGCCAACCCCCTGCCGCCTTC...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CAA 90 bp | CTGTCTTTCCATGATGCATCAGCAGAACCATTCAAAGCCACACACACCAAACCTAGAGTTGATACAGTTTaGATGGCAGGCTACAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSFHDASAEPFKATHTKPRVDTV*MAGYSS Trigger: GGAACTGTAGCCTGCCATCAAAACTGTATCAACTCT...AGGTTTGGTGTGTGTGGCTTTGAATGGTTCTGCTGATGCATCATGGAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACTCTGACAACATGTACTaGGCAGGGGAAGGCGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KSSAFRSIPAINDTMILHSDNMY*AGEGGR Trigger: CCTGCCGCCTTCCCCTGCCAAGTACATGTTGTCAGA...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CAA 90 bp | TTTTCAAAATGGAAAGGAGGTTATCAGAGAGACGGATTCAGATCATCAGTTACCTTCACAATGGTGGATTaGGGGGAAGGAAACAGGACA | + |
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Preference number: 5 (lower is better) Translates to: FSKWKGGYQRDGFRSSVTFTMVD*GEGNRT Trigger: TGTCCTGTTTCCTTCCCCCAAATCCACCATTGTGAA...GGTAACTGATGATCTGAATCCGTCTCTCTGATAACCTCCTTTCCATTTTGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCAGTGCTTTTCGATCCATCCCAGCAATAAATGATACTATGATATTACACCCTTTCAGGGCATGTTaGAGAAATGTGCTCTACTAT | + |
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Preference number: 5 (lower is better) Translates to: KSSAFRSIPAINDTMILHPFRAC*RNVLYY Trigger: ATAGTAGAGCACATTTCTCAAACATGCCCTGAAAGG...GTGTAATATCATAGTATCATTTATTGCTGGGATGGATCGAAAAGCACTGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS-3UTR CAA 90 bp | AAAAGCTACAATAATTCCAATTTTTGCTTCCCTGGCAAGGTACTGTACATATACATTGCCAAGTACATCTaGATTGTGACATGCAAAATG | + |
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Preference number: 5 (lower is better) Translates to: KSYNNSNFCFPGKVLYIYIAKYI*IVTCKM Trigger: CATTTTGCATGTCACAATCAAGATGTACTTGGCAAT...GTATATGTACAGTACCTTGCCAGGGAAGCAAAAATTGGAATTATTGTAGCTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000523111.7 |
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| CDS TCA 72 bp | AGCCTATCCCTTCACCAGCTGATGCAACCACATGAGTaGCTCTGTGGAGACCGCCATCTTCTCCTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SLSLHQLMQPHE*LCGDRHLLLQP Trigger: GGGCTGCAGGAGAAGATGGCGGTCTCCACAGAGTCACTCATGTGGTTGCATCAGCTGGTGAAGGGATAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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| CDS TCA 72 bp | AACAAGCCTATCCCTTCACCAGCTGATGCAACCACATaGGTGACTCTGTGGAGACCGCCATCTTCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: NKPIPSPADATT*VTLWRPPSSPA Trigger: TGCAGGAGAAGATGGCGGTCTCCACAGAGTCACTCATGTGGTTGCATCAGCTGGTGAAGGGATAGGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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| CDS GCA 72 bp | GGAACTTTAACTCCTTGTAAGAGGAATGCTAACTTCTaGTTTCGTTCTTTTGGAAGCCAACCATCATGTAAG | + |
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Preference number: 6 (lower is better) Translates to: GTLTPCKRNANF*FRSFGSQPSCK Trigger: CTTACATGATGGTTGGCTTCCAAAAGAACGAAAGCAGAAGTTAGCATTCCTCTTACAAGGAGTTAAAGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521346.5 |
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