RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2Q1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160714

Ensembl transcript IDs: ENST00000292211.5, ENST00000467683.5, ENST00000474181.1, ENST00000476612.1, ENST00000483639.1, ENST00000491572.1, ENST00000497453.1

Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTaGTCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGACCAGGTGTG +
Preference number: 1 (lower is better)
Translates to: SLAGQALHSKGASAG*SRGLEEKSRGRPGV
Trigger: CACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 90 bp CCAGGAGAGGAACCAATGAACAGCGAAGAGTTGCAGCCACACAGCTaGGATCAGAAAAGACCACATACACACTTGGAGACTGTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: PGEEPMNSEELQPHS*DQKRPHTHLETVSP
Trigger: TGGGGACACAGTCTCCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGCTGTTCATTGGTTCCTCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 90 bp GGTCCTAAGAGGCTGAGTCCCAGAGCAAGCTTACAGACAAAGAGATaGAGGCAGCACCCGCTAGATGCAAAGTCATGCCCAAACTTTTAC +
Preference number: 1 (lower is better)
Translates to: GPKRLSPRASLQTKR*RQHPLDAKSCPNFY
Trigger: GTAAAAGTTTGGGCATGACTTTGCATCTAGCGGGTGCTGCCTGCATCTCTTTGTCTGTAAGCTTGCTCTGGGACTCAGCCTCTTAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR CCA 90 bp GTCCTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTaGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCT +
Preference number: 1 (lower is better)
Translates to: VLRINTIVSAYHIVV*QARLCIPRGQVLVA
Trigger: AGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 90 bp CCATCATTGTCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATaGGGGAGGGAACCACAGAGGCAGCGTGAGATCCAAATACAGCAT +
Preference number: 1 (lower is better)
Translates to: PSLSCNRQSYHVQEK*GREPQRQREIQIQH
Trigger: ATGCTGTATTTGGATCTCACGCTGCCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 90 bp ACCATCCAGTGCTGGTTAGAAGCCACTTTCCAGGAGAGGAACCAATaGACAGCGAAGAGTTGCAGCCACACAGCTGAGATCAGAAAAGAC +
Preference number: 1 (lower is better)
Translates to: TIQCWLEATFQERNQ*TAKSCSHTAEIRKD
Trigger: GTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGCTGTTCATTGGTTCCTCTCCTGGAAAGTGGCTTCTAACCAGCACTGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 90 bp AATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCAAGTTTCTCTTaGTTTAGCAGCAAAATGCGGCCTCTCATCTCTACCAAAGCAACA +
Preference number: 1 (lower is better)
Translates to: NLGADQVCASAPSFS*FSSKMRPLISTKAT
Trigger: TGTTGCTTTGGTAGAGATGAGAGGCCGCATTTTGCTGCTAAAGCAAGAGAAACTTGGAGCTGAAGCACACACCTGGTCTGCCCCTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 90 bp GTCATGCCCAAACTTTTACAACAGCAAGTACATACAACACAGCACTaGCAGTTCCATCTCAGTACAGACTCCCCACCTCATCTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: VMPKLLQQQVHTTQH*QFHLSTDSPPHLPS
Trigger: GGAGGGAAGATGAGGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGCTGTTGTAAAAGTTTGGGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 90 bp CAGAGCAAGCTTACAGACAAAGAGATGCAGGCAGCACCCGCTAGATaGAAAGTCATGCCCAAACTTTTACAACAGCAAGTACATACAACA +
Preference number: 1 (lower is better)
Translates to: QSKLTDKEMQAAPAR*KVMPKLLQQQVHTT
Trigger: TGTTGTATGTACTTGCTGTTGTAAAAGTTTGGGCATGACTTTGCATCTAGCGGGTGCTGCCTGCATCTCTTTGTCTGTAAGCTTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR CAA 90 bp AGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGCCTaGAGGAGAAATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: RLCIPRGQVLVAPEA*RRNLGADQVCASAP
Trigger: TGGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp TCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCAGTCTGGAGCACAGCTaGGTTTCCAGCAATATAAGG +
Preference number: 2 (lower is better)
Translates to: SRGLEEKSRGRPGVCFSSSLEHS*VSSNIR
Trigger: CCTTATATTGCTGGAAACTCAGCTGTGCTCCAGACT...GGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR GCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAAGGGGCAAGTGCTGGTTaGTCCAGAGGCCTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQGASAG*SRGLEE
Trigger: CTCCTCAAGGCCTCTGGAGCAACCAGCACTTGCCCC...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR GCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAATTCCAAGGGGGCAAGTaGTGGTTGCTCCAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQFQGGK*WLLQRP
Trigger: AGGCCTCTGGAGCAACCAGCACTTGCCCCCTTGGAA...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCCTACCAAAGCAACAGTaGACTCGTACCCCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTLPKQQ*TRTPPH
Trigger: GTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAG...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CCA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCATTCCAGCAAGGTGGTTaGTTGGTCTGTAAGTCAGTC +
Preference number: 2 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSFQQGG*LVCKSV
Trigger: GACTGACTTACAGACCAACCAACCACCTTGCTGGAA...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCGACCACATACACACTTaGAGACTGTGTCCCCATCCC +
Preference number: 2 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTDHIHT*RLCPHP
Trigger: GGGATGGGGACACAGTCTCCAAGTGTGTATGTGGTC...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp CAGCATGTTTTATTAGCACCCCTAATTAGGTGGGTGTGGGTAGAGTTAGAGCAGCACGTCCAGGAAAAATaGGGGAGGGAACCACAGAGG +
Preference number: 2 (lower is better)
Translates to: QHVLLAPLIRWVWVELEQHVQEK*GREPQR
Trigger: CCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTG...CTGCTCTAACTCTACCCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGTTGCAGCCACACAGCTaGGATCAGAAAAGACCACAT +
Preference number: 2 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWLQPHS*DQKRPH
Trigger: ATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAA...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR GCA 90 bp CAATCTACATTCCAGCCAGGGCTGGTGGTAAGTTCAGAAGAAAGCCACAGAGGCTTACAGACAAAGAGATaGAGGCAGCACCCGCTAGAT +
Preference number: 2 (lower is better)
Translates to: QSTFQPGLVVSSEESHRGLQTKR*RQHPLD
Trigger: ATCTAGCGGGTGCTGCCTGCATCTCTTTGTCTGTAA...GCCTCTGTGGCTTTCTTCTGAACTTACCACCAGCCCTGGCTGGAATGTAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCAAGGAGGCTCTAGTCTaGAGCACAGCTGAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTKEALV*STAEFP
Trigger: TGGAAACTCAGCTGTGCTCCAGACTAGAGCCTCCTT...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CCA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGTACCACATTGTAGTTTaGCAGGCCAGGCTCTGCATT +
Preference number: 2 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWYHIVV*QARLCI
Trigger: AATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTA...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp CTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTGGCAGGCCAGGACCACAGAGGCAGCGTaGGATCCAAATACAGCATTC +
Preference number: 2 (lower is better)
Translates to: LRINTIVSAYHIVVWQARTTEAA*DPNTAF
Trigger: GAATGCTGTATTTGGATCTCACGCTGCCTCTGTGGT...CCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR GCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCGCTCCAAGTTTCTCTTaGTTTAGCAGCAAAATGCGG +
Preference number: 2 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTAPSFS*FSSKMR
Trigger: CCGCATTTTGCTGCTAAAGCAAGAGAAACTTGGAGC...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp ACACAGCTGAGATCAGAAAAGACCACATACACACTTGGAGACTGTGTCCCCATCTCAGTCTTGAGTACTTaGAACAGTTCTGTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: TQLRSEKTTYTLGDCVPISVLST*NSSVFV
Trigger: AACAAACACAGAACTGTTTCAAGTACTCAAGACTGA...GATGGGGACACAGTCTCCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCAGCAAAGCTTACCAATaGTCACCATCCAGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLSKAYQ*SPSSAG
Trigger: ACCAGCACTGGATGGTGATCATTGGTAAGCTTTGCT...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCATTGAGTGGGACTGGTaGACTCTCCATCCACCTAAA +
Preference number: 2 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLIEWDW*TLHPPK
Trigger: TTTAGGTGGATGGAGAGTCCACCAGTCCCACTCAAT...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCCATACAACACAGCACTaGCAGTTCCATCTCAGTACA +
Preference number: 2 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLHTTQH*QFHLST
Trigger: TGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATG...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 72 bp GGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTaGTCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: GQALHSKGASAG*SRGLEEKSRGR
Trigger: TCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 72 bp TCAGCCTACCACATTGTAGTTTGGCAGGCCAGGCTCTaGATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: SAYHIVVWQARL*IPRGQVLVAPE
Trigger: CTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTAGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 72 bp AGGCTGAGTCCCAGAGCAAGCTTACAGACAAAGAGATaGAGGCAGCACCCGCTAGATGCAAAGTCATGCCCA +
Preference number: 3 (lower is better)
Translates to: RLSPRASLQTKR*RQHPLDAKSCP
Trigger: TGGGCATGACTTTGCATCTAGCGGGTGCTGCCTGCATCTCTTTGTCTGTAAGCTTGCTCTGGGACTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 72 bp TCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATaGGGGAGGGAACCACAGAGGCAGCGTGAGATCCAA +
Preference number: 3 (lower is better)
Translates to: SCNRQSYHVQEK*GREPQRQREIQ
Trigger: TTGGATCTCACGCTGCCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 72 bp GCAGACCAGGTGTGTGCTTCAGCTCCAAGTTTCTCTTaGTTTAGCAGCAAAATGCGGCCTCTCATCTCTACC +
Preference number: 3 (lower is better)
Translates to: ADQVCASAPSFS*FSSKMRPLIST
Trigger: GGTAGAGATGAGAGGCCGCATTTTGCTGCTAAAGCAAGAGAAACTTGGAGCTGAAGCACACACCTGGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR CCA 72 bp ATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTaGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: INTIVSAYHIVV*QARLCIPRGQV
Trigger: CACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR CCA 72 bp CCAGGCAGTTGTCCCAAGTCTGGGTTTTCTGAGACTTaGGTCTTCACTTGGCCATCTTTGGCCTCTGTCATT +
Preference number: 3 (lower is better)
Translates to: PGSCPKSGFSET*VFTWPSLASVI
Trigger: AATGACAGAGGCCAAAGATGGCCAAGTGAAGACCCAAGTCTCAGAAAACCCAGACTTGGGACAACTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CAA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCCAGCAAGGTGGTTGGTaGGTCTGTAAGTCAGTCTTG +
Preference number: 3 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTQQGGW*VCKSVL
Trigger: CAAGACTGACTTACAGACCAACCAACCACCTTGCTG...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CAA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAACTACCACATTGTAGTTaGGCAGGCCAGGCTCTGCAT +
Preference number: 3 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQLPHCS*AGQALH
Trigger: ATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTAG...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CAA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGTTCACTTGGCCATCTTaGGCCTCTGTCATTTCACTG +
Preference number: 3 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWFTWPS*ASVISL
Trigger: CAGTGAAATGACAGAGGCCAAAGATGGCCAAGTGAA...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR GCA 72 bp GGAGGTGAGCAAAGCTTACCAATGATCACCATCCAGTaGTGGTTAGAAGCCACTTTCCAGGAGAGGAACCAA +
Preference number: 3 (lower is better)
Translates to: GGEQSLPMITIQ*WLEATFQERNQ
Trigger: TTGGTTCCTCTCCTGGAAAGTGGCTTCTAACCAGCACTGGATGGTGATCATTGGTAAGCTTTGCTCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CAA 90 bp CATCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTGTCAGTCTTGAGTACTaGAAACAGTTCTGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: HLYQSNSGLVPLPTSQVVVSLEY*KQFCVC
Trigger: ACAAACACAGAACTGTTTCAAGTACTCAAGACTGAC...AACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR-3UTR CAA 90 bp GGGGAAAGAATGGCCAATGTGAAAATTGCTGTGTCTCAAAGCATTACAGAACTGGACTTGGGTCTTCACTaGGCCATCTTTGGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: GERMANVKIAVSQSITELDLGLH*AIFGLC
Trigger: ACAGAGGCCAAAGATGGCCAAGTGAAGACCCAAGTC...CAGTTCTGTAATGCTTTGAGACACAGCAATTTTCACATTGGCCATTCTTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 72 bp GAACCAATGAACAGCGAAGAGTTGCAGCCACACAGCTaGGATCAGAAAAGACCACATACACACTTGGAGACT +
Preference number: 3 (lower is better)
Translates to: EPMNSEELQPHS*DQKRPHTHLET
Trigger: AGTCTCCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGCTGTTCATTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
3UTR TCA 72 bp AAACTTTTACAACAGCAAGTACATACAACACAGCACTaGCAGTTCCATCTCAGTACAGACTCCCCACCTCAT +
Preference number: 3 (lower is better)
Translates to: KLLQQQVHTTQH*QFHLSTDSPPH
Trigger: ATGAGGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGCTGTTGTAAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGAGCCGGTCAGTGGCCTaGACCGAGCCAGACACTGCA +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRSRSVA*TEPDTA
Trigger: TGCAGTGTCTGGCTCGGTGCAGGCCACTGACCGGCT...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGTTCCAAGGGGGCAAGTaGTGGTTGCTCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRFQGGK*WLLQRP
Trigger: AGGCCTCTGGAGCAACCAGCACTTGCCCCCTTGGAA...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCAGGCACCGACCCCCGTaGGGGGAGATGCGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTRHRPP*GEMRSG
Trigger: CCCGGACCGCATCTCCCCCCACGGGGGTCGGTGCCT...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CATCATTGTCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATGAGGGAGGGCCCTGCGGCTGCGGCTaGTGCATCCTCCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: HHCPAIGRAITSRKNEGGPCGCG*CILRSA
Trigger: AGCGGAGCGGAGGATGCAGCAGCCGCAGCCGCAGGG...CCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGTCTGCTGGCAAGGGTTaGTCCAGCATCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRSAGKG*SSISTS
Trigger: AGATGTGGAGATGCTGGATCAACCCTTGCCAGCAGA...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAATGCGGCTGCGGCTGCTaGATCCTCCGCTCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQCGCGC*ILRSAP
Trigger: CGGAGCGGAGCGGAGGATGCAGCAGCCGCAGCCGCA...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGTGTGCACTGCTCTGCTaGCAAGGGTTGATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRCALLC*QGLIQH
Trigger: ATGCTGGATCAACCCTTGCCAGCAGAGCAGTGCACA...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTGGCAGGCCAGGGGCAGGCGCTGGCAATaGGGAAGCGCTCGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LRINTIVSAYHIVVWQARGRRWQ*GSARGR
Trigger: GCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCC...CCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGATCTGGAGATCGTTGTaGAAAGCGCTGTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRIWRSL*KALSWS
Trigger: TGACCAGGACAGCGCTTTGCACAACGATCTCCAGAT...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GCGAAGAGTTGCAGCCACACAGCTGAGATCAGAAAAGACCACATACACACTTGGCGTCCAGGCAGGCGCTaGCAATGCGGAAGCGCTCGT +
Preference number: 4 (lower is better)
Translates to: AKSCSHTAEIRKDHIHTWRPGRR*QCGSAR
Trigger: ACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACG...CCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAACGCTCGTGGCCGCGGTaGAAGATGGACTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQRSWPR*KMDSSS
Trigger: GCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCG...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp CAATCTACATTCCAGCCAGGGCTGGTGGTAAGTTCAGAAGAAAGCCACAGAGGCTCATCAGCCGGTCAGTaGCCTGCACCGAGCCAGACA +
Preference number: 4 (lower is better)
Translates to: QSTFQPGLVVSSEESHRGSSAGQ*PAPSQT
Trigger: TGTCTGGCTCGGTGCAGGCCACTGACCGGCTGATGA...GCCTCTGTGGCTTTCTTCTGAACTTACCACCAGCCCTGGCTGGAATGTAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGGGGTTTTCTGAGACTTaGGTCTTCACTTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRGFSET*VFTWPS
Trigger: AGATGGCCAAGTGAAGACCCAAGTCTCAGAAAACCC...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGCTCCTTCTTTCTCTTTaGGGATCTGGAGATCGTTGT +
Preference number: 4 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRLLLSL*GSGDRC
Trigger: ACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAG...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCACACGTCCAGGAAAAATaGGGGAGGGAACCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSHVQEK*GREPQR
Trigger: CCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTG...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCGGGGCAAGTGCTGGTTaGTCCAGAGGCCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTGASAG*SRGLEE
Trigger: CTCCTCAAGGCCTCTGGAGCAACCAGCACTTGCCCC...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GCGAAGAGTTGCAGCCACACAGCTGAGATCAGAAAAGACCACATACACACTTGGTGGCAGGCCAGGCTCTaGATTCCAAGGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: AKSCSHTAEIRKDHIHTWWQARL*IPRGQV
Trigger: CACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCA...CCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp ACACAGCTGAGATCAGAAAAGACCACATACACACTTGGAGACTGTGTCCCCATCGGGAGGGAGGAAGGGTaGTACTCCAGGGTTAGCCGT +
Preference number: 4 (lower is better)
Translates to: TQLRSEKTTYTLGDCVPIGREEG*YSRVSR
Trigger: ACGGCTAACCCTGGAGTATCACCCTTCCTCCCTCCC...GATGGGGACACAGTCTCCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCTTGCAGCCACACAGCTaGGATCAGAAAAGACCACAT +
Preference number: 4 (lower is better)
Translates to: SRGLEEKSRGRPGVCFSSLQPHS*DQKRPH
Trigger: ATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAA...GGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp CAGCATGTTTTATTAGCACCCCTAATTAGGTGGGTGTGGGTAGAGTTAGAGCAGATGCGGAAGCGCTCGTaGCCGCGGTGGAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: QHVLLAPLIRWVWVELEQMRKRS*PRWKMD
Trigger: GTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCAT...CTGCTCTAACTCTACCCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCAGACCACATACACACTTaGAGACTGTGTCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSDHIHT*RLCPHP
Trigger: GGGATGGGGACACAGTCTCCAAGTGTGTATGTGGTC...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp TCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCCACAACCCTGACAAATaGTGGGTCAAAGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SRGLEEKSRGRPGVCFSSHNPDK*WVKGKV
Trigger: AACTTTCCCTTTGACCCACCATTTGTCAGGGTTGTG...GGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCGAAGTTCCATGCAGATaGCCCCTCCGCCCAGAACAT +
Preference number: 4 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTEVPCR*PLRPEH
Trigger: ATGTTCTGGGCGGAGGGGCCATCTGCATGGAACTTC...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp CATCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTGCACCCCTAATTAGGTaGGTGTGGGTAGAGTTAGAG +
Preference number: 4 (lower is better)
Translates to: HLYQSNSGLVPLPTSQVVAPLIR*VWVELE
Trigger: CTCTAACTCTACCCACACCCACCTAATTAGGGGTGC...AACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCAAGTCTGGAGCACAGCTaGGTTTCCAGCAATATAAGG +
Preference number: 4 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSSLEHS*VSSNIR
Trigger: CCTTATATTGCTGGAAACTCAGCTGTGCTCCAGACT...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAACTGTGTGCACTGCTCTaGTGGCAAGGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQLCALL*WQGLIQ
Trigger: CTGGATCAACCCTTGCCAGCAGAGCAGTGCACACAG...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCACAGCATCTCCACATCTaGATGCTGAGGGAGGTTATA +
Preference number: 4 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSQHLHI*MLREVI
Trigger: TATAACCTCCCTCAGCATCCAGATGTGGAGATGCTG...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GCGAAGAGTTGCAGCCACACAGCTGAGATCAGAAAAGACCACATACACACTTGGAGCATTGAGTGGGACTaGTGGACTCTCCATCCACCT +
Preference number: 4 (lower is better)
Translates to: AKSCSHTAEIRKDHIHTWSIEWD*WTLHPP
Trigger: AGGTGGATGGAGAGTCCACCAGTCCCACTCAATGCT...CCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GCGAAGAGTTGCAGCCACACAGCTGAGATCAGAAAAGACCACATACACACTTGGTCCAAACTGCACTCGTaGTTTCCCCTTCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: AKSCSHTAEIRKDHIHTWSKLHS*FPLHQC
Trigger: ACACTGGTGAAGGGGAAAGCACGAGTGCAGTTTGGA...CCAAGTGTGTATGTGGTCTTTTCTGATCTCAGCTGTGTGGCTGCAACTCTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GAGATCCAAATACAGCATTCAAAGGTAATTGGTCCAGTGGTGCCTGGGGAGGGAGTAGGACCCACCTTGTaGGAGTGGCTTGAAAGAATC +
Preference number: 4 (lower is better)
Translates to: EIQIQHSKVIGPVVPGEGVGPTL*EWLERI
Trigger: GATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC...TCCCTCCCCAGGCACCACTGGACCAATTACCTTTGAATGCTGTATTTGGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCACTAATTAGGTGGGTGTaGGTAGAGTTAGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSLIRWV*VELEQH
Trigger: ATGCTGCTCTAACTCTACCCACACCCACCTAATTAG...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAATACACAGGTCGGAGATaGTCCTCTTCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQYTGRR*SSSDAA
Trigger: TGCAGCATCTGAAGAGGATCATCTCCGACCTGTGTA...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp GAGATCCAAATACAGCATTCAAAGGTAATTGGTCCAGTGGTGCCTGGGGAGGGACAAGAGAGAGGGAGGTaGGCAAAGCTTACCAATGAT +
Preference number: 4 (lower is better)
Translates to: EIQIQHSKVIGPVVPGEGQERGR*AKLTND
Trigger: ATCATTGGTAAGCTTTGCTCACCTCCCTCTCTCTTG...TCCCTCCCCAGGCACCACTGGACCAATTACCTTTGAATGCTGTATTTGGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp CATCATTGTCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATGAGGGAGGGAAGCCACAGAGGCCTTaGAAACCAGATTTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HHCPAIGRAITSRKNEGGKPQRP*KPDFSS
Trigger: AGAGCTGAAATCTGGTTTTCAAGGCCTCTGTGGCTT...CCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAATTGTTGGCTCCAAACTaGACTCGTGCTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQLLAPN*TRAFPF
Trigger: GAAGGGGAAAGCACGAGTGCAGTTTGGAGCCAACAA...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTGGCAGGCCAGGGGCAGACCAGGTGTGTaGTTCAGCTCCAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LRINTIVSAYHIVVWQARGRPGV*FSSKFL
Trigger: GAGAAACTTGGAGCTGAAGCACACACCTGGTCTGCC...CCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp ATAAGAATGCCTGCTAGCAAGGGTTCCAGCAAGGTGGTTGGTTGGTCTGTAAGTAAGGAGGCTCTAGTCTaGAGCACAGCTGAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IRMPASKGSSKVVGWSVSKEALV*STAEFP
Trigger: TGGAAACTCAGCTGTGCTCCAGACTAGAGCCTCCTT...ACTTACAGACCAACCAACCACCTTGCTGGAACCCTTGCTAGCAGGCATTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCTACCACATTGTAGTTTaGCAGGCCAGGCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTYHIVV*QARLCI
Trigger: AATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTA...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp CAATCTACATTCCAGCCAGGGCTGGTGGTAAGTTCAGAAGAAAGCCACAGAGGCTACGAAGCAGCCTCTTaGGCCTCATTTTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: QSTFQPGLVVSSEESHRGYEAAS*ASFSFS
Trigger: AGAAAAAGAAAATGAGGCTCAAGAGGCTGCTTCGTA...GCCTCTGTGGCTTTCTTCTGAACTTACCACCAGCCCTGGCTGGAATGTAGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp GAGATCCAAATACAGCATTCAAAGGTAATTGGTCCAGTGGTGCCTGGGGAGGGACATACAACACAGCACTaGCAGTTCCATCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: EIQIQHSKVIGPVVPGEGHTTQH*QFHLST
Trigger: TGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATG...TCCCTCCCCAGGCACCACTGGACCAATTACCTTTGAATGCTGTATTTGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGTTCAGCTCTATGGAATaGATTTTCCCCTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWFSSME*IFPLCP
Trigger: GGGACATAAGGGGAAAATTCATTCCATAGAGCTGAA...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CATCATTGTCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATGAGGGAGGGAGTGTGGCACTGATCTaGATGATCACTGACTCTATG +
Preference number: 4 (lower is better)
Translates to: HHCPAIGRAITSRKNEGGSVALI*MITDSM
Trigger: CATAGAGTCAGTGATCATGCAGATCAGTGCCACACT...CCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GGGGAAAGAATGGCCAATGTGAAAATTGCTGTGTCTCAAAGCATTACAGAACTGTCCGTGATGTTGCAGTaGATGCGGACAGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: GERMANVKIAVSQSITELSVMLQ*MRTGSP
Trigger: TGGGGATCCTGTCCGCATCCACTGCAACATCACGGA...CAGTTCTGTAATGCTTTGAGACACAGCAATTTTCACATTGGCCATTCTTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp ATAAGAATGCCTGCTAGCAAGGGTTCCAGCAAGGTGGTTGGTTGGTCTGTAAGTATCACCATCCAGTGCTaGTTAGAAGCCACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IRMPASKGSSKVVGWSVSITIQC*LEATFQ
Trigger: CTGGAAAGTGGCTTCTAACCAGCACTGGATGGTGAT...ACTTACAGACCAACCAACCACCTTGCTGGAACCCTTGCTAGCAGGCATTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAAATTGAGTGGGACTGGTaGACTCTCCATCCACCTAAA +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQIEWDW*TLHPPK
Trigger: TTTAGGTGGATGGAGAGTCCACCAGTCCCACTCAAT...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCCAGGGTATGACTCCGTaGTGTTGCAGTGGATGCGGA +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLQGMTP*CCSGCG
Trigger: TCCGCATCCACTGCAACATCACGGAGTCATACCCTG...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGTCTGTAAGTCAGTCTTaGGTACTTGAAACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWSVSQS*VLETVL
Trigger: CAGAACTGTTTCAAGTACTCAAGACTGACTTACAGA...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp CAGCATGTTTTATTAGCACCCCTAATTAGGTGGGTGTGGGTAGAGTTAGAGCAGAGCAAAGCTTACCAATaGTCACCATCCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QHVLLAPLIRWVWVELEQSKAYQ*SPSSAG
Trigger: ACCAGCACTGGATGGTGATCATTGGTAAGCTTTGCT...CTGCTCTAACTCTACCCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp CAGCATGTTTTATTAGCACCCCTAATTAGGTGGGTGTGGGTAGAGTTAGAGCAGCAAGTCTGGGTTTTCTaGGACTTGGGTCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: QHVLLAPLIRWVWVELEQQVWVF*DLGLHL
Trigger: CAAGTGAAGACCCAAGTCTCAGAAAACCCAGACTTG...CTGCTCTAACTCTACCCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCATCCTCTTCAGATGCTaGAATAGCAGAGTATTCCCT +
Preference number: 4 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTILFRC*NSRVFP
Trigger: AGGGAATACTCTGCTATTGCAGCATCTGAAGAGGAT...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GCAAGTACATACAACACAGCACTGACAGTTCCATCTCAGTACAGACTCCCCACCATTCACGAGTTCGACTaGATAGTTTCCGCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: ASTYNTALTVPSQYRLPTIHEFD*IVSAFE
Trigger: TTCAAAGGCGGAAACTATGCAGTCGAACTCGTGAAT...GGTGGGGAGTCTGTACTGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAACTTGTAGGACTGCTGTaGTCTTGTCAGACTGTATTG +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQLVGLL*SCQTVL
Trigger: CAATACAGTCTGACAAGAGCACAGCAGTCCTACAAG...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp ATAAGAATGCCTGCTAGCAAGGGTTCCAGCAAGGTGGTTGGTTGGTCTGTAAGTATGATCACCATCCAGTaGTGGTTAGAAGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: IRMPASKGSSKVVGWSVSMITIQ*WLEATF
Trigger: GAAAGTGGCTTCTAACCAGCACTGGATGGTGATCAT...ACTTACAGACCAACCAACCACCTTGCTGGAACCCTTGCTAGCAGGCATTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAATTCTCTTTGAGGATCTaGAGATCGTTGTGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQFSLRI*RSLCKA
Trigger: CGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAA...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp CTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTGGCAGGCCAGGGCCTTTGAAACTCTGTaGTCGGTATATATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LRINTIVSAYHIVVWQARAFETL*SVYIPE
Trigger: CTCAGGGATATATACCGATCACAGAGTTTCAAAGGC...CCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGTCAGTCTTGAGTACTTaGAACAGTTCTGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWSVLST*NSSVFV
Trigger: AACAAACACAGAACTGTTTCAAGTACTCAAGACTGA...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCGAGTTAGAGCAGCATTaGGTGGGACTGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLELEQH*VGLVDS
Trigger: AGAGTCCACCAGTCCCACTCAATGCTGCTCTAACTC...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTGGCAGGCCAGGGCTCCAAGTTTCTCTTaGTTTAGCAGCAAAATGCGG +
Preference number: 4 (lower is better)
Translates to: LRINTIVSAYHIVVWQARAPSFS*FSSKMR
Trigger: CCGCATTTTGCTGCTAAAGCAAGAGAAACTTGGAGC...CCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp GGGGAAAGAATGGCCAATGTGAAAATTGCTGTGTCTCAAAGCATTACAGAACTGACTTGGGTCTTCACTTaGCCATCTTTGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GERMANVKIAVSQSITELTWVFT*PSLASV
Trigger: GACAGAGGCCAAAGATGGCCAAGTGAAGACCCAAGT...CAGTTCTGTAATGCTTTGAGACACAGCAATTTTCACATTGGCCATTCTTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCATCGGTATATATCCCTaGGCTCCTTCATCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLIGIYP*APSSAG
Trigger: ACCGGCTGATGAAGGAGCTCAGGGATATATACCGAT...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp ATAAGAATGCCTGCTAGCAAGGGTTCCAGCAAGGTGGTTGGTTGGTCTGTAAGTATGATCCTCTTCAGATaGTGCAATAGCAGAGTATTC +
Preference number: 4 (lower is better)
Translates to: IRMPASKGSSKVVGWSVSMILFR*CNSRVF
Trigger: GAATACTCTGCTATTGCAGCATCTGAAGAGGATCAT...ACTTACAGACCAACCAACCACCTTGCTGGAACCCTTGCTAGCAGGCATTCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCGCAGCACCCGCTAGATaGAAAGTCATGCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLAAPAR*KVMPKL
Trigger: AAGTTTGGGCATGACTTTGCATCTAGCGGGTGCTGC...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CTAAGAATTAACACCATCGTTTCAGCCTACCACATTGTAGTTTGGCAGGCCAGGAAAGCATTACAGAACTaGTCTAGCATCCTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRINTIVSAYHIVVWQARKALQN*SSILVP
Trigger: GGGAACTAGGATGCTAGAGCAGTTCTGTAATGCTTT...CCTGGCCTGCCAAACTACAATGTGGTAGGCTGAAACGATGGTGTTAATTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CCA 90 bp CAATCTACATTCCAGCCAGGGCTGGTGGTAAGTTCAGAAGAAAGCCACAGAGGCCAGATTTCAGCTCTATaGAATGAATTTTCCCCTTAT +
Preference number: 4 (lower is better)
Translates to: QSTFQPGLVVSSEESHRGQISAL*NEFSPY
Trigger: ATAAGGGGAAAATTCATTCCATAGAGCTGAAATCTG...GCCTCTGTGGCTTTCTTCTGAACTTACCACCAGCCCTGGCTGGAATGTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCGCTTTAGCAGCAAAATaGGGCCTCTCATCTCTACCA +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLALAAK*GLSSLP
Trigger: TGGTAGAGATGAGAGGCCGCATTTTGCTGCTAAAGC...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCTTACAGACAAAGAGATaGAGGCAGCACCCGCTAGAT +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLLQTKR*RQHPLD
Trigger: ATCTAGCGGGTGCTGCCTGCATCTCTTTGTCTGTAA...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR GCA 90 bp CAGCATGTTTTATTAGCACCCCTAATTAGGTGGGTGTGGGTAGAGTTAGAGCAGGGCCAATGTGAAAATTaGTGTGTCTCAAAGCATTAC +
Preference number: 4 (lower is better)
Translates to: QHVLLAPLIRWVWVELEQGQCEN*CVSKHY
Trigger: GTAATGCTTTGAGACACAGCAATTTTCACATTGGCC...CTGCTCTAACTCTACCCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCCTCATCTTCATCTTCTaGAGACACGTCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLLIFIF*RHVFLC
Trigger: ACACAGGAAGACGTGTCTTCAGAAGATGAAGATGAG...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR TCA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCCATAGTTTCCGCCTTTaGAACTCTGTGATCGGTATA +
Preference number: 4 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLHSFRL*NSVIGI
Trigger: TATACCGATCACAGAGTTTCAAAGGCGGAAACTATG...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS CCA 90 bp GGCAGGCGCTGGCAATGCGGAAGCGCTCGTGGCCGCGGTGGAAGATaGACTCGAGCAGCTTCAGCTCTCGCCTCAGGCAGGGCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: GRRWQCGSARGRGGR*TRAASALASGRAPA
Trigger: GGCCGGGGCCCTGCCTGAGGCGAGAGCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS GCA 90 bp TCAGCTCGTCCAGGCAGGCGCTCTGTGGGCGCCTCAGTGCGAGTTTaGGTATGTCGTGCGTGCTTGCGCGCGACGCCCCTTCGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: SARPGRRSVGASVRV*VCRACLRATPLRLR
Trigger: GCGCAGGCGAAGGGGCGTCGCGCGCAAGCACGCACGACATACGCAAACTCGCACTGAGGCGCCCACAGAGCGCCTGCCTGGACGAGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS CCA 90 bp TCGTCCAGGCAGGCGCTGGCAATGCGGAAGCGCTCGTGGCCGCGGTaGAAGATGGACTCGAGCAGCTTCAGCTCTCGCCTCAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SSRQALAMRKRSWPR*KMDSSSFSSRLRQG
Trigger: GCCCTGCCTGAGGCGAGAGCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS TCA 90 bp TGGCAGCAGACCACGAAACCACTGCCCACACCCGCTCCGGGACCCTaGATGAAAATGCTGGATGGGGCTGCCCTGGAGATCCCACCACAG +
Preference number: 5 (lower is better)
Translates to: WQQTTKPLPTPAPGP*MKMLDGAALEIPPQ
Trigger: CTGTGGTGGGATCTCCAGGGCAGCCCCATCCAGCATTTTCATTCAGGGTCCCGGAGCGGGTGTGGGCAGTGGTTTCGTGGTCTGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS CCA 90 bp ACCACTGCCCACACCCGCTCCGGGACCCTGAATGAAAATGCTGGATaGGGCTGCCCTGGAGATCCCACCACAGTAGCCCCACTCACACTC +
Preference number: 5 (lower is better)
Translates to: TTAHTRSGTLNENAG*GCPGDPTTVAPLTL
Trigger: GAGTGTGAGTGGGGCTACTGTGGTGGGATCTCCAGGGCAGCCCCATCCAGCATTTTCATTCAGGGTCCCGGAGCGGGTGTGGGCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS TCA 90 bp AGCAGACCACGAAACCACTGCCCACACCCGCTCCGGGACCCTGAATaGAAATGCTGGATGGGGCTGCCCTGGAGATCCCACCACAGTAGC +
Preference number: 5 (lower is better)
Translates to: SRPRNHCPHPLRDPE*KCWMGLPWRSHHSS
Trigger: GCTACTGTGGTGGGATCTCCAGGGCAGCCCCATCCAGCATTTTCATTCAGGGTCCCGGAGCGGGTGTGGGCAGTGGTTTCGTGGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS GCA 90 bp GCGCTGTCCTGGTCAACTCTAAGAAGCAACAAGCCTGGGCTCAGATaGCTGGTTCCACCTCAGGAGCTTCATAAGGGCTCCCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: ALSWSTLRSNKPGLR*LVPPQELHKGSPAL
Trigger: CAGGGCAGGGGAGCCCTTATGAAGCTCCTGAGGTGGAACCAGGCATCTGAGCCCAGGCTTGTTGCTTCTTAGAGTTGACCAGGACAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS GCA 90 bp AGGCACAGTTGTTCCATTGTGGGCACCCTAGGCCCTCTCATCCAATaGCACCAGCCCGGGGGCCTTATGCTCATTCCTCTAAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RHSCSIVGTLGPLIQ*HQPGGLMLIPLKKA
Trigger: TGCCTTCTTTAGAGGAATGAGCATAAGGCCCCCGGGCTGGTGGCATTGGATGAGAGGGCCTAGGGTGCCCACAATGGAACAACTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476612.1
CDS-3UTR CAA 90 bp TCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCCTCTGCTGGCAAGGGTaGATCCAGCATCTCCACATC +
Preference number: 5 (lower is better)
Translates to: SRGLEEKSRGRPGVCFSSLCWQG*IQHLHI
Trigger: GATGTGGAGATGCTGGATCAACCCTTGCCAGCAGAG...GGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGCCTTGTGGGAGTGGCTaGAAAGAATCCATAATTTCC +
Preference number: 5 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRPCGSG*KESIIS
Trigger: GGAAATTATGGATTCTTTCAAGCCACTCCCACAAGG...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp CAATCTACATTCCAGCCAGGGCTGGTGGTAAGTTCAGAAGAAAGCCACAGAGGCAGGATCTGGAGATCGTaGTGCAAAGCGCTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QSTFQPGLVVSSEESHRGRIWRS*CKALSW
Trigger: CCAGGACAGCGCTTTGCACAACGATCTCCAGATCCT...GCCTCTGTGGCTTTCTTCTGAACTTACCACCAGCCCTGGCTGGAATGTAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp CATCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCTAGTTCCCAGGCAGTaGTCCCAAGTCTGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: HLYQSNSGLVPLPTSQVVLVPRQ*SQVWVF
Trigger: GAAAACCCAGACTTGGGACAACTGCCTGGGAACTAG...AACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp CATCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTAGAGTTAGAGCAGCATaGAGTGGGACTGGTGGACTC +
Preference number: 5 (lower is better)
Translates to: HLYQSNSGLVPLPTSQVVRVRAA*SGTGGL
Trigger: GAGTCCACCAGTCCCACTCAATGCTGCTCTAACTCT...AACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp TCCAGAGGCCTTGAGGAGAAATCTAGGGGCAGACCAGGTGTGTGCTTCAGCTCCCTGTCCTGGTCAACTTaGAGGAGTTTGACATTCCAA +
Preference number: 5 (lower is better)
Translates to: SRGLEEKSRGRPGVCFSSLSWST*RSLTFQ
Trigger: TTGGAATGTCAAACTCCTCAAAGTTGACCAGGACAG...GGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCCTCAAGGCCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp TTTGGCAGGCCAGGCTCTGCATTCCAAGGGGGCAAGTGCTGGTTGCTCCAGAGGTCTTGTCAGACTGTATaGAGATTTGTTGGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FGRPGSAFQGGKCWLLQRSCQTV*RFVGSK
Trigger: TTTGGAGCCAACAAATCTCAATACAGTCTGACAAGA...CCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS CCA 90 bp TGTGCACTGCTCTGCTGGCAAGGGTTGATCCAGCATCTCCACATCTaGATGCTGAGGGAGGTTATAGAGTTTACACAGGTCGGAGATGAT +
Preference number: 5 (lower is better)
Translates to: CALLCWQGLIQHLHI*MLREVIEFTQVGDD
Trigger: ATCATCTCCGACCTGTGTAAACTCTATAACCTCCCTCAGCATCCAGATGTGGAGATGCTGGATCAACCCTTGCCAGCAGAGCAGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000497453.1
CDS-3UTR CAA 90 bp CATCATTGTCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATGAGGGAGGGCTACCACATTGTAGTTaGGCAGGCCAGGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: HHCPAIGRAITSRKNEGGLPHCS*AGQALH
Trigger: ATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTAG...CCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp TCTCTACCAAAGCAACAGTGGACTCGTACCCCTCCCCACCTCCCAAGTAGTTCATTCACTTGGCCATCTTaGGCCTCTGTCATTTCACTG +
Preference number: 5 (lower is better)
Translates to: SLPKQQWTRTPPHLPSSSFTWPS*ASVISL
Trigger: CAGTGAAATGACAGAGGCCAAAGATGGCCAAGTGAA...TGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS TCA 90 bp GGTCCAGGTGGTGAGTGGTCTCTAATGCAGACCCCTTTCCCAGACTaGGAGAAAAAGATCAACAGCTCTAGGTTCACCACAGATGGACAT +
Preference number: 5 (lower is better)
Translates to: GPGGEWSLMQTPFPD*EKKINSSRFTTDGH
Trigger: ATGTCCATCTGTGGTGAACCTAGAGCTGTTGATCTTTTTCTCTCAGTCTGGGAAAGGGGTCTGCATTAGAGACCACTCACCACCTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483639.1
CDS GCA 90 bp ATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTTGTaGAAAGCGCTGTCCTGGTCAACTCTAAGAAGCAACAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: MKSAPSFSLRIWRSL*KALSWSTLRSNKPG
Trigger: CCCAGGCTTGTTGCTTCTTAGAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS CCA 90 bp TCTTTCTCTTTGAGGATCTGGAGATCGTTGTGCAAAGCGCTGTCCTaGTCAACTCTAAGAAGCAACAAGCCTGGGCTCAGATGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: SFSLRIWRSLCKALS*STLRSNKPGLRCLV
Trigger: AACCAGGCATCTGAGCCCAGGCTTGTTGCTTCTTAGAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS-3UTR CAA 90 bp ATAAGAATGCCTGCTAGCAAGGGTTCCAGCAAGGTGGTTGGTTGGTCTGTAAGTTATGACTCCGTGATGTaGCAGTGGATGCGGACAGGA +
Preference number: 5 (lower is better)
Translates to: IRMPASKGSSKVVGWSVSYDSVM*QWMRTG
Trigger: TCCTGTCCGCATCCACTGCAACATCACGGAGTCATA...ACTTACAGACCAACCAACCACCTTGCTGGAACCCTTGCTAGCAGGCATTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAAGACTTGGGTCTTCACTaGGCCATCTTTGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQDLGLH*AIFGLC
Trigger: ACAGAGGCCAAAGATGGCCAAGTGAAGACCCAAGTC...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS CCA 90 bp TCAACAGCTCTAGGTTCACCACAGATGGACATGCAACCAAGCCACTaGCTTGAGGAGCTCCATTCTTGGCCTGAAAAGTTCATAAGCACT +
Preference number: 5 (lower is better)
Translates to: STALGSPQMDMQPSH*LEELHSWPEKFIST
Trigger: AGTGCTTATGAACTTTTCAGGCCAAGAATGGAGCTCCTCAAGCCAGTGGCTTGGTTGCATGTCCATCTGTGGTGAACCTAGAGCTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483639.1
CDS-3UTR CAA 90 bp GCATTACAGAACTGCTCTAGCATCCTAGTTCCCAGGCAGTTGTCCCAAGTCTGGCTACGAAGCAGCCTCTaGAGCCTCATTTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ALQNCSSILVPRQLSQVWLRSSL*SLIFFF
Trigger: GAAAAAGAAAATGAGGCTCAAGAGGCTGCTTCGTAG...CCAGACTTGGGACAACTGCCTGGGAACTAGGATGCTAGAGCAGTTCTGTAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS GCA 90 bp ATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTTGTaGAAAGCGCTGTCCTGGTCAACTTTGAGGAGTTTGACATTCCAA +
Preference number: 5 (lower is better)
Translates to: MKSAPSFSLRIWRSL*KALSWSTLRSLTFQ
Trigger: TTGGAATGTCAAACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000483639.1
CDS-3UTR CAA 90 bp CAGCATGTTTTATTAGCACCCCTAATTAGGTGGGTGTGGGTAGAGTTAGAGCAGGCTCCTTCTTTCTCTTaGAGGATCTGGAGATCGTTG +
Preference number: 5 (lower is better)
Translates to: QHVLLAPLIRWVWVELEQAPSFS*RIWRSL
Trigger: CAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGC...CTGCTCTAACTCTACCCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp ATAAGAATGCCTGCTAGCAAGGGTTCCAGCAAGGTGGTTGGTTGGTCTGTAAGTAGGACTGCTGTGCTCTaGTCAGACTGTATTGAGATT +
Preference number: 5 (lower is better)
Translates to: IRMPASKGSSKVVGWSVSRTAVL*SDCIEI
Trigger: AATCTCAATACAGTCTGACAAGAGCACAGCAGTCCT...ACTTACAGACCAACCAACCACCTTGCTGGAACCCTTGCTAGCAGGCATTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS CCA 90 bp AAGTTAAGTAGAATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTaGAGATCGTTGTGCAAAGCGCTGTCCTGGTCAACTTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: KLSRMKSAPSFSLRI*RSLCKALSWSTLRS
Trigger: ACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATTCTACTTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000483639.1
CDS CCA 90 bp AAGTTAAGTAGAATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTaGAGATCGTTGTGCAAAGCGCTGTCCTGGTCAACTCTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: KLSRMKSAPSFSLRI*RSLCKALSWSTLRS
Trigger: GCTTCTTAGAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATTCTACTTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS-3UTR CAA 90 bp GGGGAAAGAATGGCCAATGTGAAAATTGCTGTGTCTCAAAGCATTACAGAACTGCAGCAAGGTGGTTGGTaGGTCTGTAAGTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: GERMANVKIAVSQSITELQQGGW*VCKSVL
Trigger: CAAGACTGACTTACAGACCAACCAACCACCTTGCTG...CAGTTCTGTAATGCTTTGAGACACAGCAATTTTCACATTGGCCATTCTTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS TCA 90 bp CATCTGGATGCTGAGGGAGGTTATAGAGTTTACACAGGTCGGAGATaGTCCTCTTCAGATGCTGCAATAGCAGAGTATTCCCTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: HLDAEGGYRVYTGRR*SSSDAAIAEYSLSL
Trigger: TAAAGAAAGGGAATACTCTGCTATTGCAGCATCTGAAGAGGATCATCTCCGACCTGTGTAAACTCTATAACCTCCCTCAGCATCCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000497453.1
CDS-3UTR CAA 90 bp CATCATTGTCCTGCAATAGGCAGAGCTATCACGTCCAGGAAAAATGAGGGAGGGTCAACTTTGAGGAGTTaGACATTCCAATCATACAGA +
Preference number: 5 (lower is better)
Translates to: HHCPAIGRAITSRKNEGGSTLRS*TFQSYR
Trigger: TCTGTATGATTGGAATGTCAAACTCCTCAAAGTTGA...CCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp GTAGGACCCACCTTGTGGGAGTGGCTTGAAAGAATCCATAATTTCCCAAGCCAAGTCAGTCTTGAGTACTaGAAACAGTTCTGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: VGPTLWEWLERIHNFPSQVSLEY*KQFCVC
Trigger: ACAAACACAGAACTGTTTCAAGTACTCAAGACTGAC...TTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS-3UTR CAA 90 bp TTTCAGCTCTATGGAATGAATTTTCCCCTTATGTCCCGTCTTTATCTCAACCTCCTAGGTCTGTTCTTTTaGATAAAGCCAAATGAAGCA +
Preference number: 5 (lower is better)
Translates to: FQLYGMNFPLMSRLYLNLLGLFF*IKPNEA
Trigger: TGCTTCATTTGGCTTTATCAAAAAGAACAGACCTAG...GAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCCATAGAGCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS CAA 90 bp CTCAGCTCGTCCAGGCAGGCGCTCTGTGGGCGCCTCAGTGCGAGTTaGCGTATGTCGTGCGTGCTTGCGCGCGACGCCCCTTCGCCTGCG +
Preference number: 6 (lower is better)
Translates to: LSSSRQALCGRLSAS*RMSCVLARDAPSPA
Trigger: CGCAGGCGAAGGGGCGTCGCGCGCAAGCACGCACGACATACGCAAACTCGCACTGAGGCGCCCACAGAGCGCCTGCCTGGACGAGCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS GCA 72 bp TATGTCGTGCGTGCTTGCGCGCGACGCCCCTTCGCCTaGGCTCCCCTCTCACGTGACTCGGTGCCGCGTGCT +
Preference number: 6 (lower is better)
Translates to: YVVRACARRPFA*APLSRDSVPRA
Trigger: AGCACGCGGCACCGAGTCACGTGAGAGGGGAGCGCAGGCGAAGGGGCGTCGCGCGCAAGCACGCACGACATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS GCA 72 bp CTCTGTGGGCGCCTCAGTGCGAGTTTGCGTATGTCGTaGGTGCTTGCGCGCGACGCCCCTTCGCCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: LCGRLSASLRMS*VLARDAPSPAL
Trigger: GAGCGCAGGCGAAGGGGCGTCGCGCGCAAGCACGCACGACATACGCAAACTCGCACTGAGGCGCCCACAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS GCA 72 bp CCAGGCAGGCGCTCTGTGGGCGCCTCAGTGCGAGTTTaGGTATGTCGTGCGTGCTTGCGCGCGACGCCCCTT +
Preference number: 6 (lower is better)
Translates to: PGRRSVGASVRV*VCRACLRATPL
Trigger: AAGGGGCGTCGCGCGCAAGCACGCACGACATACGCAAACTCGCACTGAGGCGCCCACAGAGCGCCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS CAA 72 bp TCCAGGCAGGCGCTCTGTGGGCGCCTCAGTGCGAGTTaGCGTATGTCGTGCGTGCTTGCGCGCGACGCCCCT +
Preference number: 6 (lower is better)
Translates to: SRQALCGRLSAS*RMSCVLARDAP
Trigger: AGGGGCGTCGCGCGCAAGCACGCACGACATACGCAAACTCGCACTGAGGCGCCCACAGAGCGCCTGCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS GCA 72 bp ACTCGCAGCTCAGCTCGTCCAGGCAGGCGCTGGCAATaGGGAAGCGCTCGTGGCCGCGGTGGAAGATGGACT +
Preference number: 6 (lower is better)
Translates to: TRSSARPGRRWQ*GSARGRGGRWT
Trigger: AGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGAGCTGAGCTGCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS GCA 72 bp CAGCTCGTCCAGGCAGGCGCTCTGTGGGCGCCTCAGTaGGAGTTTGCGTATGTCGTGCGTGCTTGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: QLVQAGALWAPQ*EFAYVVRACAR
Trigger: TCGCGCGCAAGCACGCACGACATACGCAAACTCGCACTGAGGCGCCCACAGAGCGCCTGCCTGGACGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497453.1
CDS CCA 72 bp CAGGCGCTGGCAATGCGGAAGCGCTCGTGGCCGCGGTaGAAGATGGACTCGAGCAGCTTCAGCTCTCGCCTC +
Preference number: 6 (lower is better)
Translates to: QALAMRKRSWPR*KMDSSSFSSRL
Trigger: GAGGCGAGAGCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS CCA 72 bp TCGTCCAGGCAGGCGCTGGCAATGCGGAAGCGCTCGTaGCCGCGGTGGAAGATGGACTCGAGCAGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SSRQALAMRKRS*PRWKMDSSSFS
Trigger: GCTGAAGCTGCTCGAGTCCATCTTCCACCGCGGCCACGAGCGCTTCCGCATTGCCAGCGCCTGCCTGGACGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000292211.5
CDS TCA 72 bp CGAAACCACTGCCCACACCCGCTCCGGGACCCTGAATaGAAATGCTGGATGGGGCTGCCCTGGAGATCCCAC +
Preference number: 6 (lower is better)
Translates to: RNHCPHPLRDPE*KCWMGLPWRSH
Trigger: GTGGGATCTCCAGGGCAGCCCCATCCAGCATTTTCATTCAGGGTCCCGGAGCGGGTGTGGGCAGTGGTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS CCA 72 bp CACACCCGCTCCGGGACCCTGAATGAAAATGCTGGATaGGGCTGCCCTGGAGATCCCACCACAGTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: HTRSGTLNENAG*GCPGDPTTVAP
Trigger: TGGGGCTACTGTGGTGGGATCTCCAGGGCAGCCCCATCCAGCATTTTCATTCAGGGTCCCGGAGCGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS TCA 72 bp ACCACGAAACCACTGCCCACACCCGCTCCGGGACCCTaGATGAAAATGCTGGATGGGGCTGCCCTGGAGATC +
Preference number: 6 (lower is better)
Translates to: TTKPLPTPAPGP*MKMLDGAALEI
Trigger: GATCTCCAGGGCAGCCCCATCCAGCATTTTCATTCAGGGTCCCGGAGCGGGTGTGGGCAGTGGTTTCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS GCA 72 bp TGTTCCATTGTGGGCACCCTAGGCCCTCTCATCCAATaGCACCAGCCCGGGGGCCTTATGCTCATTCCTCTA +
Preference number: 6 (lower is better)
Translates to: CSIVGTLGPLIQ*HQPGGLMLIPL
Trigger: TAGAGGAATGAGCATAAGGCCCCCGGGCTGGTGGCATTGGATGAGAGGGCCTAGGGTGCCCACAATGGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476612.1
CDS CCA 72 bp AGCGCTGTCCTGGTCAACTCTAAGAAGCAACAAGCCTaGGCTCAGATGCCTGGTTCCACCTCAGGAGCTTCA +
Preference number: 6 (lower is better)
Translates to: SAVLVNSKKQQA*AQMPGSTSGAS
Trigger: TGAAGCTCCTGAGGTGGAACCAGGCATCTGAGCCCAGGCTTGTTGCTTCTTAGAGTTGACCAGGACAGCGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS GCA 72 bp TGGTCAACTCTAAGAAGCAACAAGCCTGGGCTCAGATaGCTGGTTCCACCTCAGGAGCTTCATAAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: WSTLRSNKPGLR*LVPPQELHKGS
Trigger: GGAGCCCTTATGAAGCTCCTGAGGTGGAACCAGGCATCTGAGCCCAGGCTTGTTGCTTCTTAGAGTTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS CAA 72 bp ATAAGCACTCCTGGACCCCAGAACCTCTTGGGCCCCTaGCCACCATACCCTTCTTTATGGGTGACTCTTGTG +
Preference number: 6 (lower is better)
Translates to: ISTPGPQNLLGP*PPYPSLWVTLV
Trigger: CACAAGAGTCACCCATAAAGAAGGGTATGGTGGCAAGGGGCCCAAGAGGTTCTGGGGTCCAGGAGTGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483639.1
CDS GCA 72 bp GTTCCATGCAGATGGCCCCTCCGCCCAGAACATACCTaGATGAGAAAGGTTAGTCAGCTGTGCCTGACAAAA +
Preference number: 6 (lower is better)
Translates to: VPCRWPLRPEHT*MRKVSQLCLTK
Trigger: TTTTGTCAGGCACAGCTGACTAACCTTTCTCATGCAGGTATGTTCTGGGCGGAGGGGCCATCTGCATGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491572.1
CDS CCA 72 bp CTCTGCTGGCAAGGGTTGATCCAGCATCTCCACATCTaGATGCTGAGGGAGGTTATAGAGTTTACACAGGTC +
Preference number: 6 (lower is better)
Translates to: LCWQGLIQHLHI*MLREVIEFTQV
Trigger: GACCTGTGTAAACTCTATAACCTCCCTCAGCATCCAGATGTGGAGATGCTGGATCAACCCTTGCCAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000497453.1
CDS CCA 72 bp CTAGGTTCACCACAGATGGACATGCAACCAAGCCACTaGCTTGAGGAGCTCCATTCTTGGCCTGAAAAGTTC +
Preference number: 6 (lower is better)
Translates to: LGSPQMDMQPSH*LEELHSWPEKF
Trigger: GAACTTTTCAGGCCAAGAATGGAGCTCCTCAAGCCAGTGGCTTGGTTGCATGTCCATCTGTGGTGAACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483639.1
CDS CAA 72 bp TCGGCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTaGTGCAAAGCGCTGTCCTGGTCAACTTTGAGGAGT +
Preference number: 6 (lower is better)
Translates to: SAPSFSLRIWRS*CKALSWSTLRS
Trigger: ACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000483639.1
CDS CAA 72 bp TCGGCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTaGTGCAAAGCGCTGTCCTGGTCAACTCTAAGAAGC +
Preference number: 6 (lower is better)
Translates to: SAPSFSLRIWRS*CKALSWSTLRS
Trigger: GCTTCTTAGAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS GCA 72 bp GCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTTGTaGAAAGCGCTGTCCTGGTCAACTTTGAGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: APSFSLRIWRSL*KALSWSTLRSL
Trigger: CAAACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000483639.1
CDS GCA 72 bp TTCGTGGATCTGCACCAAGGACTTGTAGGACTGCTGTaGTCTTGTCAGACTGTATTGAGATTTGTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: FVDLHQGLVGLL*SCQTVLRFVGS
Trigger: GGAGCCAACAAATCTCAATACAGTCTGACAAGAGCACAGCAGTCCTACAAGTCCTTGGTGCAGATCCACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000467683.5
CDS GCA 72 bp GCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTTGTaGAAAGCGCTGTCCTGGTCAACTCTAAGAAGCAAC +
Preference number: 6 (lower is better)
Translates to: APSFSLRIWRSL*KALSWSTLRSN
Trigger: GTTGCTTCTTAGAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS CCA 72 bp AGAATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTaGAGATCGTTGTGCAAAGCGCTGTCCTGGTCAACT +
Preference number: 6 (lower is better)
Translates to: RMKSAPSFSLRI*RSLCKALSWST
Trigger: AGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292211.5
ENST00000474181.1
ENST00000483639.1
CDS CAA 90 bp AGAATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTaGTGCAAAGCGCTGTCCTGGTCAACTCTAAGAAGCAACAAGCCT +
Preference number: 6 (lower is better)
Translates to: RMKSAPSFSLRIWRS*CKALSWSTLRSNKP
Trigger: AGGCTTGTTGCTTCTTAGAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474181.1
CDS CAA 90 bp AGAATGAAGTCGGCTCCTTCTTTCTCTTTGAGGATCTGGAGATCGTaGTGCAAAGCGCTGTCCTGGTCAACTTTGAGGAGTTTGACATTC +
Preference number: 6 (lower is better)
Translates to: RMKSAPSFSLRIWRS*CKALSWSTLRSLTF
Trigger: GAATGTCAAACTCCTCAAAGTTGACCAGGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000483639.1
CDS TCA 72 bp GCTGAGGGAGGTTATAGAGTTTACACAGGTCGGAGATaGTCCTCTTCAGATGCTGCAATAGCAGAGTATTCC +
Preference number: 6 (lower is better)
Translates to: AEGGYRVYTGRR*SSSDAAIAEYS
Trigger: GGAATACTCTGCTATTGCAGCATCTGAAGAGGATCATCTCCGACCTGTGTAAACTCTATAACCTCCCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000497453.1
CDS CAA 72 bp GGATCTGCACCAAGGACTTGTAGGACTGCTGTGCTCTaGTCAGACTGTATTGAGATTTGTTGGCTCCAAACT +
Preference number: 6 (lower is better)
Translates to: GSAPRTCRTAVL*SDCIEICWLQT
Trigger: AGTTTGGAGCCAACAAATCTCAATACAGTCTGACAAGAGCACAGCAGTCCTACAAGTCCTTGGTGCAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292211.5
ENST00000467683.5
CDS CAA 72 bp AAGTTAAGTAGAATGAAGTCGGCTCCTTCTTTCTCTTaGAGGATCTGGAGATCGTTGTGCAAAGCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: KLSRMKSAPSFS*RIWRSLCKALS
Trigger: GGACAGCGCTTTGCACAACGATCTCCAGATCCTCAAAGAGAAAGAAGGAGCCGACTTCATTCTACTTAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000292211.5
ENST00000474181.1
ENST00000483639.1