Pregenerated sensors for UBE2N (Homo sapiens)
Ensembl gene IDs: ENSG00000177889Ensembl transcript IDs: ENST00000318066.7, ENST00000550657.1
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTTTTCTTCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTaGCTGGAGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: FFSSLPGLCRCCCSL*LEMFIWPESKSLSK Trigger: CTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAAGAAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CCA 90 bp | TTTCTTCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTaGAGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: FLLSQDFADAAVPSA*RCSSGLNPKVCPSY Trigger: GTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CCA 90 bp | GGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCTaGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCATG | + |
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Preference number: 1 (lower is better) Translates to: GLCRCCCSLCLEMFI*PESKSLSKLLLFSM Trigger: CATGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR TCA 90 bp | TTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCTGGCCTaGATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCATGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LQMLLFPLPGDVHLA*IQKSVQVTSLFHDR Trigger: TCTGTCATGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CCA 90 bp | GTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGTaGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: VSATQILSVKSRAQR*VRSTVARSSDHSKV Trigger: AACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR GCA 90 bp | TTAATGTTCAGATTCTTTTCTTCTCTCCCAGGACTTTGCAGATGCTaGTGTTCCCTCTGCCTGGAGATGTTCATCTGGCCTGAATCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LMFRFFSSLPGLCRC*CSLCLEMFIWPESK Trigger: TTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAAGAAAAGAATCTGAACATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR GCA 90 bp | GGCCAGTTTATAAATACTCCATTCAGTACTATCTTAACACAAATCTaGATCAGTGAAAAGAAACTGGCAAAATCCACCTCTTGCCATTCA | + |
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Preference number: 1 (lower is better) Translates to: GQFINTPFSTILTQI*ISEKKLAKSTSCHS Trigger: TGAATGGCAAGAGGTGGATTTTGCCAGTTTCTTTTCACTGATGCAGATTTGTGTTAAGATAGTACTGAATGGAGTATTTATAAACTGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR CAA 90 bp | AGGAAGCCACTTAATGTTCAGATTCTTTTCTTCTCTCCCAGGACTTaGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RKPLNVQILFFSPRT*QMLLFPLPGDVHLA Trigger: GGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAAGAAAAGAATCTGAACATTAAGTGGCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCAAAAAGGTCAGATACTaGTGCTTTATGCATGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SLPGLCRCCCSLCLEMFIKKVRY*CFMHAQ Trigger: CTGAGCATGCATAAAGCATCAGTATCTGACCTTTTT...GATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGCACAAGCTAGATAGTTaGGATCTGCTCATCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: ALRVSATQILSVKSRAQRHKLDS*DLLIRF Trigger: AAACCTGATGAGCAGATCTCAACTATCTAGCTTGTG...CCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACACCCTAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGCATGTCAGTCACAACTaGTATCTTTGCTGTGACTTT | + |
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Preference number: 2 (lower is better) Translates to: ALRVSATQILSVKSRAQRHVSHN*YLCCDF Trigger: AAAGTCACAGCAAAGATAGCAGTTGTGACTGACATG...CCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACACCCTAAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR GCA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCAGCAGTTTTCAACTGCTaGCTTGGCCTCTCCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPAVFNC*LGLSQS Trigger: GCTCTGGGAGAGGCCAAGGCAGCAGTTGAAAACTGC...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CAA 90 bp | TCCTCTCAGTTAAGTCCCGTGCACAAAGGTGGGTCAGGTCTACTGTaGCCAGATCTTCAGATCATTCAAAAGTTACCCGAATTCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: SSQLSPVHKGGSGLL*PDLQIIQKLPEFWI Trigger: AATCCAGAATTCGGGTAACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCACGGGACTTAACTGAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR CCA 90 bp | TCACCACCTAATCATCCCCAACAACTAGTGGGCAAACATGAAACACTTTTGTTGGGGACTCTAGCCAACTaGAGAGTAACTGGTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SPPNHPQQLVGKHETLLLGTLAN*RVTGEK Trigger: CTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCC...CAACAAAAGTGTTTCATGTTTGCCCACTAGTTGTTGGGGATGATTAGGTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | TTAGATATGGAGAGAGGTGGGAAAGAACAGTTTTGTGAGGGGAGGAATTCGTCAAATGTGGCACAACTGTaGAAGTCCTACATGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LDMERGGKEQFCEGRNSSNVAQL*KSYMSV Trigger: GACTGACATGTAGGACTTTCACAGTTGTGCCACATT...TGACGAATTCCTCCCCTCACAAAACTGTTCTTTCCCACCTCTCTCCATATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR GCA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTGATACTGATGCTTTATaGATGCTCAGGGCCAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSDTDAL*MLRASL Trigger: TAAACTGGCCCTGAGCATGCATAAAGCATCAGTATC...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR GCA 90 bp | TCACCACCTAATCATCCCCAACAACTAGTGGGCAAACATGAAACACTTTTGTTGAGGAAGACTCACAAATaGCTCAGCAAATCCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: SPPNHPQQLVGKHETLLLRKTHK*LSKSQM Trigger: CATTTGGGATTTGCTGAGGCATTTGTGAGTCTTCCT...CAACAAAAGTGTTTCATGTTTGCCCACTAGTTGTTGGGGATGATTAGGTGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR GCA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTTGCAAGAGACAAGGTTaGAACCCGAAGGTTAACATT | + |
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Preference number: 2 (lower is better) Translates to: HDRVTTICLSPFPIRVYGCKRQG*NPKVNI Trigger: AATGTTAACCTTCGGGTTGCAACCTTGTCTCTTGCA...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR GCA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTTCCATTACCTTAAACTaGAAGAGACAAGGTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSSITLN*KRQGCN Trigger: GTTGCAACCTTGTCTCTTGCAGTTTAAGGTAATGGA...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCAATGTGGCACAACTGTaGAAGTCCTACATGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CHSICQMVKTKKECSISFNVAQL*KSYMSV Trigger: GACTGACATGTAGGACTTTCACAGTTGTGCCACATT...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR TCA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTCAATTTGTCAGATGGTaGAGACCAAGAAAGAATGTT | + |
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Preference number: 2 (lower is better) Translates to: HDRVTTICLSPFPIRVYGQFVRW*RPRKNV Trigger: AACATTCTTTCTTGGTCTTCACCATCTGACAAATTG...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTACAAATCTGCATCAGTaGAAAGAAACTGGCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: HDRVTTICLSPFPIRVYGTNLHQ*KETGKI Trigger: GATTTTGCCAGTTTCTTTTCACTGATGCAGATTTGT...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | TCACCACCTAATCATCCCCAACAACTAGTGGGCAAACATGAAACACTTTTGTTGACGGGCAGTAAATGTTaGTTTCTATTTCGTTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPPNHPQQLVGKHETLLLTGSKC*FLFRFL Trigger: CAAGAAACGAAATAGAAATCAACATTTACTGCCCGT...CAACAAAAGTGTTTCATGTTTGCCCACTAGTTGTTGGGGATGATTAGGTGGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCAATTTGTCAGATGGTaGAGACCAAGAAAGAATGTT | + |
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Preference number: 2 (lower is better) Translates to: KMWHNCESPTCQSQLLSLQFVRW*RPRKNV Trigger: AACATTCTTTCTTGGTCTTCACCATCTGACAAATTG...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR TCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGACAAATCTGCATCAGTaGAAAGAAACTGGCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: KMWHNCESPTCQSQLLSLTNLHQ*KETGKI Trigger: GATTTTGCCAGTTTCTTTTCACTGATGCAGATTTGT...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR GCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCCTGATGCTTTATGCATaGTCAGGGCCAGTTTATAAA | + |
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Preference number: 2 (lower is better) Translates to: CHSICQMVKTKKECSISFLMLYA*SGPVYK Trigger: TTTATAAACTGGCCCTGAGCATGCATAAAGCATCAG...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR GCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCTCCATTACCTTAAACTaGAAGAGACAAGGTTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CHSICQMVKTKKECSISFSITLN*KRQGCN Trigger: GTTGCAACCTTGTCTCTTGCAGTTTAAGGTAATGGA...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR TCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCGCAAGAATCATTAACTaGGGACTTGATACTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: CHSICQMVKTKKECSISFARIIN*GLDTLK Trigger: TTTGAGAGTATCAAGTCCTCAGTTAATGATTCTTGC...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR CAA 90 bp | TTGTGTAGATTGTATGCATATACAACATCATTTTATTCCAGAGACTaGAGCATCTGCGAATTTGGATATCCAAAGGAAGTCCTAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: LCRLYAYTTSFYSRD*SICEFGYPKEVLEP Trigger: TGGTTCTAGGACTTCCTTTGGATATCCAAATTCGCAGATGCTCAAGTCTCTGGAATAAAATGATGTTGTATATGCATACAATCTACACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR TCA 90 bp | GCCAGATCTTCAGATCATTCAAAAGTTACCCGAATTCTGGATTTTCATGCAAATCAAATACTGGAGGGATaGAAGCAAGAATCATTAACT | + |
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Preference number: 2 (lower is better) Translates to: ARSSDHSKVTRILDFHANQILEG*KQESLT Trigger: AGTTAATGATTCTTGCTTTCATCCCTCCAGTATTTG...ATTTGCATGAAAATCCAGAATTCGGGTAACTTTTGAATGATCTGAAGATCTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR GCA 72 bp | GCCCAAAGGCCAGGTGAAGCTGCAGTTTTCAACTGCTaGCTTGGCCTCTCCCAGAGCCCCTTAAGTCCTAAG | + |
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Preference number: 3 (lower is better) Translates to: AQRPGEAAVFNC*LGLSQSPLSPK Trigger: CTTAGGACTTAAGGGGCTCTGGGAGAGGCCAAGGCAGCAGTTGAAAACTGCAGCTTCACCTGGCCTTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR GCA 72 bp | TCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTaGCTGGAGATGTTCATCTGGCCTGAATCCAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: SLPGLCRCCCSL*LEMFIWPESKS Trigger: ACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CCA 72 bp | TCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTaGAGATGTTCATCTGGCCTGAATCCAAAAGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SQDFADAAVPSA*RCSSGLNPKVC Trigger: ACAGACTTTTGGATTCAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR GCA 72 bp | AGATTCTTTTCTTCTCTCCCAGGACTTTGCAGATGCTaGTGTTCCCTCTGCCTGGAGATGTTCATCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: RFFSSLPGLCRC*CSLCLEMFIWP Trigger: AGGCCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAAGAAAAGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR CAA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCACAGAGTTACAACTATTaGTCTGTCCCCCTTCCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPQSYNY*SVPLPH Trigger: ATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTG...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR CAA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTGGCAAAATCCACCTCTaGCCATTCAATTTGTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: HDRVTTICLSPFPIRVYGGKIHL*PFNLSD Trigger: ATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CCA 72 bp | ATCATTTTATTCCAGAGACTTGAGCATCTGCGAATTTaGATATCCAAAGGAAGTCCTAGAACCAGTTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: IILFQRLEHLRI*ISKGSPRTSSR Trigger: TCGGGAACTGGTTCTAGGACTTCCTTTGGATATCCAAATTCGCAGATGCTCAAGTCTCTGGAATAAAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR-3UTR CAA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCCTCTTGCCATTCAATTaGTCAGATGGTGAAGACCAA | + |
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Preference number: 3 (lower is better) Translates to: CHSICQMVKTKKECSISFLLPFN*SDGEDQ Trigger: TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAG...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR-3UTR CAA 90 bp | GCCAGATCTTCAGATCATTCAAAAGTTACCCGAATTCTGGATTTTCATGCAAATGTTTCATCCCACTGGTaGAGAAAGCAAGTCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: ARSSDHSKVTRILDFHANVSSHW*RKQVLA Trigger: TGCTAAGACTTGCTTTCTCAACCAGTGGGATGAAAC...ATTTGCATGAAAATCCAGAATTCGGGTAACTTTTGAATGATCTGAAGATCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR TCA 72 bp | AATTCCCTAAGATGGGTGGCATGCCAAGTAGCTAAATaGAATATCATCCCAGCCCAAAAGTACTTATTCGAA | + |
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Preference number: 3 (lower is better) Translates to: NSLRWVACQVAK*NIIPAQKYLFE Trigger: TTCGAATAAGTACTTTTGGGCTGGGATGATATTTCATTTAGCTACTTGGCATGCCACCCATCTTAGGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR GCA 72 bp | GATCTGCTCATCAGGTTTATAAGGAAGACTCACAAATaGCTCAGCAAATCCCAAATGATCAGATCAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: DLLIRFIRKTHK*LSKSQMIRSVF Trigger: AAACACTGATCTGATCATTTGGGATTTGCTGAGGCATTTGTGAGTCTTCCTTATAAACCTGATGAGCAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| 3UTR TCA 72 bp | TGTATGCATATACAACATCATTTTATTCCAGAGACTTaGGCATCTGCGAATTTGGATATCCAAAGGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: CMHIQHHFIPET*ASANLDIQRKS Trigger: GGACTTCCTTTGGATATCCAAATTCGCAGATGCTCAAGTCTCTGGAATAAAATGATGTTGTATATGCATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCCCAGGACTTTGCAGATaGTGCTGTTCCCTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLPGLCRCCCSLCLEMFIPGLCR*CCSLCL Trigger: CAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGG...GATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | GCTCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGGCAGTTTTCAACTGCTaGCTTGGCCTCTCCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ALRVSATQILSVKSRAQRAVFNC*LGLSQS Trigger: GCTCTGGGAGAGGCCAAGGCAGCAGTTGAAAACTGC...CCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACACCCTAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | GCTCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGTGCTGCTGTTCCCTCTaGCTGGAGATGTTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: ALRVSATQILSVKSRAQRCCCSL*LEMFIW Trigger: CCAGATGAACATCTCCAGGCAGAGGGAACAGCAGCA...CCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACACCCTAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | GCTCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGTCTCTCCCAGGACTTTaGAGATGCTGCTGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: ALRVSATQILSVKSRAQRSLPGL*RCCCSL Trigger: GAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA...CCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACACCCTAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTAGGCATGAGCCACTGTaGCCGGCCTGGGCAGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: HDRVTTICLSPFPIRVYGRHEPL*PAWAVD Trigger: ATCGACTGCCCAGGCCGGGCACAGTGGCTCATGCCT...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR TCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACAGGCAGAACCTGCAGTaGGCCAAGATCATGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDRQNLQ*AKIMPQ Trigger: CTGTGGCATGATCTTGGCTCACTGCAGGTTCTGCCT...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTGGCCCAAAGGCCAGGTaGAGCTGCAGTTTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSGPKAR*SCSFQL Trigger: CAGTTGAAAACTGCAGCTTCACCTGGCCTTTGGGCC...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAACCACTGTGCCCGGCCTaGGCAGTCGATTTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQPLCPA*AVDFQE Trigger: TTCCTGAAAATCGACTGCCCAGGCCGGGCACAGTGG...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCGAGCATCTGCGAATTTaGATATCCAAAGGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPGLCRCCCSLCLEMFIEHLRI*ISKGSP Trigger: AGGACTTCCTTTGGATATCCAAATTCGCAGATGCTC...GATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTCCTGGCCCAACATGGTaGAACCCCGTCTCTACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSPGPTW*NPVSTK Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGGCCAGG...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTTTTCAACTGCTGCCTTaGCCTCTCCCAGAGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HDRVTTICLSPFPIRVYGFQLLP*PLPEPL Trigger: AAGGGGCTCTGGGAGAGGCCAAGGCAGCAGTTGAAA...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | TCACCACCTAATCATCCCCAACAACTAGTGGGCAAACATGAAACACTTTTGTTGGCTGTTCCCTCTGCCTaGAGATGTTCATCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPNHPQQLVGKHETLLLAVPSA*RCSSGL Trigger: CAGGCCAGATGAACATCTCCAGGCAGAGGGAACAGC...CAACAAAAGTGTTTCATGTTTGCCCACTAGTTGTTGGGGATGATTAGGTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR GCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAAAACAGGCCCAGAACTaGTTCACTTCCCTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERKQAQN*FTSLPQ Trigger: CTGTGGGAGGGAAGTGAAGCAGTTCTGGGCCTGTTT...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS-3UTR CCA 90 bp | TTAGATATGGAGAGAGGTGGGAAAGAACAGTTTTGTGAGGGGAGGAATTCGTCAGGGACTCTAGCCAACTaGAGAGTAACTGGTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDMERGGKEQFCEGRNSSGTLAN*RVTGEK Trigger: CTTCTCACCAGTTACTCTCCAGTTGGCTAGAGTCCC...TGACGAATTCCTCCCCTCACAAAACTGTTCTTTCCCACCTCTCTCCATATCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAAGATGGAGACCATCCTaGCCCAACATGGTGAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERRWRPS*PNMVKP Trigger: GGGTTTCACCATGTTGGGCCAGGATGGTCTCCATCT...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR TCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACAATGTGGCACAACTGTaGAAGTCCTACATGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDNVAQL*KSYMSV Trigger: GACTGACATGTAGGACTTTCACAGTTGTGCCACATT...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR TCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGGGACCACTTATCTATaGAGGCAACAGGCCCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQGTTYL*RQQAQY Trigger: ATACTGGGCCTGTTGCCTTCATAGATAAGTGGTCCC...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550657.1 |
||
| CDS-3UTR CCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAGCTCAGTCAACACACTaGCACTCGTTTCATCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERAQSTH*HSFHPT Trigger: AGTGGGATGAAACGAGTGCCAGTGTGTTGACTGAGC...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR CCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACCTGGAGATGTTCATCTaGCCTGAATCCAAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDLEMFI*PESKSL Trigger: CAGACTTTTGGATTCAGGCCAGATGAACATCTCCAG...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCAGGCCCTCCATATCCATaGGTTCCACTTCCGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPGPPYP*VPLPWI Trigger: AATCCACGGAAGTGGAACCCATGGATATGGAGGGCC...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| 3UTR CAA 72 bp | TTAAGTCCCGTGCACAAAGGTGGGTCAGGTCTACTGTaGCCAGATCTTCAGATCATTCAAAAGTTACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPVHKGGSGLL*PDLQIIQKLPE Trigger: TTCGGGTAACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCACGGGACTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACCACAAGCTAGATAGTTaGGATCTGCTCATCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDHKLDS*DLLIRF Trigger: AAACCTGATGAGCAGATCTCAACTATCTAGCTTGTG...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR GCA 90 bp | GCCAGATCTTCAGATCATTCAAAAGTTACCCGAATTCTGGATTTTCATGCAAATGGACTTTGCAGATGCTaGTGTTCCCTCTGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSSDHSKVTRILDFHANGLCRC*CSLCLE Trigger: CTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCC...ATTTGCATGAAAATCCAGAATTCGGGTAACTTTTGAATGATCTGAAGATCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR TCA 90 bp | TTAGATATGGAGAGAGGTGGGAAAGAACAGTTTTGTGAGGGGAGGAATTCGTCAGAAAGAACAGTTTTGTaGGGGGAGGAATTCGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LDMERGGKEQFCEGRNSSERTVL*GEEFVN Trigger: ATTGACGAATTCCTCCCCTCACAAAACTGTTCTTTC...TGACGAATTCCTCCCCTCACAAAACTGTTCTTTCCCACCTCTCTCCATATCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR CCA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTCTCGTTTCATCCCACTaGTTGAGAAAGCAAGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSLVSSH*LRKQVL Trigger: TAAGACTTGCTTTCTCAACCAGTGGGATGAAACGAG...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR CCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCCTGGTCACAAACTCCTaGACTCAAGTGATCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHSICQMVKTKKECSISFLVTNS*TQVILL Trigger: CAGGAGGATCACTTGAGTCCAGGAGTTTGTGACCAG...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACACAAATCTGCATCAGTaGAAAGAAACTGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDTNLHQ*KETGKI Trigger: GATTTTGCCAGTTTCTTTTCACTGATGCAGATTTGT...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR TCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGAATGTGGCACAACTGTaGAAGTCCTACATGTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KMWHNCESPTCQSQLLSLNVAQL*KSYMSV Trigger: GACTGACATGTAGGACTTTCACAGTTGTGCCACATT...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR TCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACCAAATACTGGAGGGATaGAAGCAAGAATCATTAACT | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDQILEG*KQESLT Trigger: AGTTAATGATTCTTGCTTTCATCCCTCCAGTATTTG...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR TCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCAGCCTTTGAGAGGATaGAGGATAACTAGAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KMWHNCESPTCQSQLLSLQPLRG*RITRAE Trigger: TTCTGCTCTAGTTATCCTTCATCCTCTCAAAGGCTG...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGATGCCAAGTAGCTAAATaGAATATCATCCCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERCQVAK*NIIPAQ Trigger: TTGGGCTGGGATGATATTTCATTTAGCTACTTGGCA...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | CATGACAGAGTTACAACTATTTGTCTGTCCCCCTTCCCCATTAGAGTATATGGTGATACTGATGCTTTATaGATGCTCAGGGCCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HDRVTTICLSPFPIRVYGDTDAL*MLRASL Trigger: TAAACTGGCCCTGAGCATGCATAAAGCATCAGTATC...ACCATATACTCTAATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTGTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAAGGAAGACTCACAAATaGCTCAGCAAATCCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQRKTHK*LSKSQM Trigger: CATTTGGGATTTGCTGAGGCATTTGTGAGTCTTCCT...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR GCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAATGCAAGAGACAAGGTTaGAACCCGAAGGTTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQCKRQG*NPKVNI Trigger: AATGTTAACCTTCGGGTTGCAACCTTGTCTCTTGCA...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR CCA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACAGCAATGCATTTATTTaGAAGGATACCAGTTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDSNAFI*KDTSYQ Trigger: CTGGTAACTGGTATCCTTCCAAATAAATGCATTGCT...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | TTAGATATGGAGAGAGGTGGGAAAGAACAGTTTTGTGAGGGGAGGAATTCGTCACAATTTGTCAGATGGTaGAGACCAAGAAAGAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDMERGGKEQFCEGRNSSQFVRW*RPRKNV Trigger: AACATTCTTTCTTGGTCTTCACCATCTGACAAATTG...TGACGAATTCCTCCCCTCACAAAACTGTTCTTTCCCACCTCTCTCCATATCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR TCA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTACAAATCTGCATCAGTaGAAAGAAACTGGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSTNLHQ*KETGKI Trigger: GATTTTGCCAGTTTCTTTTCACTGATGCAGATTTGT...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAATTTATTCCAGAGACTTaGGCATCTGCGAATTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQFIPET*ASANLD Trigger: ATCCAAATTCGCAGATGCTCAAGTCTCTGGAATAAA...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGATCCCACAGACCTCTCTaGTCTTTGTATAATGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERSHRPL*SLYNVY Trigger: GTAAACATTATACAAAGATCAGAGAGGTCTGTGGGA...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS-3UTR GCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAACTGATGCTTTATGCATaGTCAGGGCCAGTTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQLMLYA*SGPVYK Trigger: TTTATAAACTGGCCCTGAGCATGCATAAAGCATCAG...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR GCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGGATACTGATGCTTTATaGATGCTCAGGGCCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KMWHNCESPTCQSQLLSLDTDAL*MLRASL Trigger: TAAACTGGCCCTGAGCATGCATAAAGCATCAGTATC...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR GCA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCACACAACTGCTATCTTTaGTGTGACTTTCCTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPHNCYL*CDFPVQ Trigger: CTGTACAGGAAAGTCACAGCAAAGATAGCAGTTGTG...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | GAAACTGGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAACATGTCAGTCACAACTaGTATCTTTGCTGTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETGKIHLLPFNLSDGEDQHVSHN*YLCCDF Trigger: AAAGTCACAGCAAAGATAGCAGTTGTGACTGACATG...TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCCAGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR GCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGAGGAAGACTCACAAATaGCTCAGCAAATCCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KMWHNCESPTCQSQLLSLRKTHK*LSKSQM Trigger: CATTTGGGATTTGCTGAGGCATTTGTGAGTCTTCCT...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR GCA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGTGCAAGAGACAAGGTTaGAACCCGAAGGTTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: KMWHNCESPTCQSQLLSLCKRQG*NPKVNI Trigger: AATGTTAACCTTCGGGTTGCAACCTTGTCTCTTGCA...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR GCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGATCCATTACCTTAAACTaGAAGAGACAAGGTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERSITLN*KRQGCN Trigger: GTTGCAACCTTGTCTCTTGCAGTTTAAGGTAATGGA...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR TCA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGACAATTTGTCAGATGGTaGAGACCAAGAAAGAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKIHLLPFNLSDGEDQERQFVRW*RPRKNV Trigger: AACATTCTTTCTTGGTCTTCACCATCTGACAAATTG...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR TCA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCAAAAAAGGTCAGATACTaGTGCTTTATGCATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPKKVRY*CFMHAQ Trigger: CTGAGCATGCATAAAGCATCAGTATCTGACCTTTTT...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000318066.7 |
||
| CDS-3UTR TCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCGAAAGAACAGTTTTGTaGGGGGAGGAATTCGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CHSICQMVKTKKECSISFERTVL*GEEFVN Trigger: ATTGACGAATTCCTCCCCTCACAAAACTGTTCTTTC...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
||
| CDS-3UTR TCA 90 bp | GCCAGATCTTCAGATCATTCAAAAGTTACCCGAATTCTGGATTTTCATGCAAATGATGTTCATCTGGCCTaGATCCAAAAGTCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ARSSDHSKVTRILDFHANDVHLA*IQKSVQ Trigger: TTGGACAGACTTTTGGATTCAGGCCAGATGAACATC...ATTTGCATGAAAATCCAGAATTCGGGTAACTTTTGAATGATCTGAAGATCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCACTGATGCTTTATGCATaGTCAGGGCCAGTTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPLMLYA*SGPVYK Trigger: TTTATAAACTGGCCCTGAGCATGCATAAAGCATCAG...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCTATAATTCCCTAAGATaGGTGGCATGCCAAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: CHSICQMVKTKKECSISFYNSLR*VACQVA Trigger: AGCTACTTGGCATGCCACCCATCTTAGGGAATTATA...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | ACTAATTTTCTTAAAATCTGTAGCAGAAGCTTCTTGACTCCAAATTCCGTAGCCCACAAGCTAGATAGTTaGGATCTGCTCATCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TNFLKICSRSFLTPNSVAHKLDS*DLLIRF Trigger: AAACCTGATGAGCAGATCTCAACTATCTAGCTTGTG...GGCTACGGAATTTGGAGTCAAGAAGCTTCTGCTACAGATTTTAAGAAAATTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS-3UTR TCA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCACGGGCAGTAAATGTTaGTTTCTATTTCGTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: CHSICQMVKTKKECSISFTGSKC*FLFRFL Trigger: CAAGAAACGAAATAGAAATCAACATTTACTGCCCGT...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR GCA 90 bp | GCCAGATCTTCAGATCATTCAAAAGTTACCCGAATTCTGGATTTTCATGCAAATTCCATTACCTTAAACTaGAAGAGACAAGGTTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ARSSDHSKVTRILDFHANSITLN*KRQGCN Trigger: GTTGCAACCTTGTCTCTTGCAGTTTAAGGTAATGGA...ATTTGCATGAAAATCCAGAATTCGGGTAACTTTTGAATGATCTGAAGATCTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR TCA 90 bp | ACTAATTTTCTTAAAATCTGTAGCAGAAGCTTCTTGACTCCAAATTCCGTAGCCGCAAGAATCATTAACTaGGGACTTGATACTCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: TNFLKICSRSFLTPNSVAARIIN*GLDTLK Trigger: TTTGAGAGTATCAAGTCCTCAGTTAATGATTCTTGC...GGCTACGGAATTTGGAGTCAAGAAGCTTCTGCTACAGATTTTAAGAAAATTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS-3UTR TCA 90 bp | ACTAATTTTCTTAAAATCTGTAGCAGAAGCTTCTTGACTCCAAATTCCGTAGCCCAAATACTGGAGGGATaGAAGCAAGAATCATTAACT | + |
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Preference number: 4 (lower is better) Translates to: TNFLKICSRSFLTPNSVAQILEG*KQESLT Trigger: AGTTAATGATTCTTGCTTTCATCCCTCCAGTATTTG...GGCTACGGAATTTGGAGTCAAGAAGCTTCTGCTACAGATTTTAAGAAAATTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| 3UTR CAA 72 bp | TTGTATGCATATACAACATCATTTTATTCCAGAGACTaGAGCATCTGCGAATTTGGATATCCAAAGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LYAYTTSFYSRD*SICEFGYPKEV Trigger: GACTTCCTTTGGATATCCAAATTCGCAGATGCTCAAGTCTCTGGAATAAAATGATGTTGTATATGCATACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | GCTCTTAGGGTGTCTGCTACTCAGATCCTCTCAGTTAAGTCCCGTGCACAAAGGCAGAGTTACAACTATTaGTCTGTCCCCCTTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: ALRVSATQILSVKSRAQRQSYNY*SVPLPH Trigger: ATGGGGAAGGGGGACAGACAAATAGTTGTAACTCTG...CCTTTGTGCACGGGACTTAACTGAGAGGATCTGAGTAGCAGACACCCTAAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | TCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCGGCAAAATCCACCTCTaGCCATTCAATTTGTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SLPGLCRCCCSLCLEMFIGKIHL*PFNLSD Trigger: ATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC...GATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | AAAATGTGGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGAGGCAGGAGAATCGCTaGAACGCGGGAGGCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: KMWHNCESPTCQSQLLSLRQENR*NAGGRT Trigger: GGTTCTGCCTCCCGCGTTCAAGCGATTCTCCTGCCT...CAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCCACATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | TCTCTCCCAGGACTTTGCAGATGCTGCTGTTCCCTCTGCCTGGAGATGTTCATCTTTTATTCCAGAGACTaGAGCATCTGCGAATTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SLPGLCRCCCSLCLEMFIFYSRD*SICEFG Trigger: TCCAAATTCGCAGATGCTCAAGTCTCTGGAATAAAA...GATGAACATCTCCAGGCAGAGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | GGCACAACTGTGAAAGTCCTACATGTCAGTCACAACTGCTATCTTTGCTGTGACTGTAGCAGAAGCTTCTaGACTCCAAATTCCGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: GTTVKVLHVSHNCYLCCDCSRSF*TPNSVA Trigger: GGCTACGGAATTTGGAGTCAAGAAGCTTCTGCTACA...GTCACAGCAAAGATAGCAGTTGTGACTGACATGTAGGACTTTCACAGTTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS-3UTR CAA 90 bp | AGATGTTCATCTGGCCTGAATCCAAAAGTCTGTCCAAGTTACTTCTCTTTTCCATTCTCTCCCAGGACTTaGCAGATGCTGCTGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: RCSSGLNPKVCPSYFSFPFSPRT*QMLLFP Trigger: AGGGAACAGCAGCATCTGCAAAGTCCTGGGAGAGAA...TGGAAAAGAGAAGTAACTTGGACAGACTTTTGGATTCAGGCCAGATGAACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | TGCACAAAGGTGGGTCAGGTCTACTGTTGCCAGATCTTCAGATCATTCAAAAGTGTTTCATCCCACTGGTaGAGAAAGCAAGTCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: CTKVGQVYCCQIFRSFKSVSSHW*RKQVLA Trigger: TGCTAAGACTTGCTTTCTCAACCAGTGGGATGAAAC...ACTTTTGAATGATCTGAAGATCTGGCAACAGTAGACCTGACCCACCTTTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318066.7 |
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| CDS-3UTR CAA 90 bp | GGCAAAATCCACCTCTTGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGACTCTTGCCATTCAATTaGTCAGATGGTGAAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: GKIHLLPFNLSDGEDQERLLPFN*SDGEDQ Trigger: TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAG...TCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS TCA 90 bp | AAAAACAGGCCCAGAACTGCTTCACTTCCCTCCCACAGACCTCTCTaGTCTTTGTATAATGTTTACATTCTAAACATGGAATGCTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: KNRPRTASLPSHRPL*SLYNVYILNMECLR Trigger: TCTTAAGCATTCCATGTTTAGAATGTAAACATTATACAAAGATCAGAGAGGTCTGTGGGAGGGAAGTGAAGCAGTTCTGGGCCTGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS-3UTR CAA 90 bp | TGCCATTCAATTTGTCAGATGGTGAAGACCAAGAAAGAATGTTCCATCAGTTTCGGCAAAATCCACCTCTaGCCATTCAATTTGTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: CHSICQMVKTKKECSISFGKIHL*PFNLSD Trigger: ATCTGACAAATTGAATGGCAAGAGGTGGATTTTGCC...GAAACTGATGGAACATTCTTTCTTGGTCTTCACCATCTGACAAATTGAATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318066.7 ENST00000550657.1 |
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| CDS-3UTR CAA 90 bp | ACTAATTTTCTTAAAATCTGTAGCAGAAGCTTCTTGACTCCAAATTCCGTAGCCCTCTTGCCATTCAATTaGTCAGATGGTGAAGACCAA | + |
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Preference number: 5 (lower is better) Translates to: TNFLKICSRSFLTPNSVALLPFN*SDGEDQ Trigger: TTGGTCTTCACCATCTGACAAATTGAATGGCAAGAG...GGCTACGGAATTTGGAGTCAAGAAGCTTCTGCTACAGATTTTAAGAAAATTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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| CDS TCA 72 bp | CCCAGAACTGCTTCACTTCCCTCCCACAGACCTCTCTaGTCTTTGTATAATGTTTACATTCTAAACATGGAA | + |
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Preference number: 6 (lower is better) Translates to: PRTASLPSHRPL*SLYNVYILNME Trigger: TTCCATGTTTAGAATGTAAACATTATACAAAGATCAGAGAGGTCTGTGGGAGGGAAGTGAAGCAGTTCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000550657.1 |
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