Pregenerated sensors for UBE2M (Homo sapiens)
Ensembl gene IDs: ENSG00000130725Ensembl transcript IDs: ENST00000595957.5, ENST00000599829.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTGGGAGGAGGACACGGCAGCTGCGGTGACGGCGGGCGGGTACTaGAGGATCGTCTTCCGCGGCAGCAGCGGCTTTAGCGCGGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: GWEEDTAAAVTAGGY*RIVFRGSSGFSAEV Trigger: GACCTCCGCGCTAAAGCCGCTGCTGCCGCGGAAGACGATCCTCCAGTACCCGCCCGCCGTCACCGCAGCTGCCGTGTCCTCCTCCCACCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595957.5 |
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| CDS CCA 90 bp | CATCCTGTGGGGCCCGATGGGCAGAACATGTCTCCCTCCTCTCAGTaGGGACACCCTTGGTTTGCTCCTGGGAATTCAGCCATATGCACC | + |
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Preference number: 5 (lower is better) Translates to: HPVGPDGQNMSPSSQ*GHPWFAPGNSAICT Trigger: GGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTGCCCATCGGGCCCCACAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CCA 90 bp | CCCGATGGGCAGAACATGTCTCCCTCCTCTCAGTGGGGACACCCTTaGTTTGCTCCTGGGAATTCAGCCATATGCACCCTCACCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: PDGQNMSPSSQWGHP*FAPGNSAICTLTSS Trigger: TGATGAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTGCCCATCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS GCA 90 bp | TGGGCAGAACATGTCTCCCTCCTCTCAGTGGGGACACCCTTGGTTTaGTCCTGGGAATTCAGCCATATGCACCCTCACCTCATCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: WAEHVSLLSVGTPLV*SWEFSHMHPHLIRT Trigger: TGTCCTGATGAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CCA 90 bp | GAACATGTCTCCCTCCTCTCAGTGGGGACACCCTTGGTTTGCTCCTaGGAATTCAGCCATATGCACCCTCACCTCATCAGGACAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: EHVSLLSVGTPLVCS*EFSHMHPHLIRTDD Trigger: GTCATCTGTCCTGATGAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS GCA 72 bp | CCCGCTGCAGCTGCGGACTCGGGGCTCCCCCGACCGTaGCGTTTGGCCGCTCAGCTGATCCCTCCGCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PAAAADSGLPRP*RLAAQLIPPRG Trigger: CCCTCGCGGAGGGATCAGCTGAGCGGCCAAACGGCACGGTCGGGGGAGCCCCGAGTCCGCAGCTGCAGCGGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000595957.5 |
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| CDS CCA 72 bp | GAGGACACGGCAGCTGCGGTGACGGCGGGCGGGTACTaGAGGATCGTCTTCCGCGGCAGCAGCGGCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: EDTAAAVTAGGY*RIVFRGSSGFS Trigger: GCTAAAGCCGCTGCTGCCGCGGAAGACGATCCTCCAGTACCCGCCCGCCGTCACCGCAGCTGCCGTGTCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000595957.5 |
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| CDS CAA 90 bp | GCCCGATGGGCAGAACATGTCTCCCTCCTCTCAGTGGGGACACCCTaGGTTTGCTCCTGGGAATTCAGCCATATGCACCCTCACCTCATC | + |
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Preference number: 6 (lower is better) Translates to: ARWAEHVSLLSVGTP*VCSWEFSHMHPHLI Trigger: GATGAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTGCCCATCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS GCA 72 bp | CATGTCTCCCTCCTCTCAGTGGGGACACCCTTGGTTTaGTCCTGGGAATTCAGCCATATGCACCCTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: HVSLLSVGTPLV*SWEFSHMHPHL Trigger: GAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CCA 72 bp | TCCCTCCTCTCAGTGGGGACACCCTTGGTTTGCTCCTaGGAATTCAGCCATATGCACCCTCACCTCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLLSVGTPLVCS*EFSHMHPHLIR Trigger: CCTGATGAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CAA 90 bp | ATGGGCAGAACATGTCTCCCTCCTCTCAGTGGGGACACCCTTGGTTaGCTCCTGGGAATTCAGCCATATGCACCCTCACCTCATCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: MGRTCLPPLSGDTLG*LLGIQPYAPSPHQD Trigger: GTCCTGATGAGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CCA 72 bp | CAGAACATGTCTCCCTCCTCTCAGTGGGGACACCCTTaGTTTGCTCCTGGGAATTCAGCCATATGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: QNMSPSSQWGHP*FAPGNSAICTL Trigger: GAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CAA 72 bp | ACATGTCTCCCTCCTCTCAGTGGGGACACCCTTGGTTaGCTCCTGGGAATTCAGCCATATGCACCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: TCLPPLSGDTLG*LLGIQPYAPSP Trigger: AGGTGAGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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| CDS CAA 72 bp | GCAGAACATGTCTCCCTCCTCTCAGTGGGGACACCCTaGGTTTGCTCCTGGGAATTCAGCCATATGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: AEHVSLLSVGTP*VCSWEFSHMHP Trigger: AGGGTGCATATGGCTGAATTCCCAGGAGCAAACCAAGGGTGTCCCCACTGAGAGGAGGGAGACATGTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599829.1 |
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