Pregenerated sensors for UBE2E3 (Homo sapiens)
Ensembl gene IDs: ENSG00000170035Ensembl transcript IDs: ENST00000392415.6, ENST00000602291.5, ENST00000602475.5, ENST00000602479.5, ENST00000602499.5, ENST00000602632.1, ENST00000602710.5, ENST00000602837.1, ENST00000602959.5, ENST00000602970.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCGCGCTCCCGTGCGCGCTCTCCACACCTCCCCTCACCCTGGGGGTaGACGCGTCCGCCCGCGCGCGGCCAGGACAAAGAGCGCGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ARSRARSPHLPSPWG*TRPPARGQDKERGG Trigger: CCCGCCGCGCTCTTTGTCCTGGCCGCGCGCGGGCGGACGCGTGCACCCCCAGGGTGAGGGGAGGTGTGGAGAGCGCGCACGGGAGCGCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000392415.6 ENST00000602291.5 ENST00000602479.5 |
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| CDS CCA 90 bp | CTCTTGGAAAACTCGGCCGCCCGCCCGGCCCGCTCGCGCGCCGCCTaGGGGTGCACGCGTCCGCCCGCGCGCGGCCAGGACAAAGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LLENSAARPARSRAA*GCTRPPARGQDKER Trigger: GCGCTCTTTGTCCTGGCCGCGCGCGGGCGGACGCGTGCACCCCCAGGCGGCGCGCGAGCGGGCCGGGCGGGCGGCCGAGTTTTCCAAGAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602959.5 |
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| CDS CCA 90 bp | GTTCCCGCGCGCTCCCGTGCGCGCTCTCCACACCTCCCCTCACCCTaGGGGTGCACGCGTCCGCCCGCGCGCGGCCAGGACAAAGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: VPARSRARSPHLPSP*GCTRPPARGQDKER Trigger: GCGCTCTTTGTCCTGGCCGCGCGCGGGCGGACGCGTGCACCCCCAGGGTGAGGGGAGGTGTGGAGAGCGCGCACGGGAGCGCGCGGGAAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000392415.6 ENST00000602291.5 ENST00000602479.5 |
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| CDS GCA 90 bp | CCGGCCAAGACCGAGCTGCCACCCTGGGAAAAGCAGAATTCAAACTaGACCTTCTGCAAAGCTCCCAATGCCACCAAGGTTCCTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PAKTELPPWEKQNSN*TFCKAPNATKVPRS Trigger: TGAGCGAGGAACCTTGGTGGCATTGGGAGCTTTGCAGAAGGTGCAGTTTGAATTCTGCTTTTCCCAGGGTGGCAGCTCGGTCTTGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS CCA 90 bp | CGGCCAGCAGCGAAGATTCATCCGGCCAAGACCGAGCTGCCACCCTaGGAAAAGCAGAATTCAAACTGCACCTTCTGCAAAGCTCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: RPAAKIHPAKTELPP*EKQNSNCTFCKAPN Trigger: ATTGGGAGCTTTGCAGAAGGTGCAGTTTGAATTCTGCTTTTCCCAGGGTGGCAGCTCGGTCTTGGCCGGATGAATCTTCGCTGCTGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS GCA 90 bp | TGTTTCCACGGCCAGCAGCGAAGATTCATCCGGCCAAGACCGAGCTaGCACCCTGGGAAAAGCAGAATTCAAACTGCACCTTCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFHGQQRRFIRPRPS*HPGKSRIQTAPSAK Trigger: CTTTGCAGAAGGTGCAGTTTGAATTCTGCTTTTCCCAGGGTGGCAGCTCGGTCTTGGCCGGATGAATCTTCGCTGCTGGCCGTGGAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS GCA 90 bp | ACCGAGCTGCCACCCTGGGAAAAGCAGAATTCAAACTGCACCTTCTaGAAAGCTCCCAATGCCACCAAGGTTCCTCGCTCAATTTTTATA | + |
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Preference number: 5 (lower is better) Translates to: TELPPWEKQNSNCTF*KAPNATKVPRSIFI Trigger: TATAAAAATTGAGCGAGGAACCTTGGTGGCATTGGGAGCTTTGCAGAAGGTGCAGTTTGAATTCTGCTTTTCCCAGGGTGGCAGCTCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS GCA 90 bp | CTGGGAAAAGCAGAATTCAAACTGCACCTTCTGCAAAGCTCCCAATaGCACCAAGGTTCCTCGCTCAATTTTTATATCACGGACCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: LGKAEFKLHLLQSSQ*HQGSSLNFYITDRH Trigger: ATGTCGGTCCGTGATATAAAAATTGAGCGAGGAACCTTGGTGGCATTGGGAGCTTTGCAGAAGGTGCAGTTTGAATTCTGCTTTTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS GCA 90 bp | AGAGGAGGAATTCTGGAAGCTGGAATAAAGAATTTATATTTGTACTaGTGTGTGCTTAGCCTCTGGTTCTGGAAGACCTTTCCACCACAC | + |
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Preference number: 5 (lower is better) Translates to: RGGILEAGIKNLYLY*CVLSLWFWKTFPPH Trigger: GTGTGGTGGAAAGGTCTTCCAGAACCAGAGGCTAAGCACACAGCAGTACAAATATAAATTCTTTATTCCAGCTTCCAGAATTCCTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602837.1 ENST00000602970.1 |
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| CDS TCA 90 bp | GATAGGGAAGAAGAGACTGAAAGGACAAGTTCTTCATTCTCAATCTaGATGTCCTTACACTCTATGCAAGACTTGCTGATTTTCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: DREEETERTSSSFSI*MSLHSMQDLLIFLQ Trigger: TTGCAGGAAAATCAGCAAGTCTTGCATAGAGTGTAAGGACATTCAGATTGAGAATGAAGAACTTGTCCTTTCAGTCTCTTCTTCCCTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602475.5 |
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| CDS TCA 90 bp | GATAGGGAAGAAGAGACTGAAAGGACAAGTTCTTCATTCTCAATCTaGATGTCCTTACACTCTATGCAAGACTTGCTGATTTTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DREEETERTSSSFSI*MSLHSMQDLLIFLS Trigger: AGAAAGGAAAATCAGCAAGTCTTGCATAGAGTGTAAGGACATTCAGATTGAGAATGAAGAACTTGTCCTTTCAGTCTCTTCTTCCCTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602632.1 |
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| CDS CCA 72 bp | CGCTCCCGTGCGCGCTCTCCACACCTCCCCTCACCCTaGGGGTGCACGCGTCCGCCCGCGCGCGGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: RSRARSPHLPSP*GCTRPPARGQD Trigger: GTCCTGGCCGCGCGCGGGCGGACGCGTGCACCCCCAGGGTGAGGGGAGGTGTGGAGAGCGCGCACGGGAGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000392415.6 ENST00000602291.5 ENST00000602479.5 |
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| CDS GCA 72 bp | CGTGCGCGCTCTCCACACCTCCCCTCACCCTGGGGGTaGACGCGTCCGCCCGCGCGCGGCCAGGACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RARSPHLPSPWG*TRPPARGQDKE Trigger: CTCTTTGTCCTGGCCGCGCGCGGGCGGACGCGTGCACCCCCAGGGTGAGGGGAGGTGTGGAGAGCGCGCACG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000392415.6 ENST00000602291.5 ENST00000602479.5 |
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| CDS GCA 72 bp | GGCCAGCAGCGAAGATTCATCCGGCCAAGACCGAGCTaGCACCCTGGGAAAAGCAGAATTCAAACTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: GQQRRFIRPRPS*HPGKSRIQTAP Trigger: AGGTGCAGTTTGAATTCTGCTTTTCCCAGGGTGGCAGCTCGGTCTTGGCCGGATGAATCTTCGCTGCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS GCA 72 bp | ACCGAGCTGCCACCCTGGGAAAAGCAGAATTCAAACTaGACCTTCTGCAAAGCTCCCAATGCCACCAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TELPPWEKQNSN*TFCKAPNATKV Trigger: AACCTTGGTGGCATTGGGAGCTTTGCAGAAGGTGCAGTTTGAATTCTGCTTTTCCCAGGGTGGCAGCTCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602710.5 |
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| CDS CCA 72 bp | TTATATTTGTACTGCTGTGTGCTTAGCCTCTGGTTCTaGAAGACCTTTCCACCACACCTCTTTTTGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LYLYCCVLSLWF*KTFPPHLFLGS Trigger: ACTCCCCAAAAAGAGGTGTGGTGGAAAGGTCTTCCAGAACCAGAGGCTAAGCACACAGCAGTACAAATATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602837.1 |
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| CDS TCA 72 bp | TCTTTACACCACTGTTTAATTGCTTCATTATTCCAGTaGGCAGGCAAGGCTGAAGAGGAGGAATTCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLHHCLIASLFQ*AGKAEEEEFWK Trigger: CTTCCAGAATTCCTCCTCTTCAGCCTTGCCTGCTCACTGGAATAATGAAGCAATTAAACAGTGGTGTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602837.1 ENST00000602970.1 |
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| CDS GCA 72 bp | AAGTTATCTCTTGGAAAACTTCTGCAAAGCTCCCAATaGCACCAAGGTTCCTCGCTCAATTTTTATATCACG | + |
|
Preference number: 6 (lower is better) Translates to: KLSLGKLLQSSQ*HQGSSLNFYIT Trigger: CGTGATATAAAAATTGAGCGAGGAACCTTGGTGGCATTGGGAGCTTTGCAGAAGTTTTCCAAGAGATAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602499.5 |
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| CDS CCA 72 bp | AAGAATTTATATTTGTACTGCTGTGTGCTTAGCCTCTaGTTCTGGAAGACCTTTCCACCACACCTCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: KNLYLYCCVLSL*FWKTFPPHLFL Trigger: CAAAAAGAGGTGTGGTGGAAAGGTCTTCCAGAACCAGAGGCTAAGCACACAGCAGTACAAATATAAATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000602837.1 |
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| CDS CCA 72 bp | AAGAATTTATATTTGTACTGCTGTGTGCTTAGCCTCTaGTTCTGGAAGACCTTTCCACCACACCTTTATTTC | + |
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Preference number: 6 (lower is better) Translates to: KNLYLYCCVLSL*FWKTFPPHLYF Trigger: GAAATAAAGGTGTGGTGGAAAGGTCTTCCAGAACCAGAGGCTAAGCACACAGCAGTACAAATATAAATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602970.1 |
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| CDS TCA 72 bp | GAAGAGACTGAAAGGACAAGTTCTTCATTCTCAATCTaGATGTCCTTACACTCTATGCAAGACTTGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: EETERTSSSFSI*MSLHSMQDLLI Trigger: AATCAGCAAGTCTTGCATAGAGTGTAAGGACATTCAGATTGAGAATGAAGAACTTGTCCTTTCAGTCTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602475.5 ENST00000602632.1 |
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| CDS GCA 72 bp | ATTCTGGAAGCTGGAATAAAGAATTTATATTTGTACTaGTGTGTGCTTAGCCTCTGGTTCTGGAAGACCTTT | + |
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Preference number: 6 (lower is better) Translates to: ILEAGIKNLYLY*CVLSLWFWKTF Trigger: AAAGGTCTTCCAGAACCAGAGGCTAAGCACACAGCAGTACAAATATAAATTCTTTATTCCAGCTTCCAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000602837.1 ENST00000602970.1 |
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