Pregenerated sensors for UBE2E1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170142Ensembl transcript IDs: ENST00000306627.8, ENST00000346855.7, ENST00000424381.5, ENST00000442670.5, ENST00000452012.1, ENST00000475680.5, ENST00000481622.1, ENST00000484048.1, ENST00000493707.1, ENST00000495141.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACCAGACTACAAGCAACTaGACCCAAATGTCTAAATGT | + |
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Preference number: 2 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYQTTSN*TQMSKC Trigger: ACATTTAGACATTTGGGTTCAGTTGCTTGTAGTCTG...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| 3UTR-3UTR TCA 90 bp | CAATTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCCAGACTACAAGCAACTaGACCCAAATGTCTAAATGT | + |
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Preference number: 2 (lower is better) Translates to: QFIHDGTHFSCTCYYSICQTTSN*TQMSKC Trigger: ACATTTAGACATTTGGGTTCAGTTGCTTGTAGTCTG...GCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATCAGACTACAAGCAACTaGACCCAAATGTCTAAATGT | + |
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Preference number: 2 (lower is better) Translates to: NADLSSPQHRTNPLSNSYQTTSN*TQMSKC Trigger: ACATTTAGACATTTGGGTTCAGTTGCTTGTAGTCTG...ATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| 3UTR-3UTR CCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTTACTCATCTCTTATATaGTGTTTTATAGCCACGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLFHALQLVNSLRYFTTGYSSLI*CFIATC Trigger: ACACGTGGCTATAAAACACCATATAAGAGATGAGTA...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| 3UTR-3UTR TCA 90 bp | AATAAAACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTCAGACTACAAGCAACTaGACCCAAATGTCTAAATGT | + |
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Preference number: 2 (lower is better) Translates to: NKTHYSSLIWCFIATCPFQTTSN*TQMSKC Trigger: ACATTTAGACATTTGGGTTCAGTTGCTTGTAGTCTG...AAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| 3UTR-3UTR CCA 90 bp | CTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTTTTTACTCATCTCTTATATaGTGTTTTATAGCCACGTGT | + |
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Preference number: 2 (lower is better) Translates to: LFHALQLVNSLRYFTTGFYSSLI*CFIATC Trigger: ACACGTGGCTATAAAACACCATATAAGAGATGAGTA...AAAACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| 3UTR GCA 72 bp | CAATTTATCCATGACGGAACCCATTTCTCATGTACTTaGTACTACAGCATCTGCAAGTCAGAAAATGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: QFIHDGTHFSCT*YYSICKSENAF Trigger: AAAAGCATTTTCTGACTTGCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | TCTTTACCAACTCCCACCCTCCCTGACCCCTTCAAAATCATAAGCAGCTCTCTTCCCTCTCTTTGTGTCTaGCTCCTCCGTGCCGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPTPTLPDPFKIISSSLPSLCV*LLRAAA Trigger: CGCGGCGGCACGGAGGAGCCAGACACAAAGAGAGGG...AAGAGAGCTGCTTATGATTTTGAAGGGGTCAGGGAGGGTGGGAGTTGGTAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | CAATTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCTGCTGCGGCTGCGGCTaGGCCTGGCCACTCGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFIHDGTHFSCTCYYSICCCGCG*AWPLVS Trigger: AGACACGAGTGGCCAGGCCCAGCCGCAGCCGCAGCA...GCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACTGGGACCAGCACTCTTaGCGCTGGTGGAGAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYWDQHS*RWWRGV Trigger: AACTCCTCTCCACCAGCGCCAAGAGTGCTGGTCCCA...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346855.7 |
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| CDS-3UTR TCA 90 bp | CCTAAGGCAGGGTACCAATTTATCCATGACGGAACCCATTTCTCATGTACTTGCGTGGAGGGTCTAAAGTaGTGTCCGCCAGCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PKAGYQFIHDGTHFSCTCVEGLK*CPPAPS Trigger: AGAAGGAGCTGGCGGACATCACTTTAGACCCTCCAC...GCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTGGTACCCTGCCTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR GCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACGCTCCTTCTGAATTCTaGTTTTCCCCGGGCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYAPSEF*FSPGVL Trigger: GAGGACGCCCGGGGAAAAGCAGAATTCAGAAGGAGC...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424381.5 |
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| CDS-3UTR CCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACGTGTCTCTCTCTCGCTaGGAGAGAAGCGGAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYVSLSR*ERSGSA Trigger: TGCACTTCCGCTTCTCTCCCAGCGAGAGAGAGACAC...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | CAATTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCAGGAGGAGCTGGTGCTaGCCCTCGAATCGTCATCCG | + |
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Preference number: 4 (lower is better) Translates to: QFIHDGTHFSCTCYYSICRRSWC*PSNRHP Trigger: CGGATGACGATTCGAGGGCCAGCACCAGCTCCTCCT...GCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | CTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTTTTGGCTGCGGCTGGGCCTaGCCACTCGTGTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFHALQLVNSLRYFTTGFGCGWA*PLVSLS Trigger: AGAGAGAGACACGAGTGGCCAGGCCCAGCCGCAGCC...AAAACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | TATGTAGTCTTAGAGGGACTTTACATAAATGGCCATATGTGTAACCTGTACCAAGGCTGCGGCTGGGCCTaGCCACTCGTGTCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YVVLEGLYINGHMCNLYQGCGWA*PLVSLS Trigger: AGAGAGAGACACGAGTGGCCAGGCCCAGCCGCAGCC...TTGGTACAGGTTACACATATGGCCATTTATGTAAAGTCCCTCTAAGACTACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTAGGAGGAGCTGGTGCTaGCCCTCGAATCGTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGRRSWC*PSNRHP Trigger: CGGATGACGATTCGAGGGCCAGCACCAGCTCCTCCT...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | TCTTTACCAACTCCCACCCTCCCTGACCCCTTCAAAATCATAAGCAGCTCTCTTTCTCGGTTTGCTGGTTaGAAGACGAAGATGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLPTPTLPDPFKIISSSLSRFAG*KTKMRR Trigger: CCTCCTCATCTTCGTCTTCCAACCAGCAAACCGAGA...AAGAGAGCTGCTTATGATTTTGAAGGGGTCAGGGAGGGTGGGAGTTGGTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR TCA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCTCCGCCAGCTCCTTCTaGATTCTGCTTTTCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LNNICYRNTLLFTNSHPPSASSF*ILLFPG Trigger: CCCGGGGAAAAGCAGAATTCAGAAGGAGCTGGCGGA...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424381.5 |
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| CDS-3UTR CCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACTCTCGGTTTGCTGGTTaGAAGACGAAGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYSRFAG*KTKMRR Trigger: CCTCCTCATCTTCGTCTTCCAACCAGCAAACCGAGA...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR TCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTGTGGAGGGTCTAAAGTaGTGTCCGCCAGCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGVEGLK*CPPAPS Trigger: AGAAGGAGCTGGCGGACATCACTTTAGACCCTCCAC...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306627.8 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR TCA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCGTGGAGGGTCTAAAGTaGTGTCCGCCAGCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LNNICYRNTLLFTNSHPPVEGLK*CPPAPS Trigger: AGAAGGAGCTGGCGGACATCACTTTAGACCCTCCAC...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306627.8 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR CCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTGTGTCTCTCTCTCGCTaGGAGAGAAGCGGAAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGVSLSR*ERSGSA Trigger: TGCACTTCCGCTTCTCTCCCAGCGAGAGAGAGACAC...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | TCTTTACCAACTCCCACCCTCCCTGACCCCTTCAAAATCATAAGCAGCTCTCTTTCTTTCTCGGTTTGCTaGTTGGAAGACGAAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SLPTPTLPDPFKIISSSLSFSVC*LEDEDE Trigger: CTCATCTTCGTCTTCCAACCAGCAAACCGAGAAAGA...AAGAGAGCTGCTTATGATTTTGAAGGGGTCAGGGAGGGTGGGAGTTGGTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACTTCTCTTGGCGCTGGTaGAGAGGAGTTTGGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYFSWRW*RGVWSF Trigger: AAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGAA...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | TTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCAAGCCTTCTGAATTCTCTTaGCGCTGGTGGAGAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: FIHDGTHFSCTCYYSICKPSEFS*RWWRGV Trigger: AACTCCTCTCCACCAGCGCCAAGAGAATTCAGAAGG...CTTGCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | TCTTTACCAACTCCCACCCTCCCTGACCCCTTCAAAATCATAAGCAGCTCTCTTCCGAAATGTAACCTTTaGAGGCTTGAAGGGATATTC | + |
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Preference number: 4 (lower is better) Translates to: SLPTPTLPDPFKIISSSLPKCNL*RLEGIF Trigger: GAATATCCCTTCAAGCCTCCAAAGGTTACATTTCGG...AAGAGAGCTGCTTATGATTTTGAAGGGGTCAGGGAGGGTGGGAGTTGGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 |
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| CDS-3UTR CCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACTGGTCATATACTGAGTaGCAATACTTCCCACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYWSYTE*QYFPPR Trigger: CCTTGGTGGGAAGTATTGCCACTCAGTATATGACCA...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR GCA 90 bp | CTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTTTTATGAGGAGGAGCTGGTaGTGGCCCTCGAATCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LFHALQLVNSLRYFTTGFMRRSW*WPSNRH Trigger: ATGACGATTCGAGGGCCAGCACCAGCTCCTCCTCAT...AAAACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTCACTCTTGGCGCTGGTaGAGAGGAGTTTGGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGHSWRW*RGVWSF Trigger: AAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGTG...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000346855.7 |
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| CDS-3UTR TCA 90 bp | AATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATATAGAACCAATCCACTaGGCAACTCCTATTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: NADLSSPQHRTNPLSNSYIEPIH*ATPIPR Trigger: GCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTAT...ATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR TCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTATAGAACCAATCCACTaGGCAACTCCTATTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGIEPIH*ATPIPR Trigger: GCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTAT...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR CCA 90 bp | TCTTTACCAACTCCCACCCTCCCTGACCCCTTCAAAATCATAAGCAGCTCTCTTCTTGAAGGGATATTCTaGTGTAAAAGTGATATCGAG | + |
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Preference number: 4 (lower is better) Translates to: SLPTPTLPDPFKIISSSLLEGIF*CKSDIE Trigger: CTCGATATCACTTTTACACCAGAATATCCCTTCAAG...AAGAGAGCTGCTTATGATTTTGAAGGGGTCAGGGAGGGTGGGAGTTGGTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR TCA 90 bp | AGATACCTATCGATTTCAGAAGAATCTGCGAATGGCAACCAAAAGGCAAAAGAAATAGAACCAATCCACTaGGCAACTCCTATTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: RYLSISEESANGNQKAKEIEPIH*ATPIPR Trigger: GCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTAT...TTCTTTTGCCTTTTGGTTGCCATTCGCAGATTCTTCTGAAATCGATAGGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCTGGTCATATACTGAGTaGCAATACTTCCCACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LNNICYRNTLLFTNSHPPWSYTE*QYFPPR Trigger: CCTTGGTGGGAAGTATTGCCACTCAGTATATGACCA...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR CCA 90 bp | AACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTATATAGATGTTATCGCCTTTaGGACCAGCACTCTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: NALLISYMVFYSHVSILYRCYRL*DQHSWR Trigger: GCGCCAAGAGTGCTGGTCCCAAAGGCGATAACATCT...ATATAAAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346855.7 |
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| CDS-3UTR TCA 90 bp | TATGTAGTCTTAGAGGGACTTTACATAAATGGCCATATGTGTAACCTGTACCAAATAGAACCAATCCACTaGGCAACTCCTATTCCACGC | + |
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Preference number: 4 (lower is better) Translates to: YVVLEGLYINGHMCNLYQIEPIH*ATPIPR Trigger: GCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTAT...TTGGTACAGGTTACACATATGGCCATTTATGTAAAGTCCCTCTAAGACTACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR GCA 90 bp | AATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATGTTTCTTTCTCGGTTTaGTGGTTGGAAGACGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NADLSSPQHRTNPLSNSYVSFSV*WLEDED Trigger: ATCTTCGTCTTCCAACCAGCAAACCGAGAAAGAAAC...ATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR GCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTGATTTCAGAAGAATCTaGGAATGGCAACCAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGDFRRI*EWQPKG Trigger: GCCTTTTGGTTGCCATTCGCAGATTCTTCTGAAATC...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | CTCCTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTCCGAAATGTAACCTTTaGAGGCTTGAAGGGATATTC | + |
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Preference number: 4 (lower is better) Translates to: LLFHALQLVNSLRYFTTGPKCNL*RLEGIF Trigger: GAATATCCCTTCAAGCCTCCAAAGGTTACATTTCGG...ACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 |
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| CDS-3UTR CCA 90 bp | AGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTCCACGCCTTACTACTCATCTCTTATATaGTGTTTTATAGCCACGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSPQHRTNPLSNSYSTPYYSSLI*CFIATC Trigger: ACACGTGGCTATAAAACACCATATAAGAGATGAGTA...GTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
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| CDS-3UTR TCA 90 bp | TATGTAGTCTTAGAGGGACTTTACATAAATGGCCATATGTGTAACCTGTACCAAAGTAGGGTTCGTCTTTaGAGCCTAAATGGGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVVLEGLYINGHMCNLYQSRVRL*SLNGVD Trigger: ATCTACCCCATTTAGGCTTCAAAGACGAACCCTACT...TTGGTACAGGTTACACATATGGCCATTTATGTAAAGTCCCTCTAAGACTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306627.8 |
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| CDS-3UTR CCA 90 bp | CTATTCCACGCCTTACAGTTAGTTAACAGCTTAAGGTATTTCACTACAGGTTTTTCTTTCTCGGTTTGCTaGTTGGAAGACGAAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LFHALQLVNSLRYFTTGFSFSVC*LEDEDE Trigger: CTCATCTTCGTCTTCCAACCAGCAAACCGAGAAAGA...AAAACCTGTAGTGAAATACCTTAAGCTGTTAACTAACTGTAAGGCGTGGAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
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| CDS-3UTR CCA 90 bp | TTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCAAGCTTGAAGGGATATTCTaGTGTAAAAGTGATATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIHDGTHFSCTCYYSICKLEGIF*CKSDIE Trigger: CTCGATATCACTTTTACACCAGAATATCCCTTCAAG...CTTGCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR TCA 90 bp | TATGTAGTCTTAGAGGGACTTTACATAAATGGCCATATGTGTAACCTGTACCAAGTACCAATTTATCCATaGCGGAACCCATTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YVVLEGLYINGHMCNLYQVPIYP*RNPFLM Trigger: CATGAGAAATGGGTTCCGTCATGGATAAATTGGTAC...TTGGTACAGGTTACACATATGGCCATTTATGTAAAGTCCCTCTAAGACTACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR GCA 90 bp | TATGTAGTCTTAGAGGGACTTTACATAAATGGCCATATGTGTAACCTGTACCAAGTTTCTTTCTCGGTTTaGTGGTTGGAAGACGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVVLEGLYINGHMCNLYQVSFSV*WLEDED Trigger: ATCTTCGTCTTCCAACCAGCAAACCGAGAAAGAAAC...TTGGTACAGGTTACACATATGGCCATTTATGTAAAGTCCCTCTAAGACTACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
||
| CDS-3UTR CCA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCCTTGAAGGGATATTCTaGTGTAAAAGTGATATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNNICYRNTLLFTNSHPPLEGIF*CKSDIE Trigger: CTCGATATCACTTTTACACCAGAATATCCCTTCAAG...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR CCA 90 bp | AACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTATATTGGTCATATACTGAGTaGCAATACTTCCCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NALLISYMVFYSHVSILYWSYTE*QYFPPR Trigger: CCTTGGTGGGAAGTATTGCCACTCAGTATATGACCA...ATATAAAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR CCA 90 bp | AATAAAACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTGGTCATATACTGAGTaGCAATACTTCCCACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKTHYSSLIWCFIATCPFWSYTE*QYFPPR Trigger: CCTTGGTGGGAAGTATTGCCACTCAGTATATGACCA...AAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR TCA 90 bp | TATGTAGTCTTAGAGGGACTTTACATAAATGGCCATATGTGTAACCTGTACCAACAGACTACAAGCAACTaGACCCAAATGTCTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YVVLEGLYINGHMCNLYQQTTSN*TQMSKC Trigger: ACATTTAGACATTTGGGTTCAGTTGCTTGTAGTCTG...TTGGTACAGGTTACACATATGGCCATTTATGTAAAGTCCCTCTAAGACTACATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR CCA 90 bp | AATAAAACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTCCGAAATGTAACCTTTaGAGGCTTGAAGGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: NKTHYSSLIWCFIATCPFPKCNL*RLEGIF Trigger: GAATATCCCTTCAAGCCTCCAAAGGTTACATTTCGG...AAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 |
||
| CDS-3UTR CCA 90 bp | AATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATTACTCATCTCTTATATaGTGTTTTATAGCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NADLSSPQHRTNPLSNSYYSSLI*CFIATC Trigger: ACACGTGGCTATAAAACACCATATAAGAGATGAGTA...ATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR CCA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCTACTCATCTCTTATATaGTGTTTTATAGCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNNICYRNTLLFTNSHPPYSSLI*CFIATC Trigger: ACACGTGGCTATAAAACACCATATAAGAGATGAGTA...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR CCA 90 bp | AACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTATATCTTGAAGGGATATTCTaGTGTAAAAGTGATATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NALLISYMVFYSHVSILYLEGIF*CKSDIE Trigger: CTCGATATCACTTTTACACCAGAATATCCCTTCAAG...ATATAAAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS-3UTR CCA 90 bp | AATAAAACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTACTCATCTCTTATATaGTGTTTTATAGCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKTHYSSLIWCFIATCPFYSSLI*CFIATC Trigger: ACACGTGGCTATAAAACACCATATAAGAGATGAGTA...AAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTTTTATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000306627.8 ENST00000346855.7 ENST00000424381.5 ENST00000452012.1 |
||
| CDS TCA 90 bp | AGGTCCGAGGCCTCGCTCAACACCCGACCCGCCCGGAGTCCTCAGTaGCGAAGCCAACATGGCCGCTCCCCACGAGGCCCCTCGGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSEASLNTRPARSPQ*RSQHGRSPRGPSGP Trigger: CGGGCCCGAGGGGCCTCGTGGGGAGCGGCCATGTTGGCTTCGTCACTGAGGACTCCGGGCGGGTCGGGTGTTGAGCGAGGCCTCGGACCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475680.5 |
||
| CDS TCA 90 bp | CAGAGTAGATGTCAGGTTCCAGGAAAACCGCACAGGGCTAATCAGTaGGGGTCAGTCAGGCCTCCTGAGAAGCTGTACAATCAAACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSRCQVPGKPHRANQ*GSVRPPEKLYNQTK Trigger: TTTGGTTTGATTGTACAGCTTCTCAGGAGGCCTGACTGACCCTCACTGATTAGCCCTGTGCGGTTTTCCTGGAACCTGACATCTACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481622.1 |
||
| CDS TCA 90 bp | CATTCTAGTTCACAGTGGCACTGGGAGGTCCAGCAGTCATTAGAATaGCCTGCACTGAAATGTGAGGTCAACCCCTGCCTGAGGATACAA | + |
|
Preference number: 5 (lower is better) Translates to: HSSSQWHWEVQQSLE*PALKCEVNPCLRIQ Trigger: TTGTATCCTCAGGCAGGGGTTGACCTCACATTTCAGTGCAGGTCATTCTAATGACTGCTGGACCTCCCAGTGCCACTGTGAACTAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493707.1 |
||
| CDS CCA 90 bp | GTTATCGCCTTTGGGACCAGCATTTCTCCAGCTCAGAAGTTAGGTTaGTCCCACAGTCCAGGAATTCAGATCCACTTCACTCTATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VIAFGTSISPAQKLG*SHSPGIQIHFTLFH Trigger: ATGGAATAGAGTGAAGTGGATCTGAATTCCTGGACTGTGGGACCAACCTAACTTCTGAGCTGGAGAAATGCTGGTCCCAAAGGCGATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493707.1 |
||
| CDS-3UTR CAA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCAAACAGCCCCTCTCTTaGTGTCTGGCTCCTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LNNICYRNTLLFTNSHPPKQPLS*CLAPPC Trigger: GCACGGAGGAGCCAGACACAAAGAGAGGGGCTGTTT...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
||
| CDS-3UTR CAA 90 bp | AGATACCTATCGATTTCAGAAGAATCTGCGAATGGCAACCAAAAGGCAAAAGAAAAACAGCCCCTCTCTTaGTGTCTGGCTCCTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RYLSISEESANGNQKAKEKQPLS*CLAPPC Trigger: GCACGGAGGAGCCAGACACAAAGAGAGGGGCTGTTT...TTCTTTTGCCTTTTGGTTGCCATTCGCAGATTCTTCTGAAATCGATAGGTATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR CAA 90 bp | AACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTATATTTGGGACCAGCACTCTaGGCGCTGGTGGAGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NALLISYMVFYSHVSILYLGPAL*ALVERS Trigger: ACTCCTCTCCACCAGCGCCAAGAGTGCTGGTCCCAA...ATATAAAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000346855.7 |
||
| CDS-3UTR CAA 90 bp | CTGAATAATATCTGTTATAGAAATACCCTACTCTTTACCAACTCCCACCCTCCCCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNNICYRNTLLFTNSHPPLVERS*EFLLML Trigger: CAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAG...GGGAGGGTGGGAGTTGGTAAAGAGTAGGGTATTTCTATAACAGATATTATTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
||
| CDS-3UTR CAA 90 bp | CAATTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCTTACTCTCCTTCTTCTaGGGGGTGTTTGTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QFIHDGTHFSCTCYYSICLLSFF*GVFVSF Trigger: GAAAGAAACAAACACCCCCAAGAAGAAGGAGAGTAA...GCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR CAA 90 bp | CAATTTATCCATGACGGAACCCATTTCTCATGTACTTGCTACTACAGCATCTGCAGGAGTTTGGAGTTTTaGCTCATGCTGACTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: QFIHDGTHFSCTCYYSICRSLEF*LMLTLL Trigger: GAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCT...GCAGATGCTGTAGTAGCAAGTACATGAGAAATGGGTTCCGTCATGGATAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR CAA 90 bp | AGATACCTATCGATTTCAGAAGAATCTGCGAATGGCAACCAAAAGGCAAAAGAATGTTTCTTTCTCGGTTaGCTGGTTGGAAGACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RYLSISEESANGNQKAKECFFLG*LVGRRR Trigger: TCTTCGTCTTCCAACCAGCAAACCGAGAAAGAAACA...TTCTTTTGCCTTTTGGTTGCCATTCGCAGATTCTTCTGAAATCGATAGGTATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR CAA 90 bp | AATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATAGGAGTTTGGAGTTTTaGCTCATGCTGACTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: NADLSSPQHRTNPLSNSYRSLEF*LMLTLL Trigger: GAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCT...ATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
||
| CDS-3UTR CAA 90 bp | AACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTATATCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NALLISYMVFYSHVSILYLVERS*EFLLML Trigger: CAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAG...ATATAAAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
||
| CDS-3UTR CAA 90 bp | AATGCAGACTTAAGTAGTCCACAACATAGAACCAATCCACTGAGCAACTCCTATCCATTTCTCATGTACTaGCTACTACAGCATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NADLSSPQHRTNPLSNSYPFLMY*LLQHLQ Trigger: TTGCAGATGCTGTAGTAGCAAGTACATGAGAAATGG...ATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGGACTACTTAAGTCTGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306627.8 |
||
| CDS-3UTR CAA 90 bp | AACGCACTACTCATCTCTTATATGGTGTTTTATAGCCACGTGTCCATTTTATATTGTTTCTTTCTCGGTTaGCTGGTTGGAAGACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NALLISYMVFYSHVSILYCFFLG*LVGRRR Trigger: TCTTCGTCTTCCAACCAGCAAACCGAGAAAGAAACA...ATATAAAATGGACACGTGGCTATAAAACACCATATAAGAGATGAGTAGTGCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306627.8 ENST00000346855.7 |
||
| CDS TCA 72 bp | GCCTCGCTCAACACCCGACCCGCCCGGAGTCCTCAGTaGCGAAGCCAACATGGCCGCTCCCCACGAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLNTRPARSPQ*RSQHGRSPRGP Trigger: GGGGCCTCGTGGGGAGCGGCCATGTTGGCTTCGTCACTGAGGACTCCGGGCGGGTCGGGTGTTGAGCGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475680.5 |
||
| CDS GCA 72 bp | ACAAACCATGCAGCCAGTGTAAATAAGGAACTCGGGTaGTGTCAGGAGGGCATTGACCAGGGGCGCACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: TNHAASVNKELG*CQEGIDQGRTR Trigger: CCGCGTGCGCCCCTGGTCAATGCCCTCCTGACAGCACCCGAGTTCCTTATTTACACTGGCTGCATGGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442670.5 |
||
| CDS TCA 72 bp | TCACAGTGGCACTGGGAGGTCCAGCAGTCATTAGAATaGCCTGCACTGAAATGTGAGGTCAACCCCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQWHWEVQQSLE*PALKCEVNPCL Trigger: CAGGCAGGGGTTGACCTCACATTTCAGTGCAGGTCATTCTAATGACTGCTGGACCTCCCAGTGCCACTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493707.1 |
||
| CDS CAA 90 bp | TTATCGCCTTTGGGACCAGCACTCTTGGCGCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTGACTTTACTCTCCTTCTTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPLGPALLALVERS*EFLLMLTLLSFFLG Trigger: CCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGTGCTGGTCCCAAAGGCGATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000346855.7 |
||
| CDS GCA 72 bp | CCCCTGCCTGAGGATACAATATCACCCACTGCTCAATaGTCTGTGAAGCTGAGGCCTCTGCAACTTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLPEDTISPTAQ*SVKLRPLQLLC Trigger: ACAAAGAAGTTGCAGAGGCCTCAGCTTCACAGAGCATTGAGCAGTGGGTGATATTGTATCCTCAGGCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493707.1 |
||
| CDS CAA 72 bp | TTGGGACCAGCACTCTTGGCGCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTGACTTTACTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGPALLALVERS*EFLLMLTLLSF Trigger: GAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGTGCTGGTCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000346855.7 |
||
| CDS CAA 90 bp | TTGGGACCAGCACTCTTGGCGCTGGTGGAGAGGAGTTTGGAGTTTTaGCTCATGCTGACTTTACTCTCCTTCTTCTTGGGGGTGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGPALLALVERSLEF*LMLTLLSFFLGVFV Trigger: AACAAACACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGTGCTGGTCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000346855.7 |
||
| CDS CCA 72 bp | CACATAAACCATGAGGAGCGTTTAAGCTATCCTCATTaGGAGGCAGACCAAATGCAGCAAGAGGCAGTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: HINHEERLSYPH*EADQMQQEAVR Trigger: CCGAACTGCCTCTTGCTGCATTTGGTCTGCCTCCCAATGAGGATAGCTTAAACGCTCCTCATGGTTTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484048.1 |
||
| CDS CAA 72 bp | AGAGCACAGTACCTCTTGGCGCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTGACTTTACTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAQYLLALVERS*EFLLMLTLLSF Trigger: GAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGGTACTGTGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484048.1 |
||
| CDS CAA 90 bp | AGAGCACAGTACCTCTTGGCGCTGGTGGAGAGGAGTTTGGAGTTTTaGCTCATGCTGACTTTACTCTCCTTCTTCTTGGGGGTGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RAQYLLALVERSLEF*LMLTLLSFFLGVFV Trigger: AACAAACACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGGTACTGTGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484048.1 |
||
| CDS CCA 72 bp | TTTGGGACCAGCATTTCTCCAGCTCAGAAGTTAGGTTaGTCCCACAGTCCAGGAATTCAGATCCACTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: FGTSISPAQKLG*SHSPGIQIHFT Trigger: AGTGAAGTGGATCTGAATTCCTGGACTGTGGGACCAACCTAACTTCTGAGCTGGAGAAATGCTGGTCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493707.1 |
||
| CDS CAA 90 bp | AGCTGTACAATCAAACCAAACCTCTTGGCGCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTGACTTTACTCTCCTTCTTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCTIKPNLLALVERS*EFLLMLTLLSFFLG Trigger: CCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGGTTTGGTTTGATTGTACAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481622.1 |
||
| CDS CAA 90 bp | TGTTATCGCCTTTGGGACCAGCATTTCTCCAGCTCAGAAGTTAGGTaGGTCCCACAGTCCAGGAATTCAGATCCACTTCACTCTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CYRLWDQHFSSSEVR*VPQSRNSDPLHSIP Trigger: TGGAATAGAGTGAAGTGGATCTGAATTCCTGGACTGTGGGACCAACCTAACTTCTGAGCTGGAGAAATGCTGGTCCCAAAGGCGATAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493707.1 |
||
| CDS CAA 90 bp | ATCAAACCAAACCTCTTGGCGCTGGTGGAGAGGAGTTTGGAGTTTTaGCTCATGCTGACTTTACTCTCCTTCTTCTTGGGGGTGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: IKPNLLALVERSLEF*LMLTLLSFFLGVFV Trigger: AACAAACACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGGTTTGGTTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481622.1 |
||
| CDS CAA 72 bp | ATCAAACCAAACCTCTTGGCGCTGGTGGAGAGGAGTTaGGAGTTTTTGCTCATGCTGACTTTACTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IKPNLLALVERS*EFLLMLTLLSF Trigger: GAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAGAGGTTTGGTTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481622.1 |
||
| CDS CAA 72 bp | ACCTCAACAGTTGCTCTCTTGTGGGAATTAGTAAATTaGAGCATACAGGGAGATTTCTTACCTTTGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSTVALLWELVN*SIQGDFLPLEA Trigger: AGCCTCCAAAGGTAAGAAATCTCCCTGTATGCTCAAATTTACTAATTCCCACAAGAGAGCAACTGTTGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495141.5 |
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