Pregenerated sensors for UBE2D3 (Homo sapiens)
Ensembl gene IDs: ENSG00000109332Ensembl transcript IDs: ENST00000321805.11, ENST00000338145.7, ENST00000343106.9, ENST00000349311.12, ENST00000357194.10, ENST00000394801.8, ENST00000394804.6, ENST00000453744.7, ENST00000502404.5, ENST00000502563.5, ENST00000502690.5, ENST00000503418.5, ENST00000503742.5, ENST00000505307.5, ENST00000508238.5, ENST00000508249.1, ENST00000508474.5, ENST00000508476.5, ENST00000508635.5, ENST00000508974.5, ENST00000513098.5, ENST00000514755.5, ENST00000618836.4
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTaGGTGGAGTGGGGCAAAGAGGGCAAATTCTTAGATTCTTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: ILSWVLYMALVMSNY*VEWGKEGKFLDSFK Trigger: CTTAAAAGAATCTAAGAATTTGCCCTCTTTGCCCCACTCCACCCAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR CCA 90 bp | TGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGGTGGAGTaGGGCAAAGAGGGCAAATTCTTAGATTCTTTTAAGATTTCATTG | + |
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Preference number: 1 (lower is better) Translates to: WVLYMALVMSNYWVE*GKEGKFLDSFKISL Trigger: CAATGAAATCTTAAAAGAATCTAAGAATTTGCCCTCTTTGCCCCACTCCACCCAGTAATTTGACATTACTAGTGCCATGTATAGGACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR CCA 90 bp | AGACAAGGAATAAGATTGCACGTAAGTGTAAGCAGTGCAAAAATGTaGAAGTGGAGGAGTCACAGATGTGCTAGAACTTTAAGAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: RQGIRLHVSVSSAKM*KWRSHRCARTLRNK Trigger: TTTATTTCTTAAAGTTCTAGCACATCTGTGACTCCTCCACTTCCACATTTTTGCACTGCTTACACTTACGTGCAATCTTATTCCTTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR CCA 90 bp | GTTAGGGATCCACCGTGTTTCATAAAAGTGTCTTACACTCATGTTTaGCTTTCAAGAAGTGATATGCCTACTAAAGCTGTTATTTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: VRDPPCFIKVSYTHV*LSRSDMPTKAVILR Trigger: TCTCAAAATAACAGCTTTAGTAGGCATATCACTTCTTGAAAGCCAAACATGAGTGTAAGACACTTTTATGAAACACGGTGGATCCCTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAGCAGTGCAAAAATGTaGAAGTGGAGGAGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLSSAKM*KWRSHR Trigger: TCTGTGACTCCTCCACTTCCACATTTTTGCACTGCT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGCTGGAGAAGCCTCTATaGCTTATTCCCTTAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLLEKPL*LIPLEA Trigger: TGCTTCTAAGGGAATAAGCCATAGAGGCTTCTCCAG...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGCTTTCCACATGTGTGTaGAGACAAGGAATAAGATTG | + |
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Preference number: 2 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLLSTCV*RQGIRL Trigger: CAATCTTATTCCTTGTCTGCACACACATGTGGAAAG...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGTCTTACACTCATGTTTaGCTTTCAAGAAGTGATATG | + |
|
Preference number: 2 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLSYTHV*LSRSDM Trigger: CATATCACTTCTTGAAAGCCAAACATGAGTGTAAGA...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR CCA 72 bp | ATAAGATTGCACGTAAGTGTAAGCAGTGCAAAAATGTaGAAGTGGAGGAGTCACAGATGTGCTAGAACTTTA | + |
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Preference number: 3 (lower is better) Translates to: IRLHVSVSSAKM*KWRSHRCARTL Trigger: TAAAGTTCTAGCACATCTGTGACTCCTCCACTTCCACATTTTTGCACTGCTTACACTTACGTGCAATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR CCA 72 bp | TACATGGCACTAGTAATGTCAAATTACTGGGTGGAGTaGGGCAAAGAGGGCAAATTCTTAGATTCTTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: YMALVMSNYWVE*GKEGKFLDSFK Trigger: CTTAAAAGAATCTAAGAATTTGCCCTCTTTGCCCCACTCCACCCAGTAATTTGACATTACTAGTGCCATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| 3UTR CCA 72 bp | CCACCGTGTTTCATAAAAGTGTCTTACACTCATGTTTaGCTTTCAAGAAGTGATATGCCTACTAAAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPCFIKVSYTHV*LSRSDMPTKAV Trigger: AACAGCTTTAGTAGGCATATCACTTCTTGAAAGCCAAACATGAGTGTAAGACACTTTTATGAAACACGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR GCA 90 bp | CGCCTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGGTCTCACACCAGCTCTaGCAGACACAGGCGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: RLDMGCHSQDVLVRSNSLVSHQL*QTQALG Trigger: ACCAAGCGCCTGTGTCTGGCAGAGCTGGTGTGAGAC...CAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514755.5 |
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| CDS-3UTR CCA 90 bp | CGCCTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAACAGATCGGAGATTaGACCAGGAGGGCGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RLDMGCHSQDVLVRSNSLKQIGD*TRRAGE Trigger: CTCCCCCGCCCTCCTGGTCCAATCTCCGATCTGTTT...CAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503418.5 |
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| CDS-3UTR TCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAAGTGGGGGCGAGGGTaGCGGGAAGAGCGGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLKWGRG*REERRW Trigger: CCACCTCCGCTCTTCCCGTCACCCTCGCCCCCACTT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR TCA 90 bp | CTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAAAGCACAAGACCGATGTaGGGCCGAAGCCAGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: LDMGCHSQDVLVRSNSLKSTRPM*GRSQTA Trigger: AGCCGTCTGGCTTCGGCCTCACATCGGTCTTGTGCT...TTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503418.5 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGCGAAGCCAGACGGCTTaGTTCCCACGTCCGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLRSQTA*FPRPGP Trigger: CGGCCCCGGACGTGGGAAGCAAGCCGTCTGGCTTCG...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGCCGGGGTGGGTGGGGTaGCGTGGCAAAGCCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLPGWVG*RGKATN Trigger: GTTGGTGGCTTTGCCACGCCACCCCACCCACCCCGG...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGCGATCCGGGGTGGGTaGGGTGGCGTGGCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLAIRGG*GGVAKP Trigger: TGGCTTTGCCACGCCACCCCACCCACCCCGGATCGC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAGCCGCGATCCGGGGTaGGTGGGGTGGCGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLSRDPG*VGWRGK Trigger: TTTGCCACGCCACCCCACCCACCCCGGATCGCGGCT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR TCA 90 bp | CTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAAACGTCCGGGGCCGAGTaGATACGTGTCAAGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LDMGCHSQDVLVRSNSLKTSGAE*IRVKPF Trigger: AAAGGGCTTGACACGTATTCACTCGGCCCCGGACGT...TTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000503418.5 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAAAGGAAGCAGCCGCTaGGCGATCCAGCCCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLKGSSR*AIQPHA Trigger: GGCGTGGGGCTGGATCGCGCAGCGGCTGCTTCCTTT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR GCA 90 bp | GATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCGTCTCACACCAGCTCTaGCAGACACAGGCGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: DMGCHSQDVLVRSNSLKFVSHQL*QTQAPL Trigger: AAGAGGCGCCTGTGTCTGGCAGAGCTGGTGTGAGAC...GAATTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503418.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTTAGATGTCTCACACCAGCTCTaGCAGACACAGGCGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GCHSQDVLVRSNSLKFLDVSHQL*QTQAQR Trigger: CCTCTGCGCCTGTGTCTGGCAGAGCTGGTGTGAGAC...ATCTAAGAATTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505307.5 ENST00000508974.5 |
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| CDS-3UTR CCA 90 bp | GATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCCTCGCGAGAACTTCGTaGCTGGCTAACCGAAGCGGT | + |
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Preference number: 4 (lower is better) Translates to: DMGCHSQDVLVRSNSLKFLARTS*LANRSG Trigger: ACCGCTTCGGTTAGCCAGCCACGAAGTTCTCGCGAG...GAATTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514755.5 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGTGGGTGGGGTGGCGTaGCAAAGCCACCAACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLVGGVA*QSHQQP Trigger: AGGCTGTTGGTGGCTTTGCCACGCCACCCCACCCAC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | CTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAACGAGAACTTCGTGGCTaGCTAACCGAAGCGGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LDMGCHSQDVLVRSNSLKRELRG*LTEAVA Trigger: AGCTACCGCTTCGGTTAGCCAGCCACGAAGTTCTCG...TTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514755.5 |
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| CDS-3UTR CCA 90 bp | CTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAACCAGACACAGGCGCTTaGTATCGAGGAGACGACTCT | + |
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Preference number: 4 (lower is better) Translates to: LDMGCHSQDVLVRSNSLKPDTGA*YRGDDS Trigger: AGAGTCGTCTCCTCGATACCAAGCGCCTGTGTCTGG...TTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514755.5 |
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| CDS-3UTR TCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAGCACAAGACCGATGTaGGGCCGAAGCCAGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLSTRPM*GRSQTA Trigger: AGCCGTCTGGCTTCGGCCTCACATCGGTCTTGTGCT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGACAGCCTCTGTACCGTaGTTTCGGCCCGAAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLTASVP*FRPEVG Trigger: CCCCACTTCGGGCCGAAAGCACGGTACAGAGGCTGT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGTCTCACACCAGCTCTaGCAGACACAGGCGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLVSHQL*QTQAQR Trigger: CCTCTGCGCCTGTGTCTGGCAGAGCTGGTGTGAGAC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453744.7 |
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| CDS-3UTR TCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGACGTCCGGGGCCGAGTaGATACGTGTCAAGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLTSGAE*IRVKPF Trigger: AAAGGGCTTGACACGTATTCACTCGGCCCCGGACGT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR GCA 90 bp | CAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTTAGATGGTATCCATAATGTCTCACACCAGCTCTaGCAGACACAGGCGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QDVLVRSNSLKFLDGIHNVSHQL*QTQAQR Trigger: CCTCTGCGCCTGTGTCTGGCAGAGCTGGTGTGAGAC...ATTATGGATACCATCTAAGAATTTCAGAGAATTAGAGCGCACTAAAACATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505307.5 ENST00000508974.5 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGGGAGGGTGAACGAGTaGCGGAAACCCTTAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLGRVNE*RKPLGS Trigger: TGAGCCTAAGGGTTTCCGCCACTCGTTCACCCTCCC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAAACAGATCGGAGATTaGACCAGGAGGGCGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLKQIGD*TRRAGE Trigger: CTCCCCCGCCCTCCTGGTCCAATCTCCGATCTGTTT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | GATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTACACCGCCTTGATATaGGCTGTCATTCCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: DMGCHSQDVLVRSNSLKFYTALI*AVIPRM Trigger: CATCCTGGGAATGACAGCCCATATCAAGGCGGTGTA...GAATTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000503418.5 ENST00000505307.5 ENST00000508635.5 ENST00000508974.5 ENST00000514755.5 |
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| CDS-3UTR CCA 90 bp | CTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATACACCGCCTTGATATaGGCTGTCATTCCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LDMGCHSQDVLVRSNSLKYTALI*AVIPRM Trigger: CATCCTGGGAATGACAGCCCATATCAAGGCGGTGTA...TTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000503418.5 ENST00000505307.5 ENST00000508635.5 ENST00000508974.5 ENST00000514755.5 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGTCTCACACCAGCTCTaGCAGACACAGGCGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLVSHQL*QTQAPF Trigger: AAAAGGCGCCTGTGTCTGGCAGAGCTGGTGTGAGAC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR GCA 90 bp | GATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTATTACGAAAGGAGATaGCGGAAAGAGCCTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: DMGCHSQDVLVRSNSLKFYYERR*RKEPEP Trigger: TGGTTCAGGCTCTTTCCGGCATCTCCTTTCGTAATA...GAATTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508635.5 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGACCGGAAGGAGACCATaGGAGGAAGGTAAAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLTGRRP*EEGKGS Trigger: GCTTCCTTTACCTTCCTCCCATGGTCTCCTTCCGGT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGACACAGGCGCCTTTTaGAAAAACGGAGCAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLDTGAF*KNGADQ Trigger: CTGATCTGCTCCGTTTTTGCAAAAGGCGCCTGTGTC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGTGTCAAATTACTGGGTaGAGTGGGGCAAAGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLCQITG*SGAKRA Trigger: TGCCCTCTTTGCCCCACTCCACCCAGTAATTTGACA...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAATTACTGGGTGGAGTaGGGCAAAGAGGGCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLNYWVE*GKEGKF Trigger: GAATTTGCCCTCTTTGCCCCACTCCACCCAGTAATT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR CCA 90 bp | CAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTTAGATGGTATCCATAATTACACCGCCTTGATATaGGCTGTCATTCCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QDVLVRSNSLKFLDGIHNYTALI*AVIPRM Trigger: CATCCTGGGAATGACAGCCCATATCAAGGCGGTGTA...ATTATGGATACCATCTAAGAATTTCAGAGAATTAGAGCGCACTAAAACATCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000503418.5 ENST00000505307.5 ENST00000508635.5 ENST00000508974.5 ENST00000514755.5 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGGTAATGTCAAATTACTaGGTGGAGTGGGGCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLVMSNY*VEWGKE Trigger: CTCTTTGCCCCACTCCACCCAGTAATTTGACATTAC...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR GCA 90 bp | GGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTTAGATTATCCAGCATATAGTTaGTTATCTACCCAGGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCHSQDVLVRSNSLKFLDYPAYS*LSTQDR Trigger: TCTATCCTGGGTAGATAAGCAACTATATGCTGGATA...ATCTAAGAATTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508974.5 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGATTCTAATACTCAGTTaGGTCCTATACATGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLILILS*VLYMAL Trigger: TAGTGCCATGTATAGGACCCAACTGAGTATTAGAAT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR CCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGTTTAGTGACTTGCACTaGGTTCCTCATAAAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLFSDLH*VPHKRQ Trigger: TTGTCTTTTATGAGGAACCCAGTGCAAGTCACTAAA...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGTTAACAGTTTTGTTATaGCAACACAAAACATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLLTVLL*QHKTWL Trigger: CAGCCATGTTTTGTGTTGGCATAACAAAACTGTTAA...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS-3UTR GCA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGCAATATTTAGTGACTTaGACTGGGTTCCTCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLQYLVT*TGFLIK Trigger: TTTTATGAGGAACCCAGTGCAAGTCACTAAATATTG...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS TCA 90 bp | GCGGATCAGTCCGCCAACGCCGCCGTCCCGAGCACAAGACCGATGTaGGGCCGAAGCCAGACGGCTTGCTTCCCACGTCCGGGGCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ADQSANAAVPSTRPM*GRSQTACFPRPGPS Trigger: ACTCGGCCCCGGACGTGGGAAGCAAGCCGTCTGGCTTCGGCCTCACATCGGTCTTGTGCTCGGGACGGCGGCGTTGGCGGACTGATCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394801.8 ENST00000394804.6 ENST00000502690.5 ENST00000503418.5 |
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| CDS GCA 90 bp | GGTGGGTGGGGTGGCGTGGCAAAGCCACCAACAGCCTCTGTACCGTaGTTTCGGCCCGAAGTGGGGGCGAGGGTGACGGGAAGAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGWGGVAKPPTASVP*FRPEVGARVTGRAE Trigger: CTCCGCTCTTCCCGTCACCCTCGCCCCCACTTCGGGCCGAAAGCACGGTACAGAGGCTGTTGGTGGCTTTGCCACGCCACCCCACCCACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000321805.11 ENST00000343106.9 ENST00000394804.6 ENST00000502563.5 ENST00000508249.1 ENST00000513098.5 |
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| CDS CCA 90 bp | CCAGGTCCCTTAAGACAGCCGCGATCCGGGGTGGGTGGGGTGGCGTaGCAAAGCCACCAACAGCCTCTGTACCGTGCTTTCGGCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGPLRQPRSGVGGVA*QSHQQPLYRAFGPK Trigger: CTTCGGGCCGAAAGCACGGTACAGAGGCTGTTGGTGGCTTTGCCACGCCACCCCACCCACCCCGGATCGCGGCTGTCTTAAGGGACCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000321805.11 ENST00000343106.9 ENST00000394804.6 ENST00000502563.5 ENST00000508249.1 ENST00000513098.5 |
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| CDS CCA 90 bp | CGGAGATTGGACCAGGAGGGCGGGGGAGGGAGGAGGATCATGAGCTaGGGGGAGGGTGAACGAGTGGCGGAAACCCTTAGGCTCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRLDQEGGGGRRIMS*GEGERVAETLRLRE Trigger: TTCTCTGAGCCTAAGGGTTTCCGCCACTCGTTCACCCTCCCCCCAGCTCATGATCCTCCTCCCTCCCCCGCCCTCCTGGTCCAATCTCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000349311.12 ENST00000394801.8 ENST00000394804.6 |
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| CDS CCA 90 bp | CCTGATGAATCCAGGTCCCTTAAGACAGCCGCGATCCGGGGTGGGTaGGGTGGCGTGGCAAAGCCACCAACAGCCTCTGTACCGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PDESRSLKTAAIRGG*GGVAKPPTASVPCF Trigger: AAAGCACGGTACAGAGGCTGTTGGTGGCTTTGCCACGCCACCCCACCCACCCCGGATCGCGGCTGTCTTAAGGGACCTGGATTCATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000321805.11 ENST00000343106.9 ENST00000394804.6 ENST00000502563.5 ENST00000508249.1 ENST00000513098.5 |
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| CDS TCA 90 bp | GTGAGGCCGAAGCCAGACGGCTTGCTTCCCACGTCCGGGGCCGAGTaGATACGTGTCAAGCCCTTTTCCTTCTTCTCGGAACAGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRPKPDGLLPTSGAE*IRVKPFSFFSEQHL Trigger: AAGGTGCTGTTCCGAGAAGAAGGAAAAGGGCTTGACACGTATTCACTCGGCCCCGGACGTGGGAAGCAAGCCGTCTGGCTTCGGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000394801.8 ENST00000394804.6 ENST00000502690.5 ENST00000503418.5 |
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| CDS CCA 90 bp | GAAACCCTTAGGCTCAGAGAAGCATCGAGAACCGGAAGGAGACCATaGGAGGAAGGTAAAGGAAGCAGCCGCTGCGCGATCCAGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETLRLREASRTGRRP*EEGKGSSRCAIQPH Trigger: GTGGGGCTGGATCGCGCAGCGGCTGCTTCCTTTACCTTCCTCCCATGGTCTCCTTCCGGTTCTCGATGCTTCTCTGAGCCTAAGGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394801.8 ENST00000394804.6 |
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| CDS-3UTR CAA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGCCGAAGCCAGACGGCTaGCTTCCCACGTCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLPKPDG*LPTSGA Trigger: GGCCCCGGACGTGGGAAGCAAGCCGTCTGGCTTCGG...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS CCA 90 bp | AGCATTCTCACATGCTTATCTCATCGCACACAGTATCCTTTCTGCTaGTCTCCAGCATCTACAGACGTTAAAGGCCCAAGAGGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SILTCLSHRTQYPFC*SPASTDVKGPRGGP Trigger: TGGCCCTCCTCTTGGGCCTTTAACGTCTGTAGATGCTGGAGACCAGCAGAAAGGATACTGTGTGCGATGAGATAAGCATGTGAGAATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000338145.7 ENST00000357194.10 ENST00000508238.5 |
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| CDS-3UTR CAA 90 bp | CAGGATGTTTTAGTGCGCTCTAATTCTCTGAAATTCTTAGATGGTATCCATAATCCGAAGCCAGACGGCTaGCTTCCCACGTCCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDVLVRSNSLKFLDGIHNPKPDG*LPTSGA Trigger: GGCCCCGGACGTGGGAAGCAAGCCGTCTGGCTTCGG...ATTATGGATACCATCTAAGAATTTCAGAGAATTAGAGCGCACTAAAACATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503418.5 |
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| CDS-3UTR CAA 90 bp | CTTGATATGGGCTGTCATTCCCAGGATGTTTTAGTGCGCTCTAATTCTCTGAAAGCCAGACACAGGCGCTaGGTATCGAGGAGACGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LDMGCHSQDVLVRSNSLKARHRR*VSRRRL Trigger: GAGTCGTCTCCTCGATACCAAGCGCCTGTGTCTGGC...TTTCAGAGAATTAGAGCGCACTAAAACATCCTGGGAATGACAGCCCATATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514755.5 |
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| CDS GCA 90 bp | GAAAGCATTCTCACATGCTTATCTCATCGCACACAGTATCCTTTCTaGTGGTCTCCAGCATCTACAGACGTTAAAGGCCCAAGAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESILTCLSHRTQYPF*WSPASTDVKGPRGG Trigger: CCCTCCTCTTGGGCCTTTAACGTCTGTAGATGCTGGAGACCAGCAGAAAGGATACTGTGTGCGATGAGATAAGCATGTGAGAATGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000338145.7 ENST00000357194.10 ENST00000508238.5 |
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| CDS-3UTR CAA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAGACACAGGCGCCTTTaGCAAAAACGGAGCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLRHRRL*QKRSRS Trigger: TGATCTGCTCCGTTTTTGCAAAAGGCGCCTGTGTCT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394804.6 |
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| CDS CCA 90 bp | AGAATCTGTGTAACAATAATACAGATGAGGGCGGAAGCTTCCACATaGTCTGAATCTTGCAACATTAAAGAAAAGGCAAACCTTATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RICVTIIQMRAEAST*SESCNIKEKANLIP Trigger: AGGAATAAGGTTTGCCTTTTCTTTAATGTTGCAAGATTCAGACCATGTGGAAGCTTCCGCCCTCATCTGTATTATTGTTACACAGATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503742.5 |
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| CDS-3UTR CAA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGAATCTGATTATCACATaGCAAACTCGCCCAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLNLIIT*QTRPGK Trigger: TTTTCCTGGGCGAGTTTGCAATGTGATAATCAGATT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS TCA 90 bp | AAAAATCAGATAATGTTGACATCTTTCCCTGCAAAACTGAGGAACTaGACAAATCAAACAATGTATGCACCAACAGTACACAAGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KNQIMLTSFPAKLRN*TNQTMYAPTVHKPV Trigger: TACAGGCTTGTGTACTGTTGGTGCATACATTGTTTGATTTGTTCAGTTCCTCAGTTTTGCAGGGAAAGATGTCAACATTATCTGATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS-3UTR CAA 90 bp | GATTCTAATACTCAGTTGGGTCCTATACATGGCACTAGTAATGTCAAATTACTGACAATATTTAGTGACTaGCACTGGGTTCCTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: DSNTQLGPIHGTSNVKLLTIFSD*HWVPHK Trigger: TTTATGAGGAACCCAGTGCAAGTCACTAAATATTGT...CAGTAATTTGACATTACTAGTGCCATGTATAGGACCCAACTGAGTATTAGAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394804.6 ENST00000453744.7 ENST00000618836.4 |
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| CDS CCA 90 bp | GCCTTCAACATTTTCAAACTAACAGTTTCTCTTAAGTTTAGTCTATaGCATAAGTCAGTACACCCATTAAGTCTAGGGACTACTATATCT | + |
|
Preference number: 5 (lower is better) Translates to: AFNIFKLTVSLKFSL*HKSVHPLSLGTTIS Trigger: AGATATAGTAGTCCCTAGACTTAATGGGTGTACTGACTTATGCCATAGACTAAACTTAAGAGAAACTGTTAGTTTGAAAATGTTGAAGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS TCA 72 bp | TCCGCCAACGCCGCCGTCCCGAGCACAAGACCGATGTaGGGCCGAAGCCAGACGGCTTGCTTCCCACGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SANAAVPSTRPM*GRSQTACFPRP Trigger: CGGACGTGGGAAGCAAGCCGTCTGGCTTCGGCCTCACATCGGTCTTGTGCTCGGGACGGCGGCGTTGGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394801.8 ENST00000394804.6 ENST00000502690.5 ENST00000503418.5 |
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| CDS GCA 72 bp | GGTGGCGTGGCAAAGCCACCAACAGCCTCTGTACCGTaGTTTCGGCCCGAAGTGGGGGCGAGGGTGACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGVAKPPTASVP*FRPEVGARVTG Trigger: TCCCGTCACCCTCGCCCCCACTTCGGGCCGAAAGCACGGTACAGAGGCTGTTGGTGGCTTTGCCACGCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000321805.11 ENST00000343106.9 ENST00000394804.6 ENST00000502563.5 ENST00000508249.1 ENST00000513098.5 |
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| CDS CCA 72 bp | GACCAGGAGGGCGGGGGAGGGAGGAGGATCATGAGCTaGGGGGAGGGTGAACGAGTGGCGGAAACCCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DQEGGGGRRIMS*GEGERVAETLR Trigger: CCTAAGGGTTTCCGCCACTCGTTCACCCTCCCCCCAGCTCATGATCCTCCTCCCTCCCCCGCCCTCCTGGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000349311.12 ENST00000394801.8 ENST00000394804.6 ENST00000503418.5 |
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| CDS CCA 72 bp | TCCAGGTCCCTTAAGACAGCCGCGATCCGGGGTGGGTaGGGTGGCGTGGCAAAGCCACCAACAGCCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SRSLKTAAIRGG*GGVAKPPTASV Trigger: TACAGAGGCTGTTGGTGGCTTTGCCACGCCACCCCACCCACCCCGGATCGCGGCTGTCTTAAGGGACCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000321805.11 ENST00000343106.9 ENST00000394804.6 ENST00000502563.5 ENST00000508249.1 ENST00000513098.5 |
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| CDS CCA 72 bp | AGGCTCAGAGAAGCATCGAGAACCGGAAGGAGACCATaGGAGGAAGGTAAAGGAAGCAGCCGCTGCGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: RLREASRTGRRP*EEGKGSSRCAI Trigger: GATCGCGCAGCGGCTGCTTCCTTTACCTTCCTCCCATGGTCTCCTTCCGGTTCTCGATGCTTCTCTGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394801.8 ENST00000394804.6 |
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| CDS TCA 72 bp | AAGCCAGACGGCTTGCTTCCCACGTCCGGGGCCGAGTaGATACGTGTCAAGCCCTTTTCCTTCTTCTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KPDGLLPTSGAE*IRVKPFSFFSE Trigger: TTCCGAGAAGAAGGAAAAGGGCTTGACACGTATTCACTCGGCCCCGGACGTGGGAAGCAAGCCGTCTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000394801.8 ENST00000394804.6 ENST00000502690.5 ENST00000503418.5 |
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| CDS GCA 72 bp | AGCTGTAAACACTCCACCCTATTAGCTTTCCCTTACTaGCATCGCACCCCTTATCCACCCCCACTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCKHSTLLAFPY*HRTPYPPPLSS Trigger: GCTGGAGAGTGGGGGTGGATAAGGGGTGCGATGGCAGTAAGGGAAAGCTAATAGGGTGGAGTGTTTACAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502404.5 |
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| CDS GCA 72 bp | CTCACATGCTTATCTCATCGCACACAGTATCCTTTCTaGTGGTCTCCAGCATCTACAGACGTTAAAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LTCLSHRTQYPF*WSPASTDVKGP Trigger: TGGGCCTTTAACGTCTGTAGATGCTGGAGACCAGCAGAAAGGATACTGTGTGCGATGAGATAAGCATGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000338145.7 ENST00000357194.10 ENST00000508238.5 |
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| CDS CCA 72 bp | ACATGCTTATCTCATCGCACACAGTATCCTTTCTGCTaGTCTCCAGCATCTACAGACGTTAAAGGCCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TCLSHRTQYPFC*SPASTDVKGPR Trigger: TCTTGGGCCTTTAACGTCTGTAGATGCTGGAGACCAGCAGAAAGGATACTGTGTGCGATGAGATAAGCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000338145.7 ENST00000357194.10 ENST00000508238.5 |
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| CDS CAA 72 bp | GAGCTTAGACCAGAGAGAGCTCAACATTCACGTTATTaGTTGAACTTCCAAGACCACTTTCAGAGGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ELRPERAQHSRY*LNFQDHFQRPS Trigger: TGAGGGCCTCTGAAAGTGGTCTTGGAAGTTCAACAAATAACGTGAATGTTGAGCTCTCTCTGGTCTAAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS TCA 72 bp | TTAGACCAGAGAGAGCTCAACATTCACGTTATTTGTTaGACTTCCAAGACCACTTTCAGAGGCCCTCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LDQRELNIHVIC*TSKTTFRGPQL Trigger: CAGTTGAGGGCCTCTGAAAGTGGTCTTGGAAGTTCAACAAATAACGTGAATGTTGAGCTCTCTCTGGTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS CAA 72 bp | CTTAGACCAGAGAGAGCTCAACATTCACGTTATTTGTaGAACTTCCAAGACCACTTTCAGAGGCCCTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LRPERAQHSRYL*NFQDHFQRPST Trigger: AGTTGAGGGCCTCTGAAAGTGGTCTTGGAAGTTCAACAAATAACGTGAATGTTGAGCTCTCTCTGGTCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS CCA 72 bp | ATGATCATGCTGGTGGAGAGCCACTGCACTCTAGCTTaGACAACAATGTTTAATGCCTATTTTATACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MIMLVESHCTLA*TTMFNAYFILA Trigger: AGCCAGTATAAAATAGGCATTAAACATTGTTGTCCAAGCTAGAGTGCAGTGGCTCTCCACCAGCATGATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS GCA 72 bp | ACAAATCATATTAATTCACATTATTACGAAAGGAGATaGCGGAAAGAGCCTGAACCAGTTAAAGCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TNHINSHYYERR*RKEPEPVKAAA Trigger: GGCGGCTGCTTTAACTGGTTCAGGCTCTTTCCGGCATCTCCTTTCGTAATAATGTGAATTAATATGATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508476.5 |
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| CDS CCA 72 bp | GTAACAATAATACAGATGAGGGCGGAAGCTTCCACATaGTCTGAATCTTGCAACATTAAAGAAAAGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VTIIQMRAEAST*SESCNIKEKAN Trigger: GTTTGCCTTTTCTTTAATGTTGCAAGATTCAGACCATGTGGAAGCTTCCGCCCTCATCTGTATTATTGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503742.5 |
||
| CDS CAA 72 bp | AATTTATGTAAGGGTCCCACTATGGCACTGACTTGGTaGGGGGAAATAAATGAGTCCTCTAAATTTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NLCKGPTMALTW*GEINESSKFCS Trigger: TGAACAAAATTTAGAGGACTCATTTATTTCCCCCAACCAAGTCAGTGCCATAGTGGGACCCTTACATAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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| CDS TCA 72 bp | GAAATACAGTTTAAGAGTTTGAATTTAGGTAAGTTTTaGGCAGAGGATCTTAGAGCAGTGCACAACGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: EIQFKSLNLGKF*AEDLRAVHNAI Trigger: TATCGCGTTGTGCACTGCTCTAAGATCCTCTGCTCAAAACTTACCTAAATTCAAACTCTTAAACTGTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508476.5 |
||
| CDS CCA 72 bp | GTGGGAAAGCTCTTTCAATGGAGCTGCTATTTTTATTaGGTAAGTTTGTATTCTGTAGCAGCATGGAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: VGKLFQWSCYFY*VSLYSVAAWNK Trigger: TTTATTCCATGCTGCTACAGAATACAAACTTACCCAATAAAAATAGCAGCTCCATTGAAAGAGCTTTCCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508474.5 |
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