Pregenerated sensors for UBE2D2 (Homo sapiens)
Ensembl gene IDs: ENSG00000131508Ensembl transcript IDs: ENST00000398733.8, ENST00000398734.8, ENST00000505007.5, ENST00000505548.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTTAACTTTTGTGCAAGAGTGTAAAGATGCATTTGAAAGAACCTaGTGGCTAGAGCATCAGCCATGGCTTTCAGGTTGGCCTAGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: SLTFVQECKDAFERT*WLEHQPWLSGWPSL Trigger: TAAACTAGGCCAACCTGAAAGCCATGGCTGATGCTCTAGCCATCAGGTTCTTTCAAATGCATCTTTACACTCTTGCACAAAAGTTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTTATCAGGTAAACATGTaGACAGGGGAAGATGAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCYQVNM*TGEDEA Trigger: CGCCTCATCTTCCCCTGTGCACATGTTTACCTGATA...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTCAGATTAATCATTCTTaGAAGTACAAGCTCCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCQINHS*KYKLQR Trigger: CCTCTGGAGCTTGTACTTTCAAGAATGATTAATCTG...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTTCCTTCGGAATAAAATaGATACAGACACAGCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCSFGIK*IQTQLH Trigger: ATGAAGCTGTGTCTGTATTCATTTTATTCCGAAGGA...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTGGAGATGTAAAAGAGTaGGGAACAAAGCCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCGDVKE*GTKPIT Trigger: TGTGATGGGCTTTGTTCCCAACTCTTTTACATCTCC...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCACACCATGCGGGCCTaGAAGGGCAGCCGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHHTMRA*KGSRGG Trigger: TCCTCCCCGGCTGCCCTTCCAGGCCCGCATGGTGTG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATTCGGCCGGCCTCTCTTaGTCGGACAGCCGGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHSAGLS*SDSRRD Trigger: ATCCCTCCGGCTGTCCGACCAAGAGAGGCCGGCCGA...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCCAACCCCGCCATCCTaGCCCGACAATGGCCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHPTPPS*PDNGPQ Trigger: TTGAGGGCCATTGTCGGGCCAGGATGGCGGGGTTGG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGACAGCCGGAGGGATTaGCTGTCTTCCTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHDSRRD*LSSSLL Trigger: CAGCAGGGAGGAAGACAGGCAATCCCTCCGGCTGTC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATATCCTGGCCCGACAATaGCCCTCAAGTGCAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHILARQ*PSSAAA Trigger: TGCCGCTGCACTTGAGGGCCATTGTCGGGCCAGGAT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATACAATGGCCCTCAAGTaGAGCGGCAGTCCCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHTMALK*SGSPRL Trigger: CAGTCTGGGACTGCCGCTGCACTTGAGGGCCATTGT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGGGTGGACCGATGTGTaGTGCCACCCAAGAGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHGWTDV*CHPRGK Trigger: CTTACCTCTTGGGTGGCAGCACACATCGGTCCACCC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR CCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTCCTCCCTGCTGCAGGTaGACCGAGGGACGCGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCPPCCR*TEGRAG Trigger: GCCCGCGCGTCCCTCGGTCCACCTGCAGCAGGGAGG...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGCGGCAGTCCCAGACTaGAGAGAAGCCCTAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHAAVPD*REALRV Trigger: GACTCTTAGGGCTTCTCTCCAGTCTGGGACTGCCGC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR CCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTGGCCCACTCAGCTCCTaGGCCTGCCGCAGCGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCGPLSS*ACRSGH Trigger: GTGACCGCTGCGGCAGGCCCAGGAGCTGAGTGGGCC...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGAGCTAGGGCAGGTGTaGGAGGAGGGAACAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHELGQV*EEGTEM Trigger: CATTTCTGTTCCCTCCTCCCACACCTGCCCTAGCTC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR GCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTCTCAGCTCCTGGGCCTaGCGCAGCGGTCACCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCLSSWA*RSGHRI Trigger: GATGCGGTGACCGCTGCGGCAGGCCCAGGAGCTGAG...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTTCTTCAGAGCCATGGTaGGAGGCGGGTGGCGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCSSEPW*EAGGGG Trigger: GCCGCCGCCACCCGCCTCCCACCATGGCTCTGAAGA...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATAGGAGGGAACAGAAATaGGGCGAGAAGCCCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHRREQK*GEKPFR Trigger: TCGAAAGGGCTTCTCGCCCCATTTCTGTTCCCTCCT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGCATTTGAAAGAACCTaGTGGCTAGAGCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHAFERT*WLEHQP Trigger: TGGCTGATGCTCTAGCCATCAGGTTCTTTCAAATGC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR GCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTTGTCTTCCTCCCTGCTaGAGGTGGACCGAGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCCLPPC*RWTEGR Trigger: GCGTCCCTCGGTCCACCTGCAGCAGGGAGGAAGACA...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR GCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTGCCTGTCTTCCTCCCTaGTGCAGGTGGACCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCACLPP*CRWTEG Trigger: TCCCTCGGTCCACCTGCAGCAGGGAGGAAGACAGGC...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATACTCTTAACAGTTTCTaGACAAGCAGGGTGGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHTLNSF*TSRVDR Trigger: TCGGTCCACCCTGCTTGTCCAGAAACTGTTAAGAGT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCACCCAAGAGGTAAGTaGACTCAGGATATACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHHPRGK*TQDILV Trigger: CACAAGTATATCCTGAGTTCACTTACCTCTTGGGTG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCTCCAAACAAGACTGTaGTCTTGTTTCCCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHLQTRL*SCFPGL Trigger: CAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATATAATCTCCTATAGGTaGGTGGAGCCTTTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHIISYR*VEPFLS Trigger: GGAAAGAAAAGGCTCCACTCACCTATAGGAGATTAT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCAGATTAATCATTCTTaGAAGTACAAGCTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHQINHS*KYKLQR Trigger: CCTCTGGAGCTTGTACTTTCAAGAATGATTAATCTG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000398734.8 |
||
| CDS-3UTR CCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTGTCGGCAGGAGAAGATaGAGAGTTGAGGAAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCVGRRR*RVEESG Trigger: CCCGCTTTCCTCAACTCTCCATCTTCTCCTGCCGAC...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATTCCTTCGGAATAAAATaGATACAGACACAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHSFGIK*IQTQLH Trigger: ATGAAGCTGTGTCTGTATTCATTTTATTCCGAAGGA...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTCTAGAGCATCAGCCATaGCTTTCAGGTTGGCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCLEHQP*LSGWPS Trigger: ACTAGGCCAACCTGAAAGCCATGGCTGATGCTCTAG...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CCA 90 bp | TATGTAGACTCTCCAAACAAGACTGTGCTCTTGTTTCCCAGGTTTGGTCAATGTCCATGGCTTTCAGGTTaGCCTAGTTTACAATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YVDSPNKTVLLFPRFGQCPWLSG*PSLQLG Trigger: TCCTAATTGTAAACTAGGCCAACCTGAAAGCCATGG...ACATTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTTTGGAGAGTCTACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS CCA 90 bp | GCGGGTCCGGCGGGACGGGCTGAGGGCCGGGGCCCACTCAGCTCCTaGGCCTGCCGCAGCGGTCACCGCATCACCCGGCGGCGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGPAGRAEGRGPLSS*ACRSGHRITRRRPL Trigger: AAGGGGCCGCCGCCGGGTGATGCGGTGACCGCTGCGGCAGGCCCAGGAGCTGAGTGGGCCCCGGCCCTCAGCCCGTCCCGCCGGACCCGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS GCA 90 bp | CCGGCGGGACGGGCTGAGGGCCGGGGCCCACTCAGCTCCTGGGCCTaGCGCAGCGGTCACCGCATCACCCGGCGGCGGCCCCTTTATTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAGRAEGRGPLSSWA*RSGHRITRRRPLYS Trigger: CGAATAAAGGGGCCGCCGCCGGGTGATGCGGTGACCGCTGCGGCAGGCCCAGGAGCTGAGTGGGCCCCGGCCCTCAGCCCGTCCCGCCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS CCA 90 bp | CGCCAGAAAGCAAAAGCCCAAGCCTCGGGCTCGGCCGGCCTCTCTTaGTCGGACAGCCGGAGGGATTGCCTGTCTTCCTCCCTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQKAKAQASGSAGLS*SDSRRDCLSSSLLQ Trigger: CTGCAGCAGGGAGGAAGACAGGCAATCCCTCCGGCTGTCCGACCAAGAGAGGCCGGCCGAGCCCGAGGCTTGGGCTTTTGCTTTCTGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS CCA 90 bp | ATCCTGGCCCGACAATGGCCCTCAAGTGCAGCGGCAGTCCCAGACTaGAGAGAAGCCCTAAGAGTCCACACCATGCGGGCCTGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILARQWPSSAAAVPD*REALRVHTMRAWKG Trigger: GCCCTTCCAGGCCCGCATGGTGTGGACTCTTAGGGCTTCTCTCCAGTCTGGGACTGCCGCTGCACTTGAGGGCCATTGTCGGGCCAGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS CCA 90 bp | TCAGCCCGAGCTCAGGCGGTTTTGTGGAGGGAGCTAGGGCAGGTGTaGGAGGAGGGAACAGAAATGGGGCGAGAAGCCCTTTCGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SARAQAVLWRELGQV*EEGTEMGREALSTS Trigger: AGAGGTCGAAAGGGCTTCTCGCCCCATTTCTGTTCCCTCCTCCCACACCTGCCCTAGCTCCCTCCACAAAACCGCCTGAGCTCGGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCTCGGCCGGCCTCTCTaGGTCGGACAGCCGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHLGRPL*VGQPEG Trigger: TCCCTCCGGCTGTCCGACCAAGAGAGGCCGGCCGAG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGGACAGCCGGAGGGATaGCCTGTCTTCCTCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHGQPEG*PVFLPA Trigger: AGCAGGGAGGAAGACAGGCAATCCCTCCGGCTGTCC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATCGAGCTCAGGCGGTTTaGTGGAGGGAGCTAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHRAQAV*WRELGQ Trigger: CTGCCCTAGCTCCCTCCACAAAACCGCCTGAGCTCG...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGGAGAAGATGGAGAGTaGAGGAAAGCGGGTCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHGEDGE*RKAGPA Trigger: CGCCGGACCCGCTTTCCTCAACTCTCCATCTTCTCC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGAACTCAGGATATACTaGTGGATCGGGCAAAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHELRIY*WIGQNG Trigger: GCCGTTTTGCCCGATCCACAAGTATATCCTGAGTTC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGGAGATGTAAAAGAGTaGGGAACAAAGCCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHGDVKE*GTKPIT Trigger: TGTGATGGGCTTTGTTCCCAACTCTTTTACATCTCC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATAACAAGACTGTGCTCTaGTTTCCCAGGTTTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHNKTVL*FPRFGQ Trigger: TTGACCAAACCTGGGAAACAAGAGCACAGTCTTGTT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATAAAGGATCATCTGGATaGGGATCACACAACAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHKGSSG*GSHNRE Trigger: TTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000398733.8 ENST00000398734.8 ENST00000505548.5 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATAGATCATTCAATTCCTaGTGGATTCTCTTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHRSFNS*WILFRA Trigger: GGCTCTGAAGAGAATCCACAAGGAATTGAATGATCT...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000398734.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATTCCCGAGCTATTCTGTaGTACTTTTCTCTATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHSRAIL*YFSLSV Trigger: AACAGATAGAGAAAAGTACAACAGAATAGCTCGGGA...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398733.8 ENST00000398734.8 ENST00000505548.5 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTGTATCAGGTAAACATGTGCACAGGGGAAGATGAGGCGTGGGCTCATGAATGTCACAAGGTTTaGATGAAATGCAGCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLYQVNMCTGEDEAWAHECHKV*MKCSLV Trigger: AACTAAGCTGCATTTCATCAAAACCTTGTGACATTC...ATGAGCCCACGCCTCATCTTCCCCTGTGCACATGTTTACCTGATACAGCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398733.8 |
||
| CDS CAA 90 bp | CTGAGGCCGCCTCGGCGATCTCGGTCGGCAGGAGAAGATGGAGAGTaGAGGAAAGCGGGTCCGGCGGGACGGGCTGAGGGCCGGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRPPRRSRSAGEDGE*RKAGPAGRAEGRGP Trigger: TGGGCCCCGGCCCTCAGCCCGTCCCGCCGGACCCGCTTTCCTCAACTCTCCATCTTCTCCTGCCGACCGAGATCGCCGAGGCGGCCTCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS CCA 72 bp | GAGGCCGCCTCGGCGATCTCGGTCGGCAGGAGAAGATaGAGAGTTGAGGAAAGCGGGTCCGGCGGGACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EAASAISVGRRR*RVEESGSGGTG Trigger: GCCCGTCCCGCCGGACCCGCTTTCCTCAACTCTCCATCTTCTCCTGCCGACCGAGATCGCCGAGGCGGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS TCA 72 bp | CTCGGCGATCTCGGTCGGCAGGAGAAGATGGAGAGTTaGGGAAAGCGGGTCCGGCGGGACGGGCTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGDLGRQEKMES*GKRVRRDGLRA Trigger: GGCCCTCAGCCCGTCCCGCCGGACCCGCTTTCCTCAACTCTCCATCTTCTCCTGCCGACCGAGATCGCCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS GCA 72 bp | TCGGCCGGCCTCTCTTGGTCGGACAGCCGGAGGGATTaGCTGTCTTCCTCCCTGCTGCAGGTGGACCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGLSWSDSRRD*LSSSLLQVDRG Trigger: CCCTCGGTCCACCTGCAGCAGGGAGGAAGACAGGCAATCCCTCCGGCTGTCCGACCAAGAGAGGCCGGCCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS CAA 72 bp | CCTCGGCGATCTCGGTCGGCAGGAGAAGATGGAGAGTaGAGGAAAGCGGGTCCGGCGGGACGGGCTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRRSRSAGEDGE*RKAGPAGRAEG Trigger: GCCCTCAGCCCGTCCCGCCGGACCCGCTTTCCTCAACTCTCCATCTTCTCCTGCCGACCGAGATCGCCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS CCA 72 bp | GCAAAAGCCCAAGCCTCGGGCTCGGCCGGCCTCTCTTaGTCGGACAGCCGGAGGGATTGCCTGTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AKAQASGSAGLS*SDSRRDCLSSS Trigger: GGAGGAAGACAGGCAATCCCTCCGGCTGTCCGACCAAGAGAGGCCGGCCGAGCCCGAGGCTTGGGCTTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS CAA 72 bp | AGCAAAAGCCCAAGCCTCGGGCTCGGCCGGCCTCTCTaGGTCGGACAGCCGGAGGGATTGCCTGTCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSPSLGLGRPL*VGQPEGLPVFL Trigger: GAGGAAGACAGGCAATCCCTCCGGCTGTCCGACCAAGAGAGGCCGGCCGAGCCCGAGGCTTGGGCTTTTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398733.8 ENST00000505007.5 |
||
| CDS GCA 72 bp | CAACCCCGCCATCCTGGCCCGACAATGGCCCTCAAGTaGAGCGGCAGTCCCAGACTGGAGAGAAGCCCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPRHPGPTMALK*SGSPRLERSPK Trigger: CTTAGGGCTTCTCTCCAGTCTGGGACTGCCGCTGCACTTGAGGGCCATTGTCGGGCCAGGATGGCGGGGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS CCA 72 bp | CGACAATGGCCCTCAAGTGCAGCGGCAGTCCCAGACTaGAGAGAAGCCCTAAGAGTCCACACCATGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQWPSSAAAVPD*REALRVHTMRA Trigger: GGCCCGCATGGTGTGGACTCTTAGGGCTTCTCTCCAGTCTGGGACTGCCGCTGCACTTGAGGGCCATTGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505548.5 |
||
| CDS CAA 72 bp | AAACGGCTTCCTCTGTCAGCCCGAGCTCAGGCGGTTTaGTGGAGGGAGCTTGTGGATTCTCTTCAGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KRLPLSARAQAV*WRELVDSLQSH Trigger: ATGGCTCTGAAGAGAATCCACAAGCTCCCTCCACAAAACCGCCTGAGCTCGGGCTGACAGAGGAAGCCGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505007.5 |
||
| CDS CAA 72 bp | GCTGCCACCCAAGAGGTAAGTGAACTCAGGATATACTaGTGGATCGGGCAAAACGGCTTCCTCTGTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AATQEVSELRIY*WIGQNGFLCQP Trigger: GGGCTGACAGAGGAAGCCGTTTTGCCCGATCCACAAGTATATCCTGAGTTCACTTACCTCTTGGGTGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505007.5 ENST00000505548.5 |
||