Pregenerated sensors for UBE2D1 (Homo sapiens)
Ensembl gene IDs: ENSG00000072401Ensembl transcript IDs: ENST00000373910.9, ENST00000606483.1, ENST00000615793.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTGTAGATCTTGTAAGCTaGAGATGCAGATGTCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: IFLHTSTATAIIRRATTVVDLVS*RCRCPS Trigger: ACTTGGACATCTGCATCTTCAGCTTACAAGATCTAC...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR TCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCATTTCTTTTGGATGGGTaGTACTGCCTTATACTCATT | + |
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Preference number: 2 (lower is better) Translates to: ATAIIRRATTVLKNDTHSFLLDG*YCLILI Trigger: AATGAGTATAAGGCAGTATCACCCATCCAAAAGAAA...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR CCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCATCAATTACATCAGGGTaGGGGCATTTTAATGAATTA | + |
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Preference number: 2 (lower is better) Translates to: ATAIIRRATTVLKNDTHSSITSG*GHFNEL Trigger: TAATTCATTAAAATGCCCCCACCCTGATGTAATTGA...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR CCA 90 bp | GTCTATAAAGACCTTTCTTTTGGATGGGTGATACTGCCTTATACTCATTTCAGTTTAATTATCAGCCGTTaGGGTTTTTCAATACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VYKDLSFGWVILPYTHFSLIISR*GFSILF Trigger: GAACAGTATTGAAAAACCCCAACGGCTGATAATTAA...ACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR CCA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTAATTATCAGCCGTTaGGGTTTTTCAATACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HILTYFYSYCNNQKGYNCLIISR*GFSILF Trigger: GAACAGTATTGAAAAACCCCAACGGCTGATAATTAA...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR CCA 72 bp | GTGACTGTGCAGGTCTATAAAGACCTTTCTTTTGGATaGGTGATACTGCCTTATACTCATTTCAGTACTTTT | + |
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Preference number: 3 (lower is better) Translates to: VTVQVYKDLSFG*VILPYTHFSTF Trigger: AAAAGTACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGACCTGCACAGTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR CAA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCACTTAATTATCAGCCGTaGGGGTTTTTCAATACTGTT | + |
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Preference number: 3 (lower is better) Translates to: ATAIIRRATTVLKNDTHSLNYQP*GFFNTV Trigger: AACAGTATTGAAAAACCCCAACGGCTGATAATTAAG...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR CAA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTGACACTCACTCAAGGTaGACAAGCATGCTAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: IFLHTSTATAIIRRATTVDTHSR*TSMLNI Trigger: AATGTTTAGCATGCTTGTCAACCTTGAGTGAGTGTC...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| 3UTR-3UTR CAA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTCTTAATTATCAGCCGTaGGGGTTTTTCAATACTGTT | + |
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Preference number: 3 (lower is better) Translates to: HILTYFYSYCNNQKGYNCLNYQP*GFFNTV Trigger: AACAGTATTGAAAAACCCCAACGGCTGATAATTAAG...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR GCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTGAGTGTGCGCGAGTGTaGGGGCGGGGACGCCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRAECARV*GRGRRR Trigger: TCGCCGGCGTCCCCGCCCGCACACTCGCGCACACTC...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTCGGTTAGCCGCTCCCTaGCTCGCTCCGGGCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRARLAAP*LAPGAG Trigger: ACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAACCG...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCACGGTTAGCCGCTCCCTaGCTCGCTCCGGGCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATAIIRRATTVLKNDTHSRLAAP*LAPGAG Trigger: ACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAACCG...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCACGCTGGCAGCTAGGCTaGCTCCGCGCGGTGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ATAIIRRATTVLKNDTHSRWQLG*LRAVGP Trigger: GGGACCCACCGCGCGGAGCCAGCCTAGCTGCCAGCG...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTGGTCAGGGATGGCGGTaGGGACACCGGCCGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRAGQGWR*GHRPAG Trigger: CCCTGCCGGCCGGTGTCCCCACCGCCATCCCTGACC...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR GCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTGGTCCCTGCTCCGTGTaGGCCCGAGCGCGAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRAGPCSV*ARARVC Trigger: GCACACTCGCGCTCGGGCGCACACGGAGCAGGGACC...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | GTCTATAAAGACCTTTCTTTTGGATGGGTGATACTGCCTTATACTCATTTCAGTCGCTGGCAGCTAGGCTaGCTCCGCGCGGTGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VYKDLSFGWVILPYTHFSRWQLG*LRAVGP Trigger: GGGACCCACCGCGCGGAGCCAGCCTAGCTGCCAGCG...ACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTGCCATGGGTCAGGGATaGCGGTGGGGACACCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRAAMGQG*RWGHRP Trigger: CGGCCGGTGTCCCCACCGCCATCCCTGACCCATGGC...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTTGGGTCGTCGCGGGTTaGGCTCGCTGGCAGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRAWVVAG*ARWQLG Trigger: GCCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCA...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTCGGGGCTCAGGGGCGTaGGTCGTCGCGGGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVRGSGA*VVAGWA Trigger: AGCCCAACCCGCGACGACCCACGCCCCTGAGCCCCG...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | TCTACAGAATATCCTAAGACAAGGGAGACACAGTTAATTCACTTAATTATCAGCGGTCAGGGATGGCGGTaGGGACACCGGCCGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STEYPKTRETQLIHLIISGQGWR*GHRPAG Trigger: CCCTGCCGGCCGGTGTCCCCACCGCCATCCCTGACC...GCTGATAATTAAGTGAATTAACTGTGTCTCCCTTGTCTTAGGATATTCTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTGCCATGGGTCAGGGATaGCGGTGGGGACACCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HILTYFYSYCNNQKGYNCAMGQG*RWGHRP Trigger: CGGCCGGTGTCCCCACCGCCATCCCTGACCCATGGC...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTGCGGGTTGGGCTCGCTaGCAGCTAGGCTGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVAGWAR*QLGWLR Trigger: GCGGAGCCAGCCTAGCTGCCAGCGAGCCCAACCCGC...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTGGGTCGTCGCGGGTTaGGCTCGCTGGCAGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVWVVAG*ARWQLG Trigger: GCCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCA...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCAGGTCCAGCTGAACAGTaGGCAGGTGGATCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ATAIIRRATTVLKNDTHSGPAEQ*AGGSRC Trigger: ACAGCGCGATCCACCTGCTCACTGTTCAGCTGGACC...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTCCTCTTCAGCGCCATaGGTCAGGGATGGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HILTYFYSYCNNQKGYNCSSSAP*VRDGGG Trigger: CCCACCGCCATCCCTGACCCATGGCGCTGAAGAGGA...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | GTCTATAAAGACCTTTCTTTTGGATGGGTGATACTGCCTTATACTCATTTCAGTGGTCCAGCTGAACAGTaGGCAGGTGGATCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VYKDLSFGWVILPYTHFSGPAEQ*AGGSRC Trigger: ACAGCGCGATCCACCTGCTCACTGTTCAGCTGGACC...ACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTTCCCACAGGTCCAGCTaGACAGTGAGCAGGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRASHRSS*TVSRWI Trigger: GATCCACCTGCTCACTGTTCAGCTGGACCTGTGGGA...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTCCTCTTCAGCGCCATaGGTCAGGGATGGCGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVSSSAP*VRDGGG Trigger: CCCACCGCCATCCCTGACCCATGGCGCTGAAGAGGA...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | TCTACAGAATATCCTAAGACAAGGGAGACACAGTTAATTCACTTAATTATCAGCTCCCACAGGTCCAGCTaGACAGTGAGCAGGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: STEYPKTRETQLIHLIISSHRSS*TVSRWI Trigger: GATCCACCTGCTCACTGTTCAGCTGGACCTGTGGGA...GCTGATAATTAAGTGAATTAACTGTGTCTCCCTTGTCTTAGGATATTCTGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR GCA 90 bp | GTCTATAAAGACCTTTCTTTTGGATGGGTGATACTGCCTTATACTCATTTCAGTGACTCCACCTTGATATaGGCTATCAGGAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VYKDLSFGWVILPYTHFSDSTLI*AIRRPH Trigger: ATGGGGCCTCCTGATAGCGCATATCAAGGTGGAGTC...ACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS-3UTR GCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCAGACTCCACCTTGATATaGGCTATCAGGAGTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: ATAIIRRATTVLKNDTHSDSTLI*AIRSHL Trigger: GAGATGACTCCTGATAGCGCATATCAAGGTGGAGTC...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | TCTACAGAATATCCTAAGACAAGGGAGACACAGTTAATTCACTTAATTATCAGCAAGAAGACTCCACCTTaGTATGCGCTATCAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: STEYPKTRETQLIHLIISKKTPP*YALSGG Trigger: GCCTCCTGATAGCGCATATCAAGGTGGAGTCTTCTT...GCTGATAATTAAGTGAATTAACTGTGTCTCCCTTGTCTTAGGATATTCTGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS-3UTR TCA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTAAGAAGACTCCACCTTaGTATGCGCTATCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: HILTYFYSYCNNQKGYNCKKTPP*YALSGV Trigger: GACTCCTGATAGCGCATATCAAGGTGGAGTCTTCTT...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCATCGGAAAATGTACAGTaGGAAAGAAGACTCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: ATAIIRRATTVLKNDTHSSENVQ*ERRLHL Trigger: AAGGTGGAGTCTTCTTTCTCACTGTACATTTTCCGA...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTTCGGAAAATGTACAGTaGGAAAGAAGACTCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRASENVQ*ERRLHL Trigger: AAGGTGGAGTCTTCTTTCTCACTGTACATTTTCCGA...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | TCTACAGAATATCCTAAGACAAGGGAGACACAGTTAATTCACTTAATTATCAGCATAGTGGCTTGCCAGTaGAACAAGTCATCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: STEYPKTRETQLIHLIISIVACQ*NKSSPT Trigger: TGTGGGAGATGACTTGTTCCACTGGCAAGCCACTAT...GCTGATAATTAAGTGAATTAACTGTGTCTCCCTTGTCTTAGGATATTCTGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS-3UTR TCA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTTACATTGCATATTTCTaGGTCCATTCTCTTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: THHIFLHTSTATAIIRRAYIAYF*VHSLAC Trigger: ACATGCAAGAGAATGGACTCAGAAATATGCAATGTA...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR GCA 90 bp | GTCTATAAAGACCTTTCTTTTGGATGGGTGATACTGCCTTATACTCATTTCAGTTACTTCTACAGCTACTaGAATAATCAGAAGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VYKDLSFGWVILPYTHFSYFYSY*NNQKGY Trigger: GTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTA...ACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | GTCTATAAAGACCTTTCTTTTGGATGGGTGATACTGCCTTATACTCATTTCAGTTACATTGCATATTTCTaGGTCCATTCTCTTGCATGT | + |
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Preference number: 4 (lower is better) Translates to: VYKDLSFGWVILPYTHFSYIAYF*VHSLAC Trigger: ACATGCAAGAGAATGGACTCAGAAATATGCAATGTA...ACTGAAATGAGTATAAGGCAGTATCACCCATCCAAAAGAAAGGTCTTTATAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR GCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTACTTCTACAGCTACTaGAATAATCAGAAGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVYFYSY*NNQKGY Trigger: GTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTA...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR TCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTTTCTTTTGGATGGGTaGTACTGCCTTATACTCATT | + |
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Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVFLLDG*YCLILI Trigger: AATGAGTATAAGGCAGTATCACCCATCCAAAAGAAA...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTTAATTATCAGCCGTTaGGGTTTTTCAATACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVLIISR*GFSILF Trigger: GAACAGTATTGAAAAACCCCAACGGCTGATAATTAA...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTTCAATTACATCAGGGTaGGGGCATTTTAATGAATTA | + |
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Preference number: 4 (lower is better) Translates to: IFLHTSTATAIIRRATTVSITSG*GHFNEL Trigger: TAATTCATTAAAATGCCCCCACCCTGATGTAATTGA...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CCA 90 bp | TCTACAGAATATCCTAAGACAAGGGAGACACAGTTAATTCACTTAATTATCAGCTCAATTACATCAGGGTaGGGGCATTTTAATGAATTA | + |
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Preference number: 4 (lower is better) Translates to: STEYPKTRETQLIHLIISSITSG*GHFNEL Trigger: TAATTCATTAAAATGCCCCCACCCTGATGTAATTGA...GCTGATAATTAAGTGAATTAACTGTGTCTCCCTTGTCTTAGGATATTCTGTAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS GCA 90 bp | TTAGCCGCTCCCTGGCTCGCTCCGGGCGCCGGTCCCTGCTCCGTGTaGGCCCGAGCGCGAGTGTGCGCGAGTGTGCGGGCGGGGACGCCG | + |
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Preference number: 5 (lower is better) Translates to: LAAPWLAPGAGPCSV*ARARVCASVRAGTP Trigger: CGGCGTCCCCGCCCGCACACTCGCGCACACTCGCGCTCGGGCGCACACGGAGCAGGGACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS GCA 90 bp | GGTCCCCGGTTAGCCGCTCCCTGGCTCGCTCCGGGCGCCGGTCCCTaGTCCGTGTGCGCCCGAGCGCGAGTGTGCGCGAGTGTGCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GPRLAAPWLAPGAGP*SVCARARVCASVRA Trigger: CGCCCGCACACTCGCGCACACTCGCGCTCGGGCGCACACGGAGCAGGGACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAACCGGGGACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS CCA 90 bp | CAGCTAGGCTGGCTCCGCGCGGTGGGTCCCCGGTTAGCCGCTCCCTaGCTCGCTCCGGGCGCCGGTCCCTGCTCCGTGTGCGCCCGAGCG | + |
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Preference number: 5 (lower is better) Translates to: QLGWLRAVGPRLAAP*LAPGAGPCSVCARA Trigger: CGCTCGGGCGCACACGGAGCAGGGACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAACCGGGGACCCACCGCGCGGAGCCAGCCTAGCTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS CCA 90 bp | TCAGGGGCGTGGGTCGTCGCGGGTTGGGCTCGCTGGCAGCTAGGCTaGCTCCGCGCGGTGGGTCCCCGGTTAGCCGCTCCCTGGCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: SGAWVVAGWARWQLG*LRAVGPRLAAPWLA Trigger: AGCGAGCCAGGGAGCGGCTAACCGGGGACCCACCGCGCGGAGCCAGCCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCACGCCCCTGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCAGTGGGTCGTCGCGGGTaGGGCTCGCTGGCAGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ATAIIRRATTVLKNDTHSVGRRG*GSLAAR Trigger: CCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCAC...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTGTGGGTCGTCGCGGGTaGGGCTCGCTGGCAGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: HILTYFYSYCNNQKGYNCVGRRG*GSLAAR Trigger: CCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCAC...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | TCTACAGAATATCCTAAGACAAGGGAGACACAGTTAATTCACTTAATTATCAGCCCCCATAATAGTGGCTaGCCAGTGGAACAAGTCATC | + |
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Preference number: 5 (lower is better) Translates to: STEYPKTRETQLIHLIISPHNSG*PVEQVI Trigger: GATGACTTGTTCCACTGGCAAGCCACTATTATGGGG...GCTGATAATTAAGTGAATTAACTGTGTCTCCCTTGTCTTAGGATATTCTGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS-3UTR CAA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTAAAGAAGACTCCACCTaGATATGCGCTATCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: HILTYFYSYCNNQKGYNCKEDST*ICAIRR Trigger: CCTCCTGATAGCGCATATCAAGGTGGAGTCTTCTTT...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS-3UTR CAA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTGACACTCACTCAAGGTaGACAAGCATGCTAAACATT | + |
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Preference number: 5 (lower is better) Translates to: THHIFLHTSTATAIIRRADTHSR*TSMLNI Trigger: AATGTTTAGCATGCTTGTCAACCTTGAGTGAGTGTC...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTAAAGAAGACTCCACCTaGATATGCGCTATCAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HILTYFYSYCNNQKGYNCKEDST*ICAIRS Trigger: ACTCCTGATAGCGCATATCAAGGTGGAGTCTTCTTT...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | GCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAAAAATGACACTCACTCATGGACAATAAAACTTTaGATACAGTCAGAGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ATAIIRRATTVLKNDTHSWTIKL*IQSELV Trigger: CACCAGCTCTGACTGTATCAAAAGTTTTATTGTCCA...TGAGTGAGTGTCATTTTTAAGAACAGTTGTAGCCCTTCTGATTATTGCAGTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | ACCCATCACATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTCTTAATTATCAGCCGTaGGGGTTTTTCAATACTGTT | + |
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Preference number: 5 (lower is better) Translates to: THHIFLHTSTATAIIRRALNYQP*GFFNTV Trigger: AACAGTATTGAAAAACCCCAACGGCTGATAATTAAG...AGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | CATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTAGTGATTTAAATGCTTaGCTAATGACTACACCCATC | + |
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Preference number: 5 (lower is better) Translates to: HILTYFYSYCNNQKGYNCSDLNA*LMTTPI Trigger: GATGGGTGTAGTCATTAGCAAAGCATTTAAATCACT...ACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTCTTAATTATCAGCCGTaGGGGTTTTTCAATACTGTT | + |
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Preference number: 5 (lower is better) Translates to: IFLHTSTATAIIRRATTVLNYQP*GFFNTV Trigger: AACAGTATTGAAAAACCCCAACGGCTGATAATTAAG...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS-3UTR CAA 90 bp | ATATTCTTACATACTTCTACAGCTACTGCAATAATCAGAAGGGCTACAACTGTTAGTGATTTAAATGCTTaGCTAATGACTACACCCATC | + |
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Preference number: 5 (lower is better) Translates to: IFLHTSTATAIIRRATTVSDLNA*LMTTPI Trigger: GATGGGTGTAGTCATTAGCAAAGCATTTAAATCACT...AACAGTTGTAGCCCTTCTGATTATTGCAGTAGCTGTAGAAGTATGTAAGAATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS GCA 72 bp | CCCTGGCTCGCTCCGGGCGCCGGTCCCTGCTCCGTGTaGGCCCGAGCGCGAGTGTGCGCGAGTGTGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PWLAPGAGPCSV*ARARVCASVRA Trigger: CGCCCGCACACTCGCGCACACTCGCGCTCGGGCGCACACGGAGCAGGGACCGGCGCCCGGAGCGAGCCAGGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS GCA 72 bp | GCCGGTCCCTGCTCCGTGTGCGCCCGAGCGCGAGTGTaGGCGAGTGTGCGGGCGGGGACGCCGGCGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: AGPCSVCARARV*ASVRAGTPARL Trigger: GAGTCTCGCCGGCGTCCCCGCCCGCACACTCGCGCACACTCGCGCTCGGGCGCACACGGAGCAGGGACCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS CCA 72 bp | TGGCTCCGCGCGGTGGGTCCCCGGTTAGCCGCTCCCTaGCTCGCTCCGGGCGCCGGTCCCTGCTCCGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: WLRAVGPRLAAP*LAPGAGPCSVC Trigger: GCACACGGAGCAGGGACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAACCGGGGACCCACCGCGCGGAGCCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS CCA 72 bp | CGGCTGCGGGGCTCAGGGGCGTGGGTCGTCGCGGGTTaGGCTCGCTGGCAGCTAGGCTGGCTCCGCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RLRGSGAWVVAG*ARWQLGWLRAV Trigger: CACCGCGCGGAGCCAGCCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCACGCCCCTGAGCCCCGCAGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS GCA 72 bp | TTAGCCGCTCCCTGGCTCGCTCCGGGCGCCGGTCCCTaGTCCGTGTGCGCCCGAGCGCGAGTGTGCGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: LAAPWLAPGAGP*SVCARARVCAS Trigger: ACTCGCGCACACTCGCGCTCGGGCGCACACGGAGCAGGGACCGGCGCCCGGAGCGAGCCAGGGAGCGGCTAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS CCA 72 bp | TGGGTCGTCGCGGGTTGGGCTCGCTGGCAGCTAGGCTaGCTCCGCGCGGTGGGTCCCCGGTTAGCCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: WVVAGWARWQLG*LRAVGPRLAAP Trigger: GGGAGCGGCTAACCGGGGACCCACCGCGCGGAGCCAGCCTAGCTGCCAGCGAGCCCAACCCGCGACGACCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373910.9 ENST00000615793.1 |
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| CDS CAA 72 bp | TTGATATGCGCTATCAGGAGGCCCCATAATAGTGGCTaGCCAGTGGAACAAGTCATCTCCCACAGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LICAIRRPHNSG*PVEQVISHRSS Trigger: GCTGGACCTGTGGGAGATGACTTGTTCCACTGGCAAGCCACTATTATGGGGCCTCCTGATAGCGCATATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS TCA 72 bp | TGGAACAAGTCATCTCCCACAGGTCCAGCTGAACAGTaGGCAGGTGGATCGCGCTGTAGATCACTCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: WNKSSPTGPAEQ*AGGSRCRSLNS Trigger: AGAATTGAGTGATCTACAGCGCGATCCACCTGCTCACTGTTCAGCTGGACCTGTGGGAGATGACTTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS TCA 72 bp | TATCAGGAGTCATCTCCCACAGGTCCAGCTGAACAGTaGGCAGGTGGATCGCGCTGTAGATCACTCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: YQESSPTGPAEQ*AGGSRCRSLNS Trigger: AGAATTGAGTGATCTACAGCGCGATCCACCTGCTCACTGTTCAGCTGGACCTGTGGGAGATGACTCCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS TCA 72 bp | GTCGGAAAATGTACAGTGAGAAAGAAGACTCCACCTTaGTATGCGCTATCAGGAGTCATCTCCCACAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VGKCTVRKKTPP*YALSGVISHRS Trigger: GGACCTGTGGGAGATGACTCCTGATAGCGCATATCAAGGTGGAGTCTTCTTTCTCACTGTACATTTTCCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS TCA 72 bp | GTCGGAAAATGTACAGTGAGAAAGAAGACTCCACCTTaGTATGCGCTATCAGGAGGCCCCATAATAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VGKCTVRKKTPP*YALSGGPIIVA Trigger: AGCCACTATTATGGGGCCTCCTGATAGCGCATATCAAGGTGGAGTCTTCTTTCTCACTGTACATTTTCCGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS CAA 72 bp | TGTCGGAAAATGTACAGTGAGAAAGAAGACTCCACCTaGATATGCGCTATCAGGAGGCCCCATAATAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: CRKMYSEKEDST*ICAIRRPHNSG Trigger: GCCACTATTATGGGGCCTCCTGATAGCGCATATCAAGGTGGAGTCTTCTTTCTCACTGTACATTTTCCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373910.9 |
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| CDS CAA 72 bp | TGTCGGAAAATGTACAGTGAGAAAGAAGACTCCACCTaGATATGCGCTATCAGGAGTCATCTCCCACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CRKMYSEKEDST*ICAIRSHLPQV Trigger: GACCTGTGGGAGATGACTCCTGATAGCGCATATCAAGGTGGAGTCTTCTTTCTCACTGTACATTTTCCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615793.1 |
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| CDS CAA 72 bp | GGTCAGTTTGGATGGGTACGAGAGAACTCCTCTTCCTaGGAGAAGATAAGCAATATATATTTAATACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GQFGWVRENSSS*EKISNIYLILS Trigger: GGAAAGTATTAAATATATATTGCTTATCTTCTCCAAGGAAGAGGAGTTCTCTCGTACCCATCCAAACTGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606483.1 |
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| CDS TCA 72 bp | AACCAGCTTCTAACAGAAATTTACAAAAGCCAATCCTaGAGGAGCATTATCTACAAATTGCAAATGAACCTA | + |
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Preference number: 6 (lower is better) Translates to: NQLLTEIYKSQS*RSIIYKLQMNL Trigger: TAGGTTCATTTGCAATTTGTAGATAATGCTCCTTCAGGATTGGCTTTTGTAAATTTCTGTTAGAAGCTGGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606483.1 |
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