RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBE2A (Homo sapiens)

Ensembl gene IDs: ENSG00000077721

Ensembl transcript IDs: ENST00000346330.6, ENST00000371558.7, ENST00000371569.6, ENST00000469205.2, ENST00000625379.1, ENST00000625938.2, ENST00000628549.1, ENST00000628734.1, ENST00000629303.2, ENST00000630695.2, ENST00000631185.2

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTTGTCCGGCGGAAATTCAAGCATACATTTGGAGAGGACCTCGTaGTGTGTCAGATTGGCATGTCCTCCTATGAATTTCCTCCAGCTC +
Preference number: 1 (lower is better)
Translates to: ELSGGNSSIHLERTS*CVRLACPPMNFLQL
Trigger: GAGCTGGAGGAAATTCATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCTTGAATTTCCGCCGGACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR GCA 90 bp CCCAGTCAGCAGCTTGCAAAGAGAGGATGTGTCAGTTACTACAATTaGTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTCTTGCC +
Preference number: 1 (lower is better)
Translates to: PSQQLAKRGCVSYYN*CTPLAESFNFLLLA
Trigger: GGCAAGAAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGACACATCCTCTCTTTGCAAGCTGCTGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR CCA 90 bp ATGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATaGGTCCAGGGATCGAGCTACAGAGCTAGCTGTAAAACTCTTGCA +
Preference number: 1 (lower is better)
Translates to: MPKYLLNYRLCWQQE*VQGSSYRASCKTLA
Trigger: TGCAAGAGTTTTACAGCTAGCTCTGTAGCTCGATCCCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR GCA 90 bp ATGCCAAATCGCACATGGCGTTGTCGAGTGTTTTTACAAGATCACTaGTTAGCTGAAGGTTATGGAACCAAGAAAACAAGTAAACATGCA +
Preference number: 1 (lower is better)
Translates to: MPNRTWRCRVFLQDH*LAEGYGTKKTSKHA
Trigger: TGCATGTTTACTTGTTTTCTTGGTTCCATAACCTTCAGCTAAGCAGTGATCTTGTAAAAACACTCGACAACGCCATGTGCGATTTGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CCA 90 bp AAGATGTCAATTGAATACAAATATGAGATGATGCCAAATCGCACATaGCGTTGTCGAGTGTTTTTACAAGATCACTGCTTAGCTGAAGGT +
Preference number: 1 (lower is better)
Translates to: KMSIEYKYEMMPNRT*RCRVFLQDHCLAEG
Trigger: ACCTTCAGCTAAGCAGTGATCTTGTAAAAACACTCGACAACGCCATGTGCGATTTGGCATCATCTCATATTTGTATTCAATTGACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR TCA 90 bp ATTCTGCCTCATTCAACAAGATGTCAATTGAATACAAATATGAGATaGTGCCAAATCGCACATGGCGTTGTCGAGTGTTTTTACAAGATC +
Preference number: 1 (lower is better)
Translates to: ILPHSTRCQLNTNMR*CQIAHGVVECFYKI
Trigger: GATCTTGTAAAAACACTCGACAACGCCATGTGCGATTTGGCATCATCTCATATTTGTATTCAATTGACATCTTGTTGAATGAGGCAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CCA 90 bp GTAGCCGAGAAGCAGTATTTTATTGAAAAATTAACGGCGACAATCTaGAAGAACCTTTCTAATCCAGAAATGACTTCTGGATCTGATAAA +
Preference number: 1 (lower is better)
Translates to: VAEKQYFIEKLTATI*KNLSNPEMTSGSDK
Trigger: TTTATCAGATCCAGAAGTCATTTCTGGATTAGAAAGGTTCTTCCAGATTGTCGCCGTTAATTTTTCAATAAAATACTGCTTCTCGGCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR TCA 90 bp TGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATGGGTCCAGGAATTTCCTCCAGCTCTaGAGCCACCAGAAGACCTGG +
Preference number: 2 (lower is better)
Translates to: CQNIYLTTGYAGSKNGSRNFLQL*SHQKTW
Trigger: CCAGGTCTTCTGGTGGCTTCAGAGCTGGAGGAAATT...CCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR CCA 90 bp CCTGAGTATATATATGCTCCTTTAAAGGAAATTCCTCCTGCCGACATCCCCAAAAAGACCTGGTGGTGCTaGGTAAAGATGCTTCCGGGC +
Preference number: 2 (lower is better)
Translates to: PEYIYAPLKEIPPADIPKKTWWC*VKMLPG
Trigger: GCCCGGAAGCATCTTTACCCAGCACCACCAGGTCTT...TTTGGGGATGTCGGCAGGAGGAATTTCCTTTAAAGGAGCATATATATACTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CAA 90 bp AACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACATTaGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATG +
Preference number: 2 (lower is better)
Translates to: NVLKLELSGGNSSIH*ERTSWCVRLACPPM
Trigger: CATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCTTGAATTTCCGCCGGACAACTCTAACTTCAATACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR TCA 90 bp TTCAAGCATACATTTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCAGATCACTGCTTAGCTaGAGGTTATGGAACCAAGAA +
Preference number: 2 (lower is better)
Translates to: FKHTFGEDLVVCQIGMSSRSLLS*RLWNQE
Trigger: TTCTTGGTTCCATAACCTTCAGCTAAGCAGTGATCT...GGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CAA 90 bp AAGAATGGGTCCAGGGATCGAGCTACAGAGCTAGCTGTAAAACTCTaGCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAG +
Preference number: 2 (lower is better)
Translates to: KNGSRDRATELAVKL*QKRIEVRVVRRKFK
Trigger: CTTGAATTTCCGCCGGACAACTCTAACTTCAATACGTTTCTGCAAGAGTTTTACAGCTAGCTCTGTAGCTCGATCCCTGGACCCATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR CCA 90 bp AATCCTGAGTATATATATGCTCCTTTAAAGGAAATTCCTCCTGCCGACATCCCCTTGGAGAGGACCTCGTaGTGTGTCAGATTGGCATGT +
Preference number: 2 (lower is better)
Translates to: NPEYIYAPLKEIPPADIPLERTS*CVRLAC
Trigger: ACATGCCAATCTGACACACCACGAGGTCCTCTCCAA...GGGGATGTCGGCAGGAGGAATTTCCTTTAAAGGAGCATATATATACTCAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR GCA 90 bp CTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCGTCAGTTACTACAATTaGTGTACTCCTTTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: LSLAQKLTIVSIPLLPHLVSYYN*CTPLAE
Trigger: CTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC...GAGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR CCA 90 bp ACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTAATAATTCTGAAACTTaGCATGAGTGTGCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: TFPSSKTHDCFHSSAPTPNNSET*HECAQS
Trigger: TGACTGGGCACACTCATGCCAAGTTTCAGAATTATT...AGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR TCA 90 bp TGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATGGGTCCAGGAATACAAATATGAGATaGTGCCAAATCGCACATGGC +
Preference number: 2 (lower is better)
Translates to: CQNIYLTTGYAGSKNGSRNTNMR*CQIAHG
Trigger: GCCATGTGCGATTTGGCATCATCTCATATTTGTATT...CCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR CCA 90 bp CCTGAGTATATATATGCTCCTTTAAAGGAAATTCCTCCTGCCGACATCCCCAAAATGCCAAATCGCACATaGCGTTGTCGAGTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: PEYIYAPLKEIPPADIPKMPNRT*RCRVFL
Trigger: TAAAAACACTCGACAACGCCATGTGCGATTTGGCAT...TTTGGGGATGTCGGCAGGAGGAATTTCCTTTAAAGGAGCATATATATACTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR TCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 2 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
3UTR-3UTR TCA 90 bp ACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 2 (lower is better)
Translates to: TSKSNTSEGPARMKHFSNTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...ATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR TCA 90 bp AACTTTCTCCTTCTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCAAGGACCAGCCAGGATaGAACACTTCAGCAATCATT +
Preference number: 2 (lower is better)
Translates to: NFLLLASKYYVVIHMTEIKDQPG*NTSAII
Trigger: AATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTT...GATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAGAAGGAGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR TCA 90 bp CTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCTTAGTATCACAGAAGGACCAGCCAGGATaGAACACTTCAGCAATCATT +
Preference number: 2 (lower is better)
Translates to: LASKYYVVIHMTEILVSQKDQPG*NTSAII
Trigger: AATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTT...CTGTGATACTAAGATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR CCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTAATAATTCTGAAACTTaGCATGAGTGTGCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: RLKELQLSLAQKLTIVSINNSET*HECAQS
Trigger: TGACTGGGCACACTCATGCCAAGTTTCAGAATTATT...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR TCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCAGGTACAGTACATTTaGTTTCATAGAGGGTGTTTT +
Preference number: 2 (lower is better)
Translates to: RLKELQLSLAQKLTIVSIQVQYI*FHRGCF
Trigger: AAAACACCCTCTATGAAATCAAATGTACTGTACCTG...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR-3UTR TCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 2 (lower is better)
Translates to: ILVIKLSISTSCITIHLKTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
3UTR-3UTR TCA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 2 (lower is better)
Translates to: NNILVIKLSISTSCITIHTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
3UTR-3UTR CAA 90 bp ACCACATCACAGCAGGCAAACTCTCAGTCAACTCCTGAGCCTTCACCATCACAGGTATTGAAGTTAGAGTaGTCCGGCGGAAATTCAAGC +
Preference number: 3 (lower is better)
Translates to: TTSQQANSQSTPEPSPSQVLKLE*SGGNSS
Trigger: GCTTGAATTTCCGCCGGACAACTCTAACTTCAATAC...CTGTGATGGTGAAGGCTCAGGAGTTGACTGAGAGTTTGCCTGCTGTGATGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR CAA 90 bp GTGTGTCAGATTGGCATGTCCTCCTATGAATTTCCTCCAGCTCTGAAGCCACCAAAATCGCACATGGCGTaGTCGAGTGTTTTTACAAGA +
Preference number: 3 (lower is better)
Translates to: VCQIGMSSYEFPPALKPPKSHMA*SSVFTR
Trigger: TCTTGTAAAAACACTCGACAACGCCATGTGCGATTT...TGGTGGCTTCAGAGCTGGAGGAAATTCATAGGAGGACATGCCAATCTGACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CCA 72 bp GGCGGAAATTCAAGCATACATTTGGAGAGGACCTCGTaGTGTGTCAGATTGGCATGTCCTCCTATGAATTTC +
Preference number: 3 (lower is better)
Translates to: GGNSSIHLERTS*CVRLACPPMNF
Trigger: GAAATTCATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCTTGAATTTCCGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CCA 72 bp TATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATaGGTCCAGGGATCGAGCTACAGAGCTAGCTGTAAA +
Preference number: 3 (lower is better)
Translates to: YLLNYRLCWQQE*VQGSSYRASCK
Trigger: TTTACAGCTAGCTCTGTAGCTCGATCCCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR-3UTR CAA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTTGCCCAGTCAGCAGCTaGCAAAGAGAGGATGTGTCA +
Preference number: 3 (lower is better)
Translates to: RLKELQLSLAQKLTIVSICPVSS*QREDVS
Trigger: TGACACATCCTCTCTTTGCAAGCTGCTGACTGGGCA...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
3UTR GCA 72 bp AAACTTCTAACTGATGGCTATGCTTGTGAAGTTAGATaGCAAAATATCTACTTAACTACAGGTTATGCTGGC +
Preference number: 3 (lower is better)
Translates to: KLLTDGYACEVR*QNIYLTTGYAG
Trigger: GCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCATCTAACTTCACAAGCATAGCCATCAGTTAGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CCA 72 bp ATTGAATACAAATATGAGATGATGCCAAATCGCACATaGCGTTGTCGAGTGTTTTTACAAGATCACTGCTTA +
Preference number: 3 (lower is better)
Translates to: IEYKYEMMPNRT*RCRVFLQDHCL
Trigger: TAAGCAGTGATCTTGTAAAAACACTCGACAACGCCATGTGCGATTTGGCATCATCTCATATTTGTATTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CCA 72 bp AAGCAGTATTTTATTGAAAAATTAACGGCGACAATCTaGAAGAACCTTTCTAATCCAGAAATGACTTCTGGA +
Preference number: 3 (lower is better)
Translates to: KQYFIEKLTATI*KNLSNPEMTSG
Trigger: TCCAGAAGTCATTTCTGGATTAGAAAGGTTCTTCCAGATTGTCGCCGTTAATTTTTCAATAAAATACTGCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp AGCATACATTTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATGGCCGCCGAGCCGGGGTaGACATGTCGCGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SIHLERTSWCVRLACPPMAAEPG*TCRERG
Trigger: ACCCCGCTCGCGACATGTCCACCCCGGCTCGGCGGC...CATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp TATTTTGACAGTGGGAACCCTGCCCCAAGCACCACATCACAGCAGGCAAACTCTGGGTGGGGCATACACTaGGGTCTCGGGTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: YFDSGNPAPSTTSQQANSGWGIH*GLGFPR
Trigger: CCGCGGGAACCCGAGACCCCAGTGTATGCCCCACCC...AGAGTTTGCCTGCTGTGATGTGGTGCTTGGGGCAGGGTTCCCACTGTCAAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATTCGGGACCCGCCCTGTaGCCCAGCTCGCAACCCCCG +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDSGPAL*PSSQPP
Trigger: CGGGGGTTGCGAGCTGGGGCACAGGGCGGGTCCCGA...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628549.1
CDS-3UTR CCA 90 bp ACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATGCCGCCGAGCCGGGGTaGACATGTCGCGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: TSKSNTSEGPARMKHFSNAAEPG*TCRERG
Trigger: ACCCCGCTCGCGACATGTCCACCCCGGCTCGGCGGC...ATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGGCCGCCGAGCCGGGGTaGACATGTCGCGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWAAEPG*TCRERG
Trigger: ACCCCGCTCGCGACATGTCCACCCCGGCTCGGCGGC...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR CCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTGCCGCCGAGCCGGGGTaGACATGTCGCGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLAAEPG*TCRERG
Trigger: ACCCCGCTCGCGACATGTCCACCCCGGCTCGGCGGC...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTGCCGCCGAGCCGGGGTaGACATGTCGCGAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFAAEPG*TCRERG
Trigger: ACCCCGCTCGCGACATGTCCACCCCGGCTCGGCGGC...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp CTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: LSLAQKLTIVSIPLLPHLPADSG*RILLQP
Trigger: AGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGG...GAGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000625938.2
CDS-3UTR CCA 90 bp ACATTCACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCGGGTGGGGCATACACTaGGGTCTCGGGTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: TFTSKSNTSEGPARMKHFGWGIH*GLGFPR
Trigger: CCGCGGGAACCCGAGACCCCAGTGTATGCCCCACCC...GAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGGGGTGGGGCATACACTaGGGTCTCGGGTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWGWGIH*GLGFPR
Trigger: CCGCGGGAACCCGAGACCCCAGTGTATGCCCCACCC...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR CCA 90 bp CTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCCCCGCTGACTCCGGCTaGAGGATCCTCCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LSLAQKLTIVSIPLLPHLPADSG*RILLLK
Trigger: CTTCAAGAGGAGGATCCTCCAGCCGGAGTCAGCGGG...GAGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630695.2
CDS-3UTR TCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGGCACTCCAGCCTGGGTaGCAGGGCGCAACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWALQPG*QGATPS
Trigger: TGACGGAGTTGCGCCCTGTCACCCAGGCTGGAGTGC...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR GCA 90 bp ACCACATCACAGCAGGCAAACTCTCAGTCAACTCCTGAGCCTTCACCATCACAGCAGAAGACCTGGTGGTaGTGGGTAAAGATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: TTSQQANSQSTPEPSPSQQKTWW*WVKMLP
Trigger: CGGAAGCATCTTTACCCAGCACCACCAGGTCTTCTG...CTGTGATGGTGAAGGCTCAGGAGTTGACTGAGAGTTTGCCTGCTGTGATGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTGGGTGGGGCATACACTaGGGTCTCGGGTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFGWGIH*GLGFPR
Trigger: CCGCGGGAACCCGAGACCCCAGTGTATGCCCCACCC...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp AATCCTGAGTATATATATGCTCCTTTAAAGGAAATTCCTCCTGCCGACATCCCCCCAGAGGAACCGCGCTaGCTCTCCGAAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: NPEYIYAPLKEIPPADIPPEEPR*LSEVEG
Trigger: ACCCTCGACTTCGGAGAGGCAGCGCGGTTCCTCTGG...GGGGATGTCGGCAGGAGGAATTTCCTTTAAAGGAGCATATATATACTCAGGATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTGGGTGGGGCATACACTaGGGTCTCGGGTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: RLKELQLSLAQKLTIVSIGWGIH*GLGFPR
Trigger: CCGCGGGAACCCGAGACCCCAGTGTATGCCCCACCC...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWPADSG*RILLQP
Trigger: AGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGG...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR CCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGCATCGCACTCCAGCCTaGGTGACAGGGCGCAACTCC +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWHRTPA*VTGRNS
Trigger: GGAGTTGCGCCCTGTCACCCAGGCTGGAGTGCGATG...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR CCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGGGAGGCCGAAGAGGCTaGAGAAGCAGGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWGGRRG*RSRRRG
Trigger: TCCCCTTCTCCTGCTTCTCCAGCCTCTTCGGCCTCC...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR CCA 90 bp CCTGAGTATATATATGCTCCTTTAAAGGAAATTCCTCCTGCCGACATCCCCAAAGGAGGCCGAAGAGGCTaGAGAAGCAGGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PEYIYAPLKEIPPADIPKGGRRG*RSRRRG
Trigger: TCCCCTTCTCCTGCTTCTCCAGCCTCTTCGGCCTCC...TTTGGGGATGTCGGCAGGAGGAATTTCCTTTAAAGGAGCATATATATACTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp GATTCATCAGGATTCATTCTCACAAAAGACCAGCCTGTAACAGCCAACATGTATCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: DSSGFILTKDQPVTANMYPADSG*RILLQP
Trigger: AGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGG...ATACATGTTGGCTGTTACAGGCTGGTCTTTTGTGAGAATGAATCCTGATGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCAGAGGAACCGCGCTaGCTCTCCGAAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RLKELQLSLAQKLTIVSIPEEPR*LSEVEG
Trigger: ACCCTCGACTTCGGAGAGGCAGCGCGGTTCCTCTGG...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTGGAGGCCGAAGAGGCTaGAGAAGCAGGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFGGRRG*RSRRRG
Trigger: TCCCCTTCTCCTGCTTCTCCAGCCTCTTCGGCCTCC...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp GGTTATGGAACCAAGAAAACAAGTAAACATGCAGCTGCCGACGAGGCTTTGAAATGCTGGCAGCAAGAATaGGTCCAGGGATCGAGCTAC +
Preference number: 4 (lower is better)
Translates to: GYGTKKTSKHAAADEALKCWQQE*VQGSSY
Trigger: GTAGCTCGATCCCTGGACCCATTCTTGCTGCCAGCA...TTTCAAAGCCTCGTCGGCAGCTGCATGTTTACTTGTTTTCTTGGTTCCATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
3UTR CAA 72 bp TCCAGGGATCGAGCTACAGAGCTAGCTGTAAAACTCTaGCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SRDRATELAVKL*QKRIEVRVVRR
Trigger: CCGCCGGACAACTCTAACTTCAATACGTTTCTGCAAGAGTTTTACAGCTAGCTCTGTAGCTCGATCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp TCTGAAACTTGGCATGAGTGTGCCCAGTCAGCAGCTTGCAAAGAGAGGATGTGTAAGGACCAGCCAGGATaGAACACTTCAGCAATCATT +
Preference number: 4 (lower is better)
Translates to: SETWHECAQSAACKERMCKDQPG*NTSAII
Trigger: AATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTT...ACACATCCTCTCTTTGCAAGCTGCTGACTGGGCACACTCATGCCAAGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp AGCATACATTTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATGGTCAAAAGTTCACAATaGCATACAGGCTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: SIHLERTSWCVRLACPPMVKSSQ*HTGSSP
Trigger: GGGTGAAGAGCCTGTATGGCATTGTGAACTTTTGAC...CATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp TTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATGAATTTCCTCAGACACATCATAGGTTaGACTCCAACGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LERTSWCVRLACPPMNFLRHIIG*TPTVLK
Trigger: CTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCT...GAGGAAATTCATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp CTCTTGCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACAAAGACCTGGTGGTGCTaGGTAAAGATGCTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLQKRIEVRVVRRKFKHTKTWWC*VKMLPG
Trigger: GCCCGGAAGCATCTTTACCCAGCACCACCAGGTCTT...TGTATGCTTGAATTTCCGCCGGACAACTCTAACTTCAATACGTTTCTGCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp TGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATGGGTCCAGGAGCCACCAGAAGACCTaGTGGTGCTGGGTAAAGATG +
Preference number: 4 (lower is better)
Translates to: CQNIYLTTGYAGSKNGSRSHQKT*WCWVKM
Trigger: CATCTTTACCCAGCACCACCAGGTCTTCTGGTGGCT...CCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp ACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCTTCAGGCCCGAAAATaGCCGCGTTCCACACCATTA +
Preference number: 4 (lower is better)
Translates to: TSKSNTSEGPARMKHFSNLQARK*PRSTPL
Trigger: TAATGGTGTGGAACGCGGTCATTTTCGGGCCTGAAG...ATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATCTTCAGGCCCGAAAATaGCCGCGTTCCACACCATTA +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDLQARK*PRSTPL
Trigger: TAATGGTGTGGAACGCGGTCATTTTCGGGCCTGAAG...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR TCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGCTTCAGGCCCGAAAATaGCCGCGTTCCACACCATTA +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWLQARK*PRSTPL
Trigger: TAATGGTGTGGAACGCGGTCATTTTCGGGCCTGAAG...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR TCA 90 bp TTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATGAATTTCCTCAGATCACTGCTTAGCTaGAGGTTATGGAACCAAGAA +
Preference number: 4 (lower is better)
Translates to: LERTSWCVRLACPPMNFLRSLLS*RLWNQE
Trigger: TTCTTGGTTCCATAACCTTCAGCTAAGCAGTGATCT...GAGGAAATTCATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp TTTAAAAAGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTCCAGAGGAACCGCGCTaGCTCTCCGAAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: FKKIKGAPTFPSSKTHDCPEEPR*LSEVEG
Trigger: ACCCTCGACTTCGGAGAGGCAGCGCGGTTCCTCTGG...ACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp AACTTTCTCCTTCTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCCCAGAGGAACCGCGCTaGCTCTCCGAAGTCGAGGGT +
Preference number: 4 (lower is better)
Translates to: NFLLLASKYYVVIHMTEIPEEPR*LSEVEG
Trigger: ACCCTCGACTTCGGAGAGGCAGCGCGGTTCCTCTGG...GATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAGAAGGAGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp ACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATGCCCAGTCAGCAGCTTaGAAAGAGAGGATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: TSKSNTSEGPARMKHFSNAQSAA*KERMCQ
Trigger: CTGACACATCCTCTCTTTGCAAGCTGCTGACTGGGC...ATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTGGAGGCCGAAGAGGCTaGAGAAGCAGGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NILVIKLSISTSCITIHLGGRRG*RSRRRG
Trigger: TCCCCTTCTCCTGCTTCTCCAGCCTCTTCGGCCTCC...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: NNILVIKLSISTSCITIHPADSG*RILLQP
Trigger: AGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGG...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
CDS-3UTR CCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAACCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKPADSG*RILLQP
Trigger: AGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGG...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
3UTR CAA 72 bp AAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACATTaGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGT +
Preference number: 4 (lower is better)
Translates to: KLELSGGNSSIH*ERTSWCVRLAC
Trigger: ACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCTTGAATTTCCGCCGGACAACTCTAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTCTTCAGGCCCGAAAATaGCCGCGTTCCACACCATTA +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLLQARK*PRSTPL
Trigger: TAATGGTGTGGAACGCGGTCATTTTCGGGCCTGAAG...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp GTGTGTCAGATTGGCATGTCCTCCTATGAATTTCCTCCAGCTCTGAAGCCACCAAATACAAATATGAGATaGTGCCAAATCGCACATGGC +
Preference number: 4 (lower is better)
Translates to: VCQIGMSSYEFPPALKPPNTNMR*CQIAHG
Trigger: GCCATGTGCGATTTGGCATCATCTCATATTTGTATT...TGGTGGCTTCAGAGCTGGAGGAAATTCATAGGAGGACATGCCAATCTGACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTGCCCAGTCAGCAGCTTaGAAAGAGAGGATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLAQSAA*KERMCQ
Trigger: CTGACACATCCTCTCTTTGCAAGCTGCTGACTGGGC...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATGGAGGCCGAAGAGGCTaGAGAAGCAGGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NNILVIKLSISTSCITIHGGRRG*RSRRRG
Trigger: TCCCCTTCTCCTGCTTCTCCAGCCTCTTCGGCCTCC...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATAGCCTGGCTGTTTGCTaGACTATTGGGATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDSLAVC*TIGIGF
Trigger: GAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCT...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp TATTTTGACAGTGGGAACCCTGCCCCAAGCACCACATCACAGCAGGCAAACTCTATCTGCATAGACATTTaGATGGAACATCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: YFDSGNPAPSTTSQQANSICIDI*MEHLRD
Trigger: GTCTCTAAGATGTTCCATCCAAATGTCTATGCAGAT...AGAGTTTGCCTGCTGTGATGTGGTGCTTGGGGCAGGGTTCCCACTGTCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCTTCAGGCCCGAAAATaGCCGCGTTCCACACCATTA +
Preference number: 4 (lower is better)
Translates to: RLKELQLSLAQKLTIVSILQARK*PRSTPL
Trigger: TAATGGTGTGGAACGCGGTCATTTTCGGGCCTGAAG...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTTTCTCCTGGTACAGCTaGGCAGCCTGGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NILVIKLSISTSCITIHLFSWYS*AAWLFA
Trigger: AGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAA...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp TCTGAAACTTGGCATGAGTGTGCCCAGTCAGCAGCTTGCAAAGAGAGGATGTGTGTATGGATGTTAGAATaGAAGACACATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: SETWHECAQSAACKERMCVWMLE*KTHHRL
Trigger: CAACCTATGATGTGTCTTCCATTCTAACATCCATAC...ACACATCCTCTCTTTGCAAGCTGCTGACTGGGCACACTCATGCCAAGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp GCATGCAGCAATAACTCAGGATTTGAGTGGAAAATAGTTTGCCACAGATATGCTAGCCTGGCTGTTTGCTaGACTATTGGGATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ACSNNSGFEWKIVCHRYASLAVC*TIGIGF
Trigger: GAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCT...AGCATATCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTTATTGCTGCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CCA 90 bp CTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCAATAATTCTGAAACTTaGCATGAGTGTGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LSLAQKLTIVSIPLLPHLNNSET*HECAQS
Trigger: TGACTGGGCACACTCATGCCAAGTTTCAGAATTATT...GAGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp CTCTTGCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACAAACTACAGGTTATGCTaGCAGCAAGAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLQKRIEVRVVRRKFKHTNYRLC*QQEWVQ
Trigger: CTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTT...TGTATGCTTGAATTTCCGCCGGACAACTCTAACTTCAATACGTTTCTGCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAATTCTCCTGGTACAGCTaGGCAGCCTGGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKFSWYS*AAWLFA
Trigger: AGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAA...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR TCA 90 bp TTTAAAAAGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCTCCTGGTACAGCTaGGCAGCCTGGCTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FKKIKGAPTFPSSKTHDCFSWYS*AAWLFA
Trigger: AGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAA...ACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp ACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 4 (lower is better)
Translates to: TFPSSKTHDCFHSSAPTPTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...AGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp AAGATGTCAATTGAATACAAATATGAGATGATGCCAAATCGCACATGGCGTTGTAGCCAACATGTATTTTaGCAGTGGGAACCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KMSIEYKYEMMPNRTWRCSQHVF*QWEPCP
Trigger: GGGGCAGGGTTCCCACTGTCAAAATACATGTTGGCT...ACAACGCCATGTGCGATTTGGCATCATCTCATATTTGTATTCAATTGACATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAGCTGGAGGATCCTCCTaGAACCTTCGGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKAGGSS*NLREDR
Trigger: TCTGTCTTCCCGAAGGTTGCAGGAGGATCCTCCAGC...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628549.1
CDS-3UTR CCA 90 bp GTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACATTTGGAGAGGACCATGCCAAATCGCACATaGCGTTGTCGAGTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VLKLELSGGNSSIHLERTMPNRT*RCRVFL
Trigger: TAAAAACACTCGACAACGCCATGTGCGATTTGGCAT...GGTCCTCTCCAAATGTATGCTTGAATTTCCGCCGGACAACTCTAACTTCAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp TGTGTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTGTACTCCTTTAGCTaGGTCCTTCAACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CVSYYNCCTPLAESFNFLLYSFS*VLQLSP
Trigger: AGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAG...GAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTCTGTACTCCTTTAGCTaGGTCCTTCAACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFLYSFS*VLQLSP
Trigger: AGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAG...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp TACTTAACTACAGGTTATGCTGGCAGCAAGAATGGGTCCAGGGATCGAGCTACAACATATACTACCATCTaGATAGACATTTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: YLTTGYAGSKNGSRDRATTYTTI*IDIWME
Trigger: TTCCATCCAAATGTCTATGCAGATGGTAGTATATGT...TGTAGCTCGATCCCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATAGTTTGCCACAGATATaGTATGCTCCCTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDSLPQI*YAPFLE
Trigger: TTCAAGGAAGGGAGCATAGCATATCTGTGGCAAACT...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR GCA 90 bp ACATTCACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGTTTGCCACAGATATaGTATGCTCCCTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: TFTSKSNTSEGPARMKHFSLPQI*YAPFLE
Trigger: TTCAAGGAAGGGAGCATAGCATATCTGTGGCAAACT...GAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGTGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR GCA 90 bp CTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCTACATGGGTTACTTGTaGAAAGTTAGATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSLAQKLTIVSIPLLPHLYMGYL*KVRFGS
Trigger: ACTTCCAAATCTAACTTTGCACAAGTAACCCATGTA...GAGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTAGACACATCATAGGTTaGACTCCAACGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFRHIIG*TPTVLK
Trigger: CTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCT...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp TGTGTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTGGACTATTGGGATTaGGTTCATCCAACAGAGACT +
Preference number: 4 (lower is better)
Translates to: CVSYYNCCTPLAESFNFLLDYWD*VHPTET
Trigger: AGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAG...GAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp ATCACAGGATTTTTAGCTCCCATGCCTCCTTCAAAATTGTTTACATGGATTTGTAGCCTGGCTGTTTGCTaGACTATTGGGATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ITGFLAPMPPSKLFTWICSLAVC*TIGIGF
Trigger: GAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCT...ACAAATCCATGTAAACAATTTTGAAGGAGGCATGGGAGCTAAAAATCCTGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp GAAGTTAGATGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATTTGGAGAGGACCTCGTaGTGTGTCAGATTGGCATGT +
Preference number: 4 (lower is better)
Translates to: EVRCQNIYLTTGYAGSKNLERTS*CVRLAC
Trigger: ACATGCCAATCTGACACACCACGAGGTCCTCTCCAA...ATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCATCTAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp AACTCTTGCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATAATTCAAGCATACATTTaGAGAGGACCTCGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: NSCRNVLKLELSGGNSSIIQAYI*RGPRGV
Trigger: CACACCACGAGGTCCTCTCCAAATGTATGCTTGAAT...TATGCTTGAATTTCCGCCGGACAACTCTAACTTCAATACGTTTCTGCAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR TCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTAAGGACCAGCCAGGATaGAACACTTCAGCAATCATT +
Preference number: 4 (lower is better)
Translates to: RLKELQLSLAQKLTIVSIKDQPG*NTSAII
Trigger: AATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTT...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp AAGATGTCAATTGAATACAAATATGAGATGATGCCAAATCGCACATGGCGTTGTTGGCATGTCCTCCTATaGATTTCCTCCAGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KMSIEYKYEMMPNRTWRCWHVLL*ISSSSE
Trigger: TTCAGAGCTGGAGGAAATTCATAGGAGGACATGCCA...ACAACGCCATGTGCGATTTGGCATCATCTCATATTTGTATTCAATTGACATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATGTCAGTTACTACAATTaGTGTACTCCTTTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDVSYYN*CTPLAE
Trigger: CTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATTTGTTTCCATTCCTCTaGTCCCACACCTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDLFPFL*SHTSFK
Trigger: TTTAAAAGAGGTGTGGGAGCAGAGGAATGGAAACAA...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp ACATTCACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCTTGTTTCCATTCCTCTaGTCCCACACCTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TFTSKSNTSEGPARMKHFLFPFL*SHTSFK
Trigger: TTTAAAAGAGGTGTGGGAGCAGAGGAATGGAAACAA...GAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCTGGACTATTGGGATTaGGTTCATCCAACAGAGACT +
Preference number: 4 (lower is better)
Translates to: RLKELQLSLAQKLTIVSILDYWD*VHPTET
Trigger: AGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAG...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTTGTTTGCTGGACTATTaGGATTGGGTTCATCCAACA +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFCLLDY*DWVHPT
Trigger: TGTTGGATGAACCCAATCCCAATAGTCCAGCAAACA...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTTGTTTGCTGGACTATTaGGATTGGGTTCATCCAACA +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLCLLDY*DWVHPT
Trigger: TGTTGGATGAACCCAATCCCAATAGTCCAGCAAACA...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATCAGGTACAGTACATTTaGTTTCATAGAGGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDQVQYI*FHRGCF
Trigger: AAAACACCCTCTATGAAATCAAATGTACTGTACCTG...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR TCA 90 bp ACATTCACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCCAGGTACAGTACATTTaGTTTCATAGAGGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: TFTSKSNTSEGPARMKHFQVQYI*FHRGCF
Trigger: AAAACACCCTCTATGAAATCAAATGTACTGTACCTG...GAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTCTGTACTCCTTTAGCTaGGTCCTTCAACTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NILVIKLSISTSCITIHLLYSFS*VLQLSP
Trigger: AGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAG...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTGTCAGTTACTACAATTaGTGTACTCCTTTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFVSYYN*CTPLAE
Trigger: CTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp TGTGTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCGTCAGTTACTACAATTaGTGTACTCCTTTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CVSYYNCCTPLAESFNFLVSYYN*CTPLAE
Trigger: CTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC...GAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp TGTGTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCACATATACTACCATCTaGATAGACATCCTCAAACGG +
Preference number: 4 (lower is better)
Translates to: CVSYYNCCTPLAESFNFLTYTTI*IDILKR
Trigger: CCGTTTGAGGATGTCTATGCAGATGGTAGTATATGT...GAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625938.2
CDS-3UTR GCA 90 bp TATGCTTGTGAAGTTAGATGCCAAAATATCTACTTAACTACAGGTTATGCTGGCCTTAACTACAGGTTATaGTGGCAGCAAGAATGGGTC +
Preference number: 4 (lower is better)
Translates to: YACEVRCQNIYLTTGYAGLNYRL*WQQEWV
Trigger: GACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAG...GCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCATCTAACTTCACAAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATGTATGGATGTTAGAATaGAAGACACATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDVWMLE*KTHHRL
Trigger: CAACCTATGATGTGTCTTCCATTCTAACATCCATAC...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTCCAACAGAGACTGTATaGATGTTAGAATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLPTETV*MLEWKT
Trigger: TGTCTTCCATTCTAACATCCATACAGTCTCTGTTGG...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTCTGGACTATTGGGATTaGGTTCATCCAACAGAGACT +
Preference number: 4 (lower is better)
Translates to: NILVIKLSISTSCITIHLLDYWD*VHPTET
Trigger: AGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAG...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATATCTGCATAGACATTTaGATGGAACATCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDICIDI*MEHLRD
Trigger: GTCTCTAAGATGTTCCATCCAAATGTCTATGCAGAT...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGATCTGCATAGACATTTaGATGGAACATCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWICIDI*MEHLRD
Trigger: GTCTCTAAGATGTTCCATCCAAATGTCTATGCAGAT...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR CCA 90 bp ACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATATCTGCATAGACATTTaGATGGAACATCTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TSKSNTSEGPARMKHFSNICIDI*MEHLRD
Trigger: GTCTCTAAGATGTTCCATCCAAATGTCTATGCAGAT...ATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CCA 90 bp ACATTCACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAACTCAGGATTTGAGTaGAAAATAGTTTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: TFTSKSNTSEGPARMKHFNSGFE*KIVCHR
Trigger: TCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTT...GAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CCA 90 bp GATTCATCAGGATTCATTCTCACAAAAGACCAGCCTGTAACAGCCAACATGTATTTAACGGCGACAATCTaGAAGAACCTTTCTAATCCA +
Preference number: 4 (lower is better)
Translates to: DSSGFILTKDQPVTANMYLTATI*KNLSNP
Trigger: TGGATTAGAAAGGTTCTTCCAGATTGTCGCCGTTAA...ATACATGTTGGCTGTTACAGGCTGGTCTTTTGTGAGAATGAATCCTGATGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR GCA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGACATATACTACCATCTaGATAGACATTTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWTYTTI*IDIWME
Trigger: TTCCATCCAAATGTCTATGCAGATGGTAGTATATGT...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS-3UTR GCA 90 bp GCATGCAGCAATAACTCAGGATTTGAGTGGAAAATAGTTTGCCACAGATATGCTAGCCTTGTCCCATACTaGTACTTAAAGGTACTATAT +
Preference number: 4 (lower is better)
Translates to: ACSNNSGFEWKIVCHRYASLVPY*YLKVLY
Trigger: ATATAGTACCTTTAAGTAGCAGTATGGGACAAGGCT...AGCATATCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTTATTGCTGCATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR GCA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTAGCCTTGTCCCATACTaGTACTTAAAGGTACTATAT +
Preference number: 4 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFSLVPY*YLKVLY
Trigger: ATATAGTACCTTTAAGTAGCAGTATGGGACAAGGCT...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CCA 90 bp AACTTTCTCCTTCTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCAGACACATCATAGGTTaGACTCCAACGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: NFLLLASKYYVVIHMTEIRHIIG*TPTVLK
Trigger: CTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCT...GATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAGAAGGAGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAAGACACATCATAGGTTaGACTCCAACGGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKRHIIG*TPTVLK
Trigger: CTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCT...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp AACTTTCTCCTTCTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCCTGGACTATTGGGATTaGGTTCATCCAACAGAGACT +
Preference number: 4 (lower is better)
Translates to: NFLLLASKYYVVIHMTEILDYWD*VHPTET
Trigger: AGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAG...GATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAGAAGGAGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR GCA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTACATATACTACCATCTaGATAGACATTTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLTYTTI*IDIWME
Trigger: TTCCATCCAAATGTCTATGCAGATGGTAGTATATGT...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR GCA 90 bp GCATGCAGCAATAACTCAGGATTTGAGTGGAAAATAGTTTGCCACAGATATGCTTACATGGGTTACTTGTaGAAAGTTAGATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ACSNNSGFEWKIVCHRYAYMGYL*KVRFGS
Trigger: ACTTCCAAATCTAACTTTGCACAAGTAACCCATGTA...AGCATATCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTTATTGCTGCATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CCA 90 bp GCCGAGAAGCAGTATTTTATTGAAAAATTAACGGCGACAATCTGGAAGAACCTTGTATGGATGTTAGAATaGAAGACACATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: AEKQYFIEKLTATIWKNLVWMLE*KTHHRL
Trigger: CAACCTATGATGTGTCTTCCATTCTAACATCCATAC...AAGGTTCTTCCAGATTGTCGCCGTTAATTTTTCAATAAAATACTGCTTCTCGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CCA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATTGTTTGCTGGACTATTaGGATTGGGTTCATCCAACA +
Preference number: 4 (lower is better)
Translates to: NNILVIKLSISTSCITIHCLLDY*DWVHPT
Trigger: TGTTGGATGAACCCAATCCCAATAGTCCAGCAAACA...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR TCA 90 bp GAAAATAGTTTGCCACAGATATGCTATGCTCCCTTCCTTGAATTCATTAAAACTACAGGAGTAGGGAGGTaGCAAACACATCAATATATA +
Preference number: 4 (lower is better)
Translates to: ENSLPQICYAPFLEFIKTTGVGR*QTHQYI
Trigger: TATATATTGATGTGTTTGTCACCTCCCTACTCCTGT...AGTTTTAATGAATTCAAGGAAGGGAGCATAGCATATCTGTGGCAAACTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR GCA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTGCTTTGTTCTACTATTaGAGAAACACGCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: RLKELQLSLAQKLTIVSIALFYY*RNTLFI
Trigger: TATGAAAAGCGTGTTTCTGCAATAGTAGAACAAAGC...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTGTATGGATGTTAGAATaGAAGACACATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: NILVIKLSISTSCITIHLVWMLE*KTHHRL
Trigger: CAACCTATGATGTGTCTTCCATTCTAACATCCATAC...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp CTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCTTAGTATCACAGCCAACAGAGACTGTATaGATGTTAGAATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LASKYYVVIHMTEILVSQPTETV*MLEWKT
Trigger: TGTCTTCCATTCTAACATCCATACAGTCTCTGTTGG...CTGTGATACTAAGATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCCAACAGAGACTGTATaGATGTTAGAATGGAAGACA +
Preference number: 4 (lower is better)
Translates to: NNILVIKLSISTSCITIHPTETV*MLEWKT
Trigger: TGTCTTCCATTCTAACATCCATACAGTCTCTGTTGG...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAAATAATTCTGAAACTTaGCATGAGTGTGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKNNSET*HECAQS
Trigger: TGACTGGGCACACTCATGCCAAGTTTCAGAATTATT...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp CTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCTTAGTATCACAGAATAATTCTGAAACTTaGCATGAGTGTGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LASKYYVVIHMTEILVSQNNSET*HECAQS
Trigger: TGACTGGGCACACTCATGCCAAGTTTCAGAATTATT...CTGTGATACTAAGATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp ATCACAGGATTTTTAGCTCCCATGCCTCCTTCAAAATTGTTTACATGGATTTGTAACTCAGGATTTGAGTaGAAAATAGTTTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: ITGFLAPMPPSKLFTWICNSGFE*KIVCHR
Trigger: TCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTT...ACAAATCCATGTAAACAATTTTGAAGGAGGCATGGGAGCTAAAAATCCTGTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR TCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAACAGGTACAGTACATTTaGTTTCATAGAGGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKQVQYI*FHRGCF
Trigger: AAAACACCCTCTATGAAATCAAATGTACTGTACCTG...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR TCA 90 bp TTTAAAAAGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTCACTTAGGGCAGCACTaGTCCTTTAAAAAGATTAAA +
Preference number: 4 (lower is better)
Translates to: FKKIKGAPTFPSSKTHDCHLGQH*SFKKIK
Trigger: TTTAATCTTTTTAAAGGATCAGTGCTGCCCTAAGTG...ACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCTTTTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR TCA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCACTTAGGGCAGCACTaGTCCTTTAAAAAGATTAAA +
Preference number: 4 (lower is better)
Translates to: NNILVIKLSISTSCITIHHLGQH*SFKKIK
Trigger: TTTAATCTTTTTAAAGGATCAGTGCTGCCCTAAGTG...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAGTATGGATGTTAGAATaGAAGACACATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKVWMLE*KTHHRL
Trigger: CAACCTATGATGTGTCTTCCATTCTAACATCCATAC...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR GCA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAACATATACTACCATCTaGATAGACATTTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: ILVIKLSISTSCITIHLKTYTTI*IDIWME
Trigger: TTCCATCCAAATGTCTATGCAGATGGTAGTATATGT...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000628549.1
ENST00000630695.2
CDS-3UTR GCA 90 bp TTTAAAAAGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTACATATACTACCATCTaGATAGACATTTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: FKKIKGAPTFPSSKTHDCTYTTI*IDIWME
Trigger: TTCCATCCAAATGTCTATGCAGATGGTAGTATATGT...ACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCTTTTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS CCA 90 bp CCACACCATTATGTTGTTCTCGGACGGAGCCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCTTCGGGAAGACAGACAGGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: PHHYVVLGRSPADSG*RILLQPSGRQTGVP
Trigger: GGGGACCCCTGTCTGTCTTCCCGAAGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACATAATGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628549.1
CDS TCA 90 bp AATGGTCAGTTCCCACTTAAGGGGCCCCCTTCTCCCTGCTTCATCTaGGATGGCTATCCCGAGCTCTGCCATCTCCAGCACCGCTACCGG +
Preference number: 5 (lower is better)
Translates to: NGQFPLKGPPSPCFI*DGYPELCHLQHRYR
Trigger: CCGGTAGCGGTGCTGGAGATGGCAGAGCTCGGGATAGCCATCTCAGATGAAGCAGGGAGAAGGGGGCCCCTTAAGTGGGAACTGACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625379.1
CDS TCA 90 bp GAGGCTAGGCAGAGGCAGGTTCCTAAGCAGGAGACACTTCCAGGATaGCTGGGAACCCTTTCCCCAGATGACCAGGCTCCTGAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: EARQRQVPKQETLPG*LGTLSPDDQAPEKW
Trigger: CCACTTTTCAGGAGCCTGGTCATCTGGGGAAAGGGTTCCCAGTCATCCTGGAAGTGTCTCCTGCTTAGGAACCTGCCTCTGCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469205.2
CDS-3UTR CAA 90 bp TCTGAAACTTGGCATGAGTGTGCCCAGTCAGCAGCTTGCAAAGAGAGGATGTGTTCCTCCTGCAACCTCTaGAAGTCCCGCATGAGGCGC +
Preference number: 5 (lower is better)
Translates to: SETWHECAQSAACKERMCSSCNL*KSRMRR
Trigger: GCGCCTCATGCGGGACTTCAAGAGGTTGCAGGAGGA...ACACATCCTCTCTTTGCAAGCTGCTGACTGGGCACACTCATGCCAAGTTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000625938.2
CDS-3UTR CAA 90 bp CTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCTCCTCCTGCAACCTCTaGAAGTCCCGCATGAGGCGC +
Preference number: 5 (lower is better)
Translates to: LSLAQKLTIVSIPLLPHLSSCNL*KSRMRR
Trigger: GCGCCTCATGCGGGACTTCAAGAGGTTGCAGGAGGA...GAGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000625938.2
CDS-3UTR CAA 90 bp TCTGAAACTTGGCATGAGTGTGCCCAGTCAGCAGCTTGCAAAGAGAGGATGTGTGAGCAGCCTGGCTGTTaGCTGGACTATTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: SETWHECAQSAACKERMCEQPGC*LDYWDW
Trigger: CCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTC...ACACATCCTCTCTTTGCAAGCTGCTGACTGGGCACACTCATGCCAAGTTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp ATGCCAAATCGCACATGGCGTTGTCGAGTGTTTTTACAAGATCACTGCTTAGCTTCCTCCTGCAACCTCTaGAAGTCCCGCATGAGGCGC +
Preference number: 5 (lower is better)
Translates to: MPNRTWRCRVFLQDHCLASSCNL*KSRMRR
Trigger: GCGCCTCATGCGGGACTTCAAGAGGTTGCAGGAGGA...AGCTAAGCAGTGATCTTGTAAAAACACTCGACAACGCCATGTGCGATTTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS TCA 90 bp GCAGAAACACGCTTTTCATATTCCCGTTTGTTCTCCTGGTACAGCTaGGCAGCCTGGCTGTTTGCTGGACTATTGGGATTGGGTTCATCC +
Preference number: 5 (lower is better)
Translates to: AETRFSYSRLFSWYS*AAWLFAGLLGLGSS
Trigger: GGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAATATGAAAAGCGTGTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CCA 90 bp TTCCCGTTTGTTCTCCTGGTACAGCTGAGCAGCCTGGCTGTTTGCTaGACTATTGGGATTGGGTTCATCCAACAGAGACTGTATGGATGT +
Preference number: 5 (lower is better)
Translates to: FPFVLLVQLSSLAVC*TIGIGFIQQRLYGC
Trigger: ACATCCATACAGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS-3UTR CAA 90 bp CCAACGGTTCTGAAGTATGTCCAGACATATACTACCATCTGCATAGACATTTGGTCCTCCTGCAACCTCTaGAAGTCCCGCATGAGGCGC +
Preference number: 5 (lower is better)
Translates to: PTVLKYVQTYTTICIDIWSSCNL*KSRMRR
Trigger: GCGCCTCATGCGGGACTTCAAGAGGTTGCAGGAGGA...CCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629303.2
CDS GCA 90 bp ATATTCCCGTTTGTTCTCCTGGTACAGCTGAGCAGCCTGGCTGTTTaGTGGACTATTGGGATTGGGTTCATCCAACAGAGACTGTATGGA +
Preference number: 5 (lower is better)
Translates to: IFPFVLLVQLSSLAV*WTIGIGFIQQRLYG
Trigger: TCCATACAGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CCA 90 bp TGTTCTCCTGGTACAGCTGAGCAGCCTGGCTGTTTGCTGGACTATTaGGATTGGGTTCATCCAACAGAGACTGTATGGATGTTAGAATGG +
Preference number: 5 (lower is better)
Translates to: CSPGTAEQPGCLLDY*DWVHPTETVWMLEW
Trigger: CCATTCTAACATCCATACAGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS-3UTR CAA 90 bp ACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTTGCCCAGTCAGCAGCTaGCAAAGAGAGGATGTGTCA +
Preference number: 5 (lower is better)
Translates to: TFPSSKTHDCFHSSAPTPCPVSS*QREDVS
Trigger: TGACACATCCTCTCTTTGCAAGCTGCTGACTGGGCA...AGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp GCATGCAGCAATAACTCAGGATTTGAGTGGAAAATAGTTTGCCACAGATATGCTTGGAGGATCCTCCTCTaGAAGTCCCGCATGAGGCGC +
Preference number: 5 (lower is better)
Translates to: ACSNNSGFEWKIVCHRYAWRILL*KSRMRR
Trigger: GCGCCTCATGCGGGACTTCAAGAGGAGGATCCTCCA...AGCATATCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTTATTGCTGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630695.2
CDS-3UTR CAA 90 bp GTGTGTCAGATTGGCATGTCCTCCTATGAATTTCCTCCAGCTCTGAAGCCACCAAATTCAAGCATACATTaGGAGAGGACCTCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: VCQIGMSSYEFPPALKPPNSSIH*ERTSWC
Trigger: ACACCACGAGGTCCTCTCCAAATGTATGCTTGAATT...TGGTGGCTTCAGAGCTGGAGGAAATTCATAGGAGGACATGCCAATCTGACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp AGCATACATTTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATGGTATTGAAGTTAGAGTaGTCCGGCGGAAATTCAAGC +
Preference number: 5 (lower is better)
Translates to: SIHLERTSWCVRLACPPMVLKLE*SGGNSS
Trigger: GCTTGAATTTCCGCCGGACAACTCTAACTTCAATAC...CATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp TGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAGCAAGAATGGGTCCAGGCAGCCAACATGTATTTaGACAGTGGGAACCCTGCCC +
Preference number: 5 (lower is better)
Translates to: CQNIYLTTGYAGSKNGSRQPTCI*TVGTLP
Trigger: GGGCAGGGTTCCCACTGTCAAAATACATGTTGGCTG...CCTGGACCCATTCTTGCTGCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTTTCCACACCATTATGTaGTTCTCGGACGGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFFHTIM*FSDGAP
Trigger: CGGGGCTCCGTCCGAGAACAACATAATGGTGTGGAA...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATTGCCCAGTCAGCAGCTaGCAAAGAGAGGATGTGTCA +
Preference number: 5 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDCPVSS*QREDVS
Trigger: TGACACATCCTCTCTTTGCAAGCTGCTGACTGGGCA...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp ACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTAAGACACATCATAGGTaGGACTCCAACGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: TFPSSKTHDCFHSSAPTPKTHHR*DSNGSE
Trigger: TTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTT...AGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATGCTGGACTATTGGGATaGGGTTCATCCAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDAGLLG*GSSNRD
Trigger: GTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGC...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp ACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTCTCAAAAACTCACGATaGTTTCCATTCCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TFPSSKTHDCFHSSAPTPLKNSR*FPFLCS
Trigger: GGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAG...AGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp TCTGAAACTTGGCATGAGTGTGCCCAGTCAGCAGCTTGCAAAGAGAGGATGTGTAAAAGATCGCAGACATaGGCTTTAAGGTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: SETWHECAQSAACKERMCKRSQT*ALRFSD
Trigger: ATCTGAGAACCTTAAAGCCAATGTCTGCGATCTTTT...ACACATCCTCTCTTTGCAAGCTGCTGACTGGGCACACTCATGCCAAGTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CAA 90 bp ACTTCTAAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCTGTTTGCTGGACTATaGGGATTGGGTTCATCCAAC +
Preference number: 5 (lower is better)
Translates to: TSKSNTSEGPARMKHFSNLFAGL*GLGSSN
Trigger: GTTGGATGAACCCAATCCCAATAGTCCAGCAAACAG...ATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTTAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTGAGCAGCCTGGCTGTTaGCTGGACTATTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: NILVIKLSISTSCITIHLEQPGC*LDYWDW
Trigger: CCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTC...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp AATCCTGAGTATATATATGCTCCTTTAAAGGAAATTCCTCCTGCCGACATCCCCTCGTGGTGTGTCAGATaGGCATGTCCTCCTATGAAT +
Preference number: 5 (lower is better)
Translates to: NPEYIYAPLKEIPPADIPSWCVR*ACPPMN
Trigger: ATTCATAGGAGGACATGCCAATCTGACACACCACGA...GGGGATGTCGGCAGGAGGAATTTCCTTTAAAGGAGCATATATATACTCAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp ATGCCAAATCGCACATGGCGTTGTCGAGTGTTTTTACAAGATCACTGCTTAGCTTCTTGCAGAAACGTATaGAAGTTAGAGTTGTCCGGC +
Preference number: 5 (lower is better)
Translates to: MPNRTWRCRVFLQDHCLASCRNV*KLELSG
Trigger: GCCGGACAACTCTAACTTCAATACGTTTCTGCAAGA...AGCTAAGCAGTGATCTTGTAAAAACACTCGACAACGCCATGTGCGATTTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp AGCATACATTTGGAGAGGACCTCGTGGTGTGTCAGATTGGCATGTCCTCCTATGCTAGCTGTAAAACTCTaGCAGAAACGTATTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SIHLERTSWCVRLACPPMLAVKL*QKRIEV
Trigger: AACTTCAATACGTTTCTGCAAGAGTTTTACAGCTAG...CATAGGAGGACATGCCAATCTGACACACCACGAGGTCCTCTCCAAATGTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp CTCTTGCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACAAAGACACATCATAGGTaGGACTCCAACGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: LLQKRIEVRVVRRKFKHTKTHHR*DSNGSE
Trigger: TTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTT...TGTATGCTTGAATTTCCGCCGGACAACTCTAACTTCAATACGTTTCTGCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp AGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTGCTGGACTATTGGGATaGGGTTCATCCAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: RLKELQLSLAQKLTIVSIAGLLG*GSSNRD
Trigger: GTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGC...AATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp GTCAGTTACTACAATTGCTGTACTCCTTTAGCTGAGTCCTTCAACTTTCTCCTTCTGTTTGCTGGACTATaGGGATTGGGTTCATCCAAC +
Preference number: 5 (lower is better)
Translates to: VSYYNCCTPLAESFNFLLLFAGL*GLGSSN
Trigger: GTTGGATGAACCCAATCCCAATAGTCCAGCAAACAG...AAGGAGAAAGTTGAAGGACTCAGCTAAAGGAGTACAGCAATTGTAGTAACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AACTTTCTCCTTCTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCGAGCAGCCTGGCTGTTaGCTGGACTATTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: NFLLLASKYYVVIHMTEIEQPGC*LDYWDW
Trigger: CCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTC...GATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAGAAGGAGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATGAGCAGCCTGGCTGTTaGCTGGACTATTGGGATTGG +
Preference number: 5 (lower is better)
Translates to: NNILVIKLSISTSCITIHEQPGC*LDYWDW
Trigger: CCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTC...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp ACTTTCCCTAGCTCAAAAACTCACGATTGTTTCCATTCCTCTGCTCCCACACCTAAAAGATCGCAGACATaGGCTTTAAGGTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: TFPSSKTHDCFHSSAPTPKRSQT*ALRFSD
Trigger: ATCTGAGAACCTTAAAGCCAATGTCTGCGATCTTTT...AGGTGTGGGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAGCTAGGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CAA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTGCTGGACTATTGGGATaGGGTTCATCCAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: NILVIKLSISTSCITIHLAGLLG*GSSNRD
Trigger: GTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGC...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp TTTAAAAAGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTTGCCCAGTCAGCAGCTaGCAAAGAGAGGATGTGTCA +
Preference number: 5 (lower is better)
Translates to: FKKIKGAPTFPSSKTHDCCPVSS*QREDVS
Trigger: TGACACATCCTCTCTTTGCAAGCTGCTGACTGGGCA...ACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTCTCAAAAACTCACGATaGTTTCCATTCCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFLKNSR*FPFLCS
Trigger: GGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAG...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp CTTGCCAGTAAATACTACGTTGTAATTCATATGACTGAGATCTTAGTATCACAGGCTGGACTATTGGGATaGGGTTCATCCAACAGAGAC +
Preference number: 5 (lower is better)
Translates to: LASKYYVVIHMTEILVSQAGLLG*GSSNRD
Trigger: GTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGC...CTGTGATACTAAGATCTCAGTCATATGAATTACAACGTAGTATTTACTGGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp ATCACAGGATTTTTAGCTCCCATGCCTCCTTCAAAATTGTTTACATGGATTTGTCTGTTTGCTGGACTATaGGGATTGGGTTCATCCAAC +
Preference number: 5 (lower is better)
Translates to: ITGFLAPMPPSKLFTWICLFAGL*GLGSSN
Trigger: GTTGGATGAACCCAATCCCAATAGTCCAGCAAACAG...ACAAATCCATGTAAACAATTTTGAAGGAGGCATGGGAGCTAAAAATCCTGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp ATCACAGGATTTTTAGCTCCCATGCCTCCTTCAAAATTGTTTACATGGATTTGTAAGACACATCATAGGTaGGACTCCAACGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ITGFLAPMPPSKLFTWICKTHHR*DSNGSE
Trigger: TTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTT...ACAAATCCATGTAAACAATTTTGAAGGAGGCATGGGAGCTAAAAATCCTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAGACACATCATAGGTaGGACTCCAACGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: NILVIKLSISTSCITIHLKTHHR*DSNGSE
Trigger: TTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTT...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAACTGTTTGCTGGACTATaGGGATTGGGTTCATCCAAC +
Preference number: 5 (lower is better)
Translates to: ILVIKLSISTSCITIHLKLFAGL*GLGSSN
Trigger: GTTGGATGAACCCAATCCCAATAGTCCAGCAAACAG...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp TTTCTGATGTTTAAGGAGAGGGTAGAAGGGGTAGGAAAACTTGGCAAGGAAGATAGCTTTGTTCTACTATaGCAGAAACACGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: FLMFKERVEGVGKLGKEDSFVLL*QKHAFH
Trigger: ATGAAAAGCGTGTTTCTGCAATAGTAGAACAAAGCT...ATCTTCCTTGCCAAGTTTTCCTACCCCTTCTACCCTCTCCTTAAACATCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp GCATGCAGCAATAACTCAGGATTTGAGTGGAAAATAGTTTGCCACAGATATGCTTCAACTTTCTCCTTCTaGCCAGTAAATACTACGTTG +
Preference number: 5 (lower is better)
Translates to: ACSNNSGFEWKIVCHRYASTFSF*PVNTTL
Trigger: CAACGTAGTATTTACTGGCAAGAAGGAGAAAGTTGA...AGCATATCTGTGGCAAACTATTTTCCACTCAAATCCTGAGTTATTGCTGCATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371558.7
ENST00000630695.2
CDS-3UTR CAA 90 bp AAATCCAACACAAGTGAAGGACCAGCCAGGATGAAACACTTCAGCAATCATTTTTCAACTTTCTCCTTCTaGCCAGTAAATACTACGTTG +
Preference number: 5 (lower is better)
Translates to: KSNTSEGPARMKHFSNHFSTFSF*PVNTTL
Trigger: CAACGTAGTATTTACTGGCAAGAAGGAGAAAGTTGA...AAAATGATTGCTGAAGTGTTTCATCCTGGCTGGTCCTTCACTTGTGTTGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAAAAGACACATCATAGGTaGGACTCCAACGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: ILVIKLSISTSCITIHLKKTHHR*DSNGSE
Trigger: TTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTT...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp ATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAAACTCAAAAACTCACGATaGTTTCCATTCCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ILVIKLSISTSCITIHLKLKNSR*FPFLCS
Trigger: GGAGCAGAGGAATGGAAACAATCGTGAGTTTTTGAG...TTTAAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp TATGCTTGTGAAGTTAGATGCCAAAATATCTACTTAACTACAGGTTATGCTGGCAAATCGCACATGGCGTaGTCGAGTGTTTTTACAAGA +
Preference number: 5 (lower is better)
Translates to: YACEVRCQNIYLTTGYAGKSHMA*SSVFTR
Trigger: TCTTGTAAAAACACTCGACAACGCCATGTGCGATTT...GCCAGCATAACCTGTAGTTAAGTAGATATTTTGGCATCTAACTTCACAAGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS-3UTR CAA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATACAATCACGCCAGCTTaGTTCTACTATTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: NNILVIKLSISTSCITIHTITPA*FYYCRN
Trigger: GTTTCTGCAATAGTAGAACAAAGCTGGCGTGATTGT...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp TTTAAAAAGATTAAAGGAGCTCCAACTTTCCCTAGCTCAAAAACTCACGATTGTACAATCACGCCAGCTTaGTTCTACTATTGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: FKKIKGAPTFPSSKTHDCTITPA*FYYCRN
Trigger: GTTTCTGCAATAGTAGAACAAAGCTGGCGTGATTGT...ACAATCGTGAGTTTTTGAGCTAGGGAAAGTTGGAGCTCCTTTAATCTTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTTCAACTTTCTCCTTCTaGCCAGTAAATACTACGTTG +
Preference number: 5 (lower is better)
Translates to: NILVIKLSISTSCITIHLSTFSF*PVNTTL
Trigger: CAACGTAGTATTTACTGGCAAGAAGGAGAAAGTTGA...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000630695.2
CDS-3UTR CAA 90 bp AACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATCTTAGCTTTGTTCTACTATaGCAGAAACACGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NILVIKLSISTSCITIHLSFVLL*QKHAFH
Trigger: ATGAAAAGCGTGTTTCTGCAATAGTAGAACAAAGCT...AAGATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS-3UTR CAA 90 bp AATAACATCCTGGTCATCAAGCTAAGCATAAGCACCTCTTGTATAACAATTCATAGCTTTGTTCTACTATaGCAGAAACACGCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: NNILVIKLSISTSCITIHSFVLL*QKHAFH
Trigger: ATGAAAAGCGTGTTTCTGCAATAGTAGAACAAAGCT...ATGAATTGTTATACAAGAGGTGCTTATGCTTAGCTTGATGACCAGGATGTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371558.7
ENST00000625938.2
ENST00000628549.1
ENST00000630695.2
CDS GCA 72 bp GAGAAGGGGAGGCGGAAGCACCCAGAGGAACCGCGCTaGCTCTCCGAAGTCGAGGGTCGGTCTGGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: EKGRRKHPEEPR*LSEVEGRSGAG
Trigger: GCCGGCGCCAGACCGACCCTCGACTTCGGAGAGGCAGCGCGGTTCCTCTGGGTGCTTCCGCCTCCCCTTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346330.6
ENST00000625379.1
ENST00000625938.2
CDS CCA 72 bp TCCAGCACCGCTACCGGGGTCGGAAGCCACTACAAATaGATGTCCCGGGCTCAGAGACACAGGGCAAGCCGC +
Preference number: 6 (lower is better)
Translates to: SSTATGVGSHYK*MSRAQRHRASR
Trigger: GCGGCTTGCCCTGTGTCTCTGAGCCCGGGACATCCATTTGTAGTGGCTTCCGACCCCGGTAGCGGTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625379.1
CDS CAA 90 bp CGAACGCAGACTCACCCGAAAATGACCGCGTTCCACACCATTATGTaGTTCTCGGACGGAGCCCCGCTGACTCCGGCTGGAGGATCCTCC +
Preference number: 6 (lower is better)
Translates to: RTQTHPKMTAFHTIM*FSDGAPLTPAGGSS
Trigger: GGAGGATCCTCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACATAATGGTGTGGAACGCGGTCATTTTCGGGTGAGTCTGCGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625379.1
CDS CCA 72 bp TATGTTGTTCTCGGACGGAGCCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCTCTTGAAGTCCCGCAT +
Preference number: 6 (lower is better)
Translates to: YVVLGRSPADSG*RILLQPLEVPH
Trigger: ATGCGGGACTTCAAGAGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000469205.2
ENST00000625379.1
ENST00000625938.2
ENST00000629303.2
ENST00000631185.2
CDS CCA 72 bp TATGTTGTTCTCGGACGGAGCCCCGCTGACTCCGGCTaGAGGATCCTCCTGCAACCTTCGGGAAGACAGACA +
Preference number: 6 (lower is better)
Translates to: YVVLGRSPADSG*RILLQPSGRQT
Trigger: TGTCTGTCTTCCCGAAGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628549.1
CDS CAA 72 bp TCAGGCCCGAAAATGACCGCGTTCCACACCATTATGTaGTTCTCGGACGGAGCCCCGCTGACTCCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: SGPKMTAFHTIM*FSDGAPLTPAG
Trigger: TCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACATAATGGTGTGGAACGCGGTCATTTTCGGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000469205.2
ENST00000625938.2
ENST00000628549.1
ENST00000629303.2
ENST00000630695.2
ENST00000631185.2
CDS TCA 72 bp TTCCCACTTAAGGGGCCCCCTTCTCCCTGCTTCATCTaGGATGGCTATCCCGAGCTCTGCCATCTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: FPLKGPPSPCFI*DGYPELCHLQH
Trigger: GTGCTGGAGATGGCAGAGCTCGGGATAGCCATCTCAGATGAAGCAGGGAGAAGGGGGCCCCTTAAGTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625379.1
CDS CAA 72 bp ACTCACCCGAAAATGACCGCGTTCCACACCATTATGTaGTTCTCGGACGGAGCCCCGCTGACTCCGGCTGGA +
Preference number: 6 (lower is better)
Translates to: THPKMTAFHTIM*FSDGAPLTPAG
Trigger: TCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACATAATGGTGTGGAACGCGGTCATTTTCGGGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625379.1
CDS TCA 72 bp TCTCGCCACCGCCACGAACGCAGACTCACCCGAAAATaGCCGCGTTCCACACCATTATGTTGTTCTCGGACG +
Preference number: 6 (lower is better)
Translates to: SRHRHERRLTRK*PRSTPLCCSRT
Trigger: CGTCCGAGAACAACATAATGGTGTGGAACGCGGTCATTTTCGGGTGAGTCTGCGTTCGTGGCGGTGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625379.1
CDS CCA 72 bp GGCAGGTTCCTAAGCAGGAGACACTTCCAGGATGACTaGGAACCCTTTCCCCAGATGACCAGGCTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: GRFLSRRHFQDD*EPFPQMTRLLK
Trigger: TTTCAGGAGCCTGGTCATCTGGGGAAAGGGTTCCCAGTCATCCTGGAAGTGTCTCCTGCTTAGGAACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469205.2
CDS CCA 72 bp GGTACAGCTGAGCAGCCTGGCTGTTTGCTGGACTATTaGGATTGGGTTCATCCAACAGAGACTGTATGGATG +
Preference number: 6 (lower is better)
Translates to: GTAEQPGCLLDY*DWVHPTETVWM
Trigger: CATCCATACAGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CAA 72 bp GTTTGTTCTCCTGGTACAGCTGAGCAGCCTGGCTGTTaGCTGGACTATTGGGATTGGGTTCATCCAACAGAG +
Preference number: 6 (lower is better)
Translates to: VCSPGTAEQPGC*LDYWDWVHPTE
Trigger: CTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CAA 90 bp CATATTCCCGTTTGTTCTCCTGGTACAGCTGAGCAGCCTGGCTGTTaGCTGGACTATTGGGATTGGGTTCATCCAACAGAGACTGTATGG +
Preference number: 6 (lower is better)
Translates to: HIPVCSPGTAEQPGC*LDYWDWVHPTETVW
Trigger: CCATACAGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS TCA 72 bp CGCTTTTCATATTCCCGTTTGTTCTCCTGGTACAGCTaGGCAGCCTGGCTGTTTGCTGGACTATTGGGATTG +
Preference number: 6 (lower is better)
Translates to: RFSYSRLFSWYS*AAWLFAGLLGL
Trigger: CAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAATATGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CCA 72 bp GCTGAGCAGCCTGGCTGTTTGCTGGACTATTGGGATTaGGTTCATCCAACAGAGACTGTATGGATGTTAGAA +
Preference number: 6 (lower is better)
Translates to: AEQPGCLLDYWD*VHPTETVWMLE
Trigger: TTCTAACATCCATACAGTCTCTGTTGGATGAACCCAATCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS GCA 72 bp ACACAGCCCACTTATCCATCTGTCAAAAGTTCACAATaGCATACAGGCTCTTCACCCAGAGGATCTGTATGG +
Preference number: 6 (lower is better)
Translates to: TQPTYPSVKSSQ*HTGSSPRGSVW
Trigger: CCATACAGATCCTCTGGGTGAAGAGCCTGTATGGCATTGTGAACTTTTGACAGATGGATAAGTGGGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS CAA 90 bp GCCAGCTTCTTTAAACTGTACCCGGGGTCAACAATCACGCCAGCTTaGTTCTACTATTGCAGAAACACGCTTTTCATATTCCCGTTTGTT +
Preference number: 6 (lower is better)
Translates to: ASFFKLYPGSTITPA*FYYCRNTLFIFPFV
Trigger: AACAAACGGGAATATGAAAAGCGTGTTTCTGCAATAGTAGAACAAAGCTGGCGTGATTGTTGACCCCGGGTACAGTTTAAAGAAGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CAA 90 bp CCCAGAGGATCTGTATGGATGTTAGAATGGAAGACACATCATAGGTaGGACTCCAACGGTTCTGAAGTATGTCCAGACATATACTACCAT +
Preference number: 6 (lower is better)
Translates to: PRGSVWMLEWKTHHR*DSNGSEVCPDIYYH
Trigger: ATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTCTAACATCCATACAGATCCTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2
CDS CAA 90 bp CCAACAGAGACTGTATGGATGTTAGAATGGAAGACACATCATAGGTaGGACTCCAACGGTTCTGAAGTATGTCCAGACATATACTACCAT +
Preference number: 6 (lower is better)
Translates to: PTETVWMLEWKTHHR*DSNGSEVCPDIYYH
Trigger: ATGGTAGTATATGTCTGGACATACTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTCTAACATCCATACAGTCTCTGTTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CAA 72 bp ACTGTATGGATGTTAGAATGGAAGACACATCATAGGTaGGACTCCAACGGTTCTGAAGTATGTCCAGACATA +
Preference number: 6 (lower is better)
Translates to: TVWMLEWKTHHR*DSNGSEVCPDI
Trigger: TATGTCTGGACATACTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTCTAACATCCATACAGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CAA 72 bp TTTAAACTGTACCCGGGGTCAACAATCACGCCAGCTTaGTTCTACTATTGCAGAAACACGCTTTTCATATTC +
Preference number: 6 (lower is better)
Translates to: FKLYPGSTITPA*FYYCRNTLFIF
Trigger: GAATATGAAAAGCGTGTTTCTGCAATAGTAGAACAAAGCTGGCGTGATTGTTGACCCCGGGTACAGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000346330.6
ENST00000371558.7
ENST00000371569.6
ENST00000625938.2
ENST00000628549.1
ENST00000628734.1
ENST00000630695.2
CDS CAA 72 bp TCTGTATGGATGTTAGAATGGAAGACACATCATAGGTaGGACTCCAACGGTTCTGAAGTATGTCCAGACATA +
Preference number: 6 (lower is better)
Translates to: SVWMLEWKTHHR*DSNGSEVCPDI
Trigger: TATGTCTGGACATACTTCAGAACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTCTAACATCCATACAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631185.2