RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBD (Homo sapiens)

Ensembl gene IDs: ENSG00000206513, ENSG00000213886

Ensembl transcript IDs: ENST00000377050.5, ENST00000383547.3, ENST00000383641.2, ENST00000414436.2, ENST00000421519.2, ENST00000429935.2, ENST00000432676.2

Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCATTAATTTaGGGAAATCATCAGAAGATGTGTTCGTTGAGTAAGAGATTAAAA +
Preference number: 2 (lower is better)
Translates to: PSHPNLTLLISFSLI*GNHQKMCSLSKRLK
Trigger: TTTTAATCTCTTACTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCCTGCCAACACCCCATaGCCAGGGTGGTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIPANTP*PGWSPS
Trigger: GGAGGGTGACCACCCTGGGCATGGGGTGTTGGCAGG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377050.5
ENST00000421519.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCTGCCAACACCCCATaGCCAGGGTGGTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIPANTP*PGWSPS
Trigger: GGAGGGTGACCACCCTGGGCATGGGGTGTTGGCAGG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377050.5
ENST00000421519.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCACTGGACCTTCGCACCTaGAGGAGGTGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISLDLRT*RRCLFA
Trigger: GGCAAAGAGGCACCTCCTCCAGGTGCGAAGGTCCAG...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCTGGACCTTCGCACCTaGAGGAGGTGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLILDLRT*RRCLFA
Trigger: GGCAAAGAGGCACCTCCTCCAGGTGCGAAGGTCCAG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCACGCACCTGGAGGAGGTaGCTCTTTGCCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISRTWRR*LFASSP
Trigger: AGGTGATGAGGCAAAGAGGCACCTCCTCCAGGTGCG...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCGCACCTGGAGGAGGTaGCTCTTTGCCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIRTWRR*LFASSP
Trigger: AGGTGATGAGGCAAAGAGGCACCTCCTCCAGGTGCG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCCTCGGAACGGACATaGACACAGAGGCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLISSERT*TQRQEA
Trigger: TGCTTCCTGCCTCTGTGTGCATGTCCGTTCCGAGGA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATCCTCGGAACGGACATaGACACAGAGGCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISSSERT*TQRQEA
Trigger: TGCTTCCTGCCTCTGTGTGCATGTCCGTTCCGAGGA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCGCACCTGGAGGAGGTaGCTCTTTGCCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHRTWRR*LFASSP
Trigger: AGGTGATGAGGCAAAGAGGCACCTCCTCCAGGTGCG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCGCAGCTCCTCATCACTaGGCTTCACCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIAAPHH*ASPLSG
Trigger: CCCTGAAAGTGGTGAAGCCCAGTGATGAGGAGCTGC...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGGACCTTCGCACCTaGAGGAGGTGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLILDLRT*RRCLFA
Trigger: GGCAAAGAGGCACCTCCTCCAGGTGCGAAGGTCCAG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTTGTGCCACTGAGCTaGACCTTCGCACCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHLVPLS*TFAPGG
Trigger: TCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAATTGGGAGCCATCTCTaGAGACAAGGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISIGSHL*RQGARN
Trigger: GTTTCTGGCCCCTTGTCTGCAGAGATGGCTCCCAAT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCATTGGGAGCCATCTCTaGAGACAAGGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIIGSHL*RQGARN
Trigger: GTTTCTGGCCCCTTGTCTGCAGAGATGGCTCCCAAT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTCCTCGGAACGGACATaGACACAGAGGCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHSSERT*TQRQEA
Trigger: TGCTTCCTGCCTCTGTGTGCATGTCCGTTCCGAGGA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCGCACCTGGAGGAGGTaGCTCTTTGCCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFRTWRR*LFASSP
Trigger: AGGTGATGAGGCAAAGAGGCACCTCCTCCAGGTGCG...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGCCTGCCAACACCCCATaGCCAGGGTGGTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEPANTP*PGWSPS
Trigger: GGAGGGTGACCACCCTGGGCATGGGGTGTTGGCAGG...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377050.5
ENST00000421519.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCAGAGGCAGGAAGCATTaGGAGCCATCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIRGRKH*EPSLQT
Trigger: TGTCTGCAGAGATGGCTCCCAATGCTTCCTGCCTCT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAAGAGGCAGGAAGCATTaGGAGCCATCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISRGRKH*EPSLQT
Trigger: TGTCTGCAGAGATGGCTCCCAATGCTTCCTGCCTCT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCACCCAGCAAAAGAACCTaGTCCTGCACAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISPSKRT*SCTGTL
Trigger: CAAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGG...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCCCAGCAAAAGAACCTaGTCCTGCACAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIPSKRT*SCTGTL
Trigger: CAAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATGCAGCTCCTCATCACTaGGCTTCACCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHAAPHH*ASPLSG
Trigger: CCCTGAAAGTGGTGAAGCCCAGTGATGAGGAGCTGC...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCTGGACCTTCGCACCTaGAGGAGGTGCCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSLDLRT*RRCLFA
Trigger: GGCAAAGAGGCACCTCCTCCAGGTGCGAAGGTCCAG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTGTGCCACTGAGCTaGACCTTCGCACCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLILVPLS*TFAPGG
Trigger: TCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCTTGTGCCACTGAGCTaGACCTTCGCACCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFLVPLS*TFAPGG
Trigger: TCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAG...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATATTGGGAGCCATCTCTaGAGACAAGGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHIGSHL*RQGARN
Trigger: GTTTCTGGCCCCTTGTCTGCAGAGATGGCTCCCAAT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCCTCGGAACGGACATaGACACAGAGGCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFSSERT*TQRQEA
Trigger: TGCTTCCTGCCTCTGTGTGCATGTCCGTTCCGAGGA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCGCACCTGGAGGAGGTaGCTCTTTGCCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSRTWRR*LFASSP
Trigger: AGGTGATGAGGCAAAGAGGCACCTCCTCCAGGTGCG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAATCCCCTGCCTGGATTaGTGTGTTTGTCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISIPCLD*CVCPAL
Trigger: CAAAGCTGGACAAACACAGCAATCCAGGCAGGGGAT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCATCCCCTGCCTGGATTaGTGTGTTTGTCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIIPCLD*CVCPAL
Trigger: CAAAGCTGGACAAACACAGCAATCCAGGCAGGGGAT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATAGAGGCAGGAAGCATTaGGAGCCATCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHRGRKH*EPSLQT
Trigger: TGTCTGCAGAGATGGCTCCCAATGCTTCCTGCCTCT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCCAGCAAAAGAACCTaGTCCTGCACAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHPSKRT*SCTGTL
Trigger: CAAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCGCAGCTCCTCATCACTaGGCTTCACCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFAAPHH*ASPLSG
Trigger: CCCTGAAAGTGGTGAAGCCCAGTGATGAGGAGCTGC...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTGCAGCTCCTCATCACTaGGCTTCACCACTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIAAPHH*ASPLSG
Trigger: CCCTGAAAGTGGTGAAGCCCAGTGATGAGGAGCTGC...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCTTGTGCCACTGAGCTaGACCTTCGCACCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSLVPLS*TFAPGG
Trigger: TCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISWKSPA*IAVFVQ
Trigger: CTGGACAAACACAGCAATCCAGGCAGGGGATTTCCA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIWKSPA*IAVFVQ
Trigger: CTGGACAAACACAGCAATCCAGGCAGGGGATTTCCA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTATTGGGAGCCATCTCTaGAGACAAGGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIIGSHL*RQGARN
Trigger: GTTTCTGGCCCCTTGTCTGCAGAGATGGCTCCCAAT...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATATCCCCTGCCTGGATTaGTGTGTTTGTCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHIPCLD*CVCPAL
Trigger: CAAAGCTGGACAAACACAGCAATCCAGGCAGGGGAT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIELEIP*LDCCVC
Trigger: ACAAACACAGCAATCCAGGCAGGGGATTTCCAACTC...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTAGAGGCAGGAAGCATTaGGAGCCATCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIRGRKH*EPSLQT
Trigger: TGTCTGCAGAGATGGCTCCCAATGCTTCCTGCCTCT...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCCCAGCAAAAGAACCTaGTCCTGCACAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFPSKRT*SCTGTL
Trigger: CAAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGG...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCCAGCAAAAGAACCTaGTCCTGCACAGGAACCTTG +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIPSKRT*SCTGTL
Trigger: CAAGGTTCCTGTGCAGGACCAGGTTCTTTTGCTGGG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHWKSPA*IAVFVQ
Trigger: CTGGACAAACACAGCAATCCAGGCAGGGGATTTCCA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCACTTATATACCAGAGTTaGGTTGGAAATCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISLIYQS*VGNPLP
Trigger: AGGCAGGGGATTTCCAACTCAACTCTGGTATATAAG...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCAAAAGAACCTGGTCCTaGACAGGAACCTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIKRTWS*TGTLVL
Trigger: TAAGACCAAGGTTCCTGTGCAGGACCAGGTTCTTTT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAAAAAGAACCTGGTCCTaGACAGGAACCTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISKRTWS*TGTLVL
Trigger: TAAGACCAAGGTTCCTGTGCAGGACCAGGTTCTTTT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGCGCACCTGGAGGAGGTaGCTCTTTGCCTCATCACCT +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVERTWRR*LFASSP
Trigger: AGGTGATGAGGCAAAGAGGCACCTCCTCCAGGTGCG...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCACCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCTGATGCCGTAATCTaGCATCATCTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLISDAVI*HHLPIF
Trigger: GAAGATGGGAAGATGATGGCAGATTACGGCATCAGA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATGTCCAGCTTTGCTGTaGTCTTTGTTCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISCPALL*SLFLHA
Trigger: AGCATGCAAGAACAAAGAGCACAGCAAAGCTGGACA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTGTCCAGCTTTGCTGTaGTCTTTGTTCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLICPALL*SLFLHA
Trigger: AGCATGCAAGAACAAAGAGCACAGCAAAGCTGGACA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCGTGTTTGTCCAGCTTTaGTGTGCTCTTTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIVFVQL*CALCSC
Trigger: GCAAGAACAAAGAGCACAGCAAAGCTGGACAAACAC...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCATCCCCTGCCTGGATTaGTGTGTTTGTCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFIPCLD*CVCPAL
Trigger: CAAAGCTGGACAAACACAGCAATCCAGGCAGGGGAT...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHELEIP*LDCCVC
Trigger: ACAAACACAGCAATCCAGGCAGGGGATTTCCAACTC...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTAGAGGCAGGAAGCATTaGGAGCCATCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSRGRKH*EPSLQT
Trigger: TGTCTGCAGAGATGGCTCCCAATGCTTCCTGCCTCT...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTGCAAGTCACAATCTaGGTCTCAGGGATTATACCC +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISLQVTI*VSGIIP
Trigger: GGGTATAATCCCTGAGACCCAGATTGTGACTTGCAA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFWKSPA*IAVFVQ
Trigger: CTGGACAAACACAGCAATCCAGGCAGGGGATTTCCA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTTGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIWKSPA*IAVFVQ
Trigger: CTGGACAAACACAGCAATCCAGGCAGGGGATTTCCA...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAATACCAGAGTTGAGTTaGAAATCCCCTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISIPELS*KSPAWI
Trigger: AATCCAGGCAGGGGATTTCCAACTCAACTCTGGTAT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCATACCAGAGTTGAGTTaGAAATCCCCTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIIPELS*KSPAWI
Trigger: AATCCAGGCAGGGGATTTCCAACTCAACTCTGGTAT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTCCTCGGAACGGACATaGACACAGAGGCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVESSERT*TQRQEA
Trigger: TGCTTCCTGCCTCTGTGTGCATGTCCGTTCCGAGGA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATAAAAGAACCTGGTCCTaGACAGGAACCTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHKRTWS*TGTLVL
Trigger: TAAGACCAAGGTTCCTGTGCAGGACCAGGTTCTTTT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTCTGATGCCGTAATCTaGCATCATCTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHSDAVI*HHLPIF
Trigger: GAAGATGGGAAGATGATGGCAGATTACGGCATCAGA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTGTCCAGCTTTGCTGTaGTCTTTGTTCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHCPALL*SLFLHA
Trigger: AGCATGCAAGAACAAAGAGCACAGCAAAGCTGGACA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATGTGTTTGTCCAGCTTTaGTGTGCTCTTTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHVFVQL*CALCSC
Trigger: GCAAGAACAAAGAGCACAGCAAAGCTGGACAAACAC...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTATCCCCTGCCTGGATTaGTGTGTTTGTCCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSIPCLD*CVCPAL
Trigger: CAAAGCTGGACAAACACAGCAATCCAGGCAGGGGAT...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIELEIP*LDCCVC
Trigger: ACAAACACAGCAATCCAGGCAGGGGATTTCCAACTC...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTTCACGCTGTCATATaGGTTGGCATCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISFHAVI*VGIKGH
Trigger: ATGACCTTTGATGCCAACCCATATGACAGCGTGAAA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCACTTTCAGGGTAAGGTaGATGGTCTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLITFRVR*MVFSLS
Trigger: TGACAAAGAGAAGACCATCCACCTTACCCTGAAAGT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAACTTTCAGGGTAAGGTaGATGGTCTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISTFRVR*MVFSLS
Trigger: TGACAAAGAGAAGACCATCCACCTTACCCTGAAAGT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTTGCAAGTCACAATCTaGGTCTCAGGGATTATACCC +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHLQVTI*VSGIIP
Trigger: GGGTATAATCCCTGAGACCCAGATTGTGACTTGCAA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATATACCAGAGTTGAGTTaGAAATCCCCTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHIPELS*KSPAWI
Trigger: AATCCAGGCAGGGGATTTCCAACTCAACTCTGGTAT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCTTGCATGCTCCCATaGATTTTCTTTCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLISCMLP*IFFHFC
Trigger: GCAAAAGTGAAAGAAAATTCATGGGAGCATGCAAGA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTATATACCAGAGTTaGGTTGGAAATCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLILIYQS*VGNPLP
Trigger: AGGCAGGGGATTTCCAACTCAACTCTGGTATATAAG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCTTATATACCAGAGTTaGGTTGGAAATCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFLIYQS*VGNPLP
Trigger: AGGCAGGGGATTTCCAACTCAACTCTGGTATATAAG...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGATTGGGAGCCATCTCTaGAGACAAGGGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEIGSHL*RQGARN
Trigger: GTTTCTGGCCCCTTGTCTGCAGAGATGGCTCCCAAT...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCTGATGCCGTAATCTaGCATCATCTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFSDAVI*HHLPIF
Trigger: GAAGATGGGAAGATGATGGCAGATTACGGCATCAGA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTTCTGATGCCGTAATCTaGCATCATCTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLISDAVI*HHLPIF
Trigger: GAAGATGGGAAGATGATGGCAGATTACGGCATCAGA...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGTCCAGCTTTGCTGTaGTCTTTGTTCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFCPALL*SLFLHA
Trigger: AGCATGCAAGAACAAAGAGCACAGCAAAGCTGGACA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCGTGTTTGTCCAGCTTTaGTGTGCTCTTTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFVFVQL*CALCSC
Trigger: GCAAGAACAAAGAGCACAGCAAAGCTGGACAAACAC...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSELEIP*LDCCVC
Trigger: ACAAACACAGCAATCCAGGCAGGGGATTTCCAACTC...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCGCTGTCATATGGGTTaGCATCAAAGGTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIRCHMG*HQRSLN
Trigger: ATTTAATGACCTTTGATGCCAACCCATATGACAGCG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTTTCACGCTGTCATATaGGTTGGCATCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHFHAVI*VGIKGH
Trigger: ATGACCTTTGATGCCAACCCATATGACAGCGTGAAA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATACTTTCAGGGTAAGGTaGATGGTCTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHTFRVR*MVFSLS
Trigger: TGACAAAGAGAAGACCATCCACCTTACCCTGAAAGT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTTTGCAAGTCACAATCTaGGTCTCAGGGATTATACCC +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLILQVTI*VSGIIP
Trigger: GGGTATAATCCCTGAGACCCAGATTGTGACTTGCAA...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTGCAAGTCACAATCTaGGTCTCAGGGATTATACCC +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFLQVTI*VSGIIP
Trigger: GGGTATAATCCCTGAGACCCAGATTGTGACTTGCAA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCATACCAGAGTTGAGTTaGAAATCCCCTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFIPELS*KSPAWI
Trigger: AATCCAGGCAGGGGATTTCCAACTCAACTCTGGTAT...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATATTCCAAGCTGGCTTTaGATGCTCTATTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHIPSWL*MLYFAL
Trigger: TAAGGCAAAATAGAGCATTCAAAGCCAGCTTGGAAT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377050.5
CDS-3UTR TCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTCTTGCATGCTCCCATaGATTTTCTTTCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHSCMLP*IFFHFC
Trigger: GCAAAAGTGAAAGAAAATTCATGGGAGCATGCAAGA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCTTATATACCAGAGTTaGGTTGGAAATCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSLIYQS*VGNPLP
Trigger: AGGCAGGGGATTTCCAACTCAACTCTGGTATATAAG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTCTGATGCCGTAATCTaGCATCATCTTCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSSDAVI*HHLPIF
Trigger: GAAGATGGGAAGATGATGGCAGATTACGGCATCAGA...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCTCTTTGTTCTTGCATaGTCCCATGAATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLILFVLA*SHEFSF
Trigger: GAAAGAAAATTCATGGGAGCATGCAAGAACAAAGAG...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCACTCTTTGTTCTTGCATaGTCCCATGAATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISLFVLA*SHEFSF
Trigger: GAAAGAAAATTCATGGGAGCATGCAAGAACAAAGAG...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTGTCCAGCTTTGCTGTaGTCTTTGTTCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSCPALL*SLFLHA
Trigger: AGCATGCAAGAACAAAGAGCACAGCAAAGCTGGACA...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGTGTTTGTCCAGCTTTaGTGTGCTCTTTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSVFVQL*CALCSC
Trigger: GCAAGAACAAAGAGCACAGCAAAGCTGGACAAACAC...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCACAGAAAAAGGACTTTaGATGCAGCTTATATACCAG +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLITEKGL*MQLIYQ
Trigger: CTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAACAGAAAAAGGACTTTaGATGCAGCTTATATACCAG +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISTEKGL*MQLIYQ
Trigger: CTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCGCTGTCATATGGGTTaGCATCAAAGGTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHRCHMG*HQRSLN
Trigger: ATTTAATGACCTTTGATGCCAACCCATATGACAGCG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTTTTCACGCTGTCATATaGGTTGGCATCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIFHAVI*VGIKGH
Trigger: ATGACCTTTGATGCCAACCCATATGACAGCGTGAAA...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTTCACGCTGTCATATaGGTTGGCATCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFFHAVI*VGIKGH
Trigger: ATGACCTTTGATGCCAACCCATATGACAGCGTGAAA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTACTTTCAGGGTAAGGTaGATGGTCTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLITFRVR*MVFSLS
Trigger: TGACAAAGAGAAGACCATCCACCTTACCCTGAAAGT...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTTCTTTCACTTTTGCTaGGCAGGAGTTAATAGACAA +
Preference number: 4 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIFFHFC*AGVNRQ
Trigger: TTGTCTATTAACTCCTGCCCAGCAAAAGTGAAAGAA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTTCACTTTTGCTaGGCAGGAGTTAATAGACAA +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISFFHFC*AGVNRQ
Trigger: TTGTCTATTAACTCCTGCCCAGCAAAAGTGAAAGAA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEWKSPA*IAVFVQ
Trigger: CTGGACAAACACAGCAATCCAGGCAGGGGATTTCCA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTATACCAGAGTTGAGTTaGAAATCCCCTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSIPELS*KSPAWI
Trigger: AATCCAGGCAGGGGATTTCCAACTCAACTCTGGTAT...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCTTGCATGCTCCCATaGATTTTCTTTCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFSCMLP*IFFHFC
Trigger: GCAAAAGTGAAAGAAAATTCATGGGAGCATGCAAGA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAATTTTCTTTCACTTTTaGTGGGCAGGAGTTAATAGA +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISIFFHF*WAGVNR
Trigger: TCTATTAACTCCTGCCCAGCAAAAGTGAAAGAAAAT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCTTTGTTCTTGCATaGTCCCATGAATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHLFVLA*SHEFSF
Trigger: GAAAGAAAATTCATGGGAGCATGCAAGAACAAAGAG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEELEIP*LDCCVC
Trigger: ACAAACACAGCAATCCAGGCAGGGGATTTCCAACTC...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAAAAAAGGACTTTGCATaGAGCTTATATACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISKKDFA*SLYTRV
Trigger: AACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCGCTGTCATATGGGTTaGCATCAAAGGTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIRCHMG*HQRSLN
Trigger: ATTTAATGACCTTTGATGCCAACCCATATGACAGCG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTTCTTTCACTTTTGCTaGGCAGGAGTTAATAGACAA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHFFHFC*AGVNRQ
Trigger: TTGTCTATTAACTCCTGCCCAGCAAAAGTGAAAGAA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGAAAAGAACCTGGTCCTaGACAGGAACCTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEKRTWS*TGTLVL
Trigger: TAAGACCAAGGTTCCTGTGCAGGACCAGGTTCTTTT...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGCCAGTCTCTTTCCATTaGAAGTCACAATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEPVSFH*KSQSGS
Trigger: AGACCCAGATTGTGACTTGCAATGGAAAGAGACTGG...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATATTTTCTTTCACTTTTaGTGGGCAGGAGTTAATAGA +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHIFFHF*WAGVNR
Trigger: TCTATTAACTCCTGCCCAGCAAAAGTGAAAGAAAAT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATAAAAAGGACTTTGCATaGAGCTTATATACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHKKDFA*SLYTRV
Trigger: AACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTT...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCACAGAAAAAGGACTTTaGATGCAGCTTATATACCAG +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFTEKGL*MQLIYQ
Trigger: CTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGT...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCGCTGTCATATGGGTTaGCATCAAAGGTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSRCHMG*HQRSLN
Trigger: ATTTAATGACCTTTGATGCCAACCCATATGACAGCG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTATTTTCTTTCACTTTTaGTGGGCAGGAGTTAATAGA +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIIFFHF*WAGVNR
Trigger: TCTATTAACTCCTGCCCAGCAAAAGTGAAAGAAAAT...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTCTCTTTGTTCTTGCATaGTCCCATGAATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSLFVLA*SHEFSF
Trigger: GAAAGAAAATTCATGGGAGCATGCAAGAACAAAGAG...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTAAAAAGGACTTTGCATaGAGCTTATATACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIKKDFA*SLYTRV
Trigger: AACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTT...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCAAAAAGGACTTTGCATaGAGCTTATATACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFKKDFA*SLYTRV
Trigger: AACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTT...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTACAGAAAAAGGACTTTaGATGCAGCTTATATACCAG +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSTEKGL*MQLIYQ
Trigger: CTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGT...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTTTCACGCTGTCATATaGGTTGGCATCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEFHAVI*VGIKGH
Trigger: ATGACCTTTGATGCCAACCCATATGACAGCGTGAAA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGACTTTCAGGGTAAGGTaGATGGTCTTCTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVETFRVR*MVFSLS
Trigger: TGACAAAGAGAAGACCATCCACCTTACCCTGAAAGT...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR TCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTCTTGCATGCTCCCATaGATTTTCTTTCACTTTTGC +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVESCMLP*IFFHFC
Trigger: GCAAAAGTGAAAGAAAATTCATGGGAGCATGCAAGA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTATTTTCTTTCACTTTTaGTGGGCAGGAGTTAATAGA +
Preference number: 4 (lower is better)
Translates to: NILHPTHPTQILLYSSHSIFFHF*WAGVNR
Trigger: TCTATTAACTCCTGCCCAGCAAAAGTGAAAGAAAAT...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGCGCTGTCATATGGGTTaGCATCAAAGGTCATTAAAT +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVERCHMG*HQRSLN
Trigger: ATTTAATGACCTTTGATGCCAACCCATATGACAGCG...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377050.5
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR GCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGCTCTTTGTTCTTGCATaGTCCCATGAATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVELFVLA*SHEFSF
Trigger: GAAAGAAAATTCATGGGAGCATGCAAGAACAAAGAG...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CCA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTTCTTTCACTTTTGCTaGGCAGGAGTTAATAGACAA +
Preference number: 4 (lower is better)
Translates to: THLILINFGKSSEDVFVEFFHFC*AGVNRQ
Trigger: TTGTCTATTAACTCCTGCCCAGCAAAAGTGAAAGAA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS GCA 90 bp GACTTTGCATGCAGCTTATATACCAGAGTTGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGTCCAGCTTTGCTGTGCTCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: DFACSLYTRVELEIP*LDCCVCPALLCSLF
Trigger: GAACAAAGAGCACAGCAAAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAGCTTTGCTGTGCTCTTaGTTCTTGCATGCTCCCATG +
Preference number: 5 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISALLCS*FLHAPM
Trigger: CATGGGAGCATGCAAGAACAAAGAGCACAGCAAAGC...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCCTGGATTGCTGTGTTaGTCCAGCTTTGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHPGLLC*SSFAVL
Trigger: GAGCACAGCAAAGCTGGACAAACACAGCAATCCAGG...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAAATCCCCTGCCTGGATaGCTGTGTTTGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISNPLPG*LCLSSF
Trigger: AAAGCTGGACAAACACAGCAATCCAGGCAGGGGATT...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCAATCCCCTGCCTGGATaGCTGTGTTTGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLINPLPG*LCLSSF
Trigger: AAAGCTGGACAAACACAGCAATCCAGGCAGGGGATT...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS TCA 90 bp CCAGAGACAGAAAAAGGACTTTGCATGCAGCTTATATACCAGAGTTaGGTTGGAAATCCCCTGCCTGGATTGCTGTGTTTGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: PETEKGLCMQLIYQS*VGNPLPGLLCLSSF
Trigger: AAAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTCTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS CCA 90 bp GACAGAAAAAGGACTTTGCATGCAGCTTATATACCAGAGTTGAGTTaGAAATCCCCTGCCTGGATTGCTGTGTTTGTCCAGCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: DRKRTLHAAYIPELS*KSPAWIAVFVQLCC
Trigger: ACAGCAAAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATGCTTTGCTGTGCTCTTaGTTCTTGCATGCTCCCATG +
Preference number: 5 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHALLCS*FLHAPM
Trigger: CATGGGAGCATGCAAGAACAAAGAGCACAGCAAAGC...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCTGGATTGCTGTGTTaGTCCAGCTTTGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIPGLLC*SSFAVL
Trigger: GAGCACAGCAAAGCTGGACAAACACAGCAATCCAGG...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCCCTGGATTGCTGTGTTaGTCCAGCTTTGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFPGLLC*SSFAVL
Trigger: GAGCACAGCAAAGCTGGACAAACACAGCAATCCAGG...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISYTRVE*EIPCLD
Trigger: ATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATA...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAGCTTATATACCAGAGTaGAGTTGGAAATCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISAYIPE*SWKSPA
Trigger: GGCAGGGGATTTCCAACTCAACTCTGGTATATAAGC...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTGCTTTGCTGTGCTCTTaGTTCTTGCATGCTCCCATG +
Preference number: 5 (lower is better)
Translates to: AIYFILPIPPKSYSTHLIALLCS*FLHAPM
Trigger: CATGGGAGCATGCAAGAACAAAGAGCACAGCAAAGC...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTGTGTTTGTCCAGCTTaGCTGTGCTCTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLICVCPA*LCSLFL
Trigger: CAAGAACAAAGAGCACAGCAAAGCTGGACAAACACA...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTAATCCCCTGCCTGGATaGCTGTGTTTGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: AIYFILPIPPKSYSTHLINPLPG*LCLSSF
Trigger: AAAGCTGGACAAACACAGCAATCCAGGCAGGGGATT...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCAATCCCCTGCCTGGATaGCTGTGTTTGTCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFNPLPG*LCLSSF
Trigger: AAAGCTGGACAAACACAGCAATCCAGGCAGGGGATT...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATTATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHYTRVE*EIPCLD
Trigger: ATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATA...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGCTTTGCTGTGCTCTTaGTTCTTGCATGCTCCCATG +
Preference number: 5 (lower is better)
Translates to: NILHPTHPTQILLYSSHSALLCS*FLHAPM
Trigger: CATGGGAGCATGCAAGAACAAAGAGCACAGCAAAGC...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFYTRVE*EIPCLD
Trigger: ATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATA...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp CAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCGCTTATATACCAGAGTaGAGTTGGAAATCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: QYTSSYPSHPNLTLLISFAYIPE*SWKSPA
Trigger: GGCAGGGGATTTCCAACTCAACTCTGGTATATAAGC...GAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTTGTGTTTGTCCAGCTTaGCTGTGCTCTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AIYFILPIPPKSYSTHLICVCPA*LCSLFL
Trigger: CAAGAACAAAGAGCACAGCAAAGCTGGACAAACACA...AATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGCCTGGATTGCTGTGTTaGTCCAGCTTTGCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: THLILINFGKSSEDVFVEPGLLC*SSFAVL
Trigger: GAGCACAGCAAAGCTGGACAAACACAGCAATCCAGG...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTTATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: NILHPTHPTQILLYSSHSYTRVE*EIPCLD
Trigger: ATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATA...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGCTTATATACCAGAGTaGAGTTGGAAATCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: NILHPTHPTQILLYSSHSAYIPE*SWKSPA
Trigger: GGCAGGGGATTTCCAACTCAACTCTGGTATATAAGC...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCAGACAGAAAAAGGACTTaGCATGCAGCTTATATACCA +
Preference number: 5 (lower is better)
Translates to: GQYTSSYPSHPNLTLLISDRKRT*HAAYIP
Trigger: TGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTC...TGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp GTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCGACAGAAAAAGGACTTaGCATGCAGCTTATATACCA +
Preference number: 5 (lower is better)
Translates to: VGQYTSSYPSHPNLTLLIDRKRT*HAAYIP
Trigger: TGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTC...GATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AGTTGGGCAATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATGACAGAAAAAGGACTTaGCATGCAGCTTATATACCA +
Preference number: 5 (lower is better)
Translates to: SWAIYFILPIPPKSYSTHDRKRT*HAAYIP
Trigger: TGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTC...ATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATTGCCCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: THLILINFGKSSEDVFVEYTRVE*EIPCLD
Trigger: ATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGGCTTATATACCAGAGTaGAGTTGGAAATCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: THLILINFGKSSEDVFVEAYIPE*SWKSPA
Trigger: GGCAGGGGATTTCCAACTCAACTCTGGTATATAAGC...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGTGTGTTTGTCCAGCTTaGCTGTGCTCTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: THLILINFGKSSEDVFVECVCPA*LCSLFL
Trigger: CAAGAACAAAGAGCACAGCAAAGCTGGACAAACACA...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp AATATACTTCATCCTACCCATCCCACCCAAATCTTACTCTACTCATCTCATTCTGACAGAAAAAGGACTTaGCATGCAGCTTATATACCA +
Preference number: 5 (lower is better)
Translates to: NILHPTHPTQILLYSSHSDRKRT*HAAYIP
Trigger: TGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTC...AGAATGAGATGAGTAGAGTAAGATTTGGGTGGGATGGGTAGGATGAAGTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS-3UTR CAA 90 bp ACTCATCTCATTCTCATTAATTTTGGGAAATCATCAGAAGATGTGTTCGTTGAGAATTCCAAGCTGGCTTaGAATGCTCTATTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: THLILINFGKSSEDVFVENSKLA*NALFCL
Trigger: AAGGCAAAATAGAGCATTCAAAGCCAGCTTGGAATT...CTCAACGAACACATCTTCTGATGATTTCCCAAAATTAATGAGAATGAGATGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377050.5
CDS GCA 72 bp TGCAGCTTATATACCAGAGTTGAGTTGGAAATCCCCTaGCTGGATTGCTGTGTTTGTCCAGCTTTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: CSLYTRVELEIP*LDCCVCPALLC
Trigger: GCACAGCAAAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS CCA 72 bp GCTTATATACCAGAGTTGAGTTGGAAATCCCCTGCCTaGATTGCTGTGTTTGTCCAGCTTTGCTGTGCTCTT +
Preference number: 6 (lower is better)
Translates to: AYIPELSWKSPA*IAVFVQLCCAL
Trigger: AAGAGCACAGCAAAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS CAA 90 bp AGACAGAAAAAGGACTTTGCATGCAGCTTATATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGATTGCTGTGTTTGTCCAGCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: RQKKDFACSLYTRVE*EIPCLDCCVCPALL
Trigger: CAGCAAAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS CAA 90 bp ACCAGAGACAGAAAAAGGACTTTGCATGCAGCTTATATACCAGAGTaGAGTTGGAAATCCCCTGCCTGGATTGCTGTGTTTGTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: TRDRKRTLHAAYIPE*SWKSPAWIAVFVQL
Trigger: AAGCTGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTTCTGTCTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS CAA 72 bp AAGGACTTTGCATGCAGCTTATATACCAGAGTTGAGTaGGAAATCCCCTGCCTGGATTGCTGTGTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: KDFACSLYTRVE*EIPCLDCCVCP
Trigger: TGGACAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2
CDS TCA 72 bp GAAAAAGGACTTTGCATGCAGCTTATATACCAGAGTTaGGTTGGAAATCCCCTGCCTGGATTGCTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: EKGLCMQLIYQS*VGNPLPGLLCL
Trigger: CAAACACAGCAATCCAGGCAGGGGATTTCCAACTCAACTCTGGTATATAAGCTGCATGCAAAGTCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383547.3
ENST00000383641.2
ENST00000414436.2
ENST00000421519.2
ENST00000429935.2
ENST00000432676.2