Pregenerated sensors for UBC (Homo sapiens)
Ensembl gene IDs: ENSG00000150991Ensembl transcript IDs: ENST00000535859.1, ENST00000536661.1, ENST00000536769.1, ENST00000538617.5, ENST00000540351.1, ENST00000540700.1, ENST00000541645.1, ENST00000542416.1, ENST00000546271.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCCAGTTCAGGGCAACCTTGCTCGCGGACCCAGACTACAGCCCTTaGCGGTCTCTCCACACGCCTCCGTCCCACCGAGCGGCCCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: PQFRATLLADPDYSP*RSLHTPPSHRAARR Trigger: CCGCCGGGCCGCTCGGTGGGACGGAGGCGTGTGGAGAGACCGCCAAGGGCTGTAGTCTGGGTCCGCGAGCAAGGTTGCCCTGAACTGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540700.1 |
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| CDS GCA 90 bp | GTGACGTCACGACACGACGAGGGCGCGCGCTCCCAAAGGTACGGGTaGACTGCCCAACGGCACCGCCATAACTGCCGCCCCCGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: VTSRHDEGARSQRYG*TAQRHRHNCRPRNR Trigger: TCTGTTGCGGGGGCGGCAGTTATGGCGGTGCCGTTGGGCAGTGCACCCGTACCTTTGGGAGCGCGCGCCCTCGTCGTGTCGTGACGTCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000535859.1 ENST00000536769.1 |
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| CDS TCA 90 bp | ACTGGGGTTCTAAGGCCGAGTCTTATGAGCAGCGGGCCGCTGTCCTaGGCGTCCGGGCGGAAGGATCAGGACGCTCGCTGCGCCCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: TGVLRPSLMSSGPLS*ASGRKDQDARCALR Trigger: ACGAAGGGCGCAGCGAGCGTCCTGATCCTTCCGCCCGGACGCTCAGGACAGCGGCCCGCTGCTCATAAGACTCGGCCTTAGAACCCCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536661.1 ENST00000536769.1 |
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| CDS GCA 90 bp | CCTGTCGATTCAGGAGAGCCTACCCTAGGCCCGAACCCTGCGTCCTaGGACGGAGAAAAGCCTACCGCACACCTACCGGCAGGTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PVDSGEPTLGPNPAS*DGEKPTAHLPAGGP Trigger: GGGGCCACCTGCCGGTAGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGGTAGGCTCTCCTGAATCGACAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540351.1 |
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| CDS GCA 90 bp | TCCGGCGCCTGTCGATTCAGGAGAGCCTACCCTAGGCCCGAACCCTaGGTCCTGCGACGGAGAAAAGCCTACCGCACACCTACCGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SGACRFRRAYPRPEP*VLRRRKAYRTPTGR Trigger: CCTGCCGGTAGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGGTAGGCTCTCCTGAATCGACAGGCGCCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540351.1 |
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| CDS TCA 90 bp | TACCGGCAGGTGGCCCCACCCTGCATTATAAGCCAACAGAACGGGTaGCGTCACGACACGACGAGGGCGCGCGCTCCCAAAGGTACGGGT | + |
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Preference number: 5 (lower is better) Translates to: YRQVAPPCIISQQNG*RHDTTRARAPKGTG Trigger: ACCCGTACCTTTGGGAGCGCGCGCCCTCGTCGTGTCGTGACGTCACCCGTTCTGTTGGCTTATAATGCAGGGTGGGGCCACCTGCCGGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536769.1 |
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| CDS TCA 90 bp | TGTCGGCAGGTGGCCCCACCCTGCATTATAAGCCAACAGAACGGGTaGCGTCACGACACGACGAGGGCGCGCGCTCCCAAAGGTACGGGT | + |
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Preference number: 5 (lower is better) Translates to: CRQVAPPCIISQQNG*RHDTTRARAPKGTG Trigger: ACCCGTACCTTTGGGAGCGCGCGCCCTCGTCGTGTCGTGACGTCACCCGTTCTGTTGGCTTATAATGCAGGGTGGGGCCACCTGCCGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535859.1 |
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| CDS GCA 90 bp | GTCTTCACGAAGATCTGCATTGTCCTAGGCCCGAACCCTGCGTCCTaGGACGGAGAAAAGCCTACCGCACACCTACCGGCAGGTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: VFTKICIVLGPNPAS*DGEKPTAHLPAGGP Trigger: GGGGCCACCTGCCGGTAGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGACAATGCAGATCTTCGTGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541645.1 |
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| CDS TCA 90 bp | GGCCACGAAAGCCCCGGCCAGCCCAGCAGCCCGCTACTCACCAAGTaGCGATCACAGCGATCCACAAACAAGAACTGCGACCCAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: GHESPGQPSSPLLTK*RSQRSTNKNCDPNP Trigger: GGGATTTGGGTCGCAGTTCTTGTTTGTGGATCGCTGTGATCGTCACTTGGTGAGTAGCGGGCTGCTGGGCTGGCCGGGGCTTTCGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536769.1 |
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| CDS GCA 90 bp | CGCATTAGCGAAGGCCTCAAGACCTTGGGTTCTTGCCGCCCACCATaGCCCCCACCTTGTTTCAACGACCTCACAGCCCGCCTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: RISEGLKTLGSCRPP*PPPCFNDLTARLTS Trigger: GCTTGTGAGGCGGGCTGTGAGGTCGTTGAAACAAGGTGGGGGGCATGGTGGGCGGCAAGAACCCAAGGTCTTGAGGCCTTCGCTAATGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000546271.1 |
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| CDS GCA 90 bp | CGTTCCACCCACAGATCCGTCCTTTGCAGGCGCCCCAGAAAAGATTaGTTCAGAGCTGGCACCAATGGAGAAGGGACAGAGGCCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: RSTHRSVLCRRPRKD*FRAGTNGEGTEAQQ Trigger: TTGCTGGGCCTCTGTCCCTTCTCCATTGGTGCCAGCTCTGAAGCAATCTTTTCTGGGGCGCCTGCAAAGGACGGATCTGTGGGTGGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542416.1 |
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| CDS GCA 90 bp | CGATCACAGCGATCCACAAACAAGAACTGCGACCCAAATCCCGGCTaGGACGGAACTAGCTGTGCCACACCCGGCGCGTCCTTATATAAT | + |
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Preference number: 5 (lower is better) Translates to: RSQRSTNKNCDPNPG*DGTSCATPGASLYN Trigger: ATTATATAAGGACGCGCCGGGTGTGGCACAGCTAGTTCCGTCGCAGCCGGGATTTGGGTCGCAGTTCTTGTTTGTGGATCGCTGTGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536661.1 ENST00000536769.1 ENST00000538617.5 ENST00000542416.1 |
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| CDS CCA 90 bp | CCGAGTTCTCCAGTCAGTGACAAACTTCACGTCAGGGTCCCCAGATaGTGCCCCAGCCCATCTCACCCGAATAAGAGCTTTCCCGCATTA | + |
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Preference number: 5 (lower is better) Translates to: PSSPVSDKLHVRVPR*CPSPSHPNKSFPAL Trigger: TAATGCGGGAAAGCTCTTATTCGGGTGAGATGGGCTGGGGCACCATCTGGGGACCCTGACGTGAAGTTTGTCACTGACTGGAGAACTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536769.1 |
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| CDS CCA 90 bp | CCTCGCCTGTTCCGCTCTCCTGCGAGATGGACGGGTCTTTATTTTTaGGTCACATTTGAGGTAATGACGGGGCTTCCTTTGCTCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PRLFRSPARWTGLYF*VTFEVMTGLPLLSP Trigger: GGGGCTGAGCAAAGGAAGCCCCGTCATTACCTCAAATGTGACCCAAAAATAAAGACCCGTCCATCTCGCAGGAGAGCGGAACAGGCGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000538617.5 |
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| CDS CCA 90 bp | CTAGAATGCGATGTGCTAGAATGTGCAAGAATCGGGATGAGTCACTaGATCCGTTTTCAGTTCGTTCCACCCACAGATCCGTCCTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LECDVLECARIGMSH*IRFQFVPPTDPSFA Trigger: TGCAAAGGACGGATCTGTGGGTGGAACGAACTGAAAACGGATCCAGTGACTCATCCCGATTCTTGCACATTCTAGCACATCGCATTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542416.1 |
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| CDS CCA 72 bp | GTCCCCTCGGGTCGCGAACCCCGCGTTCGGCGGACGTaGGGCACGCAGCGAGCGCCTTCTGCAGAGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: VPSGREPRVRRT*GTQRAPSAESG Trigger: CCCCGACTCTGCAGAAGGCGCTCGCTGCGTGCCCCACGTCCGCCGAACGCGGGGTTCGCGACCCGAGGGGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536769.1 |
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| CDS CAA 90 bp | CCCCCAGTTCAGGGCAACCTTGCTCGCGGACCCAGACTACAGCCCTaGGCGGTCTCTCCACACGCCTCCGTCCCACCGAGCGGCCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: PPVQGNLARGPRLQP*AVSPHASVPPSGPA Trigger: CGCCGGGCCGCTCGGTGGGACGGAGGCGTGTGGAGAGACCGCCAAGGGCTGTAGTCTGGGTCCGCGAGCAAGGTTGCCCTGAACTGGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540700.1 |
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| CDS GCA 72 bp | CGACACGACGAGGGCGCGCGCTCCCAAAGGTACGGGTaGACTGCCCAACGGCACCGCCATAACTGCCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RHDEGARSQRYG*TAQRHRHNCRP Trigger: GGGGCGGCAGTTATGGCGGTGCCGTTGGGCAGTGCACCCGTACCTTTGGGAGCGCGCGCCCTCGTCGTGTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000535859.1 ENST00000536769.1 |
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| CDS CCA 72 bp | AGGGCAACCTTGCTCGCGGACCCAGACTACAGCCCTTaGCGGTCTCTCCACACGCCTCCGTCCCACCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RATLLADPDYSP*RSLHTPPSHRA Trigger: CGCTCGGTGGGACGGAGGCGTGTGGAGAGACCGCCAAGGGCTGTAGTCTGGGTCCGCGAGCAAGGTTGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540700.1 |
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| CDS CAA 72 bp | CAGGGCAACCTTGCTCGCGGACCCAGACTACAGCCCTaGGCGGTCTCTCCACACGCCTCCGTCCCACCGAGC | + |
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Preference number: 6 (lower is better) Translates to: QGNLARGPRLQP*AVSPHASVPPS Trigger: GCTCGGTGGGACGGAGGCGTGTGGAGAGACCGCCAAGGGCTGTAGTCTGGGTCCGCGAGCAAGGTTGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540700.1 |
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| CDS TCA 72 bp | CTAAGGCCGAGTCTTATGAGCAGCGGGCCGCTGTCCTaGGCGTCCGGGCGGAAGGATCAGGACGCTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRPSLMSSGPLS*ASGRKDQDARC Trigger: GCAGCGAGCGTCCTGATCCTTCCGCCCGGACGCTCAGGACAGCGGCCCGCTGCTCATAAGACTCGGCCTTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536661.1 ENST00000536769.1 |
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| CDS GCA 72 bp | TCAGGAGAGCCTACCCTAGGCCCGAACCCTGCGTCCTaGGACGGAGAAAAGCCTACCGCACACCTACCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SGEPTLGPNPAS*DGEKPTAHLPA Trigger: TGCCGGTAGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGGTAGGCTCTCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540351.1 |
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| CDS GCA 72 bp | AGGTACGGGTGCACTGCCCAACGGCACCGCCATAACTaGCGCCCCCGCAACAGACGACAAACCGAGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RYGCTAQRHRHN*RPRNRRQTEFS Trigger: GGAGAACTCGGTTTGTCGTCTGTTGCGGGGGCGGCAGTTATGGCGGTGCCGTTGGGCAGTGCACCCGTACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000535859.1 ENST00000536769.1 |
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| CDS TCA 72 bp | GTGGCCCCACCCTGCATTATAAGCCAACAGAACGGGTaGCGTCACGACACGACGAGGGCGCGCGCTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VAPPCIISQQNG*RHDTTRARAPK Trigger: TTTGGGAGCGCGCGCCCTCGTCGTGTCGTGACGTCACCCGTTCTGTTGGCTTATAATGCAGGGTGGGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000535859.1 ENST00000536769.1 |
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| CDS GCA 72 bp | CGATCCACAAACAAGAACTGCGACCCAAATCCCGGCTaGGACGGAACTAGCTGTGCCACACCCGGCGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RSTNKNCDPNPG*DGTSCATPGAS Trigger: GGACGCGCCGGGTGTGGCACAGCTAGTTCCGTCGCAGCCGGGATTTGGGTCGCAGTTCTTGTTTGTGGATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000536661.1 ENST00000536769.1 ENST00000538617.5 ENST00000542416.1 |
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| CDS GCA 72 bp | GAAGGCCTCAAGACCTTGGGTTCTTGCCGCCCACCATaGCCCCCACCTTGTTTCAACGACCTCACAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: EGLKTLGSCRPP*PPPCFNDLTAR Trigger: GCGGGCTGTGAGGTCGTTGAAACAAGGTGGGGGGCATGGTGGGCGGCAAGAACCCAAGGTCTTGAGGCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000546271.1 |
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| CDS GCA 72 bp | TGTCGATTCAGGAGAGCCTACCCTAGGCCCGAACCCTaGGTCCTGCGACGGAGAAAAGCCTACCGCACACCT | + |
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Preference number: 6 (lower is better) Translates to: CRFRRAYPRPEP*VLRRRKAYRTP Trigger: AGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGGTAGGCTCTCCTGAATCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536769.1 ENST00000540351.1 |
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| CDS GCA 72 bp | AAGATCTGCATTGTCCTAGGCCCGAACCCTGCGTCCTaGGACGGAGAAAAGCCTACCGCACACCTACCGGCA | + |
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Preference number: 6 (lower is better) Translates to: KICIVLGPNPAS*DGEKPTAHLPA Trigger: TGCCGGTAGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGACAATGCAGATCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541645.1 |
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| CDS TCA 72 bp | CCCCGCAACAGACGACAAACCGAGTTCTCCAGTCAGTaGCAAACTTCACGTCAGGGTCCCCAGATGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PRNRRQTEFSSQ*QTSRQGPQMVP Trigger: GGGCACCATCTGGGGACCCTGACGTGAAGTTTGTCACTGACTGGAGAACTCGGTTTGTCGTCTGTTGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000535859.1 ENST00000536769.1 |
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| CDS GCA 72 bp | CTTCACGAAGATCTGCATTGTCCTAGGCCCGAACCCTaGGTCCTGCGACGGAGAAAAGCCTACCGCACACCT | + |
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Preference number: 6 (lower is better) Translates to: LHEDLHCPRPEP*VLRRRKAYRTP Trigger: AGGTGTGCGGTAGGCTTTTCTCCGTCGCAGGACGCAGGGTTCGGGCCTAGGACAATGCAGATCTTCGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000541645.1 |
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| CDS CCA 72 bp | CCAGTCAGTGACAAACTTCACGTCAGGGTCCCCAGATaGTGCCCCAGCCCATCTCACCCGAATAAGAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PVSDKLHVRVPR*CPSPSHPNKSF Trigger: AAAGCTCTTATTCGGGTGAGATGGGCTGGGGCACCATCTGGGGACCCTGACGTGAAGTTTGTCACTGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536769.1 |
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| CDS CCA 72 bp | GATGTGCTAGAATGTGCAAGAATCGGGATGAGTCACTaGATCCGTTTTCAGTTCGTTCCACCCACAGATCCG | + |
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Preference number: 6 (lower is better) Translates to: DVLECARIGMSH*IRFQFVPPTDP Trigger: CGGATCTGTGGGTGGAACGAACTGAAAACGGATCCAGTGACTCATCCCGATTCTTGCACATTCTAGCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542416.1 |
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| CDS GCA 72 bp | CCTGTTCCGCTCTCTAGAATGCGATGTGCTAGAATGTaGAAGAATCGGGATGAGTCACTGGATCCGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PVPLSRMRCARM*KNRDESLDPFS Trigger: TGAAAACGGATCCAGTGACTCATCCCGATTCTTGCACATTCTAGCACATCGCATTCTAGAGAGCGGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542416.1 |
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