RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBASH3A (Homo sapiens)

Ensembl gene IDs: ENSG00000160185

Ensembl transcript IDs: ENST00000291535.11, ENST00000319294.11, ENST00000398367.1, ENST00000473381.1, ENST00000634453.1, ENST00000634718.1, ENST00000635108.1, ENST00000635189.1, ENST00000635325.1

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACTCGGTGTACATGCTGCAGGGCGGCATCCTCACCCAGCCACCTaGCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACA +
Preference number: 1 (lower is better)
Translates to: TLGVHAAGRHPHPAT*PVLPAAGLVDDGST
Trigger: TGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGTGGCTGGGTGAGGATGCCGCCCTGCAGCATGTACACCGAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CCA 90 bp GCCGTCTGCACACAGCGGAGGGCTCTGAGTGGGGCCCTGGGCGAGTaGGCCGTGGGGGTCTCTGCAGTTAACCATTGGTGTAACTTGCTT +
Preference number: 1 (lower is better)
Translates to: AVCTQRRALSGALGE*AVGVSAVNHWCNLL
Trigger: AAGCAAGTTACACCAATGGTTAACTGCAGAGACCCCCACGGCCCACTCGCCCAGGGCCCCACTCAGAGCCCTCCGCTGTGTGCAGACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR TCA 90 bp GGCAGCCCGAGCAGTGGCCGCGTGCAGGAGTCCAGAGTGGAGCCGTaGCTCACAATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTG +
Preference number: 1 (lower is better)
Translates to: GSPSSGRVQESRVEP*LTIRMTPVSCGQVL
Trigger: CAACACCTGTCCACAGGACACGGGTGTCATCCTAATTGTGAGTCACGGCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR TCA 90 bp TCGCCGTGCACCTGTCCATGTACTCCTGGTAGCTCTCGGCCGGCATaGGGGCGGACAGGGGAAACGCGGGCCTGTAATCAGTGTCAATGT +
Preference number: 1 (lower is better)
Translates to: SPCTCPCTPGSSRPA*GRTGETRACNQCQC
Trigger: ACATTGACACTGATTACAGGCCCGCGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCTACCAGGAGTACATGGACAGGTGCACGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR CCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATaGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATAT +
Preference number: 1 (lower is better)
Translates to: PCAPRSWAGGRWVHR*ELQRRKPEGNIPGY
Trigger: ATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR TCA 90 bp CTCCCAGCCTCTGCACATGGTTTCTGCCTCTCCACTCTGAGGTTATaGCAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTC +
Preference number: 1 (lower is better)
Translates to: LPASAHGFCLSTLRL*QHHRGSQLPEIQFL
Trigger: GAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR CCA 90 bp ACTAAGACGCCTCTGGAAACAGCAGCATCTCCCAGCCTCTGCACATaGTTTCTGCCTCTCCACTCTGAGGTTATGACAACATCACCGTGG +
Preference number: 1 (lower is better)
Translates to: TKTPLETAASPSLCT*FLPLHSEVMTTSPW
Trigger: CCACGGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR GCA 90 bp GGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCCCAGCCTCTaGACATGGTTTCTGCCTCTCCACTCTGAGGTTATGACAACATCA +
Preference number: 1 (lower is better)
Translates to: GETKTPLETAASPSL*TWFLPLHSEVMTTS
Trigger: TGATGTTGTCATAACCTCAGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CCA 90 bp GTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTaGAAACAGCAGCATCTCCCAGCCTCTGCACATGGTTTCTGCCTC +
Preference number: 1 (lower is better)
Translates to: VSCFYKSHWVRLRRL*KQQHLPASAHGFCL
Trigger: GAGGCAGAAACCATGTGCAGAGGCTGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR GCA 90 bp GTCACAGAGTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTCTCTCCAGAACTCTTGAAGTTTTTC +
Preference number: 1 (lower is better)
Translates to: VTECHVWEDLMSSVL*TLALALSPELLKFF
Trigger: GAAAAACTTCAAGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR CCA 90 bp AATGTTGAAATTTGCCTCTTTCAGCTCTTCCAGGCTCATGAGGGTTaGGGTGGTTTTGCCAGCTTCCCATTTTGTCCATTCAAAGATTCC +
Preference number: 1 (lower is better)
Translates to: NVEICLFQLFQAHEG*GGFASFPFCPFKDS
Trigger: GGAATCTTTGAATGGACAAAATGGGAAGCTGGCAAAACCACCCCAACCCTCATGAGCCTGGAAGAGCTGAAAGAGGCAAATTTCAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR GCA 90 bp GACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTGATGGAGGAGTGCGTACCCTACACCCCTaGAGCTCCATGCCGGGGGCC +
Preference number: 2 (lower is better)
Translates to: DVCGAATDEEAEVADGGVRTLHP*SSMPGA
Trigger: GGCCCCCGGCATGGAGCTGCAGGGGTGTAGGGTACG...CACTCCTCCATCAGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR TCA 90 bp CAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCGCGGGCCTGGAAGGATaGGAAGGAGAGGCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: QLNAAFAPWVRVFTGGFTAGLEG*EGEAAA
Trigger: GGCAGCAGCCTCTCCTTCTCATCCTTCCAGGCCCGC...GGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
3UTR-3UTR GCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGGCATCTCCCAGCCTCTaGACATGGTTTCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGASPSL*TWFLPL
Trigger: GAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGC...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR GCA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCGAGCAGTGGCCGCGTaGAGGAGTCCAGAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHRAVAA*RSPEWS
Trigger: GCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCG...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR-3UTR GCA 90 bp GGATGGGGTCGTCTAGGGAAGGGTCATTGCAATGATCATGCAGCCAGGCCAAGGACCCCTGCAGCTCCATaGCGGGGGCCGCAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GWGRLGKGHCNDHAARPRTPAAP*RGPQQG
Trigger: ACCCTGCTGCGGCCCCCGGCATGGAGCTGCAGGGGT...CCTTGGCCTGGCTGCATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR CCA 90 bp GAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCACCAGCCTTACTGGCTaGGCCCCGGGGTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: EPVSSSLQRLVQAFHLLVTSLTG*APGSLG
Trigger: GCCCAGAGACCCCGGGGCCCAGCCAGTAAGGCTGGT...GACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR CCA 90 bp GGCTGCCAACGCTTTCAGCCCTGCAAGGTGCACTGCTTTGGCAGGAAGCCGTACGGCCGCAGCAGGGTCTaGCACCAGCCTTACTGGCTG +
Preference number: 2 (lower is better)
Translates to: GCQRFQPCKVHCFGRKPYGRSRV*HQPYWL
Trigger: CAGCCAGTAAGGCTGGTGCCAGACCCTGCTGCGGCC...GTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTTGGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR TCA 90 bp CGTGGCGAAGGTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGGGTCATTGCAATaGTCATGCAGCCAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: RGEGHGEFPDDVCGAATDEGSLQ*SCSQAK
Trigger: CTTGGCCTGGCTGCATGATCATTGCAATGACCCTTC...GTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR GCA 90 bp GTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGCAACGCTTTCAGCCCTaGAAGGTGCACTGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: VMANSRMTSAGLPLTKKPQRFQP*KVHCFG
Trigger: GCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTTG...CGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR TCA 90 bp TTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCACAGCGGAGGGCTCTaGGTGGGGCCCTGGGCGAGT +
Preference number: 2 (lower is better)
Translates to: FTEAHAQGRDLSHELGKIHSGGL*VGPWAS
Trigger: ACTCGCCCAGGGCCCCACTCAGAGCCCTCCGCTGTG...GATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR GCA 90 bp AGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGCCCTGCAAGGTGCACTaGTTTGGCAGGAAGCCGTAC +
Preference number: 2 (lower is better)
Translates to: RSLSPALFSASYRHSTFWPCKVH*FGRKPY
Trigger: GTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGG...CCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR CCA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGCTGCGTTCGCCCCGTaGGTCAGGGTCTTCACCGGT +
Preference number: 2 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPAAFAP*VRVFTG
Trigger: ACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGC...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR-3UTR CCA 90 bp GACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAACTCTGGCACCAGCCTTACTaGCTGGGCCCCGGGGTCTCT +
Preference number: 2 (lower is better)
Translates to: DLMSSVLCTLALALSPELWHQPY*LGPGVS
Trigger: AGAGACCCCGGGGCCCAGCCAGTAAGGCTGGTGCCA...GAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR TCA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACGACTCACAATTAGGATaGCACCCGTGTCCTGTGGAC +
Preference number: 2 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHDSQLG*HPCPVD
Trigger: GTCCACAGGACACGGGTGTCATCCTAATTGTGAGTC...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR-3UTR TCA 90 bp GACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTGATGGAGGAGTGTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACAC +
Preference number: 2 (lower is better)
Translates to: DVCGAATDEEAEVADGGVCGKTS*ALFFAH
Trigger: GTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACA...CACTCCTCCATCAGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR-3UTR CCA 90 bp TATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCGGCAGCCCGAGCAGTaGCCGCGTGCAGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: YFLHRSTCPGKGSFSRVGRQPEQ*PRAGVQ
Trigger: CTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCCG...CCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR-3UTR CCA 90 bp GACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAACTCCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: DLMSSVLCTLALALSPELPSSSP*LPTLSA
Trigger: GGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...GAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGACCGTGGCTCTCAGTTaGCTGAGATCCAGTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRTVALS*LRSSSS
Trigger: GGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGT...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
3UTR-3UTR GCA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAACCGTGGCTCTCAGTTaGCTGAGATCCAGTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LVDDGSTDGSYKGESRRETVALS*LRSSSS
Trigger: GGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGT...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCAGGTGTTGACGATTTaGACCATGCTCGCCGTGCAC +
Preference number: 2 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRQVLTI*TMLAVH
Trigger: GTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR-3UTR GCA 90 bp GAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: EFPDDVCGAATDEEAEVAMSSVL*TLALAL
Trigger: GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCAT...AGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR-3UTR TCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGTCTGCCTCTCCACTCTaGGGTTATGACAACATCACC +
Preference number: 2 (lower is better)
Translates to: WAGGRWVHRWELQRRKPESASPL*GYDNIT
Trigger: GGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGA...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR TCA 90 bp TCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGGTTCGAGGTTCTCACTaGCCTTCCAGGATGAGTTTG +
Preference number: 2 (lower is better)
Translates to: SCGQVLTICTMLAVHLSMVRGSH*PSRMSL
Trigger: CAAACTCATCCTGGAAGGTCAGTGAGAACCTCGAAC...CATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR TCA 90 bp CCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCTTCTCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: PVSSSLQRLVQAFHLLVFSLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...GAAGACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR-3UTR GCA 90 bp GGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATACCTCCAGTTAAATGCTaGGTTCGCCCCGTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: GPQMGVTKAKAGGKYSGIPPVKC*VRPVGQ
Trigger: CTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG...TATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR GCA 90 bp AGCGCCTCGTACAGGCATTCCACCTTCTGGTCTTCACACGTGAAGAAGTCACAGTTCAGCCCTGCAAGGTaGACTGCTTTGGCAGGAAGC +
Preference number: 2 (lower is better)
Translates to: SASYRHSTFWSSHVKKSQFSPAR*TALAGS
Trigger: GCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAA...CTGTGACTTCTTCACGTGTGAAGACCAGAAGGTGGAATGCCTGTACGAGGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR CCA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACTTCTACAAATCACATTaGGTGAGACTAAGACGCCTC +
Preference number: 2 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHFYKSH*VRLRRL
Trigger: GAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CCA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCTGGGCTGGTGGACGATaGGTCCACAGATGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLWAGGR*VHRWEL
Trigger: TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAACCGCAGCTGGGCTGGTaGACGATGGGTCCACAGATG +
Preference number: 2 (lower is better)
Translates to: TDGSYKGESRREIFRDIKPQLGW*TMGPQM
Trigger: CATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGG...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR GCA 90 bp TTCTCACTGACCTTCCAGGATGAGTTTGGCCGTCTGCACACAGCGGAGGGCTCTCTCTTGTTCTTTCCATaGCTTTCTTTCATTCCTGCC +
Preference number: 2 (lower is better)
Translates to: FSLTFQDEFGRLHTAEGSLLFFP*LSFIPA
Trigger: GGCAGGAATGAAAGAAAGGCATGGAAAGAACAAGAG...AGAGCCCTCCGCTGTGTGCAGACGGCCAAACTCATCCTGGAAGGTCAGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR GCA 90 bp CTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATATGAGAAGGAGAGGCTaGTGCCCTGGCACTTTCGTA +
Preference number: 2 (lower is better)
Translates to: LHRSTCPGKGSFSRVGQNMRRRG*CPGTFV
Trigger: TACGAAAGTGCCAGGGCAGCAGCCTCTCCTTCTCAT...ATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
3UTR-3UTR CCA 90 bp TCCAGTTTGAGTTCGAGGTTCTCACTGACCTTCCAGGATGAGTTTGGCCGTCTGCGATGGGTCCACAGATaGGAGTTACAAAGGCGAAAG +
Preference number: 2 (lower is better)
Translates to: SSLSSRFSLTFQDEFGRLRWVHR*ELQRRK
Trigger: CTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCG...CAGACGGCCAAACTCATCCTGGAAGGTCAGTGAGAACCTCGAACTCAAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR GCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGACACTCGGTGTACATaGTGCAGGGCGGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: TDGSYKGESRREIFRDIKDTRCT*CRAASS
Trigger: TGAGGATGCCGCCCTGCAGCATGTACACCGAGTGTC...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR GCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAGTTCCTCCAGTTAAATaGTGCGTTCGCCCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKVPPVK*CVRPVG
Trigger: ACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCCCAGCCTCTGCACATaGTTTCTGCCTCTCCACTCT +
Preference number: 2 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASPSLCT*FLPLHS
Trigger: AGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGG...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CAA 90 bp AGTCACAGAGTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCTCTCTCCAGAACTCTTGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: SHRVSRVGRPHELCS*HTGACSLSRTLEVF
Trigger: AAAAACTTCAAGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR-3UTR TCA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCTTTCCATTTGAAAAGTaGGCTCCTTGGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLFPFEK*APWSSL
Trigger: CAAGGAGCTCCAAGGAGCTCACTTTTCAAATGGAAA...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTCCCAGCCTCTGCACATaGTTTCTGCCTCTCCACTCT +
Preference number: 2 (lower is better)
Translates to: FRDIKVRLVLLQITLGETPSLCT*FLPLHS
Trigger: AGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGG...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CAA 90 bp ATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATaGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: IFRDIKVRLVLLQIT*GETKTPLETAASPS
Trigger: GCTGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR TCA 90 bp CGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATGGCTCTCAGTTGCCTaGGATCCAGTTCCTCCAGTT +
Preference number: 2 (lower is better)
Translates to: RREIFRDIKVRLVLLQITWLSVA*DPVPPV
Trigger: AACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCA...TGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR TCA 90 bp CGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATCTGCCTCTCCACTCTaGGGTTATGACAACATCACC +
Preference number: 2 (lower is better)
Translates to: RREIFRDIKVRLVLLQITSASPL*GYDNIT
Trigger: GGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGA...TGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR GCA 90 bp AGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGCATCTCCCAGCCTCTaGACATGGTTTCTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: REIFRDIKVRLVLLQITLASPSL*TWFLPL
Trigger: GAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGC...CAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR CCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAAGACTAAGACGCCTCTaGAAACAGCAGCATCTCCCA +
Preference number: 2 (lower is better)
Translates to: TDGSYKGESRREIFRDIKRLRRL*KQQHLP
Trigger: TGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCT...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR CCA 90 bp ACCATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTTGGGCTGGTGGACGATaGGTCCACAGATGGGAGTTA +
Preference number: 2 (lower is better)
Translates to: TMENEVVRSFVCGESLIPWAGGR*VHRWEL
Trigger: TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA...AGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
3UTR-3UTR CCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAATTCTACAAATCACATTaGGTGAGACTAAGACGCCTC +
Preference number: 2 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKFYKSH*VRLRRL
Trigger: GAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR TCA 90 bp ATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGAATCAGTGTCAATGTTaGAATTTGCCTCTTTCAGCT +
Preference number: 2 (lower is better)
Translates to: IFRDIKVRLVLLQITLGENQCQC*NLPLSA
Trigger: AGCTGAAAGAGGCAAATTTCAACATTGACACTGATT...CTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR GCA 72 bp CACATTCCCGGGGCGGCAGCCCGAGCAGTGGCCGCGTaGAGGAGTCCAGAGTGGAGCCGTGACTCACAATTA +
Preference number: 3 (lower is better)
Translates to: HIPGAAARAVAA*RSPEWSRDSQL
Trigger: TAATTGTGAGTCACGGCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCCGCCCCGGGAATGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR CCA 72 bp ACACAGCGGAGGGCTCTGAGTGGGGCCCTGGGCGAGTaGGCCGTGGGGGTCTCTGCAGTTAACCATTGGTGT +
Preference number: 3 (lower is better)
Translates to: TQRRALSGALGE*AVGVSAVNHWC
Trigger: ACACCAATGGTTAACTGCAGAGACCCCCACGGCCCACTCGCCCAGGGCCCCACTCAGAGCCCTCCGCTGTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR TCA 72 bp ACCTGTCCATGTACTCCTGGTAGCTCTCGGCCGGCATaGGGGCGGACAGGGGAAACGCGGGCCTGGAAGGAT +
Preference number: 3 (lower is better)
Translates to: TCPCTPGSSRPA*GRTGETRAWKD
Trigger: ATCCTTCCAGGCCCGCGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCTACCAGGAGTACATGGACAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635325.1
3UTR TCA 72 bp ACCTGTCCATGTACTCCTGGTAGCTCTCGGCCGGCATaGGGGCGGACAGGGGAAACGCGGGCCTGTAATCAG +
Preference number: 3 (lower is better)
Translates to: TCPCTPGSSRPA*GRTGETRACNQ
Trigger: CTGATTACAGGCCCGCGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCTACCAGGAGTACATGGACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR GCA 72 bp CGTGGCGAAGGTCATGGCGAATTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCT +
Preference number: 3 (lower is better)
Translates to: RGEGHGEFPDDV*GAATDEEAEVA
Trigger: AGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR GCA 72 bp ACTCCTGGGGGATGGGGTCGTCTAGGGAAGGGTCATTaGAATGATCATGCAGCCAGGCCAAGGCCTCCTCCG +
Preference number: 3 (lower is better)
Translates to: TPGGWGRLGKGH*NDHAARPRPPP
Trigger: CGGAGGAGGCCTTGGCCTGGCTGCATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCCCCCAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR CCA 72 bp CTGCCAACGCTTTCAGCCCTGCAAGGTGCACTGCTTTaGCAGGAAGCCGTACCCTACACCCCTGCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: LPTLSALQGALL*QEAVPYTPAAP
Trigger: TGGAGCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR TCA 72 bp AGCAGTGGCCGCGTGCAGGAGTCCAGAGTGGAGCCGTaGCTCACAATTAGGATGACACCCGTGTCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: SSGRVQESRVEP*LTIRMTPVSCG
Trigger: TCCACAGGACACGGGTGTCATCCTAATTGTGAGTCACGGCTCCACTCTGGACTCCTGCACGCGGCCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR-3UTR CAA 90 bp GGATGGGGTCGTCTAGGGAAGGGTCATTGCAATGATCATGCAGCCAGGCCAAGGGCAAGGTGCACTGCTTaGGCAGGAAGCCGTACCCTA +
Preference number: 3 (lower is better)
Translates to: GWGRLGKGHCNDHAARPRARCTA*AGSRTL
Trigger: TAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGC...CCTTGGCCTGGCTGCATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR CCA 72 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATaGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATT +
Preference number: 3 (lower is better)
Translates to: PRSWAGGRWVHR*ELQRRKPEGNI
Trigger: AATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR-3UTR CAA 90 bp CAGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 3 (lower is better)
Translates to: QEPVSSSLQRLVQAFHLLHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...CAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR GCA 72 bp ATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTaGACCATGCTCGCCGTGCACCTGTCCATGTACTCC +
Preference number: 3 (lower is better)
Translates to: MTPVSCGQVLTI*TMLAVHLSMYS
Trigger: GGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
3UTR CCA 72 bp CCGTTGGACAGAGGAAAAGGGCATACTCCTGGGGGATaGGGTCGTCTAGGGAAGGGTCATTGCAATGATCAT +
Preference number: 3 (lower is better)
Translates to: PLDRGKGHTPGG*GRLGKGHCNDH
Trigger: ATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATGCCCTTTTCCTCTGTCCAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR-3UTR CAA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATCTTCTACAAATCACATaGGGTGAGACTAAGACGCCT +
Preference number: 3 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHLLQIT*GETKTP
Trigger: AGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAG...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CAA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCCTTGGAGCTCCTTGGTaGTTGATTTTTCCTCCCCTC +
Preference number: 3 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLLGAPW*LIFPPL
Trigger: GAGGGGAGGAAAAATCAACAACCAAGGAGCTCCAAG...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR TCA 72 bp AAGAAGTCACAGAGTGTCACGTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCT +
Preference number: 3 (lower is better)
Translates to: KKSQSVTCGKTS*ALFFAHWRLLS
Trigger: AGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
3UTR CCA 72 bp GGCGAGTGGGCCGTGGGGGTCTCTGCAGTTAACCATTaGTGTAACTTGCTTCTCTGGATTCCATTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: GEWAVGVSAVNH*CNLLLWIPFSE
Trigger: TTCAGAAAATGGAATCCAGAGAAGCAAGTTACACCAATGGTTAACTGCAGAGACCCCCACGGCCCACTCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CAA 90 bp ATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGCACCGTGGCTCTCAGTaGCCTGAGATCCAGTTCCTC +
Preference number: 3 (lower is better)
Translates to: IFRDIKVRLVLLQITLGEHRGSQ*PEIQFL
Trigger: GAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTG...CTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CAA 90 bp ATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCGATGTGGTTTTCCATTaGAAAAGTGAGCTCCTTGGA +
Preference number: 3 (lower is better)
Translates to: IFFTEAHAQGRDLSHELGDVVFH*KSELLG
Trigger: TCCAAGGAGCTCACTTTTCAAATGGAAAACCACATC...GCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR-3UTR CAA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAGATCAAACCTCTACATaGCCACTTTCTTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKDQTST*PLSCCV
Trigger: CACACAGCAAGAAAGTGGCAATGTAGAGGTTTGATC...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp ATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGACCCCTGCAGCTCCATaGCGGGGGCCGCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: MANSRMTSAGLPLTKKPRTPAAP*RGPQQG
Trigger: ACCCTGCTGCGGCCCCCGGCATGGAGCTGCAGGGGT...CCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGPSSSP*LPTLSA
Trigger: CGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGCCGCAGCTGGGCTGGTaGACGATGGGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGPQLGW*TMGPQM
Trigger: CATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGG...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACTGCGGGGCTGCCACTaGCGAAGAAGCCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELLRGCH*RRSRGS
Trigger: GCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAG...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGCTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGLRLPR*HLFLPL
Trigger: TAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAG...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp AGCCCTGCAAGGTGCACTGCTTTGGCAGGAAGCCGTACCCTACACCCCTGCAGCCGTACCCTACACCCCTaGAGCTCCATGCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPARCTALAGSRTLHPCSRTLHP*SSMPGA
Trigger: GGCCCCCGGCATGGAGCTGCAGGGGTGTAGGGTACG...GCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp GGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGCGGCAGCCCGAGCAGTaGCCGCGTGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GWWTMGPQMGVTKAKAGGRQPEQ*PRAGVQ
Trigger: CTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCCG...CCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCCGGCAGCCCGAGCAGTaGCCGCGTGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LQLNAAFAPWVRVFTGGFRQPEQ*PRAGVQ
Trigger: CTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCCG...GAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTATCCCCGCAGCTGGGCTaGTGGACGATGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELSPQLG*WTMGPQ
Trigger: CTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGGGGCCCCGGGGTCTCTaGGCAGTACTCACGCGGTGT +
Preference number: 4 (lower is better)
Translates to: MANSRMTSAGLPLTKKPRGPRGL*AVLTRC
Trigger: ACACCGCGTGAGTACTGCCCAGAGACCCCGGGGCCC...CCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp CGTGGCGAAGGTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACTGGCACCAGCCTTACTaGCTGGGCCCCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RGEGHGEFPDDVCGAATDWHQPY*LGPGVS
Trigger: AGAGACCCCGGGGCCCAGCCAGTAAGGCTGGTGCCA...GTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp CAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAGCTCTCGGCCGGCATaGGGGCGGACAGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: QLNAAFAPWVRVFTGGFTSSRPA*GRTGET
Trigger: CGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCT...GGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGGCTTTCAGCGCGGTGTaGACCGGGAAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKAAFSAV*TGKPMA
Trigger: GGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGC...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGCCCCGCTGCATCTGCTaGTGGCTTCACCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGPRCIC*WLHHPF
Trigger: GAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGG...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGGCTTGTTGGAGACCTTaGCGTAGAGCTGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGACWRP*RRAASP
Trigger: GGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGC...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGACTGACCTTCCAGGATaGGTTTGGCCGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGTDLPG*VWPSAH
Trigger: GTGTGCAGACGGCCAAACTCATCCTGGAAGGTCAGT...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELLRLPR*HLFLPL
Trigger: TAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAG...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGCTTTCAGCGCGGTGTaGACCGGGAAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWAFSAV*TGKPMA
Trigger: GGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGC...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACGCTTTCAGCGCGGTGTaGACCGGGAAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHAFSAV*TGKPMA
Trigger: GGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGC...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGGCTTTCAGCGCGGTGTaGACCGGGAAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRAFSAV*TGKPMA
Trigger: GGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGC...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGATGGCTCTGGCCAGCTaGTCCAGCGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKAMALAS*SSVLWW
Trigger: CCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCAT...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp AGGTGCACTGCTTTGGCAGGAAGCCGTACCCTACACCCCTGCAGCTCCATGCCGAGTACTCACGCGGTGTaGACCGGGAAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RCTALAGSRTLHPCSSMPSTHAV*TGKPMA
Trigger: GGCCATGGGCTTCCCGGTGCACACCGCGTGAGTACT...CGGCATGGAGCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp GGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGTCACCCAGCCCTCGCTaGCTTCGTCCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: GWWTMGPQMGVTKAKAGGSPSPR*LRPAAW
Trigger: CCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGA...CCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTCACCCAGCCCTCGCTaGCTTCGTCCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRSPSPR*LRPAAW
Trigger: CCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGA...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTCACCCAGCCCTCGCTaGCTTCGTCCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGSPSPR*LRPAAW
Trigger: CCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGA...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGTGGGCTGGTGGACGATaGGTCCACAGATGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGWAGGR*VHRWEL
Trigger: TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCTGTGCTCCCCGCAGCTaGGCTGGTGGACGATGGGTC +
Preference number: 4 (lower is better)
Translates to: RSPRGSGSSPVGSPTPIFCAPRS*AGGRWV
Trigger: GACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACA...GAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR TCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGGGCTGCTGCGGCTCTTaGGCTTGTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKAGCCGS*ACWRPW
Trigger: CCAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCC...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGCGGGGCTGCCACTaGCGAAGAAGCCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TPVSCGQVLTICTMLAVHLRGCH*RRSRGS
Trigger: GCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAG...GTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGCTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: MANSRMTSAGLPLTKKPRLRLPR*HLFLPL
Trigger: TAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAG...CCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGATGGCTCTGGCCAGCTaGTCCAGCGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWMALAS*SSVLWW
Trigger: CCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCAT...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGGTCTCGGGAGTAGAGTaGTGCGGTCCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKAVSGVE*CGPLAA
Trigger: AGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGAC...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACCCCGCTGCATCTGCTaGTGGCTTCACCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELPRCIC*WLHHPF
Trigger: GAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGG...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGGCATTGCTGCAGCCATaGCTTCCCGAAGATCTGATC +
Preference number: 4 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGALLQP*LPEDLI
Trigger: GATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGC...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTCCACTCTCTCCCCGTaGCGAACCACCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGSTLSP*RTTSTL
Trigger: GAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGA...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCGCTGCGTTCGCCCCGTaGGTCAGGGTCTTCACCGGT +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVAAFAP*VRVFTG
Trigger: ACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGC...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGCCGCAGCTGGGCTGGTaGACGATGGGTCCACAGATG +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWPQLGW*TMGPQM
Trigger: CATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGG...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp GAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCGGCCGCAGCAGGGTCTaGCACCAGCCTTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: EPVSSSLQRLVQAFHLLVGRSRV*HQPYWL
Trigger: CAGCCAGTAAGGCTGGTGCCAGACCCTGCTGCGGCC...GACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
3UTR CAA 72 bp GCTGCCAACGCTTTCAGCCCTGCAAGGTGCACTGCTTaGGCAGGAAGCCGTACCCTACACCCCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AANAFSPARCTA*AGSRTLHPCSS
Trigger: GGAGCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp GCACTGCTTTGGCAGGAAGCCGTACCCTACACCCCTGCAGCTCCATGCCGGGGGGAAGGGTCATTGCAATaGTCATGCAGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ALLWQEAVPYTPAAPCRGEGSLQ*SCSQAK
Trigger: CTTGGCCTGGCTGCATGATCATTGCAATGACCCTTC...CCCCCGGCATGGAGCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAGCAGTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCTGCGGGGCTGCCACTaGCGAAGAAGCCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHLRGCH*RRSRGS
Trigger: GCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAG...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GGATGGGGTCGTCTAGGGAAGGGTCATTGCAATGATCATGCAGCCAGGCCAAGGCTGCGGGGCTGCCACTaGCGAAGAAGCCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GWGRLGKGHCNDHAARPRLRGCH*RRSRGS
Trigger: GCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAG...CCTTGGCCTGGCTGCATGATCATTGCAATGACCCTTCCCTAGACGACCCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCTGGCGAATTCCCGGATaGCGTCTGCGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTWRIPG*RLRGCH
Trigger: GTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCA...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp CAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTGGCGAATTCCCGGATaGCGTCTGCGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QVLTICTMLAVHLSMYSWWRIPG*RLRGCH
Trigger: GTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCA...CCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGCAGCCCGTCCGCTGTaGGATCCCAATCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRAARPL*DPNHPA
Trigger: GGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGC...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp TCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGGCAGCCCGTCCGCTGTaGGATCCCAATCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SCGQVLTICTMLAVHLSMAARPL*DPNHPA
Trigger: GGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGC...CATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGGCCTTCCCGAAGATCTaGTCCACTCTCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRAFPKI*STLSPW
Trigger: CCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGC...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGGCCTTCCCGAAGATCTaGTCCACTCTCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGAFPKI*STLSPW
Trigger: CCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGC...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTAAGCTCTCGGCCGGCATaGGGGCGGACAGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: GVDDLHHARRAPVHVLLVSSRPA*GRTGET
Trigger: CGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCT...TACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACGCGGGCCTGGAAGGATaGGAAGGAGAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHAGLEG*EGEAAA
Trigger: GGCAGCAGCCTCTCCTTCTCATCCTTCCAGGCCCGC...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGCTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWLRLPR*HLFLPL
Trigger: TAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAG...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACATGGCTCTGGCCAGCTaGTCCAGCGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TPVSCGQVLTICTMLAVHMALAS*SSVLWW
Trigger: CCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCAT...GTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCTCGGGAGTAGAGTGCTaGGGTCCACTGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSPRGSGSSPVGSPTPIFSGVEC*GPLAAV
Trigger: CACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGA...GAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGCTGGCTTCGTCCTGCTaGGTGGGGTCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKALASSC*VGSTKM
Trigger: CATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAG...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACATGAGTTTGGCCGTCTaGACACAGCGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHMSLAV*TQRRAG
Trigger: CCCAGCCCTCCGCTGTGTGCAGACGGCCAAACTCAT...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGGACACTCGGTGTACATaGTGCAGGGCGGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKADTRCT*CRAASS
Trigger: TGAGGATGCCGCCCTGCAGCATGTACACCGAGTGTC...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGGCTTGTTGGAGACCTTaGCGTAGAGCTGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: MANSRMTSAGLPLTKKPRACWRP*RRAASP
Trigger: GGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGC...CCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CCA 90 bp GGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GACLQLSSAPRTGIPPSGPSSSP*LPTLSA
Trigger: CGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...ACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635108.1
CDS-3UTR CCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAGGCTCATGAGGGTTaGGGTGGTTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELQAHEG*GGFASF
Trigger: GAAGCTGGCAAAACCACCCCAACCCTCATGAGCCTG...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGCTGCGTTCGCCCCGTaGGTCAGGGTCTTCACCGGT +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTAAFAP*VRVFTG
Trigger: ACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGC...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGGGGCCCTGGGCGAGTaGGCCGTGGGGGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLGALGE*AVGVSA
Trigger: TGCAGAGACCCCCACGGCCCACTCGCCCAGGGCCCC...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR TCA 90 bp CTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCTTCATGGCGAATTCCCGGATaGCGTCTGCGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LSPALFSASYRHSTFWSSWRIPG*RLRGCH
Trigger: GTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCA...TGAAGACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCTTCCTCCCCGTGGCTaGCAACGCTTTCAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRLPPRG*QRFQRG
Trigger: ACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp AGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAA +
Preference number: 4 (lower is better)
Translates to: RSLSPALFSASYRHSTFWFPDDV*GAATDE
Trigger: TTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAA...CCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR GCA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTTCGGGAGTAGAGTGCTaGGGTCCACTGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPSGVEC*GPLAAV
Trigger: CACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGA...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTCGCTGGCTTCGTCCTaGTGCGTGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVSLASS*CVGSTK
Trigger: CTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGA...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGCCCCGCTGCATCTGCTaGTGGCTTCACCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWPRCIC*WLHHPF
Trigger: GAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGG...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCCCCCGCTGCATCTGCTaGTGGCTTCACCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: LQLNAAFAPWVRVFTGGFPRCIC*WLHHPF
Trigger: GAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGG...GAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTCAGGAGTGGAGCATTaGTGCAGCCATGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGSGVEH*CSHAFP
Trigger: CGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGA...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAATCAGGAGTGGAGCATTaGTGCAGCCATGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: CAPRSWAGGRWVHRWELQSGVEH*CSHAFP
Trigger: CGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGA...TTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCAGGAGTGGAGCATTaGTGCAGCCATGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: PVSCGQVLTICTMLAVHLSGVEH*CSHAFP
Trigger: CGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGA...CAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTACGAGCAGTGGCCGCGTaGAGGAGTCCAGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GVDDLHHARRAPVHVLLVRAVAA*RSPEWS
Trigger: GCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCG...TACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGGCATCTCCCAGCCTCTaGACATGGTTTCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKAASPSL*TWFLPL
Trigger: GAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGC...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTACTCGGTGTACATGCTaGAGGGCGGCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPTRCTC*RAASSP
Trigger: GGGTGAGGATGCCGCCCTGCAGCATGTACACCGAGT...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp CAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCGACACTCGGTGTACATaGTGCAGGGCGGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: QLNAAFAPWVRVFTGGFTDTRCT*CRAASS
Trigger: TGAGGATGCCGCCCTGCAGCATGTACACCGAGTGTC...GGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp GACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTGATGGAGGAGTGTTCAGCCCTGCAAGGTaGACTGCTTTGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DVCGAATDEEAEVADGGVFSPAR*TALAGS
Trigger: GCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAA...CACTCCTCCATCAGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp TGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAGCTTGTTGGAGACCTTaGCGTAGAGCTGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CAPRSWAGGRWVHRWELQACWRP*RRAASP
Trigger: GGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGC...TTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGGCTTGTTGGAGACCTTaGCGTAGAGCTGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRACWRP*RRAASP
Trigger: GGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGC...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QVLTICTMLAVHLSMYSWPSSSP*LPTLSA
Trigger: CGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...CCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp AGGAGCCCAGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACATACTCCTGGGGGATaGGGTCGTCTAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RSPGACLQLSSAPRTGIPHTPGG*GRLGKG
Trigger: ACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATG...TGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTGGGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACTCCACTCTCTCCCCGTaGCGAACCACCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHSTLSP*RTTSTL
Trigger: GAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGA...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACGTCCCCTGCAATTCTaGACTGGAAAATGCCACACG +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELRPLQF*TGKCHT
Trigger: CGTGTGGCATTTTCCAGTCCAGAATTGCAGGGGACG...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCTGGGCGAGTGGGCCGTaGGGGTCTCTGCAGTTAACC +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTWASGP*GSLQLT
Trigger: GGTTAACTGCAGAGACCCCCACGGCCCACTCGCCCA...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp TCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTACCAGCCTTACTGGCTaGGCCCCGGGGTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SRVGRPHELCSLHTGACSTSLTG*APGSLG
Trigger: GCCCAGAGACCCCGGGGCCCAGCCAGTAAGGCTGGT...AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGCCTTCCCGAAGATCTaGTCCACTCTCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHAFPKI*STLSPW
Trigger: CCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGC...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGATGGCTCTCAGTTGCCTaGGATCCAGTTCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRWLSVA*DPVPPV
Trigger: AACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCA...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTGCTTTCAGCGCGGTGTaGACCGGGAAGCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SRVGRPHELCSLHTGACSAFSAV*TGKPMA
Trigger: GGCCATGGGCTTCCCGGTGCACACCGCGCTGAAAGC...AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635108.1
CDS-3UTR GCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACTTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAA +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHFPDDV*GAATDE
Trigger: TTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAA...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACTCGGGAGTAGAGTGCTaGGGTCCACTGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHSGVEC*GPLAAV
Trigger: CACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGA...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTCGGGAGTAGAGTaGTGCGGTCCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRVSGVE*CGPLAA
Trigger: AGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGAC...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGTCGCTGGCTTCGTCCTaGTGCGTGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRSLASS*CVGSTK
Trigger: CTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGA...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCGGAGTGGAGCATTGCTaGAGCCATGCCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVGVEHC*SHAFPK
Trigger: CTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCC...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAGTTCCTCCAGTTAAATaGTGCGTTCGCCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: CAPRSWAGGRWVHRWELQVPPVK*CVRPVG
Trigger: ACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC...TTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCGTTCCTCCAGTTAAATaGTGCGTTCGCCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: LQLNAAFAPWVRVFTGGFVPPVK*CVRPVG
Trigger: ACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC...GAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGACCGTGGCTCTCAGTTaGCTGAGATCCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRTVALS*LRSSSS
Trigger: GGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGT...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTAAGCGGGAAACGGAAGTaGCTGCTAAGAGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELSGKRK*LLREML
Trigger: AAGCATCTCTCTTAGCAGGCACTTCCGTTTCCCGCT...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CCA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGACTTCGTCCTGCTGCGTaGGGTCCACAAAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRLRPAA*GPQRCS
Trigger: ACTACATCTTTGTGGACCCCACGCAGCAGGACGAAG...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTAACTCCTTGCCGTTTGTaGAAGAAATTCCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELTPCRL*KKFPAA
Trigger: TGCAGCGGGGAATTTCTTCCACAAACGGCAAGGAGT...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGCAGGCTCATGAGGGTTaGGGTGGTTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGQAHEG*GGFASF
Trigger: GAAGCTGGCAAAACCACCCCAACCCTCATGAGCCTG...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTATGCAGGAGTCCAGAGTaGAGCCGTGACTCACAATTA +
Preference number: 4 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELCRSPE*SRDSQL
Trigger: TAATTGTGAGTCACGGCTCCACTCTGGACTCCTGCA...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTCGGCAGCCCGAGCAGTaGCCGCGTGCAGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNARQPEQ*PRAGVQ
Trigger: CTGGACTCCTGCACGCGGCCACTGCTCGGGCTGCCG...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp CATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGGCTGCGTTCGCCCCGTaGGTCAGGGTCTTCACCGGT +
Preference number: 4 (lower is better)
Translates to: HHRGSQLPEIQFLQLNAAAAFAP*VRVFTG
Trigger: ACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGC...CGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CCA 90 bp TCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCTTCACACGTCATACTCCTGGGGGATaGGGTCGTCAGGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSSLQRLVQAFHLLVFTRHTPGG*GRQAKA
Trigger: GGCCTTGGCCTGACGACCCCATCCCCCAGGAGTATG...ACGTGTGAAGACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635108.1
CDS-3UTR CCA 90 bp CACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HVWEDLMSSVLCTLALALPSSSP*LPTLSA
Trigger: GGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp GACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTGATGGAGGAGTGGCCTGCACACAGAAATaGGGAGATAAAGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DVCGAATDEEAEVADGGVACTQK*GDKARG
Trigger: CCCTCTTGCTTTATCTCCTCATTTCTGTGTGCAGGC...CACTCCTCCATCAGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635108.1
CDS-3UTR TCA 90 bp GCGAAGGTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGTCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AKVMANSRMTSAGLPLTKSLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...CTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGATGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRCGKTS*ALFFAH
Trigger: GTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACA...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: MANSRMTSAGLPLTKKPRCGKTS*ALFFAH
Trigger: GTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACA...CCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp TCCGTGGCGAAGGTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGTCTGGTCTTCACACGTaGAGAAGTCACAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVAKVMANSRMTSAGLPLSGLHT*RSHRVS
Trigger: TGACACTCTGTGACTTCTTCACGTGTGAAGACCAGA...CAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp GGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATGGCGAATTCCCGGATaGCGTCTGCGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GPQMGVTKAKAGGKYSGIWRIPG*RLRGCH
Trigger: GTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCA...TATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GTCACAGAGTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGTGGCGAATTCCCGGATaGCGTCTGCGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VTECHVWEDLMSSVLCTLWRIPG*RLRGCH
Trigger: GTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCA...CAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGGTCTGTGGCTAGACTaGAGGTGTACATCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWGLWLD*RCTSCA
Trigger: AGCACAGGATGTACACCTTCAGTCTAGCCACAGACC...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGGGTCTGTGGCTAGACTaGAGGTGTACATCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGGLWLD*RCTSCA
Trigger: AGCACAGGATGTACACCTTCAGTCTAGCCACAGACC...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGTGGCTCTCAGTTGCCTaGGATCCAGTTCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWWLSVA*DPVPPV
Trigger: AACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCA...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR TCA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGATCTGCCTCTCCACTCTaGGGTTATGACAACATCACC +
Preference number: 4 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRSASPL*GYDNIT
Trigger: GGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGA...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACCTTCTGGTCTTCACTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: LSPALFSASYRHSTFWSSLRLPR*HLFLPL
Trigger: TAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAG...TGAAGACCAGAAGGTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR GCA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCCTTCCTCCCCGTGGCTaGCAACGCTTTCAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPLPPRG*QRFQRG
Trigger: ACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAG...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAACTCCTTCCTCCCCGTGGCTaGCAACGCTTTCAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: DLMSSVLCTLALALSPELLPPRG*QRFQRG
Trigger: ACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAG...GAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635108.1
CDS-3UTR GCA 90 bp GGAGCCCAGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAQEPVSSSLQRLVQAFHMSSVL*TLALAL
Trigger: GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCAT...GTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTGGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR GCA 90 bp CACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAA +
Preference number: 4 (lower is better)
Translates to: HVWEDLMSSVLCTLALALFPDDV*GAATDE
Trigger: TTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAA...GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR GCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCCTGGCTTCGTCCTGCTaGGTGGGGTCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTLASSC*VGSTKM
Trigger: CATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAG...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCAGCACGCTCTTCCTTaGAACGGTAGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRQHALP*NGSLQG
Trigger: GCCTTGCAGGCTACCGTTGCAAGGAAGAGCGTGCTG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAGGAGTGGAGCATTGCTaGAGCCATGCCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LVDDGSTDGSYKGESRREGVEHC*SHAFPK
Trigger: CTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCC...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACGGAGTGGAGCATTGCTaGAGCCATGCCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHGVEHC*SHAFPK
Trigger: CTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCC...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGTCCGTCTTGGCAGACTaGAGGGGAAATTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWSVLAD*RGNSGL
Trigger: CAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGA...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTCCGTCTTGGCAGACTaGAGGGGAAATTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRSVLAD*RGNSGL
Trigger: CAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGA...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCAGGTGTTGACGATTTaGACCATGCTCGCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPQVLTI*TMLAVH
Trigger: GTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCCCTCCAGTTAAATGCTaGGTTCGCCCCGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTPPVKC*VRPVGQ
Trigger: CTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGCCTCCAGTTAAATGCTaGGTTCGCCCCGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QVLTICTMLAVHLSMYSWPPVKC*VRPVGQ
Trigger: CTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG...CCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGAGGGCTCAGGCTGGATaGCTGCTAGCCATAATCAGT +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRRAQAG*LLAIIS
Trigger: ACTGATTATGGCTAGCAGGCATCCAGCCTGAGCCCT...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp TCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGATGAGTTTGGCCGTCTaGACACAGCGGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCGQVLTICTMLAVHLSMMSLAV*TQRRAL
Trigger: CAGAGCCCTCCGCTGTGTGCAGACGGCCAAACTCAT...CATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATCTTCCAGGATGGCTCTaGCTCAAGGCAGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHLPGWL*LKAGSW
Trigger: CCATGAGCCTGCCTTGAGGCAGAGCCATCCTGGAAG...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGATGAGAAGGAGAGGCTaGTGCCCTGGCACTTTCGTA +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWMRRRG*CPGTFV
Trigger: TACGAAAGTGCCAGGGCAGCAGCCTCTCCTTCTCAT...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR GCA 90 bp AAGGTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCAACGCTTTCAGCCCTaGAAGGTGCACTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KVMANSRMTSAGLPLTKKQRFQP*KVHCFG
Trigger: GCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTTG...CTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCATACTCCTGGGGGATaGGGTCGTCTAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRHTPGG*GRLGKG
Trigger: ACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGSDAAV*CKASRS
Trigger: GCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGA...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTAGCTCTCGGCCGGCATTTCTGGGGTTTGTACTaGAATAGGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HHARRAPVHVLLVALGRHFWGLY*NRALRV
Trigger: GACCCTGAGAGCCCTATTCCAGTACAAACCCCAGAA...ATGCCGGCCGAGAGCTACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGCTTCGTCCTGCTGCGTaGGGTCCACAAAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGLRPAA*GPQRCS
Trigger: ACTACATCTTTGTGGACCCCACGCAGCAGGACGAAG...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCTCACCCAGCCCTCGCTaGCTTCGTCCTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLSPSPR*LRPAAW
Trigger: CCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGA...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTAGCTCTCGGCCGGCATATTTCCCATCAGGAGTaGAGCATTGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: HHARRAPVHVLLVALGRHISHQE*SIAAAM
Trigger: CATGGCTGCAGCAATGCTCCACTCCTGATGGGAAAT...ATGCCGGCCGAGAGCTACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGCGATGGGTCCACAGATaGGAGTTACAAAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKARWVHR*ELQRRK
Trigger: CTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCG...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGACGATGGGTCCACAGATaGGAGTTACAAAGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRRWVHR*ELQRRK
Trigger: CTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCG...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWCGKTS*ALFFAH
Trigger: GTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACA...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp TTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAGCAGCCCGTCCGCTGTaGGATCCCAATCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: FLHRSTCPGKGSFSRVGQAARPL*DPNHPA
Trigger: GGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGC...TTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCGACTCACAATTAGGATaGCACCCGTGTCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVDSQLG*HPCPVD
Trigger: GTCCACAGGACACGGGTGTCATCCTAATTGTGAGTC...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGTCCAGAGTGGAGCCGTaGCTCACAATTAGGATGACA +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWSRVEP*LTIRMT
Trigger: TGTCATCCTAATTGTGAGTCACGGCTCCACTCTGGA...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ACTTTCGTAGGGATTAGGAAGGCTCAGCTGCAGTTAGCTGGGGAAGGAGAACGTCTTCCTCCCCGTGGCTaGCAACGCTTTCAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: TFVGIRKAQLQLAGEGERLPPRG*QRFQRG
Trigger: ACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAG...ACGTTCTCCTTCCCCAGCTAACTGCAGCTGAGCCTTCCTAATCCCTACGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR GCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGCTAGGGAAGGGTCATTaGAATGATCATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWLGKGH*NDHAAR
Trigger: CCTGGCTGCATGATCATTGCAATGACCCTTCCCTAG...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPEDAAVW*KASRSS
Trigger: ACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATC...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGGGGGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AQGRDLSHELGKIPTFPGDAAVW*KASRSS
Trigger: ACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATC...CCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAGGTGTACATCCTGTaGTTCACCCACGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GWWTMGPQMGVTKAKAGGKVYIL*FTHVSD
Trigger: GTCTGACACGTGGGTGAAGCACAGGATGTACACCTT...CCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACAAGGTGTACATCCTGTaGTTCACCCACGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHKVYIL*FTHVSD
Trigger: GTCTGACACGTGGGTGAAGCACAGGATGTACACCTT...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCATTCCCCGCTGCATCTaGTGCTGGCTTCACCATCCT +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTIPRCI*CWLHHP
Trigger: AGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAAT...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGAAGAAATTCCCCGCTaGATCTGCTGCTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPEEEIPR*ICCWLH
Trigger: GTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTC...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTGAAGAAATTCCCCGCTaGATCTGCTGCTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPEEIPR*ICCWLH
Trigger: GTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTC...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCGCATTGCTGCAGCCATaGCTTCCCGAAGATCTGATC +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVALLQP*LPEDLI
Trigger: GATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGC...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTTGCACCATGCTCGCCGTaGACCTGTCCATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RGSGSSPVGSPTPIFLPLAPCSP*TCPCTP
Trigger: AGGAGTACATGGACAGGTGCACGGCGAGCATGGTGC...AAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGTTCCTCCAGTTAAATaGTGCGTTCGCCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTVPPVK*CVRPVG
Trigger: ACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGCTTCACAGAAGCACATaGCCAGGGAAGGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGLHRST*PGKGSV
Trigger: TACAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAG...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398367.1
CDS-3UTR CCA 90 bp GGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GWWTMGPQMGVTKAKAGGTECHV*EDLMSS
Trigger: AGAGCTCATGAGGTCTTCCCACACGTGACACTCTGT...CCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp AGGAGCCCAGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCAACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSPGACLQLSSAPRTGIPTECHV*EDLMSS
Trigger: AGAGCTCATGAGGTCTTCCCACACGTGACACTCTGT...TGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTGGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CCA 90 bp GAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: EFPDDVCGAATDEEAEVATECHV*EDLMSS
Trigger: AGAGCTCATGAGGTCTTCCCACACGTGACACTCTGT...AGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CCA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAGGCATTCCACCTTCTaGTCTTCACACGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRRHSTF*SSHVKK
Trigger: CTTCTTCACGTGTGAAGACCAGAAGGTGGAATGCCT...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp GACGTCTGCGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTGATGGAGGAGTGAGGCATTCCACCTTCTaGTCTTCACACGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DVCGAATDEEAEVADGGVRHSTF*SSHVKK
Trigger: CTTCTTCACGTGTGAAGACCAGAAGGTGGAATGCCT...CACTCCTCCATCAGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGAGAGAGATGCTTCCGTaGCGAAGGTCATGGCGAATT +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRREMLP*RRSWRI
Trigger: AATTCGCCATGACCTTCGCCACGGAAGCATCTCTCT...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGACGTGTCAGACTCACTaGCTCGATCCGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKATCQTH*LDPCSF
Trigger: AAAACTACACGGATCGAGCCAGTGAGTCTGACACGT...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGACTCCTTGCCGTTTGTaGAAGAAATTCCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGTPCRL*KKFPAA
Trigger: TGCAGCGGGGAATTTCTTCCACAAACGGCAAGGAGT...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGCCCACGACTCCGTCTTaGCAGACTGCAGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: QVLTICTMLAVHLSMYSWPTTPS*QTAGEI
Trigger: AATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGG...CCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGACACCCGTGTCCTGTaGACAGGTGTTGACGATTTG +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPEDTRVL*TGVDDL
Trigger: CAAATCGTCAACACCTGTCCACAGGACACGGGTGTC...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CAA 72 bp GATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTaGCACCATGCTCGCCGTGCACCTGTCCATGTACTC +
Preference number: 4 (lower is better)
Translates to: DDTRVLWTGVDD*HHARRAPVHVL
Trigger: GAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGAAGGGTCATTGCAATaGTCATGCAGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTEGSLQ*SCSQAK
Trigger: CTTGGCCTGGCTGCATGATCATTGCAATGACCCTTC...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACGAAGGGTCATTGCAATaGTCATGCAGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHEGSLQ*SCSQAK
Trigger: CTTGGCCTGGCTGCATGATCATTGCAATGACCCTTC...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVSLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTAGGGAAGGGTCATTaGAATGATCATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPLGKGH*NDHAAR
Trigger: CCTGGCTGCATGATCATTGCAATGACCCTTCCCTAG...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGGGGCTAGGGAAGGGTCATTaGAATGATCATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQGRDLSHELGKIPTFPGLGKGH*NDHAAR
Trigger: CCTGGCTGCATGATCATTGCAATGACCCTTCCCTAG...CCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ACTTTCGTAGGGATTAGGAAGGCTCAGCTGCAGTTAGCTGGGGAAGGAGAACGTGTCTCGGGAGTAGAGTaGTGCGGTCCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TFVGIRKAQLQLAGEGERVSGVE*CGPLAA
Trigger: AGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGAC...ACGTTCTCCTTCCCCAGCTAACTGCAGCTGAGCCTTCCTAATCCCTACGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR GCA 90 bp CATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGCTGGCTTCGTCCTGCTaGGTGGGGTCCACAAAGATG +
Preference number: 4 (lower is better)
Translates to: HHRGSQLPEIQFLQLNAALASSC*VGSTKM
Trigger: CATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAG...CGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR GCA 90 bp GCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCAGCACGCTCTTCCTTaGAACGGTAGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: AHAQGRDLSHELGKIPTFQHALP*NGSLQG
Trigger: GCCTTGCAGGCTACCGTTGCAAGGAAGAGCGTGCTG...GAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGCATTGCTGCAGCCATaGCTTCCCGAAGATCTGATC +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTALLQP*LPEDLI
Trigger: GATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGC...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGGCATTGCTGCAGCCATaGCTTCCCGAAGATCTGATC +
Preference number: 4 (lower is better)
Translates to: SCGQVLTICTMLAVHLSMALLQP*LPEDLI
Trigger: GATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGC...CATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGTCCGTCTTGGCAGACTaGAGGGGAAATTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRSVLAD*RGNSGL
Trigger: CAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGA...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCGCACCATGCTCGCCGTaGACCTGTCCATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AHAQGRDLSHELGKIPTFAPCSP*TCPCTP
Trigger: AGGAGTACATGGACAGGTGCACGGCGAGCATGGTGC...GAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCAGAAGGAGAGGCTGCTaGCCTGGCACTTTCGTAGGG +
Preference number: 4 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPRRRGC*PGTFVG
Trigger: CCCTACGAAAGTGCCAGGGCAGCAGCCTCTCCTTCT...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR CCA 90 bp GGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAGCTTGTTGGAGACCTTaGCGTAGAGCTGCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRPHELCSLHTGACSLSRACWRP*RRAASP
Trigger: GGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGC...TCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAPSSSP*LPTLSA
Trigger: CGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPETECHV*EDLMSS
Trigger: AGAGCTCATGAGGTCTTCCCACACGTGACACTCTGT...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGAGGCATTCCACCTTCTaGTCTTCACACGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRRHSTF*SSHVKK
Trigger: CTTCTTCACGTGTGAAGACCAGAAGGTGGAATGCCT...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGAGCTCATCCACGTTCTaGGGTTTGTACTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGSSSTF*GLYWNR
Trigger: CCTATTCCAGTACAAACCCCAGAACGTGGATGAGCT...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCAGCTCATCCACGTTCTaGGGTTTGTACTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: RSPRGSGSSPVGSPTPIFSSSTF*GLYWNR
Trigger: CCTATTCCAGTACAAACCCCAGAACGTGGATGAGCT...GAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGACGTGTCAGACTCACTaGCTCGATCCGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGTCQTH*LDPCSF
Trigger: AAAACTACACGGATCGAGCCAGTGAGTCTGACACGT...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCACCATCCTTTCTaGAGTTCAGGTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: RSPRGSGSSPVGSPTPIFLHHPF*SSGLWL
Trigger: TAGCCACAGACCTGAACTCCAGAAAGGATGGTGAAG...GAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCTTCACCATCCTTTCTaGAGTTCAGGTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PPVKCCVRPVGQGLHRWVLHHPF*SSGLWL
Trigger: TAGCCACAGACCTGAACTCCAGAAAGGATGGTGAAG...AACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCTCCACTCTCTCCCCGTaGCGAACCACCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: IFFTEAHAQGRDLSHELGSTLSP*RTTSTL
Trigger: GAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGA...GCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATCGTCCCCTGCAATTCTaGACTGGAAAATGCCACACG +
Preference number: 4 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHRPLQF*TGKCHT
Trigger: CGTGTGGCATTTTCCAGTCCAGAATTGCAGGGGACG...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR CCA 90 bp AGGATGAGAAGGAGAGGCTGCTGCCCTGGCACTTTCGTAGGGATTAGGAAGGCTCAGGCTCATGAGGGTTaGGGTGGTTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RMRRRGCCPGTFVGIRKAQAHEG*GGFASF
Trigger: GAAGCTGGCAAAACCACCCCAACCCTCATGAGCCTG...AGCCTTCCTAATCCCTACGAAAGTGCCAGGGCAGCAGCCTCTCCTTCTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR CCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGACACCCGTGTCCTGTaGACAGGTGTTGACGATTTG +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRDTRVL*TGVDDL
Trigger: CAAATCGTCAACACCTGTCCACAGGACACGGGTGTC...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGGGGTGCAGGAGTCCAGAGTaGAGCCGTGACTCACAATTA +
Preference number: 4 (lower is better)
Translates to: AQGRDLSHELGKIPTFPGCRSPE*SRDSQL
Trigger: TAATTGTGAGTCACGGCTCCACTCTGGACTCCTGCA...CCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCAGACTAAGACGCCTCTaGAAACAGCAGCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVRLRRL*KQQHLP
Trigger: TGGGAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCT...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
3UTR CAA 72 bp ACAATTAGGATGACACCCGTGTCCTGTGGACAGGTGTaGACGATTTGCACCATGCTCGCCGTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: TIRMTPVSCGQV*TICTMLAVHLS
Trigger: GGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGCCTGCACACAGAAATaGGGAGATAAAGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHACTQK*GDKARG
Trigger: CCCTCTTGCTTTATCTCCTCATTTCTGTGTGCAGGC...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR TCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGGCTGCTGCGGCTCTTaGGCTTGTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAGCCGS*ACWRPW
Trigger: CCAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCC...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR TCA 90 bp AACGCTTTCAGCCCTGCAAGGTGCACTGCTTTGGCAGGAAGCCGTACCCTACACTCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NAFSPARCTALAGSRTLHSLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...GTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp AACGCTTTCAGCCCTGCAAGGTGCACTGCTTTGGCAGGAAGCCGTACCCTACACTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: NAFSPARCTALAGSRTLHCGKTS*ALFFAH
Trigger: GTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACA...GTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGGCTGAAAGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR TCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTCTGGTCTTCACACGTaGAGAAGTCACAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVSGLHT*RSHRVS
Trigger: TGACACTCTGTGACTTCTTCACGTGTGAAGACCAGA...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp AAGGTCATGGCGAATTCCCGGATGACGTCTGCGGGGCTGCCACTGACGAAGAAGTCTGGTCTTCACACGTaGAGAAGTCACAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KVMANSRMTSAGLPLTKKSGLHT*RSHRVS
Trigger: TGACACTCTGTGACTTCTTCACGTGTGAAGACCAGA...CTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp TGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAACTCTTGAAGTTTTTCCACTGCGGGGCTGCCACTaGCGAAGAAGCCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CSLHTGACSLSRTLEVFPLRGCH*RRSRGS
Trigger: GCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAG...TGGAAAAACTTCAAGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGCGTTTTCAAAGTCTTTaGTCCCACGACTCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPERFQSL*SHDSVL
Trigger: CAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACG...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCTCCACTCTGAGGTTATaGCAACATCACCGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTSTLRL*QHHRGS
Trigger: AGAGCCACGGTGATGTTGTCATAACCTCAGAGTGGA...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR TCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGTCTGCCTCTCCACTCTaGGGTTATGACAACATCACC +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRSASPL*GYDNIT
Trigger: GGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGA...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR TCA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATTCTGCCTCTCCACTCTaGGGTTATGACAACATCACC +
Preference number: 4 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHSASPL*GYDNIT
Trigger: GGTGATGTTGTCATAACCTCAGAGTGGAGAGGCAGA...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRMSSVL*TLALAL
Trigger: GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCAT...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VLWTGVDDLHHARRAPVHMSSVL*TLALAL
Trigger: GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCAT...ATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCTTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAA +
Preference number: 4 (lower is better)
Translates to: FTEAHAQGRDLSHELGKIFPDDV*GAATDE
Trigger: TTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAA...GATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCTGGACTGGAAAATaGCACACGATGATAATGGGG +
Preference number: 4 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGFWTGK*HTMIMG
Trigger: CCCCATTATCATCGTGTGGCATTTTCCAGTCCAGAA...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCTTCTGGACTGGAAAATaGCACACGATGATAATGGGG +
Preference number: 4 (lower is better)
Translates to: QLNAAFAPWVRVFTGGFTFWTGK*HTMIMG
Trigger: CCCCATTATCATCGTGTGGCATTTTCCAGTCCAGAA...GGTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTATGAGTTTGGCCGTCTaGACACAGCGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAMSLAV*TQRRAG
Trigger: CCCAGCCCTCCGCTGTGTGCAGACGGCCAAACTCAT...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398367.1
CDS-3UTR GCA 90 bp CAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGCTTCACAGAAGCACATaGCCAGGGAAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: QVLTICTMLAVHLSMYSWLHRST*PGKGSF
Trigger: GAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAG...CCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GTCACAGAGTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGCCCTGCAAGGTGCACTaGTTTGGCAGGAAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: VTECHVWEDLMSSVLCTLPCKVH*FGRKPY
Trigger: GTACGGCTTCCTGCCAAAGCAGTGCACCTTGCAGGG...CAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CCA 90 bp TCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGAGAGAGATGCTTCCGTaGCGAAGGTCATGGCGAATT +
Preference number: 4 (lower is better)
Translates to: SCGQVLTICTMLAVHLSMREMLP*RRSWRI
Trigger: AATTCGCCATGACCTTCGCCACGGAAGCATCTCTCT...CATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACAGAGAGATGCTTCCGTaGCGAAGGTCATGGCGAATT +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHREMLP*RRSWRI
Trigger: AATTCGCCATGACCTTCGCCACGGAAGCATCTCTCT...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GGAAGGATGAGAAGGAGAGGCTGCTGCCCTGGCACTTTCGTAGGGATTAGGAAGTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: GRMRRRGCCPGTFVGIRKSDAAV*CKASRS
Trigger: GCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGA...CTTCCTAATCCCTACGAAAGTGCCAGGGCAGCAGCCTCTCCTTCTCATCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR CCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACTTCTGGGGTTTGTACTaGAATAGGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHFWGLY*NRALRV
Trigger: GACCCTGAGAGCCCTATTCCAGTACAAACCCCAGAA...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGATTTCCCATCAGGAGTaGAGCATTGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRISHQE*SIAAAM
Trigger: CATGGCTGCAGCAATGCTCCACTCCTGATGGGAAAT...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACATTTCCCATCAGGAGTaGAGCATTGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHISHQE*SIAAAM
Trigger: CATGGCTGCAGCAATGCTCCACTCCTGATGGGAAAT...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGCCTGCAATTCTGGACTaGAAAATGCCACACGATGAT +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWPAILD*KMPHDD
Trigger: ATCATCGTGTGGCATTTTCCAGTCCAGAATTGCAGG...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCTGTGCTCCCCGCAGCTaGGCTGGTGGACGATGGGTC +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLCAPRS*AGGRWV
Trigger: GACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACA...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCCTCAAGGCAGGCTCATaGTCAACAGGCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLLKAGS*STGRLQ
Trigger: CTGGAGCCTGCCTGTTGACCATGAGCCTGCCTTGAG...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR TCA 90 bp GGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTATCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVDDLHHARRAPVHVLLVSLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...TACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp CGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTTTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACAC +
Preference number: 4 (lower is better)
Translates to: RGSGSSPVGSPTPIFLPLCGKTS*ALFFAH
Trigger: GTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACA...AAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp AAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCTGCGGGGCTGCCACTaGCGAAGAAGCCGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KPEGNIPGYKSASRASTNLRGCH*RRSRGS
Trigger: GCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAG...ATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp AAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATGCAGCCCGTCCGCTGTaGGATCCCAATCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: KPEGNIPGYKSASRASTNAARPL*DPNHPA
Trigger: GGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGC...ATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCGTTTTCAAAGTCTTTaGTCCCACGACTCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRRFQSL*SHDSVL
Trigger: CAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTCACAGCGGAGGGCTCTaGGTGGGGCCCTGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: EIFRDIKVRLVLLQITLGHSGGL*VGPWAS
Trigger: ACTCGCCCAGGGCCCCACTCAGAGCCCTCCGCTGTG...ACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp CACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCCTAGGGAAGGGTCATTaGAATGATCATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HVWEDLMSSVLCTLALALLGKGH*NDHAAR
Trigger: CCTGGCTGCATGATCATTGCAATGACCCTTCCCTAG...GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR GCA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCGCTGCTAAGACTCCTTaGCGTTTGTGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVAAKTP*RLWKKF
Trigger: GAATTTCTTCCACAAACGGCAAGGAGTCTTAGCAGC...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGGGGGCTGCTAAGACTCCTTaGCGTTTGTGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: AQGRDLSHELGKIPTFPGAAKTP*RLWKKF
Trigger: GAATTTCTTCCACAAACGGCAAGGAGTCTTAGCAGC...CCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCAGCACGCTCTTCCTTaGAACGGTAGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: FTEAHAQGRDLSHELGKIQHALP*NGSLQG
Trigger: GCCTTGCAGGCTACCGTTGCAAGGAAGAGCGTGCTG...GATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTTTATTGGAGTGGAGCATTGCTaGAGCCATGCCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GQGLHRWVHQLPFSFLFIGVEHC*SHAFPK
Trigger: CTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCC...AATAAAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGTTCTGGACTGGAAAATaGCACACGATGATAATGGGG +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPEFWTGK*HTMIMG
Trigger: CCCCATTATCATCGTGTGGCATTTTCCAGTCCAGAA...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAACGAGCAGTGGCCGCGTaGAGGAGTCCAGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKRAVAA*RSPEWS
Trigger: GCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCG...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp AAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCGAGCAGTGGCCGCGTaGAGGAGTCCAGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KPEGNIPGYKSASRASTNRAVAA*RSPEWS
Trigger: GCTCCACTCTGGACTCCTGCACGCGGCCACTGCTCG...ATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTACTTCACAGAAGCACATaGCCAGGGAAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: GVDDLHHARRAPVHVLLVLHRST*PGKGSF
Trigger: GAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAG...TACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAACATACTCCTGGGGGATaGGGTCGTCTAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FLHRSTCPGKGSFSRVGQHTPGG*GRLGKG
Trigger: ACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATG...TTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTTACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGSGSSPVGSPTPIFLPLTECHV*EDLMSS
Trigger: AGAGCTCATGAGGTCTTCCCACACGTGACACTCTGT...AAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCAGGCATTCCACCTTCTaGTCTTCACACGTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IQFLQLNAAFAPWVRVFTRHSTF*SSHVKK
Trigger: CTTCTTCACGTGTGAAGACCAGAAGGTGGAATGCCT...GGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCTTCACCATCCTTTCTaGAGTTCAGGTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRLHHPF*SSGLWL
Trigger: TAGCCACAGACCTGAACTCCAGAAAGGATGGTGAAG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGGGGAAATTCAGGTCTaGCCTGTAGTATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRGEIQV*PVVFPI
Trigger: GATGGGAAATACTACAGGCCAGACCTGAATTTCCCC...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAGGGGAAATTCAGGTCTaGCCTGTAGTATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LVDDGSTDGSYKGESRREGEIQV*PVVFPI
Trigger: GATGGGAAATACTACAGGCCAGACCTGAATTTCCCC...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGGGGGAAATTCAGGTCTaGCCTGTAGTATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: QVLTICTMLAVHLSMYSWGEIQV*PVVFPI
Trigger: GATGGGAAATACTACAGGCCAGACCTGAATTTCCCC...CCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGCGTCCCCTGCAATTCTaGACTGGAAAATGCCACACG +
Preference number: 4 (lower is better)
Translates to: HHRGSQLPEIQFLQLNAARPLQF*TGKCHT
Trigger: CGTGTGGCATTTTCCAGTCCAGAATTGCAGGGGACG...CGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398367.1
CDS-3UTR CCA 90 bp GCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGGGGATCTTTCTCACGAGTTaGGCAAAATCCCCACATTCC +
Preference number: 4 (lower is better)
Translates to: AQGRDLSHELGKIPTFPGIFLTS*AKSPHS
Trigger: GGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGAT...CCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGCTGCGTTCGCCCCGTaGGTCAGGGTCTTCACCGGT +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKAAFAP*VRVFTG
Trigger: ACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGC...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp GGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATACCATGTCCAGGCACCTaGCTGAAAATCCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GPQMGVTKAKAGGKYSGIPCPGT*LKIQKR
Trigger: CCGCTTCTGGATTTTCAGCCAGGTGCCTGGACATGG...TATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CCA 90 bp CGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGTCCCCGCAGCTGGGCTaGTGGACGATGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: RDIKVRLVLLQITLGETKSPQLG*WTMGPQ
Trigger: CTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA...CTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CAA 72 bp GTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCTCTCTCCAGAACTCTT +
Preference number: 4 (lower is better)
Translates to: VSRVGRPHELCS*HTGACSLSRTL
Trigger: AAGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR TCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAGGCTGCTGCGGCTCTTaGGCTTGTTGGAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKGCCGS*ACWRPW
Trigger: CCAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCC...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCTCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AHAQGRDLSHELGKIPTFSLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...GAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp GGAAGGATGAGAAGGAGAGGCTGCTGCCCTGGCACTTTCGTAGGGATTAGGAAGTCTGGTCTTCACACGTaGAGAAGTCACAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: GRMRRRGCCPGTFVGIRKSGLHT*RSHRVS
Trigger: TGACACTCTGTGACTTCTTCACGTGTGAAGACCAGA...CTTCCTAATCCCTACGAAAGTGCCAGGGCAGCAGCCTCTCCTTCTCATCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR TCA 90 bp AATCATCCATTCCTAGATCAAACCTCTACATTGCCACTTTCTTGCTGTGTGACCTGGCGAATTCCCGGATaGCGTCTGCGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NHPFLDQTSTLPLSCCVTWRIPG*RLRGCH
Trigger: GTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCA...GGTCACACAGCAAGAAAGTGGCAATGTAGAGGTTTGATCTAGGAATGGATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR TCA 90 bp ATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGAAGCTCTCGGCCGGCATaGGGGCGGACAGGGGAAACG +
Preference number: 4 (lower is better)
Translates to: MENEVVRSFVCGESLIPGSSRPA*GRTGET
Trigger: CGTTTCCCCTGTCCGCCCTCATGCCGGCCGAGAGCT...TCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR TCA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGACTCACAATTAGGATaGCACCCGTGTCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLDSQLG*HPCPVD
Trigger: GTCCACAGGACACGGGTGTCATCCTAATTGTGAGTC...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTTTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAA +
Preference number: 4 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASFPDDV*GAATDE
Trigger: TTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAA...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAATCGGGAGTAGAGTGCTaGGGTCCACTGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKSGVEC*GPLAAV
Trigger: CACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGA...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAATCGCTGGCTTCGTCCTaGTGCGTGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKSLASS*CVGSTK
Trigger: CTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGA...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCTCGCTGGCTTCGTCCTaGTGCGTGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLSLASS*CVGSTK
Trigger: CTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGA...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAATTCCCCGCTGCATCTaGTGCTGGCTTCACCATCCT +
Preference number: 4 (lower is better)
Translates to: FLHRSTCPGKGSFSRVGQIPRCI*CWLHHP
Trigger: AGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAAT...TTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAATTCTGGACTGGAAAATaGCACACGATGATAATGGGG +
Preference number: 4 (lower is better)
Translates to: LVDDGSTDGSYKGESRREFWTGK*HTMIMG
Trigger: CCCCATTATCATCGTGTGGCATTTTCCAGTCCAGAA...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGGTCAATGTTGAAATTTaGCTCTTTCAGCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRVNVEI*LFQLFQ
Trigger: CTGGAAGAGCTGAAAGAGGCAAATTTCAACATTGAC...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCCTCCAGTTAAATGCTaGGTTCGCCCCGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VSCFYKSHWVRLRRLWKQPPVKC*VRPVGQ
Trigger: CTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG...CTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGTTCCTCCAGTTAAATaGTGCGTTCGCCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAVPPVK*CVRPVG
Trigger: ACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CCA 90 bp TGGGCCGTGGGGGTCTCTGCAGTTAACCATTGGTGTAACTTGCTTCTCTGGATTTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: WAVGVSAVNHWCNLLLWISDAAV*CKASRS
Trigger: GCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGA...AATCCAGAGAAGCAAGTTACACCAATGGTTAACTGCAGAGACCCCCACGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCTTCTGGGGTTTGTACTaGAATAGGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPFWGLY*NRALRV
Trigger: GACCCTGAGAGCCCTATTCCAGTACAAACCCCAGAA...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ACTTTCGTAGGGATTAGGAAGGCTCAGCTGCAGTTAGCTGGGGAAGGAGAACGTCTTCGTCCTGCTGCGTaGGGTCCACAAAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: TFVGIRKAQLQLAGEGERLRPAA*GPQRCS
Trigger: ACTACATCTTTGTGGACCCCACGCAGCAGGACGAAG...ACGTTCTCCTTCCCCAGCTAACTGCAGCTGAGCCTTCCTAATCCCTACGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR CCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTCCCACGACTCCGTCTTaGCAGACTGCAGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAPTTPS*QTAGEI
Trigger: AATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGG...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CCA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATCTTTCTCACGAGTTaGGCAAAATCCCCACATTCC +
Preference number: 4 (lower is better)
Translates to: LVDDGSTDGSYKGESRREIFLTS*AKSPHS
Trigger: GGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGAT...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATCTCTCCAGAACTCTTaGAGTTTTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GPQMGVTKAKAGGKYSGISLQNS*SFSSRG
Trigger: GCCCCTGCTGGAAAAACTTCAAGAGTTCTGGAGAGA...TATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGAATCAGTGTCAATGTTaGAATTTGCCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWNQCQC*NLPLSA
Trigger: AGCTGAAAGAGGCAAATTTCAACATTGACACTGATT...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp TGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAATAAAACCAACGAATaGGAGGATGTGGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CAPRSWAGGRWVHRWELQNKTNE*EDVVFH
Trigger: ATGGAAAACCACATCCTCTCATTCGTTGGTTTTATT...TTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp GGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATACTAGGGAAGGGTCATTaGAATGATCATGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPQMGVTKAKAGGKYSGILGKGH*NDHAAR
Trigger: CCTGGCTGCATGATCATTGCAATGACCCTTCCCTAG...TATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNADAAVW*KASRSS
Trigger: ACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATC...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR GCA 90 bp GGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGATGGCTCTGGCCAGCTaGTCCAGCGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GNIPGYKSASRASTNHIGMALAS*SSVLWW
Trigger: CCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCAT...CCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTCTCGGGAGTAGAGTaGTGCGGTCCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKVSGVE*CGPLAA
Trigger: AGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGAC...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGAAGAAATTCCCCGCTaGATCTGCTGCTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAEEIPR*ICCWLH
Trigger: GTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTC...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR GCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAATGAGTTTGGCCGTCTaGACACAGCGGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKMSLAV*TQRRAG
Trigger: CCCAGCCCTCCGCTGTGTGCAGACGGCCAAACTCAT...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR GCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGTCAATGTTGAAATTTaGCTCTTTCAGCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPEVNVEI*LFQLFQ
Trigger: CTGGAAGAGCTGAAAGAGGCAAATTTCAACATTGAC...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp AGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCGCACCATGCTCGCCGTaGACCTGTCCATGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SRREIFRDIKVRLVLLQIAPCSP*TCPCTP
Trigger: AGGAGTACATGGACAGGTGCACGGCGAGCATGGTGC...GATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCCCTCCAGTTAAATGCTaGGTTCGCCCCGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLPPVKC*VRPVGQ
Trigger: CTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp GATGTGGTTTTCCATTTGAAAAGTGAGCTCCTTGGAGCTCCTTGGTTGTTGATTCCGTCTTCCTCCCCGTaGCTGCCAACGCTTTCAGCG +
Preference number: 4 (lower is better)
Translates to: DVVFHLKSELLGAPWLLIPSSSP*LPTLSA
Trigger: CGCTGAAAGCGTTGGCAGCCACGGGGAGGAAGACGG...AATCAACAACCAAGGAGCTCCAAGGAGCTCACTTTTCAAATGGAAAACCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCACGTGTCAGACTCACTaGCTCGATCCGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPTCQTH*LDPCSF
Trigger: AAAACTACACGGATCGAGCCAGTGAGTCTGACACGT...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp CGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTTATCTTTCTCACGAGTTaGGCAAAATCCCCACATTCC +
Preference number: 4 (lower is better)
Translates to: RGSGSSPVGSPTPIFLPLIFLTS*AKSPHS
Trigger: GGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGAT...AAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCCCAGCCTCTGCACATaGTTTCTGCCTCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: VSCFYKSHWVRLRRLWKQPSLCT*FLPLHS
Trigger: AGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGG...CTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCTCACTGACCTTCCAGGATGAGTTTGGCCGTCTGCACACAGCGGAGGGCTCTTCTGCAGTTAACCATTaGTGTAACTTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSLTFQDEFGRLHTAEGSSAVNH*CNLLLW
Trigger: CCAGAGAAGCAAGTTACACCAATGGTTAACTGCAGA...AGAGCCCTCCGCTGTGTGCAGACGGCCAAACTCATCCTGGAAGGTCAGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR TCA 90 bp GGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGGCCTTCCCGAAGATCTaGTCCACTCTCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GNIPGYKSASRASTNHIGAFPKI*STLSPW
Trigger: CCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGC...CCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ACTTTCGTAGGGATTAGGAAGGCTCAGCTGCAGTTAGCTGGGGAAGGAGAACGTCGTTTTCAAAGTCTTTaGTCCCACGACTCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: TFVGIRKAQLQLAGEGERRFQSL*SHDSVL
Trigger: CAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACG...ACGTTCTCCTTCCCCAGCTAACTGCAGCTGAGCCTTCCTAATCCCTACGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR TCA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGAATCAGTGTCAATGTTaGAATTTGCCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WAGGRWVHRWELQRRKPENQCQC*NLPLSA
Trigger: AGCTGAAAGAGGCAAATTTCAACATTGACACTGATT...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTTCCACTCTGAGGTTATaGCAACATCACCGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNASTLRL*QHHRGS
Trigger: AGAGCCACGGTGATGTTGTCATAACCTCAGAGTGGA...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR TCA 90 bp GGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGTACTCCTGGTAGAAATGAAGACTCGATaGACTCAATGGTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GVDDLHHARRAPVHVLLVEMKTR*TQWSLL
Trigger: CAGAAGAGACCATTGAGTTCATCGAGTCTTCATTTC...TACCAGGAGTACATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp ATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGACTTCCTCCCCGTGGCTaGCAACGCTTTCAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: MENEVVRSFVCGESLIPGLPPRG*QRFQRG
Trigger: ACCGCGCTGAAAGCGTTGGCAGCCACGGGGAGGAAG...TCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR GCA 90 bp GTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VSCFYKSHWVRLRRLWKQDAAVW*KASRSS
Trigger: ACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATC...CTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTAAGGTGTACATCCTGTaGTTCACCCACGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAKVYIL*FTHVSD
Trigger: GTCTGACACGTGGGTGAAGCACAGGATGTACACCTT...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR GCA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAGTCAATGTTGAAATTTaGCTCTTTCAGCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVDDGSTDGSYKGESRREVNVEI*LFQLFQ
Trigger: CTGGAAGAGCTGAAAGAGGCAAATTTCAACATTGAC...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCACCGTGGCTCTCAGTTaGCTGAGATCCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLTVALS*LRSSSS
Trigger: GGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGT...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGACTCGGTGTACATGCTaGAGGGCGGCATCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GNIPGYKSASRASTNHIGTRCTC*RAASSP
Trigger: GGGTGAGGATGCCGCCCTGCAGCATGTACACCGAGT...CCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTACCATTGGTGTAACTTaGTTCTCTGGATTCCATTTT +
Preference number: 4 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPTIGVT*FSGFHF
Trigger: AAAATGGAATCCAGAGAAGCAAGTTACACCAATGGT...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTCATACTCCTGGGGGATaGGGTCGTCTAGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETHTPGG*GRLGKG
Trigger: ACCCTTCCCTAGACGACCCCATCCCCCAGGAGTATG...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNATECHV*EDLMSS
Trigger: AGAGCTCATGAGGTCTTCCCACACGTGACACTCTGT...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CCA 90 bp AGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGTCCACTCTCTCCCCGTaGCGAACCACCAGCACGCTC +
Preference number: 4 (lower is better)
Translates to: REIFRDIKVRLVLLQITLSTLSP*RTTSTL
Trigger: GAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGA...CAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAACCCACGACTCCGTCTTaGCAGACTGCAGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKPTTPS*QTAGEI
Trigger: AATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGG...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp GGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTCTTTATTTGCAGGAGTCCAGAGTaGAGCCGTGACTCACAATTA +
Preference number: 4 (lower is better)
Translates to: GQGLHRWVHQLPFSFLFICRSPE*SRDSQL
Trigger: TAATTGTGAGTCACGGCTCCACTCTGGACTCCTGCA...AATAAAGAGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTTGGGCTGGTGGACGATaGGTCCACAGATGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASWAGGR*VHRWEL
Trigger: TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTGAAGGGTCATTGCAATaGTCATGCAGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASEGSLQ*SCSQAK
Trigger: CTTGGCCTGGCTGCATGATCATTGCAATGACCCTTC...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VSCFYKSHWVRLRRLWKQMSSVL*TLALAL
Trigger: GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCAT...CTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGATTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAA +
Preference number: 4 (lower is better)
Translates to: MENEVVRSFVCGESLIPGFPDDV*GAATDE
Trigger: TTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAA...TCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR GCA 90 bp AAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATATTCCCCGCTGCATCTaGTGCTGGCTTCACCATCCT +
Preference number: 4 (lower is better)
Translates to: KPEGNIPGYKSASRASTNIPRCI*CWLHHP
Trigger: AGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAAT...ATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp AGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCGAAGAAATTCCCCGCTaGATCTGCTGCTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRREIFRDIKVRLVLLQIEEIPR*ICCWLH
Trigger: GTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTC...GATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp ATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGCAGCACGCTCTTCCTTaGAACGGTAGCCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: IFRDIKVRLVLLQITLGEQHALP*NGSLQG
Trigger: GCCTTGCAGGCTACCGTTGCAAGGAAGAGCGTGCTG...CTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTCAGGAGTGGAGCATTaGTGCAGCCATGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GNIPGYKSASRASTNHIGSGVEH*CSHAFP
Trigger: CGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGA...CCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp CGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGCAGGTGTTGACGATTTaGACCATGCTCGCCGTGCAC +
Preference number: 4 (lower is better)
Translates to: RDIKVRLVLLQITLGETKQVLTI*TMLAVH
Trigger: GTGCACGGCGAGCATGGTGCAAATCGTCAACACCTG...CTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTACCGTGGCTCTCAGTTaGCTGAGATCCAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETTVALS*LRSSSS
Trigger: GGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGT...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTGCATCTCCCAGCCTCTaGACATGGTTTCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETASPSL*TWFLPL
Trigger: GAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGC...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GTGCCCCAGCCTCCTCAGCAGACTGGAGACAAAGCTAACACTGTATCAAAGGGTCCTTTCTTTCATTCCTaGCAACTTCCTGAATCATCC +
Preference number: 4 (lower is better)
Translates to: VPQPPQQTGDKANTVSKGPFFHS*QLPESS
Trigger: GGATGATTCAGGAAGTTGGCAGGAATGAAAGAAAGG...ACCCTTTGATACAGTGTTAGCTTTGTCTCCAGTCTGCTGAGGAGGCTGGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASSDAAV*CKASRS
Trigger: GCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGA...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAACGTGTCAGACTCACTaGCTCGATCCGTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: FLHRSTCPGKGSFSRVGQTCQTH*LDPCSF
Trigger: AAAACTACACGGATCGAGCCAGTGAGTCTGACACGT...TTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR TCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGGTCTGTGGCTAGACTaGAGGTGTACATCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKGLWLD*RCTSCA
Trigger: AGCACAGGATGTACACCTTCAGTCTAGCCACAGACC...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp AGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCTCCAGAGTGGAGCCGTaGCTCACAATTAGGATGACA +
Preference number: 4 (lower is better)
Translates to: SRREIFRDIKVRLVLLQISRVEP*LTIRMT
Trigger: TGTCATCCTAATTGTGAGTCACGGCTCCACTCTGGA...GATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTTCCACTCTGAGGTTATaGCAACATCACCGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASSTLRL*QHHRGS
Trigger: AGAGCCACGGTGATGTTGTCATAACCTCAGAGTGGA...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp CACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAGTTCGAGGTTCTCACTaGCCTTCCAGGATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HRWELQRRKPEGNIPGYKVRGSH*PSRMSL
Trigger: CAAACTCATCCTGGAAGGTCAGTGAGAACCTCGAAC...TTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGTCAATGTTGAAATTTaGCTCTTTCAGCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPVNVEI*LFQLFQ
Trigger: CTGGAAGAGCTGAAAGAGGCAAATTTCAACATTGAC...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR GCA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCTTCACAGAAGCACATaGCCAGGGAAGGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASLHRST*PGKGSF
Trigger: GAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAG...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACACTTCGTCCTGCTGCGTaGGGTCCACAAAGATGTAGT +
Preference number: 4 (lower is better)
Translates to: RREIFRDIKVRLVLLQITLRPAA*GPQRCS
Trigger: ACTACATCTTTGTGGACCCCACGCAGCAGGACGAAG...TGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp AGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACTCCTTGCCGTTTGTaGAAGAAATTCCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRREIFRDIKVRLVLLQITPCRL*KKFPAA
Trigger: TGCAGCGGGGAATTTCTTCCACAAACGGCAAGGAGT...GATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCATTTCCCATCAGGAGTaGAGCATTGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLISHQE*SIAAAM
Trigger: CATGGCTGCAGCAATGCTCCACTCCTGATGGGAAAT...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp GGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGCCCACGACTCCGTCTTaGCAGACTGCAGGGGAAATT +
Preference number: 4 (lower is better)
Translates to: GNIPGYKSASRASTNHIGPTTPS*QTAGEI
Trigger: AATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGG...CCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCCCTGCAATTCTGGACTaGAAAATGCCACACGATGAT +
Preference number: 4 (lower is better)
Translates to: IFFTEAHAQGRDLSHELGPAILD*KMPHDD
Trigger: ATCATCGTGTGGCATTTTCCAGTCCAGAATTGCAGG...GCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp AATCATCCATTCCTAGATCAAACCTCTACATTGCCACTTTCTTGCTGTGTGACCCAGGCTCATGAGGGTTaGGGTGGTTTTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NHPFLDQTSTLPLSCCVTQAHEG*GGFASF
Trigger: GAAGCTGGCAAAACCACCCCAACCCTCATGAGCCTG...GGTCACACAGCAAGAAAGTGGCAATGTAGAGGTTTGATCTAGGAATGGATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp CGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACAGACACCCGTGTCCTGTaGACAGGTGTTGACGATTTG +
Preference number: 4 (lower is better)
Translates to: RREIFRDIKVRLVLLQITDTRVL*TGVDDL
Trigger: CAAATCGTCAACACCTGTCCACAGGACACGGGTGTC...TGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCCGTTTTCAAAGTCTTTaGTCCCACGACTCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLRFQSL*SHDSVL
Trigger: CAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACG...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp CGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGTCCAGAGTGGAGCCGTaGCTCACAATTAGGATGACA +
Preference number: 4 (lower is better)
Translates to: RDIKVRLVLLQITLGETKSRVEP*LTIRMT
Trigger: TGTCATCCTAATTGTGAGTCACGGCTCCACTCTGGA...CTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ACCATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGTCCAGGCACCTGGCTaGAAATCCAGAAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: TMENEVVRSFVCGESLIPVQAPG*KSRSGK
Trigger: TTTCCCGCTTCTGGATTTTCAGCCAGGTGCCTGGAC...AGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR GCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGGTGTACATCCTGTaGTTCACCCACGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETKVYIL*FTHVSD
Trigger: GTCTGACACGTGGGTGAAGCACAGGATGTACACCTT...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp GAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTATTCCCCGCTGCATCTaGTGCTGGCTTCACCATCCT +
Preference number: 4 (lower is better)
Translates to: EIFRDIKVRLVLLQITLGIPRCI*CWLHHP
Trigger: AGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAAT...ACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGGCTGCTAAGACTCCTTaGCGTTTGTGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: YFLHRSTCPGKGSFSRVGAAKTP*RLWKKF
Trigger: GAATTTCTTCCACAAACGGCAAGGAGTCTTAGCAGC...CCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CCA 90 bp ACCATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTCCCAGCCTCTGCACATaGTTTCTGCCTCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: TMENEVVRSFVCGESLIPPSLCT*FLPLHS
Trigger: AGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGG...AGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR TCA 90 bp GAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAAGGGTCATTGCAATaGTCATGCAGCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: EIFRDIKVRLVLLQITLGEGSLQ*SCSQAK
Trigger: CTTGGCCTGGCTGCATGATCATTGCAATGACCCTTC...ACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAATCTGGTCTTCACACGTaGAGAAGTCACAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKSGLHT*RSHRVS
Trigger: TGACACTCTGTGACTTCTTCACGTGTGAAGACCAGA...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp GAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGGTCTGTGGCTAGACTaGAGGTGTACATCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: EIFRDIKVRLVLLQITLGGLWLD*RCTSCA
Trigger: AGCACAGGATGTACACCTTCAGTCTAGCCACAGACC...ACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp TGGGCCGTGGGGGTCTCTGCAGTTAACCATTGGTGTAACTTGCTTCTCTGGATTAATCAGTGTCAATGTTaGAATTTGCCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WAVGVSAVNHWCNLLLWINQCQC*NLPLSA
Trigger: AGCTGAAAGAGGCAAATTTCAACATTGACACTGATT...AATCCAGAGAAGCAAGTTACACCAATGGTTAACTGCAGAGACCCCCACGGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR TCA 90 bp AGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGACTCACAATTAGGATaGCACCCGTGTCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: REIFRDIKVRLVLLQITLDSQLG*HPCPVD
Trigger: GTCCACAGGACACGGGTGTCATCCTAATTGTGAGTC...CAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp ATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGATGGCTCTCAGTTGCCTaGGATCCAGTTCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: MENEVVRSFVCGESLIPGWLSVA*DPVPPV
Trigger: AACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCA...TCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR GCA 90 bp ACCATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTTCCGTCTTGGCAGACTaGAGGGGAAATTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TMENEVVRSFVCGESLIPSVLAD*RGNSGL
Trigger: CAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGA...AGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CCA 90 bp ATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGTTCTGGGGTTTGTACTaGAATAGGGCTCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: IFRDIKVRLVLLQITLGEFWGLY*NRALRV
Trigger: GACCCTGAGAGCCCTATTCCAGTACAAACCCCAGAA...CTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGAGCTCATCCACGTTCTaGGGTTTGTACTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: RDIKVRLVLLQITLGETKSSSTF*GLYWNR
Trigger: CCTATTCCAGTACAAACCCCAGAACGTGGATGAGCT...CTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAAGCTCATCCACGTTCTaGGGTTTGTACTGGAATAGG +
Preference number: 4 (lower is better)
Translates to: TDGSYKGESRREIFRDIKSSSTF*GLYWNR
Trigger: CCTATTCCAGTACAAACCCCAGAACGTGGATGAGCT...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp AAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATGGGGAAATTCAGGTCTaGCCTGTAGTATTTCCCATC +
Preference number: 4 (lower is better)
Translates to: KPEGNIPGYKSASRASTNGEIQV*PVVFPI
Trigger: GATGGGAAATACTACAGGCCAGACCTGAATTTCCCC...ATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCCCTGCAATTCTGGACTaGAAAATGCCACACGATGAT +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLPAILD*KMPHDD
Trigger: ATCATCGTGTGGCATTTTCCAGTCCAGAATTGCAGG...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
3UTR CAA 72 bp GATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATaGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DIKVRLVLLQIT*GETKTPLETAA
Trigger: TGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTAATCAGTGTCAATGTTaGAATTTGCCTCTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNANQCQC*NLPLSA
Trigger: AGCTGAAAGAGGCAAATTTCAACATTGACACTGATT...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR TCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTATCCTTCGTGTGTGGTaGGTCTTTAATTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETILRVW*VFNSWK
Trigger: CTTCCAGGAATTAAAGACTCACCACACACGAAGGAT...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CCA 90 bp ATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGAAGAGAGATGCTTCCGTaGCGAAGGTCATGGCGAATT +
Preference number: 4 (lower is better)
Translates to: MENEVVRSFVCGESLIPGREMLP*RRSWRI
Trigger: AATTCGCCATGACCTTCGCCACGGAAGCATCTCTCT...TCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTACATACCTGCAATTCTaGACTGGAAAATGCCACACG +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETTYLQF*TGKCHT
Trigger: CGTGTGGCATTTTCCAGTCCAGAATTGCAGGTATGT...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR TCA 90 bp AGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGTCTGGTCTTCACACGTaGAGAAGTCACAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: REIFRDIKVRLVLLQITLSGLHT*RSHRVS
Trigger: TGACACTCTGTGACTTCTTCACGTGTGAAGACCAGA...CAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR TCA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCGATATGGCTAAAGAGTaGTGGACCCAGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLDMAKE*WTQKKK
Trigger: TTTCTTTTTCTGGGTCCATCACTCTTTAGCCATATC...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR TCA 90 bp GATGTGGTTTTCCATTTGAAAAGTGAGCTCCTTGGAGCTCCTTGGTTGTTGATTTTTCCATTTGAAAAGTaGGCTCCTTGGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DVVFHLKSELLGAPWLLIFPFEK*APWSSL
Trigger: CAAGGAGCTCCAAGGAGCTCACTTTTCAAATGGAAA...AATCAACAACCAAGGAGCTCCAAGGAGCTCACTTTTCAAATGGAAAACCACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR GCA 90 bp GGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGGCTGCTAAGACTCCTTaGCGTTTGTGGAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: GNIPGYKSASRASTNHIGAAKTP*RLWKKF
Trigger: GAATTTCTTCCACAAACGGCAAGGAGTCTTAGCAGC...CCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR GCA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTCTCTTGTTCTTTCCATaGCTTTCTTTCATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FRDIKVRLVLLQITLGETLLFFP*LSFIPA
Trigger: GGCAGGAATGAAAGAAAGGCATGGAAAGAACAAGAG...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp AGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGCTTCACCATCCTTTCTaGAGTTCAGGTCTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: REIFRDIKVRLVLLQITLLHHPF*SSGLWL
Trigger: TAGCCACAGACCTGAACTCCAGAAAGGATGGTGAAG...CAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTCTACAAATCACATTaGGTGAGACTAAGACGCCTC +
Preference number: 4 (lower is better)
Translates to: RREIFRDIKVRLVLLQITFYKSH*VRLRRL
Trigger: GAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA...TGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CCA 90 bp CGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACACCATGGAAAATGAAGTaGTTAGATCCTTCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RREIFRDIKVRLVLLQITPWKMK*LDPSCV
Trigger: CACACACGAAGGATCTAACCACTTCATTTTCCATGG...TGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR GCA 90 bp TTTCTGAATTTAGGAAATGAAGACTCGATGAACTCAATGGTCTCTTCTGTTTACATGAGCTCTGTTCTTTaGACACTGGCGCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FLNLGNEDSMNSMVSSVYMSSVL*TLALAL
Trigger: GAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCAT...GTAAACAGAAGAGACCATTGAGTTCATCGAGTCTTCATTTCCTAAATTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CCA 90 bp GAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTTGGTCGATGGTTTTCTaGGACCATTTTATTGACTAT +
Preference number: 4 (lower is better)
Translates to: EIFRDIKVRLVLLQITLGWSMVF*DHFIDY
Trigger: ATAGTCAATAAAATGGTCCCAGAAAACCATCGACCA...ACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS CCA 90 bp AGAGTGCTGCGGTCCACTGGCAGCTGTGGCCCAGGGGGATGGCTCTaGCCAGCTGCTCCAGCGTCCTCTGGTGGTGGGGGTAGAACTTGT +
Preference number: 5 (lower is better)
Translates to: RVLRSTGSCGPGGWL*PAAPASSGGGGRTC
Trigger: ACAAGTTCTACCCCCACCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCATCCCCCTGGGCCACAGCTGCCAGTGGACCGCAGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS TCA 90 bp ATCCGTGTAGTTTTCCGGCAGGAAGCCCCGGCAGCCCGTCCGCTGTaGGATCCCAATCACCCAGCCCTCGCTGGCTTCGTCCTGCTGCGT +
Preference number: 5 (lower is better)
Translates to: IRVVFRQEAPAARPL*DPNHPALAGFVLLR
Trigger: ACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGCCGGGGCTTCCTGCCGGAAAACTACACGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 90 bp CCCGGCAGCCCGTCCGCTGTGAGATCCCAATCACCCAGCCCTCGCTaGCTTCGTCCTGCTGCGTGGGGTCCACAAAGATGTAGTCACCAG +
Preference number: 5 (lower is better)
Translates to: PGSPSAVRSQSPSPR*LRPAAWGPQRCSHQ
Trigger: CTGGTGACTACATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 90 bp TCTCAGGGTCTGGTAGTGCACAAAGCGCATGTCTCGGGAGTAGAGTaGTGCGGTCCACTGGCAGCTGTGGCCCAGGGGGATGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SQGLVVHKAHVSGVE*CGPLAAVAQGDGSG
Trigger: GCCAGAGCCATCCCCCTGGGCCACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGACATGCGCTTTGTGCACTACCAGACCCTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp GGAGCCCAGGAGCCTGTCTCCAGCTCTCTTCAGCGCCTCGTACAGGCATTCCACGGGCTGCTGCGGCTCTaGAGCTTGTTGGAGACCTTG +
Preference number: 5 (lower is better)
Translates to: GAQEPVSSSLQRLVQAFHGLLRL*SLLETL
Trigger: CAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCCC...GTGGAATGCCTGTACGAGGCGCTGAAGAGAGCTGGAGACAGGCTCCTGGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CAA 90 bp CTTTGGCAGGAAGCCGTACCCTACACCCCTGCAGCTCCATGCCGGGGGCCGCAGTTTGCACACTGGCGCTaGCTCTCTCTCCAGAACTCT +
Preference number: 5 (lower is better)
Translates to: LWQEAVPYTPAAPCRGPQFAHWR*LSLQNS
Trigger: AGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAA...CTGCGGCCCCCGGCATGGAGCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CAA 90 bp TTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGGGGCTGCTGCGGCTCTaGAGCTTGTTGGAGACCTTG +
Preference number: 5 (lower is better)
Translates to: FLQLNAAFAPWVRVFTGGGLLRL*SLLETL
Trigger: CAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCCC...CCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp ACCTGCCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAAGACTCCTTGCCGTTaGTGGAAGAAATTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: TCPVLPAAGLVDDGSTDGKTPCR*WKKFPA
Trigger: AGCGGGGAATTTCTTCCACAAACGGCAAGGAGTCTT...CCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CCCTGTGCTCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTAACAGGTGTTGACGATTaGCACCATGCTCGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: PCAPRSWAGGRWVHRWELTGVDD*HHARRA
Trigger: TGCACGGCGAGCATGGTGCAAATCGTCAACACCTGT...TAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGAGCACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS GCA 90 bp CTTGAGCTTGTTGGAGACCTTGGCGTAGAGCTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTAGGCCAAGAAGCTCGCCTGCACACA +
Preference number: 5 (lower is better)
Translates to: LELVGDLGVELRLPR*HLFLPLGQEARLHT
Trigger: TGTGTGCAGGCGAGCTTCTTGGCCTAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000634453.1
ENST00000635108.1
ENST00000635325.1
CDS GCA 90 bp AGATGCTTCCGTGGCGAAGGTCATGGCGAATTCCCGGATGACGTCTaGGGGGCTGCCACTGACGAAGAAGCCGAGGTAGCTGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: RCFRGEGHGEFPDDV*GAATDEEAEVADGG
Trigger: TCCTCCATCAGCTACCTCGGCTTCTTCGTCAGTGGCAGCCCCGCAGACGTCATCCGGGAATTCGCCATGACCTTCGCCACGGAAGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAGTCAGATGCAGCTGTTaGGTGCAAGGCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: PRSWAGGRWVHRWELQRRVRCSC*VQGFTE
Trigger: CTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGAC...TCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTCCCACGACTCCGTCTaGGCAGACTGCAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRSHDSV*ADCRGN
Trigger: ATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGA...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCTCCCACGACTCCGTCTaGGCAGACTGCAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LQLNAAFAPWVRVFTGGFSHDSV*ADCRGN
Trigger: ATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGA...GAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp GGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGCACCGTGGCTCTCAGTaGCCTGAGATCCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: GWWTMGPQMGVTKAKAGGHRGSQ*PEIQFL
Trigger: GAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTG...CCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS TCA 90 bp CCATCAGGAGTGGAGCATTGCTGCAGCCATGCCTTCCCGAAGATCTaGTCCACTCTCTCCCCGTGGCGAACCACCAGCACGCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PSGVEHCCSHAFPKI*STLSPWRTTSTLFL
Trigger: AAGGAAGAGCGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 90 bp CTTGTGCTCTGGGGATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTaGTTGGAGGCTTTGGAAGGTACTGCTTCTCCTGGGACATCTTCC +
Preference number: 5 (lower is better)
Translates to: LVLWGSLQVSGNPGW*LEALEGTASPGTSS
Trigger: GGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCCCCAGAGCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS-3UTR CAA 90 bp AGGTGCACTGCTTTGGCAGGAAGCCGTACCCTACACCCCTGCAGCTCCATGCCGCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: RCTALAGSRTLHPCSSMPHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...CGGCATGGAGCTGCAGGGGTGTAGGGTACGGCTTCCTGCCAAAGCAGTGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS-3UTR CAA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGGTCAGATGCAGCTGTTaGGTGCAAGGCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRVRCSC*VQGFTE
Trigger: CTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGAC...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp TCCCCGCAGCTGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGTCCACGTTCTGGGGTTaGTACTGGAATAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SPQLGWWTMGPQMGVTKASTFWG*YWNRAL
Trigger: GAGAGCCCTATTCCAGTACAAACCCCAGAACGTGGA...CGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCAGCTGCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTCTTCCAGGATGAGTTaGGCCGTCTGCACACAGCGG +
Preference number: 5 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVSSRMS*AVCTQR
Trigger: CCGCTGTGTGCAGACGGCCAAACTCATCCTGGAAGA...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000635325.1
CDS GCA 90 bp GCTCCCACATTCTTCTTGTCTTCCCGGTGCCCCTGTAGAGCTGCCTaGTGGGCCATTGTGTTTTGCTGTGGAGCTACCCACTGGGCCATT +
Preference number: 5 (lower is better)
Translates to: APTFFLSSRCPCRAA*WAIVFCCGATHWAI
Trigger: AATGGCCCAGTGGGTAGCTCCACAGCAAAACACAATGGCCCAGCAGGCAGCTCTACAGGGGCACCGGGAAGACAAGAAGAATGTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS GCA 90 bp CTTGAGCTTGTTGGAGACCTTGGCGTAGAGCTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTAGGCCAAGAAGCTCGCTGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LELVGDLGVELRLPR*HLFLPLGQEARWFF
Trigger: AAAGAACCAGCGAGCTTCTTGGCCTAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAGCTCTACGCCAAGGTCTCCAACAAGCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635189.1
CDS CCA 90 bp GTGAGATCCCAATCACCCAGCCCTCGCTGGCTTCGTCCTGCTGCGTaGGGTCCACAAAGATGTAGTCACCAGGACTTAGCGTCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: VRSQSPSPRWLRPAA*GPQRCSHQDLASAH
Trigger: ATGAGCTGACGCTAAGTCCTGGTGACTACATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 90 bp TGCTCTGGGGATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTGGTTaGAGGCTTTGGAAGGTACTGCTTCTCCTGGGACATCTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: CSGDPCKSRAIRGGG*RLWKVLLLLGHLPE
Trigger: TTCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCCCCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 90 bp AGTCTTGTGCTCTGGGGATCCCTGCAAGTCTCGGGCAATCCGGGGTaGTGGTTGGAGGCTTTGGAAGGTACTGCTTCTCCTGGGACATCT +
Preference number: 5 (lower is better)
Translates to: SLVLWGSLQVSGNPG*WLEALEGTASPGTS
Trigger: AGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCCCCAGAGCACAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS-3UTR CAA 90 bp GTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGTTTGCACACTGGCGCTaGCTCTCTCTCCAGAACTCT +
Preference number: 5 (lower is better)
Translates to: VPPVKCCVRPVGQGLHRWFAHWR*LSLQNS
Trigger: AGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAA...CCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: PPVKCCVRPVGQGLHRWVHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...AACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTCCACGTTCTGGGGTTaGTACTGGAATAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRSTFWG*YWNRAL
Trigger: GAGAGCCCTATTCCAGTACAAACCCCAGAACGTGGA...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp GATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACATCAGGAGTGGAGCATaGCTGCAGCCATGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: DPVPPVKCCVRPVGQGLHIRSGA*LQPCLP
Trigger: GGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGAT...GTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGATCAGGAGTGGAGCATaGCTGCAGCCATGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRIRSGA*LQPCLP
Trigger: GGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGAT...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACTCCTGTGGACAGGTGTaGACGATTTGCACCATGCTC +
Preference number: 5 (lower is better)
Translates to: PVKCCVRPVGQGLHRWVHSCGQV*TICTML
Trigger: GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA...GTGAACCCACCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS GCA 90 bp GGTGGGGGTAGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGTCTGCTAAGAGAGATGCTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: GGGRTCGPRSDAAVW*KASRSSLLREMLPW
Trigger: CCACGGAAGCATCTCTCTTAGCAGACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291535.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 90 bp TGGCCTGTAGTATTTCCCATCAGGAGTGGAGCATTGCTGCAGCCATaGCTTCCCGAAGATCTGATCCACTCTCTCCCCGTGGCGAACCAC +
Preference number: 5 (lower is better)
Translates to: WPVVFPIRSGALLQP*LPEDLIHSLPVANH
Trigger: GTGGTTCGCCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGATGGGAAATACTACAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 90 bp GGTGGTGGGGGTAGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGCAGTCTGCTAAGAGAGATGCTTCCG +
Preference number: 5 (lower is better)
Translates to: GGGGRTCGPRSDAAV*CKASRSSLLREMLP
Trigger: CGGAAGCATCTCTCTTAGCAGACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACCCCCACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291535.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGGGGCTGCTGCGGCTCTaGAGCTTGTTGGAGACCTTG +
Preference number: 5 (lower is better)
Translates to: HHRGSQLPEIQFLQLNAAGLLRL*SLLETL
Trigger: CAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCCC...CGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CAA 90 bp GACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAACTCGGGCTGCTGCGGCTCTaGAGCTTGTTGGAGACCTTG +
Preference number: 5 (lower is better)
Translates to: DLMSSVLCTLALALSPELGLLRL*SLLETL
Trigger: CAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCCC...GAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CAA 90 bp GCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCGGGGTCCACGTTCTGGGGTTaGTACTGGAATAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: AQGRDLSHELGKIPTFPGSTFWG*YWNRAL
Trigger: GAGAGCCCTATTCCAGTACAAACCCCAGAACGTGGA...CCCCGGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGTCCTGTGGACAGGTGTaGACGATTTGCACCATGCTC +
Preference number: 5 (lower is better)
Translates to: WAGGRWVHRWELQRRKPESCGQV*TICTML
Trigger: GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CAGGATGAGTTTGGCCGTCTGCACACAGCGGAGGGCTCTGAGTGGGGCCCTGGGGATGTGGTTTTCCATTaGAAAAGTGAGCTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: QDEFGRLHTAEGSEWGPGDVVFH*KSELLG
Trigger: TCCAAGGAGCTCACTTTTCAAATGGAAAACCACATC...CCCAGGGCCCCACTCAGAGCCCTCCGCTGTGTGCAGACGGCCAAACTCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS CCA 90 bp CCCACATTCTTCTTGTCTTCCCGGTGCCCCTGTAGAGCTGCCTGCTaGGCCATTGTGTTTTGCTGTGGAGCTACCCACTGGGCCATTTTT +
Preference number: 5 (lower is better)
Translates to: PTFFLSSRCPCRAAC*AIVFCCGATHWAIF
Trigger: AAAAATGGCCCAGTGGGTAGCTCCACAGCAAAACACAATGGCCCAGCAGGCAGCTCTACAGGGGCACCGGGAAGACAAGAAGAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 90 bp TGCATTCCTCCTTTCCATCCAGCACCGAGGGGCCTGGTGTTGGAATaGAGGGTTCCTTGGGCCCTGATGGAATTCCTTGAAATGGGTGGA +
Preference number: 5 (lower is better)
Translates to: CIPPFHPAPRGLVLE*RVPWALMEFLEMGG
Trigger: TCCACCCATTTCAAGGAATTCCATCAGGGCCCAAGGAACCCTCCATTCCAACACCAGGCCCCTCGGTGCTGGATGGAAAGGAGGAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS-3UTR CAA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGTTTGCACACTGGCGCTaGCTCTCTCTCCAGAACTCT +
Preference number: 5 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRFAHWR*LSLQNS
Trigger: AGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAA...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp TTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: LPEIQFLQLNAAFAPWVRHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...CCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp ACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCCCTCCCACGACTCCGTCTaGGCAGACTGCAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: TCPGKGSFSRVGQNPHIPSHDSV*ADCRGN
Trigger: ATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGA...GGGAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAATCCTGTGGACAGGTGTaGACGATTTGCACCATGCTC +
Preference number: 5 (lower is better)
Translates to: LVDDGSTDGSYKGESRRESCGQV*TICTML
Trigger: GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA...TTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp TGGGCTGGTGGACGATGGGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGAGGCTCTAGTTAAATaGCTCAGCCTCAGGTTAGGG +
Preference number: 5 (lower is better)
Translates to: WAGGRWVHRWELQRRKPEEALVK*LSLRLG
Trigger: CCCTAACCTGAGGCTGAGCAATTTAACTAGAGCCTC...CTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACCCATCGTCCACCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CAA 90 bp AGAGTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTGCAAGGTGCACTGCTTaGGCAGGAAGCCGTACCCTA +
Preference number: 5 (lower is better)
Translates to: RVSRVGRPHELCSLHTGAARCTA*AGSRTL
Trigger: TAGGGTACGGCTTCCTGCCAAAGCAGTGCACCTTGC...AGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS TCA 90 bp GGTCCCGTGAAGAAGTCACAGAGTGTCACGTGTGGGAAGACCTCATaGGCTCTGTTCTTTGCACACTGGCGCTTGCTCTCTCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: GPVKKSQSVTCGKTS*ALFFAHWRLLSLQN
Trigger: GTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACTTCTTCACGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 90 bp GAATCAGACGGCTGGTCCCGTGAAGAAGTCACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGGCGCTTGCT +
Preference number: 5 (lower is better)
Translates to: ESDGWSREEVTECHV*EDLMSSVLCTLALA
Trigger: AGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACTTCTTCACGGGACCAGCCGTCTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 90 bp GATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTGGTTGGAGGCTTTaGAAGGTACTGCTTCTCCTGGGACATCTTCCAGAAATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: DPCKSRAIRGGGWRL*KVLLLLGHLPEIFS
Trigger: GGAAAAGATTTCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS-3UTR CAA 90 bp TCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGCCGTGCACCTGTCCATGAAGACTCCTTGCCGTTaGTGGAAGAAATTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: SCGQVLTICTMLAVHLSMKTPCR*WKKFPA
Trigger: AGCGGGGAATTTCTTCCACAAACGGCAAGGAGTCTT...CATGGACAGGTGCACGGCGAGCATGGTGCAAATCGTCAACACCTGTCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp GGTCCACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATCCCACGACTCCGTCTaGGCAGACTGCAGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: GPQMGVTKAKAGGKYSGISHDSV*ADCRGN
Trigger: ATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGA...TATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCTTCACCGGTCGTTTTCAAAGTCTTaGATCCCACGACTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: PVPPVKCCVRPVGQGLHRSFSKS*IPRLRL
Trigger: AAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGA...CCGGTGAAGACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp ACTTTCGTAGGGATTAGGAAGGCTCAGCTGCAGTTAGCTGGGGAAGGAGAACGTTCTTCCAGGATGAGTTaGGCCGTCTGCACACAGCGG +
Preference number: 5 (lower is better)
Translates to: TFVGIRKAQLQLAGEGERSSRMS*AVCTQR
Trigger: CCGCTGTGTGCAGACGGCCAAACTCATCCTGGAAGA...ACGTTCTCCTTCCCCAGCTAACTGCAGCTGAGCCTTCCTAATCCCTACGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS-3UTR CAA 90 bp TGGGCCGTGGGGGTCTCTGCAGTTAACCATTGGTGTAACTTGCTTCTCTGGATTCACCGTGGCTCTCAGTaGCCTGAGATCCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: WAVGVSAVNHWCNLLLWIHRGSQ*PEIQFL
Trigger: GAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTG...AATCCAGAGAAGCAAGTTACACCAATGGTTAACTGCAGAGACCCCCACGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS CCA 90 bp GGTGGTGGGGGTAGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGCAGTATTTTTGAAGGATGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: GGGGRTCGPRSDAAV*CKASRSSIFEGCSG
Trigger: GCCACTACATCCTTCAAAAATACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACCCCCACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CAA 90 bp AGCGCCTCGTACAGGCATTCCACCTTCTGGTCTTCACACGTGAAGAAGTCACAGTTTGCACACTGGCGCTaGCTCTCTCTCCAGAACTCT +
Preference number: 5 (lower is better)
Translates to: SASYRHSTFWSSHVKKSQFAHWR*LSLQNS
Trigger: AGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAA...CTGTGACTTCTTCACGTGTGAAGACCAGAAGGTGGAATGCCTGTACGAGGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CAA 90 bp TGGGCCGTGGGGGTCTCTGCAGTTAACCATTGGTGTAACTTGCTTCTCTGGATTGTCAGATGCAGCTGTTaGGTGCAAGGCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: WAVGVSAVNHWCNLLLWIVRCSC*VQGFTE
Trigger: CTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGAC...AATCCAGAGAAGCAAGTTACACCAATGGTTAACTGCAGAGACCCCCACGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CAA 90 bp ATTAGGATGACACCCGTGTCCTGTGGACAGGTGTTGACGATTTGCACCATGCTCGTCAGATGCAGCTGTTaGGTGCAAGGCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: IRMTPVSCGQVLTICTMLVRCSC*VQGFTE
Trigger: CTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGAC...GAGCATGGTGCAAATCGTCAACACCTGTCCACAGGACACGGGTGTCATCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTCACCGTGGCTCTCAGTaGCCTGAGATCCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAHRGSQ*PEIQFL
Trigger: GAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTG...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS GCA 90 bp GGTGGGGGTAGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGTATTTTTGAAGGATGTAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GGGRTCGPRSDAAVW*KASRSSIFEGCSGS
Trigger: TGAGCCACTACATCCTTCAAAAATACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACCCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS CCA 90 bp CTAGTTAAATTGCTCAGCCTCAGGTTAGGGCCATGTCCAGGCACCTaGCTGAAAATCCAGAAGCGGGAAACGGAAGTGCCTGCTAAGAGA +
Preference number: 5 (lower is better)
Translates to: LVKLLSLRLGPCPGT*LKIQKRETEVPAKR
Trigger: TCTCTTAGCAGGCACTTCCGTTTCCCGCTTCTGGATTTTCAGCCAGGTGCCTGGACATGGCCCTAACCTGAGGCTGAGCAATTTAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CAA 90 bp GTCACAGAGTGTCACGTGTGGGAAGACCTCATGAGCTCTGTTCTTTGCACACTGCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: VTECHVWEDLMSSVLCTLHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...CAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000634718.1
ENST00000635108.1
CDS-3UTR CAA 90 bp TATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGATCAGGAGTGGAGCATaGCTGCAGCCATGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: YFLHRSTCPGKGSFSRVGIRSGA*LQPCLP
Trigger: GGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGAT...CCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCATCAGGAGTGGAGCATaGCTGCAGCCATGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLIRSGA*LQPCLP
Trigger: GGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGAT...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp TATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGACAGGTGTTGACGATTaGCACCATGCTCGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: YFLHRSTCPGKGSFSRVGTGVDD*HHARRA
Trigger: TGCACGGCGAGCATGGTGCAAATCGTCAACACCTGT...CCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CCCCGTGGGTCAGGGTCTTCACCGGTGGGTTCACCAACTCCCATTTTCCTTCCTTCAGTGTTGCTGTTATaGTTACCTTTCCTACTAGAC +
Preference number: 5 (lower is better)
Translates to: PRGSGSSPVGSPTPIFLPSVLLL*LPFLLD
Trigger: GTCTAGTAGGAAAGGTAACAATAACAGCAACACTGA...AGGAAGGAAAATGGGAGTTGGTGAACCCACCGGTGAAGACCCTGACCCACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CAA 90 bp CCTGAGATCCAGTTCCTCCAGTTAAATGCTGCGTTCGCCCCGTGGGTCAGGGTCAACCATTGGTGTAACTaGCTTCTCTGGATTCCATTT +
Preference number: 5 (lower is better)
Translates to: PEIQFLQLNAAFAPWVRVNHWCN*LLWIPF
Trigger: AAATGGAATCCAGAGAAGCAAGTTACACCAATGGTT...GACCCTGACCCACGGGGCGAACGCAGCATTTAACTGGAGGAACTGGATCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CAA 90 bp TATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: YFLHRSTCPGKGSFSRVGHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...CCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTAAGACTCCTTGCCGTTaGTGGAAGAAATTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNAKTPCR*WKKFPA
Trigger: AGCGGGGAATTTCTTCCACAAACGGCAAGGAGTCTT...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398367.1
ENST00000473381.1
CDS-3UTR CAA 90 bp ATTTTCTTCACAGAAGCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAGACTCCTTGCCGTTaGTGGAAGAAATTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: IFFTEAHAQGRDLSHELGKTPCR*WKKFPA
Trigger: AGCGGGGAATTTCTTCCACAAACGGCAAGGAGTCTT...GCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGCTTCTGTGAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp GCACATGCCCAGGGAAGGGATCTTTCTCACGAGTTGGGCAAAATCCCCACATTCTCGTTTTCAAAGTCTTaGATCCCACGACTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: AHAQGRDLSHELGKIPTFSFSKS*IPRLRL
Trigger: AAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGA...GAATGTGGGGATTTTGCCCAACTCGTGAGAAAGATCCCTTCCCTGGGCATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473381.1
ENST00000635325.1
CDS-3UTR CAA 90 bp AATCATCCATTCCTAGATCAAACCTCTACATTGCCACTTTCTTGCTGTGTGACCCCTTCCAGGATGAGTTaGGCCGTCTGCACACAGCGG +
Preference number: 5 (lower is better)
Translates to: NHPFLDQTSTLPLSCCVTPSRMS*AVCTQR
Trigger: CCGCTGTGTGCAGACGGCCAAACTCATCCTGGAAGG...GGTCACACAGCAAGAAAGTGGCAATGTAGAGGTTTGATCTAGGAATGGATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CAA 90 bp ACCATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGGCTGCTGCGGCTCTaGAGCTTGTTGGAGACCTTG +
Preference number: 5 (lower is better)
Translates to: TMENEVVRSFVCGESLIPGLLRL*SLLETL
Trigger: CAAGGTCTCCAACAAGCTCAAGAGCCGCAGCAGCCC...AGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CAA 90 bp AGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCTCCACGTTCTGGGGTTaGTACTGGAATAGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SRREIFRDIKVRLVLLQISTFWG*YWNRAL
Trigger: GAGAGCCCTATTCCAGTACAAACCCCAGAACGTGGA...GATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGACAGGTGTTGACGATTaGCACCATGCTCGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: RDIKVRLVLLQITLGETKTGVDD*HHARRA
Trigger: TGCACGGCGAGCATGGTGCAAATCGTCAACACCTGT...CTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp ACAGATGGGAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAATTTGCACACTGGCGCTaGCTCTCTCTCCAGAACTCT +
Preference number: 5 (lower is better)
Translates to: TDGSYKGESRREIFRDIKFAHWR*LSLQNS
Trigger: AGAGTTCTGGAGAGAGAGCAAGCGCCAGTGTGCAAA...TTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTCCCATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp CGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTAAGCATGAGCTCTGTTCTTaGCACACTGGCGCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: RDIKVRLVLLQITLGETKHELCS*HTGACS
Trigger: AGAGCAAGCGCCAGTGTGCAAAGAACAGAGCTCATG...CTTAGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp ATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTGGATCTTCCAGGATGAGTTaGGCCGTCTGCACACAGCGG +
Preference number: 5 (lower is better)
Translates to: MENEVVRSFVCGESLIPGSSRMS*AVCTQR
Trigger: CCGCTGTGTGCAGACGGCCAAACTCATCCTGGAAGA...TCCAGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS-3UTR CAA 90 bp CAACATCACCGTGGCTCTCAGTTGCCTGAGATCCAGTTCCTCCAGTTAAATGCTGATCAAACCTCTACATaGCCACTTTCTTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: QHHRGSQLPEIQFLQLNADQTST*PLSCCV
Trigger: CACACAGCAAGAAAGTGGCAATGTAGAGGTTTGATC...AGCATTTAACTGGAGGAACTGGATCTCAGGCAACTGAGAGCCACGGTGATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CAA 90 bp TTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCACATTGGGTGAGACTCTTGGAGCTCCTTGGTaGTTGATTTTTCCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: FRDIKVRLVLLQITLGETLGAPW*LIFPPL
Trigger: GAGGGGAGGAAAAATCAACAACCAAGGAGCTCCAAG...AGTCTCACCCAATGTGATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS-3UTR CAA 90 bp TTCTACAAATCACATTGGGTGAGACTAAGACGCCTCTGGAAACAGCAGCATCTCTCGTTTTCAAAGTCTTaGATCCCACGACTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: FYKSHWVRLRRLWKQQHLSFSKS*IPRLRL
Trigger: AAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGA...GAGATGCTGCTGTTTCCAGAGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp AGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCTCGTTTTCAAAGTCTTaGATCCCACGACTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: SRREIFRDIKVRLVLLQISFSKS*IPRLRL
Trigger: AAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGA...GATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp GAGTTACAAAGGCGAAAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCTTCTACAAATCACATaGGGTGAGACTAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: ELQRRKPEGNIPGYKSASLLQIT*GETKTP
Trigger: AGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAG...AGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTTTCGCCTTTGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp AAGCCGGAGGGAAATATTCCGGGATATAAAAGTGCGTCTCGTGCTTCTACAAATCTTCTACAAATCACATaGGGTGAGACTAAGACGCCT +
Preference number: 5 (lower is better)
Translates to: KPEGNIPGYKSASRASTNLLQIT*GETKTP
Trigger: AGGCGTCTTAGTCTCACCCAATGTGATTTGTAGAAG...ATTTGTAGAAGCACGAGACGCACTTTTATATCCCGGAATATTTCCCTCCGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319294.11
ENST00000473381.1
CDS-3UTR CAA 90 bp ACCATGGAAAATGAAGTGGTTAGATCCTTCGTGTGTGGTGAGTCTTTAATTCCTCACGGAGCAGTATTTTaGAAGGATGTAGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: TMENEVVRSFVCGESLIPHGAVF*KDVVAH
Trigger: GTGAGCCACTACATCCTTCAAAAATACTGCTCCGTG...AGGAATTAAAGACTCACCACACACGAAGGATCTAACCACTTCATTTTCCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS CCA 72 bp CGGTCCACTGGCAGCTGTGGCCCAGGGGGATGGCTCTaGCCAGCTGCTCCAGCGTCCTCTGGTGGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: RSTGSCGPGGWL*PAAPASSGGGG
Trigger: ACCCCCACCACCAGAGGACGCTGGAGCAGCTGGCCAGAGCCATCCCCCTGGGCCACAGCTGCCAGTGGACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp CTGGCACCAGCCTTACTGGCTGGGCCCCGGGGTCTCTaGGCAGTACTCACGCGGTGTGCACCGGGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: LAPALLAGPRGL*AVLTRCAPGSP
Trigger: TGGGCTTCCCGGTGCACACCGCGTGAGTACTGCCCAGAGACCCCGGGGCCCAGCCAGTAAGGCTGGTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634718.1
CDS TCA 72 bp GTTTTCCGGCAGGAAGCCCCGGCAGCCCGTCCGCTGTaGGATCCCAATCACCCAGCCCTCGCTGGCTTCGTC +
Preference number: 6 (lower is better)
Translates to: VFRQEAPAARPL*DPNHPALAGFV
Trigger: GACGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCACAGCGGACGGGCTGCCGGGGCTTCCTGCCGGAAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 72 bp GTAGTGCACAAAGCGCATGTCTCGGGAGTAGAGTGCTaGGGTCCACTGGCAGCTGTGGCCCAGGGGGATGGC +
Preference number: 6 (lower is better)
Translates to: VVHKAHVSGVEC*GPLAAVAQGDG
Trigger: GCCATCCCCCTGGGCCACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGACATGCGCTTTGTGCACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 72 bp GTTGGAGACCTTGGCGTAGAGCTGCGTCTCCCCCGCTaGCATCTCTTCCTGCCCTTAGGCCAAGAAGCTCGC +
Preference number: 6 (lower is better)
Translates to: VGDLGVELRLPR*HLFLPLGQEAR
Trigger: GCGAGCTTCTTGGCCTAAGGGCAGGAAGAGATGGCAGCGGGGGAGACGCAGCTCTACGCCAAGGTCTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000634453.1
ENST00000634718.1
ENST00000635108.1
ENST00000635189.1
ENST00000635325.1
CDS GCA 72 bp CTGGTAGTGCACAAAGCGCATGTCTCGGGAGTAGAGTaGTGCGGTCCACTGGCAGCTGTGGCCCAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: LVVHKAHVSGVE*CGPLAAVAQGD
Trigger: ATCCCCCTGGGCCACAGCTGCCAGTGGACCGCAGCACTCTACTCCCGAGACATGCGCTTTGTGCACTACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp CCGTCCGCTGTGAGATCCCAATCACCCAGCCCTCGCTaGCTTCGTCCTGCTGCGTGGGGTCCACAAAGATGT +
Preference number: 6 (lower is better)
Translates to: PSAVRSQSPSPR*LRPAAWGPQRC
Trigger: ACATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTGGGATCTCACAGCGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS TCA 72 bp GTGGAGCATTGCTGCAGCCATGCCTTCCCGAAGATCTaGTCCACTCTCTCCCCGTGGCGAACCACCAGCACG +
Preference number: 6 (lower is better)
Translates to: VEHCCSHAFPKI*STLSPWRTTST
Trigger: CGTGCTGGTGGTTCGCCACGGGGAGAGAGTGGATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS TCA 72 bp GTGGGTGTGCCCTTCCTTAAGCCCCTCTGGCGGAGCTaGGTAGAGCAGTGGCTGTCTGTCTCTCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VGVPFLKPLWRS*VEQWLSVSPFS
Trigger: GGAGAAGGGAGAGACAGACAGCCACTGCTCTACTCAGCTCCGCCAGAGGGGCTTAAGGAAGGGCACACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp CAATCACCCAGCCCTCGCTGGCTTCGTCCTGCTGCGTaGGGTCCACAAAGATGTAGTCACCAGGACTTAGCG +
Preference number: 6 (lower is better)
Translates to: QSPSPRWLRPAA*GPQRCSHQDLA
Trigger: CGCTAAGTCCTGGTGACTACATCTTTGTGGACCCCACGCAGCAGGACGAAGCCAGCGAGGGCTGGGTGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp CTCTGGGGATCCCTGCAAGTCTCGGGCAATCCGGGGTaGTGGTTGGAGGCTTTGGAAGGTACTGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: LWGSLQVSGNPG*WLEALEGTASP
Trigger: AGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 72 bp GGATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTGGTaGGAGGCTTTGGAAGGTACTGCTTCTCCTGGGACA +
Preference number: 6 (lower is better)
Translates to: GSLQVSGNPGWW*EALEGTASPGT
Trigger: TGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 90 bp GTGCTCTGGGGATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTGGTaGGAGGCTTTGGAAGGTACTGCTTCTCCTGGGACATCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: VLWGSLQVSGNPGWW*EALEGTASPGTSSR
Trigger: TCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCCCCAGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp TTCTTGTCTTCCCGGTGCCCCTGTAGAGCTGCCTGCTaGGCCATTGTGTTTTGCTGTGGAGCTACCCACTGG +
Preference number: 6 (lower is better)
Translates to: FLSSRCPCRAAC*AIVFCCGATHW
Trigger: CCAGTGGGTAGCTCCACAGCAAAACACAATGGCCCAGCAGGCAGCTCTACAGGGGCACCGGGAAGACAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp GATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTGGTTaGAGGCTTTGGAAGGTACTGCTTCTCCTGGGACAT +
Preference number: 6 (lower is better)
Translates to: DPCKSRAIRGGG*RLWKVLLLLGH
Trigger: ATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS GCA 72 bp TTCTTCTTGTCTTCCCGGTGCCCCTGTAGAGCTGCCTaGTGGGCCATTGTGTTTTGCTGTGGAGCTACCCAC +
Preference number: 6 (lower is better)
Translates to: FFLSSRCPCRAA*WAIVFCCGATH
Trigger: GTGGGTAGCTCCACAGCAAAACACAATGGCCCAGCAGGCAGCTCTACAGGGGCACCGGGAAGACAAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp TGTACATCCTGTGCTTCACCCACGTGTCAGACTCACTaGCTCGATCCGTGTAGTTTTCCGGCAGGAAGCCCC +
Preference number: 6 (lower is better)
Translates to: CTSCASPTCQTH*LDPCSFPAGSP
Trigger: GGGGCTTCCTGCCGGAAAACTACACGGATCGAGCCAGTGAGTCTGACACGTGGGTGAAGCACAGGATGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp TTGCTCAGCCTCAGGTTAGGGCCATGTCCAGGCACCTaGCTGAAAATCCAGAAGCGGGAAACGGAAGTGCCT +
Preference number: 6 (lower is better)
Translates to: LLSLRLGPCPGT*LKIQKRETEVP
Trigger: AGGCACTTCCGTTTCCCGCTTCTGGATTTTCAGCCAGGTGCCTGGACATGGCCCTAACCTGAGGCTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS CCA 72 bp CCTTTCCATCCAGCACCGAGGGGCCTGGTGTTGGAATaGAGGGTTCCTTGGGCCCTGATGGAATTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: PFHPAPRGLVLE*RVPWALMEFLE
Trigger: TTCAAGGAATTCCATCAGGGCCCAAGGAACCCTCCATTCCAACACCAGGCCCCTCGGTGCTGGATGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 72 bp AAATGGGTGGAACAAATCAGTTTGCCAACAGCAGAGTaGGGGCCAGGCCGCGGTAGCAGAAGTGGGTGTGCC +
Preference number: 6 (lower is better)
Translates to: KWVEQISLPTAE*GPGRGSRSGCA
Trigger: GGCACACCCACTTCTGCTACCGCGGCCTGGCCCCAACTCTGCTGTTGGCAAACTGATTTGTTCCACCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 72 bp CAAGTCTCGGGCAATCCGGGGTGGTGGTTGGAGGCTTaGGAAGGTACTGCTTCTCCTGGGACATCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: QVSGNPGWWLEA*EGTASPGTSSR
Trigger: TCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp AAGTCTCGGGCAATCCGGGGTGGTGGTTGGAGGCTTTaGAAGGTACTGCTTCTCCTGGGACATCTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: KSRAIRGGGWRL*KVLLLLGHLPE
Trigger: TTCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 90 bp GAGGTTTGCATTCCTCCTTTCCATCCAGCACCGAGGGGCCTGGTGTaGGAATGGAGGGTTCCTTGGGCCCTGATGGAATTCCTTGAAATG +
Preference number: 6 (lower is better)
Translates to: EVCIPPFHPAPRGLV*EWRVPWALMEFLEM
Trigger: CATTTCAAGGAATTCCATCAGGGCCCAAGGAACCCTCCATTCCAACACCAGGCCCCTCGGTGCTGGATGGAAAGGAGGAATGCAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 90 bp GGATCCCTGCAAGTCTCGGGCAATCCGGGGTGGTGGTTGGAGGCTTaGGAAGGTACTGCTTCTCCTGGGACATCTTCCAGAAATCTTTTC +
Preference number: 6 (lower is better)
Translates to: GSLQVSGNPGWWLEA*EGTASPGTSSRNLF
Trigger: GAAAAGATTTCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTGCCCGAGACTTGCAGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp GGTAGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGCAGTCTGCTAAGAGAG +
Preference number: 6 (lower is better)
Translates to: GRTCGPRSDAAV*CKASRSSLLRE
Trigger: CTCTCTTAGCAGACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291535.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp GTTCTTCCAGGATGGCTCTGCCTCAAGGCAGGCTCATaGTCAACAGGCAGGCTCCAGTTTTGTGCTGAAAAC +
Preference number: 6 (lower is better)
Translates to: VLPGWLCLKAGS*STGRLQFCAEN
Trigger: GTTTTCAGCACAAAACTGGAGCCTGCCTGTTGACCATGAGCCTGCCTTGAGGCAGAGCCATCCTGGAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635325.1
CDS CCA 72 bp GGCTGGTCCCGTGAAGAAGTCACAGAGTGTCACGTGTaGGAAGACCTCATGAGCTCTGTTCTTTGCACACTG +
Preference number: 6 (lower is better)
Translates to: GWSREEVTECHV*EDLMSSVLCTL
Trigger: CAGTGTGCAAAGAACAGAGCTCATGAGGTCTTCCCACACGTGACACTCTGTGACTTCTTCACGGGACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CAA 72 bp GTCTGGCCTGTAGTATTTCCCATCAGGAGTGGAGCATaGCTGCAGCCATGCCTTCCCGAAGATCTGATCCAC +
Preference number: 6 (lower is better)
Translates to: VWPVVFPIRSGA*LQPCLPEDLIH
Trigger: GTGGATCAGATCTTCGGGAAGGCATGGCTGCAGCAATGCTCCACTCCTGATGGGAAATACTACAGGCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS TCA 72 bp CACCATCCTTTCTGGAGTTCAGGTCTGTGGCTAGACTaGAGGTGTACATCCTGTGCTTCACCCACGTGTCAG +
Preference number: 6 (lower is better)
Translates to: HHPFWSSGLWLD*RCTSCASPTCQ
Trigger: CTGACACGTGGGTGAAGCACAGGATGTACACCTTCAGTCTAGCCACAGACCTGAACTCCAGAAAGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 72 bp AGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGTCTGCTAAGAGAGATG +
Preference number: 6 (lower is better)
Translates to: RTCGPRSDAAVW*KASRSSLLREM
Trigger: CATCTCTCTTAGCAGACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291535.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 72 bp TTGCCGTTTGTGGAAGAAATTCCCCGCTGCATCTGCTaGTGGCTTCACCATCCTTTCTGGAGTTCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: LPFVEEIPRCIC*WLHHPFWSSGL
Trigger: CAGACCTGAACTCCAGAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTCCACAAACGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 72 bp TCCTTGCCGTTTGTGGAAGAAATTCCCCGCTGCATCTaGTGCTGGCTTCACCATCCTTTCTGGAGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: SLPFVEEIPRCI*CWLHHPFWSSG
Trigger: ACCTGAACTCCAGAAAGGATGGTGAAGCCAGCAGCAGATGCAGCGGGGAATTTCTTCCACAAACGGCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS GCA 72 bp CAATCCGGGGTGGTGGTTGGAGGCTTTGGAAGGTACTaGTTCTCCTGGGACATCTTCCAGAAATCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: QSGVVVGGFGRY*FSWDIFQKSFP
Trigger: GGGAAAAGATTTCTGGAAGATGTCCCAGGAGAAGCAGTACCTTCCAAAGCCTCCAACCACCACCCCGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634453.1
CDS CCA 72 bp ACTCCGTCTTGGCAGACTGCAGGGGAAATTCAGGTCTaGCCTGTAGTATTTCCCATCAGGAGTGGAGCATTG +
Preference number: 6 (lower is better)
Translates to: TPSWQTAGEIQV*PVVFPIRSGAL
Trigger: CAATGCTCCACTCCTGATGGGAAATACTACAGGCCAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CAA 72 bp CCACACGATGATAATGGGGGATCGTTTTCAAAGTCTTaGATCCCACGACTCCGTCTTGGCAGACTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: PHDDNGGSFSKS*IPRLRLGRLQG
Trigger: CCCCTGCAGTCTGCCAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGATCCCCCATTATCATCGTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp ATCGTTTTCAAAGTCTTTGATCCCACGACTCCGTCTTaGCAGACTGCAGGGGAAATTCAGGTCTGGCCTGTA +
Preference number: 6 (lower is better)
Translates to: IVFKVFDPTTPS*QTAGEIQVWPV
Trigger: TACAGGCCAGACCTGAATTTCCCCTGCAGTCTGCCAAGACGGAGTCGTGGGATCAAAGACTTTGAAAACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291535.11
ENST00000319294.11
ENST00000398367.1
ENST00000473381.1
ENST00000635325.1
CDS CCA 72 bp GGTAGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTaGTGCAAGGCTTCACGGAGCAGTATTTTTGAAGGA +
Preference number: 6 (lower is better)
Translates to: GRTCGPRSDAAV*CKASRSSIFEG
Trigger: TCCTTCAAAAATACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS GCA 72 bp AGAACTTGTGGGCCAAGGTCAGATGCAGCTGTTTGGTaGAAGGCTTCACGGAGCAGTATTTTTGAAGGATGT +
Preference number: 6 (lower is better)
Translates to: RTCGPRSDAAVW*KASRSSIFEGC
Trigger: ACATCCTTCAAAAATACTGCTCCGTGAAGCCTTGCACCAAACAGCTGCATCTGACCTTGGCCCACAAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319294.11
CDS GCA 72 bp TGTATCAAAGGGTGTGTAGCTAGGGCTCAGGCTGGATaGCTGCTAGCCATAATCAGTGTTGCTGTTATTGTT +
Preference number: 6 (lower is better)
Translates to: CIKGCVARAQAG*LLAIISVAVIV
Trigger: AACAATAACAGCAACACTGATTATGGCTAGCAGGCATCCAGCCTGAGCCCTAGCTACACACCCTTTGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473381.1
CDS CCA 72 bp TTCCTACTAGACAGTCCTCAAACATACCTGCAATTCTaGACTGGAAAATGCCACACGATGATAATGGGGGAT +
Preference number: 6 (lower is better)
Translates to: FLLDSPQTYLQF*TGKCHTMIMGD
Trigger: ATCCCCCATTATCATCGTGTGGCATTTTCCAGTCCAGAATTGCAGGTATGTTTGAGGACTGTCTAGTAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473381.1