RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBAP2L (Homo sapiens)

Ensembl gene IDs: ENSG00000143569

Ensembl transcript IDs: ENST00000271877.11, ENST00000343815.10, ENST00000361546.6, ENST00000368504.5, ENST00000412596.5, ENST00000428595.1, ENST00000428931.6, ENST00000433615.5, ENST00000437652.5, ENST00000441890.5, ENST00000456325.5, ENST00000465855.5, ENST00000466173.1, ENST00000475373.1, ENST00000484696.1, ENST00000484819.1, ENST00000489076.1, ENST00000493867.1, ENST00000495676.5, ENST00000613315.4

Found 1066 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCACCAGGGTaGACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTT +
Preference number: 1 (lower is better)
Translates to: CLGVPPPRLIRTPPG*TGGSKGSAGPIAKF
Trigger: AAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGTTCACCCTGGTGGTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
3UTR GCA 90 bp GTACAGGTGGTGTTTGGTTACATGGATGAGTTCTTTAGTGATTTCTaGGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCC +
Preference number: 1 (lower is better)
Translates to: VQVVFGYMDEFFSDF*DFSAPITRAVYTVP
Trigger: GGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAAACACCACCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR TCA 90 bp GGCCATGGCCTCAGCTCAGCAGGCTCTCCTCAGTGGTCTGGTTTCTaGAACAAGACTTCAGTGCAAATTTATACACACACACAAAACACA +
Preference number: 1 (lower is better)
Translates to: GHGLSSAGSPQWSGF*NKTSVQIYTHTQNT
Trigger: TGTGTTTTGTGTGTGTGTATAAATTTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTGAGGAGAGCCTGCTGAGCTGAGGCCATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR TCA 90 bp ACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTaGTGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAG +
Preference number: 1 (lower is better)
Translates to: TTCLPEIKSNSRCVH*CFEGAAPLELEMGK
Trigger: CTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR GCA 90 bp TTGAAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTaGATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGG +
Preference number: 1 (lower is better)
Translates to: LKLHAFQKSKATAGV*IDASKVLHRLNLKW
Trigger: CCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCATGAAGCTGAGGCATaGGGTGGGCCGCTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHHEAEA*GGPLGV
Trigger: CACCCCCAGCGGCCCACCCCATGCCTCAGCTTCATG...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
3UTR-3UTR GCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATTTCATTTTATTCCACTaGCTTCAGGGGCCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNFILFH*LQGPAR
Trigger: TCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAA...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR TCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACAGTGGTCTGGTTTCTaGAACAAGACTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTQWSGF*NKTSVQ
Trigger: TTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAGCCCTCTCAGAAGATaGGACCGGGAGAAGAGGGTC +
Preference number: 2 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGSPLRR*DREKRV
Trigger: GACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
3UTR-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGACAACAGGGTGGGGATaGTATAGGAATGGGACAGAC +
Preference number: 2 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGTTGWG*YRNGTD
Trigger: GTCTGTCCCATTCCTATACCATCCCCACCCTGTTGT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
3UTR-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAACAACAGGGTGGGGATaGTATAGGAATGGGACAGAC +
Preference number: 2 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLETTGWG*YRNGTD
Trigger: GTCTGTCCCATTCCTATACCATCCCCACCCTGTTGT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
3UTR-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGCAGTGGTCTGGTTTCTaGAACAAGACTTCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: HAFQKSKATAGVCIDASKQWSGF*NKTSVQ
Trigger: TTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTG...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR CAA 90 bp ATCCCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTaGCCTTCACTTCTTTTTAGTTTATTTGCCTGGACCCATCTAAGT +
Preference number: 2 (lower is better)
Translates to: IPHPTPRFSSARRYM*PSLLFSLFAWTHLS
Trigger: ACTTAGATGGGTCCAGGCAAATAAACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR GCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATTCCCTCTCCCTTTACTaGCTGAAATCGGCTGTAGAT +
Preference number: 2 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNSLSLY*LKSAVD
Trigger: ATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGA...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR GCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAGAAACAAGACTTCAGTaGAAATTTATACACACACAC +
Preference number: 2 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTETRLQ*KFIHTH
Trigger: GTGTGTGTGTATAAATTTGCACTGAAGTCTTGTTTC...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR-3UTR CCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATGGAAATGAAGATTTGTaGTGGTTCTTTCCAGTCACC +
Preference number: 2 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYGNEDL*WFFPVT
Trigger: GGTGACTGGAAAGAACCACCACAAATCTTCATTTCC...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTCGCTTGAACTTGAAATaGGTAAGACAGGGTCAGACA +
Preference number: 2 (lower is better)
Translates to: KLHAFQKSKATAGVCIDARLNLK*VRQGQT
Trigger: TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCG...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR-3UTR GCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATTTCATTTTATTCCACTaGCTTCAGGGGCCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNFILFH*LQGPAR
Trigger: TCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAA...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR CCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAAATGAAGATTTGTGGTaGTTCTTTCCAGTCACCAGG +
Preference number: 2 (lower is better)
Translates to: LVTWMSSLVISATLAHPSNEDLW*FFPVTR
Trigger: CCTGGTGACTGGAAAGAACCACCACAAATCTTCATT...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR GCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCAGACGATACATGTTaGCTTCACTTCTTTTTAGTT +
Preference number: 2 (lower is better)
Translates to: LVTWMSSLVISATLAHPSPDDTC*LHFFLV
Trigger: AACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGG...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR CCA 72 bp AGAAGGAGACTTAGGGCTGTTGGGCTGATATATGTTTaGGGGTCCCACCTCCCCGCCTCATCCGTACACCAC +
Preference number: 3 (lower is better)
Translates to: RRRLRAVGLIYV*GSHLPASSVHH
Trigger: GTGGTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGCCCTAAGTCTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
3UTR CCA 72 bp GATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATaGGTAAGACAGGGTCAGACACATGGGGGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: DASKVLHRLNLK*VRQGQTHGGEG
Trigger: TCCCTCTCCCCCATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR TCA 72 bp CCTAATAATAAAGAAGGAGACTTAGGGCTGTTGGGCTaGTATATGTTTGGGGGTCCCACCTCCCCGCCTCAT +
Preference number: 3 (lower is better)
Translates to: PNNKEGDLGLLG*YMFGGPTSPPH
Trigger: ATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGCCCTAAGTCTCCTTCTTTATTATTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
3UTR GCA 72 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTaGATTGATGCTTCGAAGGTGCTGCACCGCTTGAAC +
Preference number: 3 (lower is better)
Translates to: HAFQKSKATAGV*IDASKVLHRLN
Trigger: GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR CCA 72 bp CCATGGCCTCAGCTCAGCAGGCTCTCCTCAGTGGTCTaGTTTCTGAAACAAGACTTCAGTGCAAATTTATAC +
Preference number: 3 (lower is better)
Translates to: PWPQLSRLSSVV*FLKQDFSANLY
Trigger: GTATAAATTTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTGAGGAGAGCCTGCTGAGCTGAGGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR-3UTR CAA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCGCCAGACGATACATGTaGCCTTCACTTCTTTTTAGT +
Preference number: 3 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPARRYM*PSLLFS
Trigger: ACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGGC...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR TCA 72 bp CTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTaGTGCTTCGAAGGTGCTGCACCGCTTGAACTTGAA +
Preference number: 3 (lower is better)
Translates to: LPEIKSNSRCVH*CFEGAAPLELE
Trigger: TTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR GCA 72 bp TTTTCCACCCAATCTCCTCTATCCCTCTCCCTTTACTaGCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGA +
Preference number: 3 (lower is better)
Translates to: FSTQSPLSLSLY*LKSAVDVAVSG
Trigger: TCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGATAGAGGAGATTGGGTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR-3UTR CAA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGGAGGAAATGAAGATTaGTGGTGGTTCTTTCCAGTC +
Preference number: 3 (lower is better)
Translates to: VTWMSSLVISATLAHPSPGGNED*WWFFPV
Trigger: GACTGGAAAGAACCACCACAAATCTTCATTTCCTCC...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR TCA 72 bp CTCAGCTCAGCAGGCTCTCCTCAGTGGTCTGGTTTCTaGAACAAGACTTCAGTGCAAATTTATACACACACA +
Preference number: 3 (lower is better)
Translates to: LSSAGSPQWSGF*NKTSVQIYTHT
Trigger: TGTGTGTGTATAAATTTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTGAGGAGAGCCTGCTGAGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR-3UTR CAA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCAGGAGGAAATGAAGATTaGTGGTGGTTCTTTCCAGTC +
Preference number: 3 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPGGNED*WWFFPV
Trigger: GACTGGAAAGAACCACCACAAATCTTCATTTCCTCC...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
3UTR GCA 72 bp CTCCTCAGTGGTCTGGTTTCTGAAACAAGACTTCAGTaGAAATTTATACACACACACAAAACACAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: LLSGLVSETRLQ*KFIHTHKTQPP
Trigger: TGGGGGCTGTGTTTTGTGTGTGTGTATAAATTTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
3UTR CCA 72 bp AATACAAATCCTATAATACATACAACAGGGTGGGGATaGTATAGGAATGGGACAGACATGAAGCTGAGGCAT +
Preference number: 3 (lower is better)
Translates to: NTNPIIHTTGWG*YRNGTDMKLRH
Trigger: ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
3UTR CCA 72 bp GGAGAAAATACAAATCCTATAATACATACAACAGGGTaGGGATGGTATAGGAATGGGACAGACATGAAGCTG +
Preference number: 3 (lower is better)
Translates to: GENTNPIIHTTG*GWYRNGTDMKL
Trigger: CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGGTTGTGGCCGGGGCTaGGGAGGAGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGGCGRG*GGGIPT
Trigger: CGTGGGGATGCCTCCTCCCCAGCCCCGGCCACAACC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGGCTACGTTGCCCGCTaGCCGTCTGGCCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGGYVAR*PSGHPA
Trigger: AGCAGGATGGCCAGACGGGCAGCGGGCAACGTAGCC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCTGGTCTGGCTACGTTaGCCGCTGCCCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGLVWLR*PLPVWP
Trigger: TGGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGSPPSW*PTTSPT
Trigger: AGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCACTTGGAGCCTGGCTTaGAGAGGCGCTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGTWSLA*RGARGG
Trigger: CCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACGGGATGGAGCTGGTCTaGCTACGTTGCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHGMELV*LRCPLP
Trigger: GGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCC...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTCTGCGGGATGGAGCTaGTCTGGCTACGTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGSAGWS*SGYVAR
Trigger: GCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCAGCTGTGGCCGGATTaGTGGGGCCCCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHQLWPD*WGPHFL
Trigger: TAGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTG...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTACGTTGCCCGCTaGCCGTCTGGCCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGYVAR*PSGHPA
Trigger: AGCAGGATGGCCAGACGGGCAGCGGGCAACGTAGCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTACGTTGCCCGCTaGCCGTCTGCTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGYVAR*PSAPPA
Trigger: AGCAGGAGGAGCAGACGGGCAGCGGGCAACGTAGCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACACTCTCGTCCACGGCTaGCACCTCTCCCCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHTLVHG*HLSPVL
Trigger: CAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCGGTTGTGGCCGGGGCTaGGGAGGAGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAGCGRG*GGGIPT
Trigger: CGTGGGGATGCCTCCTCCCCAGCCCCGGCCACAACC...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGGTTGTGGCCGGGGCTaGGGAGGAGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPGCGRG*GGGIPT
Trigger: CGTGGGGATGCCTCCTCCCCAGCCCCGGCCACAACC...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACACAGCAGGCCCATACTaGAAGGTGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHTAGPY*KVLGRP
Trigger: GGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGGGGCTTCTGCGGGATaGAGCTGGTCTGGCTACGTT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGGASAG*SWSGYV
Trigger: AACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCAGTCTCCTCCACACTaGCACCCCGGGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTQSPPH*HPGPRR
Trigger: GCGGCGCGGCCCGGGGTGTCAGTGTGGAGGAGACTG...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGACTTGGAGCCTGGCTTaGAGAGGCGCTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQTWSLA*RGARGG
Trigger: CCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGTGGCCTGTGGCCGCTaGTTGTGCTGTGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGVACGR*LCCVWF
Trigger: AAACCAGACACAGCACAAGCAGCGGCCACAGGCCAC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGGCCACGGCCCCTTCTaGCTCTTTCTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGGHGPF*LFLFLF
Trigger: GAAGAGGAACAGAAAGAGGCAGAAGGGGCCGTGGCC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCCCCCACTCCTCTGTTaGAGTCCTCCATGCACTCGT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGPPLLC*SPPCTR
Trigger: ACGAGTGCATGGAGGACTGCAACAGAGGAGTGGGGG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGDHWGR*RDCAGC
Trigger: ACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGACTCTCGTCCACGGCTaGCACCTCTCCCCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQTLVHG*HLSPVL
Trigger: CAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGACAGCAGGCCCATACTaGAAGGTGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQTAGPY*KVLGRP
Trigger: GGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTCTGCGGGATGGAGCTaGTCTGGCTACGTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQSAGWS*SGYVAR
Trigger: GCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCAGAAAGGACAGGCTCTaGCCCAAACTGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGRKDRL*PKLQCP
Trigger: GGGGCATTGCAGTTTGGGTCAGAGCCTGTCCTTTCT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGACTGGAGGAGACACTaGCCACTGGGGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWDWRRH*PLGEVQ
Trigger: CTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGLRMLS*QLSQGL
Trigger: CAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACT +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLSPPSW*PTTSPT
Trigger: AGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPTSPPS*WPTTSP
Trigger: CGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGT...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGETSPPS*WPTTSP
Trigger: CGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTGGGGTGATGAAGAGATaGAGCTGGGGTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPGVMKR*SWGTAE
Trigger: CTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCC...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTTGTGGCCGGGGCTaGGGAGGAGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVGCGRG*GGGIPT
Trigger: CGTGGGGATGCCTCCTCCCCAGCCCCGGCCACAACC...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTATCCACTCGGCTGTTaGAAAGGGGTGGCCGATGCA +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGYPLGC*KGVADA
Trigger: TGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTGTAGGCAGACTTGTTaGTCTGGGGCTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGCRQTC*SGASAG
Trigger: TCCCGCAGAAGCCCCAGACCAACAAGTCTGCCTACA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGGCTGATATATGTTTaGGGGTCCCACCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGLIYV*GSHLPA
Trigger: GGCGGGGAGGTGGGACCCCCAAACATATATCAGCCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGCAGTCTCCTCCACACTaGCACCCCGGGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKQSPPH*HPGPRR
Trigger: GCGGCGCGGCCCGGGGTGTCAGTGTGGAGGAGACTG...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613315.4
CDS-3UTR TCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGAGDFS*RNTSIM
Trigger: CATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCACTTGGAGCCTGGCTTaGAGAGGCGCTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQATWSLA*RGARGG
Trigger: CCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGT...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHCCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACGGGCTGAAGGCAAGTTaGAGGAAGCAGCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHGLKAS*RKQQEY
Trigger: GTACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCC...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTGTGTGGTCTGTAACTaGGTGGCCTGCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGCVVCN*VACTEL
Trigger: CAGTTCTGTGCAGGCCACGCAGTTACAGACCACACA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHTSPPS*WPTTSP
Trigger: CGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGT...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHMKRWS*GTAESV
Trigger: CACAGACTCGGCGGTACCCCAGCTCCATCTCTTCAT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGTGCTGGAGGAAGAATaGAGATTCGCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGVLEEE*RFASLS
Trigger: GGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCAC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGGTTGTGGCCGGGGCTaGGGAGGAGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDGCGRG*GGGIPT
Trigger: CGTGGGGATGCCTCCTCCCCAGCCCCGGCCACAACC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATACATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: LFHCLQGPARGGPVGTVIHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTCACAGCCCCCAGCCTTaGGCCAAATTAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPHSPQP*AKLALS
Trigger: GCTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTG...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGAGCCCTCTCAGAAGATaGGACCGGGAGAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQSPLRR*DREKRV
Trigger: GACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAACTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDNSPPS*WPTTSP
Trigger: CGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGTT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613315.4
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACGCCAGAGAAGGAGCCTaGGACGGATCCAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHAREGA*DGSRLD
Trigger: ATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGC...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGGCTTGGGCAGTCTTaGATTGCTCCAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGLGQS*IAPRTG
Trigger: CCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTGGTAGCCACTGCAGGTaGCTTCTCCTGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPGSHCR*LLLKEH
Trigger: GTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACC...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACAGCTGTGGCCGGATTaGTGGGGCCCCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEQLWPD*WGPHFL
Trigger: TAGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTTAGGGCTGTTGGGCTaGTATATGTTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHLGLLG*YMFGGP
Trigger: GGGACCCCCAAACATATATCAGCCCAACAGCCCTAA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGTGGCCTGTGGCCGCTaGTTGTGCTGTGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWVACGR*LCCVWF
Trigger: AAACCAGACACAGCACAAGCAGCGGCCACAGGCCAC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGEWMSK*AQKMLM
Trigger: CATCAACATCTTCTGGGCGCACTTCGACATCCACTC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTGGCCACCATCCTTCTaGCCTGAGACTCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQWPPSF*PETPFF
Trigger: GAAGAAGGGAGTCTCAGGCCAGAAGGATGGTGGCCA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACT +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTSPPSW*PTTSPT
Trigger: AGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGA...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHSPPSW*PTTSPT
Trigger: AGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAAT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHLKRRS*WGWTHN
Trigger: ATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTTGTGTGCAAAAGAGTaGATGTCGAAGTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGLCAKE*MSKCAQ
Trigger: CTGGGCGCACTTCGACATCCACTCTTTTGCACACAA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATCATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAGCAGGCCCATACTaGAAGGTGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDTAGPY*KVLGRP
Trigger: GGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTATCCACTCGGCTGTTaGAAAGGGGTGGCCGATGCA +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQYPLGC*KGVADA
Trigger: TGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACATCATACTGCACCAGTaGTGGGGATTGTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHIILHQ*WGLCRR
Trigger: TCGACGACACAATCCCCATCACTGGTGCAGTATGAT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGGTAGCCACTGCAGGTaGCTTCTCCTGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWGSHCR*LLLKEH
Trigger: GTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAACTTGGAGCCTGGCTTaGAGAGGCGCTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGTWSLA*RGARGG
Trigger: CCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGT...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAGACTGGAGGAGACACTaGCCACTGGGGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGDWRRH*PLGEVQ
Trigger: CTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTC...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAGACTGGAGGAGACACTaGCCACTGGGGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTDWRRH*PLGEVQ
Trigger: CTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTC...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGACTGGAGGAGACACTaGCCACTGGGGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHDWRRH*PLGEVQ
Trigger: CTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCACGGCCGAACTTTGTaGGGTCACCAGAATAAGGGT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQHGRTL*GHQNKG
Trigger: ACCCTTATTCTGGTGACCTCACAAAGTTCGGCCGTG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCCGTGTTACTGGAGGTaGCTGAAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHPCYWR*LKHQCC
Trigger: ACAACACTGGTGTTTCAGTCACCTCCAGTAACACGG...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTCCAATCCATTTTCCTaGCCTCGAAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGSNPFS*PRNSRP
Trigger: TGGACGAGAGTTTCGAGGTCAGGAAAATGGATTGGA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGTGGCCTGTGGCCGCTaGTTGTGCTGTGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLVACGR*LCCVWF
Trigger: AAACCAGACACAGCACAAGCAGCGGCCACAGGCCAC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACAAGTCTAATTTGTTCTaGAGTGGCCTGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHKSNLF*SGLWPL
Trigger: CAGCGGCCACAGGCCACTGCAGAACAAATTAGACTT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHALHSW*HPIHFP
Trigger: AGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGC...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGGCCACGGCCCCTTCTaGCTCTTTCTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPGHGPF*LFLFLF
Trigger: GAAGAGGAACAGAAAGAGGCAGAAGGGGCCGTGGCC...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCGGCCACGGCCCCTTCTaGCTCTTTCTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAGHGPF*LFLFLF
Trigger: GAAGAGGAACAGAAAGAGGCAGAAGGGGCCGTGGCC...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTGAGCCGATGTGGATTTaGTTGGCAGAGGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPEPMWI*LAEEKT
Trigger: CGTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTC...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQADHWGR*RDCAGC
Trigger: ACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTC...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCTTCTGCAGTGGCCTGTaGCCGCTGCTTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAFCSGL*PLLVLC
Trigger: ACACAGCACAAGCAGCGGCCACAGGCCACTGCAGAA...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGTGGCCACCATCCTTCTaGCCTGAGACTCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWWPPSF*PETPFF
Trigger: GAAGAAGGGAGTCTCAGGCCAGAAGGATGGTGGCCA...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTACTCTCGTCCACGGCTaGCACCTCTCCCCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVTLVHG*HLSPVL
Trigger: CAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAACTCTCGTCCACGGCTaGCACCTCTCCCCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTTLVHG*HLSPVL
Trigger: CAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTCCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPPKRRW*CFQTEN
Trigger: ATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGG...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTTCTGTGGAGCCGATGTaGATTTGCTTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPSVEPM*ICLAEE
Trigger: CTCCTCTGCCAAGCAAATCCACATCGGCTCCACAGA...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWKRRSW*GWTHNQ
Trigger: CTGATTATGAGTCCACCCCCACCACGAGCGCCTCTT...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCACCGCCGAGTCTGTGTaGATCTCTGTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGTAESV*ISVHKE
Trigger: CTCTTTATGAACAGAGATCCACACAGACTCGGCGGT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGGGGTGATGAAGAGATaGAGCTGGGGTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEGVMKR*SWGTAE
Trigger: CTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCTTCAACAGATTGTGTaGTCTGTAACTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGLQQIV*SVTAWP
Trigger: AGGCCACGCAGTTACAGACCACACAATCTGTTGAAG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGAGAACCCGAGATATCTaGCACGCCCGTGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQRTRDI*HARVTG
Trigger: TCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGGGATGGAGCTGGTCTaGCTACGTTGCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDGMELV*LRCPLP
Trigger: GGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGGGGCTTCTGCGGGATaGAGCTGGTCTGGCTACGTT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEGASAG*SWSGYV
Trigger: AACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGCCGCCCCTGTCACGTaGTATAAGATTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLAAPVT*YKIPSS
Trigger: GGAAGAGGGAATCTTATATCACGTGACAGGGGCGGC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613315.4
CDS-3UTR TCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTTTCTCTGACCAGCAGTaGTTGTCACATTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPFSDQQ*LSHSPQ
Trigger: CTGCGGAGAATGTGACAATCACTGCTGGTCAGAGAA...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTG +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWRGLVV*RSRRHL
Trigger: CAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCT...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACGTTACTGGAGGTGACTaGAACACCAGTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHVTGGD*NTSVVS
Trigger: GGATACAACACTGGTGTTTCAGTCACCTCCAGTAAC...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCCGTGTTACTGGAGGTaGCTGAAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQPCYWR*LKHQCC
Trigger: ACAACACTGGTGTTTCAGTCACCTCCAGTAACACGG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGTCCAATCCATTTTCCTaGCCTCGAACTCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWSNPFS*PRTLPR
Trigger: ACGGGGGAGAGTTCGAGGTCAGGAAAATGGATTGGA...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTGGGCAGTCTTGAATTaGTCCAAGAACTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQWAVLN*SKNWEP
Trigger: AGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTTTGTAAAGGGGCTGTaGACTGCTGAATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHFVKGL*TAESLG
Trigger: CCCAAGTGATTCAGCAGTGCACAGCCCCTTTACAAA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEDHWGR*RDCAGC
Trigger: ACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCCACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCCCGTCTGCTCCTCCTaGTGGCGCTGGCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDPVCSS*WRWQQR
Trigger: TCTCTGTTGCCAGCGCCAGCAGGAGGAGCAGACGGG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGTSPPS*WPTTSP
Trigger: CGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHKALHS*CHPIHF
Trigger: AAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGAATTGCTCCAAGAACTaGGAGCCTGTAGTACTGCCG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQNCSKN*EPVVLP
Trigger: CGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAGGCTACTTGGAGCCTaGCTTGAAGAGGCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDRLLGA*LEEALV
Trigger: CACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGATTCACTGGCCGTGCTaGTATACAGGCTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQIHWPC*YTGYLE
Trigger: CTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAAT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTATTCACTGGCCGTGCTaGTATACAGGCTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPIHWPC*YTGYLE
Trigger: CTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAAT...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPMKRWS*GTAESV
Trigger: CACAGACTCGGCGGTACCCCAGCTCCATCTCTTCAT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTTTGTGTGCAAAAGAGTaGATGTCGAAGTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPLCAKE*MSKCAQ
Trigger: CTGGGCGCACTTCGACATCCACTCTTTTGCACACAA...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTCTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTTGTGGCCGGGGCTaGGGAGGAGGCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRGCGRG*GGGIPT
Trigger: CGTGGGGATGCCTCCTCCCCAGCCCCGGCCACAACC...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACACAGCAGGCCCATACTaGAAGGTGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDTAGPY*KVLGRP
Trigger: GGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTATCCACTCGGCTGTTaGAAAGGGGTGGCCGATGCA +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLYPLGC*KGVADA
Trigger: TGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGCAGACTTGTTGGTCTaGGGCTTCTGCGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEADLLV*GFCGME
Trigger: CTCCATCCCGCAGAAGCCCCAGACCAACAAGTCTGC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGCAAGGTCAATTCTCTaGCCAGCAGTGATTGTCACA +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQARSIL*PAVIVT
Trigger: TGTGACAATCACTGCTGGTCAGAGAATTGACCTTGC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCGCCAGAGAAGGAGCCTaGGACGGATCCAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAAREGA*DGSRLD
Trigger: ATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGC...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATCTGCTTCGAATTACTaGACACCAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPSASNY*TPEAGP
Trigger: TGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGA...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACAGAAAGGACAGGCTCTaGCCCAAACTGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRKDRL*PKLQCP
Trigger: GGGGCATTGCAGTTTGGGTCAGAGCCTGTCCTTTCT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAGAAAGGACAGGCTCTaGCCCAAACTGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDRKDRL*PKLQCP
Trigger: GGGGCATTGCAGTTTGGGTCAGAGCCTGTCCTTTCT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGACTTGGAGCCTGGCTTaGAGAGGCGCTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKTWSLA*RGARGG
Trigger: CCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGT...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDCCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCCCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATCAGCTGTGGCCGGATTaGTGGGGCCCCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDQLWPD*WGPHFL
Trigger: TAGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTG...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCAGCTGTGGCCGGATTaGTGGGGCCCCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITQLWPD*WGPHFL
Trigger: TAGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTG...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTTCCAATCCATTTTCCTaGCCTCGAAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPSNPFS*PRNSRP
Trigger: TGGACGAGAGTTTCGAGGTCAGGAAAATGGATTGGA...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS-3UTR TCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGCAGGTGTGTGCATTaGTGCTTCGAAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQASRCVH*CFEGAA
Trigger: TGCAGCACCTTCGAAGCATCAATGCACACACCTGCT...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWALHSW*HPIHFP
Trigger: AGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACCCCCACTCCTCTGTTaGAGTCCTCCATGCACTCGT +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTPPLLC*SPPCTR
Trigger: ACGAGTGCATGGAGGACTGCAACAGAGGAGTGGGGG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCATCCTTTCCCTAACATaGTCACCATACTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGILSLT*SPYCDE
Trigger: CTCATCACAGTATGGTGAGCATGTTAGGGAAAGGAT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTLRMLS*QLSQGL
Trigger: CAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAG...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTTTTGTAAAGGGGCTGTaGACTGCTGAATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPFVKGL*TAESLG
Trigger: CCCAAGTGATTCAGCAGTGCACAGCCCCTTTACAAA...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCGAGCCGATGTGGATTTaGTTGGCAGAGGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAEPMWI*LAEEKT
Trigger: CGTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTC...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACACTGAAGCCATTCTTTaGCTGAGTCAGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHTEAIL*LSQVLL
Trigger: CAAAAGGACCTGACTCAGGCAAAGAATGGCTTCAGT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWEWMSK*AQKMLM
Trigger: CATCAACATCTTCTGGGCGCACTTCGACATCCACTC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCCACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACCACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTTTCTGCAGTGGCCTGTaGCCGCTGCTTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVFCSGL*PLLVLC
Trigger: ACACAGCACAAGCAGCGGCCACAGGCCACTGCAGAA...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATTTCTGCAGTGGCCTGTaGCCGCTGCTTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHFCSGL*PLLVLC
Trigger: ACACAGCACAAGCAGCGGCCACAGGCCACTGCAGAA...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATGGCCACCATCCTTCTaGCCTGAGACTCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEWPPSF*PETPFF
Trigger: GAAGAAGGGAGTCTCAGGCCAGAAGGATGGTGGCCA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACATTCTCCATTGTAGATaGTGTCTTCCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHILHCR*CLPQQN
Trigger: GTTCTGCTGGGGAAGACACCATCTACAATGGAGAAT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACAAGCAGGCTGTGATATaGCAGTCTGCTTCGAATTAC +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHKQAVI*QSASNY
Trigger: GTAATTCGAAGCAGACTGCCATATCACAGCCTGCTT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLPKRRW*CFQTEN
Trigger: ATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGECPKRR*WCFQTE
Trigger: CTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDCPKRR*WCFQTE
Trigger: CTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTCTGTGGAGCCGATGTaGATTTGCTTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLSVEPM*ICLAEE
Trigger: CTCCTCTGCCAAGCAAATCCACATCGGCTCCACAGA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAAGGCTACTTGGAGCCTaGCTTGAAGAGGCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTRLLGA*LEEALV
Trigger: CACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGGTTGTCGACTGAATTaGGCCGCTCTGATAACCAGA +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWGCRLN*AALITR
Trigger: TCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTACCGCCGAGTCTGTGTaGATCTCTGTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPTAESV*ISVHKE
Trigger: CTCTTTATGAACAGAGATCCACACAGACTCGGCGGT...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCTTCAACAGATTGTGTaGTCTGTAACTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQLQQIV*SVTAWP
Trigger: AGGCCACGCAGTTACAGACCACACAATCTGTTGAAG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACGGAATCTCCTCACTGTaGCTCAAGCCACCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNGISSL*LKPPKE
Trigger: CTCCTTGGGTGGCTTGAGCCACAGTGAGGAGATTCC...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGTGCTGGAGGAAGAATaGAGATTCGCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPVLEEE*RFASLS
Trigger: GGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCAC...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCACATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGACAGCAGGCCCATACTaGAAGGTGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGTAGPY*KVLGRP
Trigger: GGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGT...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCACAGCAGGCCCATACTaGAAGGTGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPTAGPY*KVLGRP
Trigger: GGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGT...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTATCCACTCGGCTGTTaGAAAGGGGTGGCCGATGCA +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDYPLGC*KGVADA
Trigger: TGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATCACAGCCCCCAGCCTTaGGCCAAATTAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHHSPQP*AKLALS
Trigger: GCTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTG...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGGGATGGAGCTGGTCTaGCTACGTTGCCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLGMELV*LRCPLP
Trigger: GGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATGTAGGCAGACTTGTTaGTCTGGGGCTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGECRQTC*SGASAG
Trigger: TCCCGCAGAAGCCCCAGACCAACAAGTCTGCCTACA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGCATGAAGCTGAGGCATaGGGTGGGCCGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGHEAEA*GGPLGV
Trigger: CACCCCCAGCGGCCCACCCCATGCCTCAGCTTCATG...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACATACATACAACAGGGTaGGGATGGTATAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHIHTTG*GWYRNG
Trigger: CCCATTCCTATACCATCCCCACCCTGTTGTATGTAT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGGGCTGATATATGTTTaGGGGTCCCACCTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDGLIYV*GSHLPA
Trigger: GGCGGGGAGGTGGGACCCCCAAACATATATCAGCCC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAGCCGCCCCTGTCACGTaGTATAAGATTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGAAPVT*YKIPSS
Trigger: GGAAGAGGGAATCTTATATCACGTGACAGGGGCGGC...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGAAGGTTCCCATTCCTTaGGCAGAAAACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWKVPIP*AENLPP
Trigger: AGGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTT...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTTCTCTGACCAGCAGTaGTTGTCACATTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLFSDQQ*LSHSPQ
Trigger: CTGCGGAGAATGTGACAATCACTGCTGGTCAGAGAA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCGGATCCAGATTAGATaGATCATTCTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGRIQIR*IILHCR
Trigger: TCTACAATGGAGAATGATTCATCTAATCTGGATCCG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGCCAGAGAAGGAGCCTaGGACGGATCCAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEAREGA*DGSRLD
Trigger: ATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGGGGCTTGGGCAGTCTTaGATTGCTCCAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRGLGQS*IAPRTG
Trigger: CCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCC...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGGGCTTGGGCAGTCTTaGATTGCTCCAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHGLGQS*IAPRTG
Trigger: CCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEAGDFS*RNTSIM
Trigger: CATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDAGDFS*RNTSIM
Trigger: CATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGGTAGCCACTGCAGGTaGCTTCTCCTGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHGSHCR*LLLKEH
Trigger: GTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCAGAAAGGACAGGCTCTaGCCCAAACTGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTRKDRL*PKLQCP
Trigger: GGGGCATTGCAGTTTGGGTCAGAGCCTGTCCTTTCT...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATTGGCCTGCACAGAACTaGAGCCATTCTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNWPAQN*SHSLPE
Trigger: CTCAGGCAAAGAATGGCTTCAGTTCTGTGCAGGCCA...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTGGCCTGCACAGAACTaGAGCCATTCTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDWPAQN*SHSLPE
Trigger: CTCAGGCAAAGAATGGCTTCAGTTCTGTGCAGGCCA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGCCACCCAAGGAGGATaGATGCTGATTGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEATQGG*MLIGCR
Trigger: ACGACAACCAATCAGCATTCATCCTCCTTGGGTGGC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCAAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGTTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCTTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACCACGGCCGAACTTTGTaGGGTCACCAGAATAAGGGT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDHGRTL*GHQNKG
Trigger: ACCCTTATTCTGGTGACCTCACAAAGTTCGGCCGTG...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHCCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHCCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGGGCTGAAGGCAAGTTaGAGGAAGCAGCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHGLKAS*RKQQEY
Trigger: GTACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACCGCCTATCCGGGCTTTaGCTCCTTATTCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRLSGL*LLIPGV
Trigger: TACTCCTGGAATAAGGAGTCAAAGCCCGGATAGGCG...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATTAGGGCTGTTGGGCTaGTATATGTTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGELGLLG*YMFGGP
Trigger: GGGACCCCCAAACATATATCAGCCCAACAGCCCTAA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGTGGCCGCTGCTTGTaGTGTGTCTGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPCGRCL*CVWFWF
Trigger: AAACCAAAACCAGACACAGCACAAGCAGCGGCCACA...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTCCACGTATTGCCGCTaGTATTGCCATAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHSTYCR*YCHSYH
Trigger: ATGATAACTATGGCAATAGCAGCGGCAATACGTGGA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTGGGCAGTCTTGAATTaGTCCAAGAACTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLWAVLN*SKNWEP
Trigger: AGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTACTGAAGCCATTCTTTaGCTGAGTCAGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPTEAIL*LSQVLL
Trigger: CAAAAGGACCTGACTCAGGCAAAGAATGGCTTCAGT...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGACTGAAGCCATTCTTTaGCTGAGTCAGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQTEAIL*LSQVLL
Trigger: CAAAAGGACCTGACTCAGGCAAAGAATGGCTTCAGT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGCAACAGCAGGTGTGTaGATTGATGCTTCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLATAGV*IDASKV
Trigger: CACCTTCGAAGCATCAATGCACACACCTGCTGTTGC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCAAGTCAGCATCATTATaGTCCGAAATCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGKSASL*SEIICA
Trigger: TGCACAGATGATTTCGGACCATAATGATGCTGACTT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCCAGGAATGCGTGTCTaGGTTTCCTTCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLPGMRV*VSFQKN
Trigger: GTTCTTCTGGAAGGAAACCCAGACACGCATTCCTGG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATTCATTGGATTCCGTCTaGCCACCATCCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNSLDSV*PPSFWP
Trigger: AGGCCAGAAGGATGGTGGCCAGACGGAATCCAATGA...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTCATTGGATTCCGTCTaGCCACCATCCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNSLDSV*PPSFWP
Trigger: AGGCCAGAAGGATGGTGGCCAGACGGAATCCAATGA...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGATTCTCCATTGTAGATaGTGTCTTCCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQILHCR*CLPQQN
Trigger: GTTCTGCTGGGGAAGACACCATCTACAATGGAGAAT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAATTGCTCCAAGAACTaGGAGCCTGTAGTACTGCCG +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQANCSKN*EPVVLP
Trigger: CGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATT...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEPKRRW*CFQTEN
Trigger: ATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTATGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVCPKRR*WCFQTE
Trigger: CTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACA...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTCCAGGCGACATCTGTaGAGCCGATGTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNSRRHL*SRCGFA
Trigger: AGCAAATCCACATCGGCTCCACAGATGTCGCCTGGA...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACCGCTCGTGGTGGGGGTaGACTCATAATCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRSWWG*THNQKG
Trigger: TCCTTTCTGATTATGAGTCCACCCCCACCACGAGCG...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACGCTCGTGGTGGGGGTaGACTCATAATCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGERSWWG*THNQKG
Trigger: TCCTTTCTGATTATGAGTCCACCCCCACCACGAGCG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVKRRSW*GWTHNQ
Trigger: CTGATTATGAGTCCACCCCCACCACGAGCGCCTCTT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATATTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAAT +
Preference number: 4 (lower is better)
Translates to: LFHCLQGPARGGPVGTVILKRRS*WGWTHN
Trigger: ATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAA...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAAT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDLKRRS*WGWTHN
Trigger: ATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAAT +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNLKRRS*WGWTHN
Trigger: ATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAA...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAATTCACTGGCCGTGCTaGTATACAGGCTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPIHWPC*YTGYLE
Trigger: CTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAAT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVMKRWS*GTAESV
Trigger: CACAGACTCGGCGGTACCCCAGCTCCATCTCTTCAT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGGGGTGATGAAGAGATaGAGCTGGGGTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKGVMKR*SWGTAE
Trigger: CTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCC...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGGAATCTCCTCACTGTaGCTCAAGCCACCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHGISSL*LKPPKE
Trigger: CTCCTTGGGTGGCTTGAGCCACAGTGAGGAGATTCC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAGGAATCTCCTCACTGTaGCTCAAGCCACCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGGISSL*LKPPKE
Trigger: CTCCTTGGGTGGCTTGAGCCACAGTGAGGAGATTCC...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGTGCTGGAGGAAGAATaGAGATTCGCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEVLEEE*RFASLS
Trigger: GGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCAC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTACAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGTGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWDPCIV*QAGVTV
Trigger: TACAGTTACACCAGCCTGCCATACTATACAGGGGTC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGTATCCACTCGGCTGTTaGAAAGGGGTGGCCGATGCA +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRYPLGC*KGVADA
Trigger: TGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAAGAACCCGAGATATCTaGCACGCCCGTGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGERTRDI*HARVTG
Trigger: TCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTCTGCGGGATGGAGCTaGTCTGGCTACGTTGCCCGC +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGSAGWS*SGYVAR
Trigger: GCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATTCTCTGACCAGCAGTaGTTGTCACATTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEFSDQQ*LSHSPQ
Trigger: CTGCGGAGAATGTGACAATCACTGCTGGTCAGAGAA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTTCTGCTTCGAATTACTaGACACCAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVSASNY*TPEAGP
Trigger: TGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGA...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTATCTGCTTCGAATTACTaGACACCAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVSASNY*TPEAGP
Trigger: TGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGA...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAATCATACTGCACCAGTaGTGGGGATTGTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTIILHQ*WGLCRR
Trigger: TCGACGACACAATCCCCATCACTGGTGCAGTATGAT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATGGGGCTGTGCACTGCTaGATCACTTGGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHGAVHC*ITWVLQ
Trigger: TTGAAGAACCCAAGTGATTCAGCAGTGCACAGCCCC...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGGGGCTGTGCACTGCTaGATCACTTGGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHGAVHC*ITWVLQ
Trigger: TTGAAGAACCCAAGTGATTCAGCAGTGCACAGCCCC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVAGDFS*RNTSIM
Trigger: CATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGC...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTG +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHRGLVV*RSRRHL
Trigger: CAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCT...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHRGLVV*RSRRHL
Trigger: CAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAAAGCCATTCTTTGCCTaGGTCAGGTCCTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEKPFFA*VRSFWG
Trigger: ACCCCAAAAGGACCTGACTCAGGCAAAGAATGGCTT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWKEDEC*LVVVSK
Trigger: CTTACTGACGACAACCAATCAGCATTCATCCTCCTT...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCGCCACCCAAGGAGGATaGATGCTGATTGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTATQGG*MLIGCR
Trigger: ACGACAACCAATCAGCATTCATCCTCCTTGGGTGGC...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGACTGGAGGAGACACTaGCCACTGGGGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRDWRRH*PLGEVQ
Trigger: CTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTC...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTCACGGCCGAACTTTGTaGGGTCACCAGAATAAGGGT +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVHGRTL*GHQNKG
Trigger: ACCCTTATTCTGGTGACCTCACAAAGTTCGGCCGTG...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATCCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTTGCCTTCACTTGGGCTGAAGGCAAGTTaGAGGAAGCAGCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: PHPTPRFSSARRYMLPSLGLKAS*RKQQEY
Trigger: GTACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCC...AAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCGTCTCAGCTCCTTCTTaGTCCTCTCCATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPVSAPS*SSPFST
Trigger: GGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGAC...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATAGCAGGTGTGTGCATTaGTGCTTCGAAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHSRCVH*CFEGAA
Trigger: TGCAGCACCTTCGAAGCATCAATGCACACACCTGCT...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGTACACCACCAGGGTaGACAGGAGGAAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDRTPPG*TGGSKG
Trigger: TCCTTTGCTTCCTCCTGTTCACCCTGGTGGTGTACG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGTGGCCTGTGGCCGCTaGTTGTGCTGTGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPVACGR*LCCVWF
Trigger: AAACCAGACACAGCACAAGCAGCGGCCACAGGCCAC...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACAAGTCTAATTTGTTCTaGAGTGGCCTGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNKSNLF*SGLWPL
Trigger: CAGCGGCCACAGGCCACTGCAGAACAAATTAGACTT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAGTCTAATTTGTTCTaGAGTGGCCTGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDKSNLF*SGLWPL
Trigger: CAGCGGCCACAGGCCACTGCAGAACAAATTAGACTT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATCCCCCACTCCTCTGTTaGAGTCCTCCATGCACTCGT +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNPPLLC*SPPCTR
Trigger: ACGAGTGCATGGAGGACTGCAACAGAGGAGTGGGGG...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTTGCCTTCACTTCTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PHPTPRFSSARRYMLPSLLRMLS*QLSQGL
Trigger: CAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAG...AAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDLRMLS*QLSQGL
Trigger: CAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCAAGAGGAGGTGGTGGTaGTTCCAGACTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPKRRWW*FQTENA
Trigger: AGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTT...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAGAGGAGGTGGTGGTaGTTCCAGACTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDKRRWW*FQTENA
Trigger: AGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTTCTTCAAATCATACTaGACCAGTGATGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHFFKSY*TSDGDC
Trigger: ACAATCCCCATCACTGGTGCAGTATGATTTGAAGAA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGAGCCGATGTGGATTTaGTTGGCAGAGGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHEPMWI*LAEEKT
Trigger: CGTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTGTGTGGTCTGTAACTaGGTGGCCTGCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHCVVCN*VACTEL
Trigger: CAGTTCTGTGCAGGCCACGCAGTTACAGACCACACA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTATGTGTGGTCTGTAACTaGGTGGCCTGCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVCVVCN*VACTEL
Trigger: CAGTTCTGTGCAGGCCACGCAGTTACAGACCACACA...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDEWMSK*AQKMLM
Trigger: CATCAACATCTTCTGGGCGCACTTCGACATCCACTC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPDHWGR*RDCAGC
Trigger: ACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTC...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGAHTGR*WGGPGP
Trigger: GGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCCTGACATTCACACCATaGTGCTTGGAAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQALTFTP*CLEEVG
Trigger: TCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAG...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGCAACAGCAGGTGTGTaGATTGATGCTTCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDATAGV*IDASKV
Trigger: CACCTTCGAAGCATCAATGCACACACCTGCTGTTGC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACAATTGCTCCAAGAACTaGGAGCCTGTAGTACTGCCG +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNNCSKN*EPVVLP
Trigger: CGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATCCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHPKRRW*CFQTEN
Trigger: ATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGG...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGATCTGTGGAGCCGATGTaGATTTGCTTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGSVEPM*ICLAEE
Trigger: CTCCTCTGCCAAGCAAATCCACATCGGCTCCACAGA...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATTCCAGGCGACATCTGTaGAGCCGATGTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHSRRHL*SRCGFA
Trigger: AGCAAATCCACATCGGCTCCACAGATGTCGCCTGGA...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTCCAGGCGACATCTGTaGAGCCGATGTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHSRRHL*SRCGFA
Trigger: AGCAAATCCACATCGGCTCCACAGATGTCGCCTGGA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTCGCTCGTGGTGGGGGTaGACTCATAATCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVRSWWG*THNQKG
Trigger: TCCTTTCTGATTATGAGTCCACCCCCACCACGAGCG...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAAGGCTACTTGGAGCCTaGCTTGAAGAGGCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGRLLGA*LEEALV
Trigger: CACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCT...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGAGGATGAATGCTGATTaGTTGTCGTCAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQRMNAD*LSSVRK
Trigger: CTTCCTTACTGACGACAACCAATCAGCATTCATCCT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTGTGCAAAAGAGTaGATGTCGAAGTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNLCAKE*MSKCAQ
Trigger: CTGGGCGCACTTCGACATCCACTCTTTTGCACACAA...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATTGGTTCTGTTGGGGTTaGGCCAAGGTTGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYWFCWG*AKVVAG
Trigger: CCCGGCCACAACCTTGGCCCAACCCCAACAGAACCA...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTTGCCTTCACTTTATCCACTCGGCTGTTaGAAAGGGGTGGCCGATGCA +
Preference number: 4 (lower is better)
Translates to: PHPTPRFSSARRYMLPSLYPLGC*KGVADA
Trigger: TGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATA...AAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTAGAACCCGAGATATCTaGCACGCCCGTGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVRTRDI*HARVTG
Trigger: TCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTGTAGGCAGACTTGTTaGTCTGGGGCTTCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDCRQTC*SGASAG
Trigger: TCCCGCAGAAGCCCCAGACCAACAAGTCTGCCTACA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAACAACAGGGTGGGGATaGTATAGGAATGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGETTGWG*YRNGTD
Trigger: GTCTGTCCCATTCCTATACCATCCCCACCCTGTTGT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAAGGTTCCCATTCCTTaGGCAGAAAACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTKVPIP*AENLPP
Trigger: AGGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGCAAGGTCAATTCTCTaGCCAGCAGTGATTGTCACA +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDARSIL*PAVIVT
Trigger: TGTGACAATCACTGCTGGTCAGAGAATTGACCTTGC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGGGCTTGGGCAGTCTTaGATTGCTCCAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKGLGQS*IAPRTG
Trigger: CCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCC...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGATCATACTGCACCAGTaGTGGGGATTGTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRIILHQ*WGLCRR
Trigger: TCGACGACACAATCCCCATCACTGGTGCAGTATGAT...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAATCATACTGCACCAGTaGTGGGGATTGTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTIILHQ*WGLCRR
Trigger: TCGACGACACAATCCCCATCACTGGTGCAGTATGAT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGGGGCTGTGCACTGCTaGATCACTTGGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDGAVHC*ITWVLQ
Trigger: TTGAAGAACCCAAGTGATTCAGCAGTGCACAGCCCC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAAGCCATTCTTTGCCTaGGTCAGGTCCTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVKPFFA*VRSFWG
Trigger: ACCCCAAAAGGACCTGACTCAGGCAAAGAATGGCTT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPKEDEC*LVVVSK
Trigger: CTTACTGACGACAACCAATCAGCATTCATCCTCCTT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGTTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGCCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGGTCTCAGCTCCTTCTTaGTCCTCTCCATTTTCCACC +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRVSAPS*SSPFST
Trigger: GGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGAC...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCAGTGGTCTGGTTTCTaGAACAAGACTTCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLQWSGF*NKTSVQ
Trigger: TTGCACTGAAGTCTTGTTTCAGAAACCAGACCACTG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTGTGGCCGCTGCTTGTaGTGTGTCTGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHCGRCL*CVWFWF
Trigger: AAACCAAAACCAGACACAGCACAAGCAGCGGCCACA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGTGGCCTGTGGCCGCTaGTTGTGCTGTGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEVACGR*LCCVWF
Trigger: AAACCAGACACAGCACAAGCAGCGGCCACAGGCCAC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHALHSW*HPIHFP
Trigger: AGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGGCCACGGCCCCTTCTaGCTCTTTCTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLGHGPF*LFLFLF
Trigger: GAAGAGGAACAGAAAGAGGCAGAAGGGGCCGTGGCC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGCCCCCACTCCTCTGTTaGAGTCCTCCATGCACTCGT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGPPLLC*SPPCTR
Trigger: ACGAGTGCATGGAGGACTGCAACAGAGGAGTGGGGG...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGTGTGATATGGCAGTCTaGTTCGAATTACTGAACACC +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWCDMAV*FELLNT
Trigger: GGTGTTCAGTAATTCGAAGCAGACTGCCATATCACA...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGCTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKLRMLS*QLSQGL
Trigger: CAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAG...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTTTGTAAAGGGGCTGTaGACTGCTGAATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDFVKGL*TAESLG
Trigger: CCCAAGTGATTCAGCAGTGCACAGCCCCTTTACAAA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTGCAATGCCCCAAACTaGAGGTTTAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDCNAPN*RFSPEI
Trigger: TATCTCAGGGCTAAACCTGCAGTTTGGGGCATTGCA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATGCAATGCCCCAAACTaGAGGTTTAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGECNAPN*RFSPEI
Trigger: TATCTCAGGGCTAAACCTGCAGTTTGGGGCATTGCA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATGCAATGCCCCAAACTaGAGGTTTAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTCNAPN*RFSPEI
Trigger: TATCTCAGGGCTAAACCTGCAGTTTGGGGCATTGCA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAATGATTCACTGGCCGTaGTGGTATACAGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEMIHWP*WYTGYL
Trigger: CAAGTAGCCTGTATACCAGCACGGCCAGTGAATCAT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEERVFC*VDNVLL
Trigger: CAGCAGCACGTTATCTACGCAGCAGAATACCCTTTC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGATGAAAGGGTATTCTaGTGCGTAGATAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLDERVF*CVDNVL
Trigger: CAGCACGTTATCTACGCAGCAGAATACCCTTTCATC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGEWMSK*AQKMLM
Trigger: CATCAACATCTTCTGGGCGCACTTCGACATCCACTC...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGCACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCCCTCTCCCTTTACTaGCTGAAATCGGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPSLSLY*LKSAVD
Trigger: ATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGA...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTACAAGGTAGAATACTaGGCCTATCCGGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDYKVEY*AYPGFD
Trigger: GTCAAAGCCCGGATAGGCGCAGTATTCTACCTTGTA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCTGGTCTGGCTACGTTaGCCGCTGCCCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGLVWLR*PLPVWP
Trigger: TGGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCTGGTCTGGCTACGTTaGCCGCTGCCCGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGLVWLR*PLPVCS
Trigger: GGAGCAGACGGGCAGCGGGCAACGTAGCCAGACCAG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTTCTGCAGTGGCCTGTaGCCGCTGCTTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGFCSGL*PLLVLC
Trigger: ACACAGCACAAGCAGCGGCCACAGGCCACTGCAGAA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGAAGTCAGCATCATTATaGTCCGAAATCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQKSASL*SEIICA
Trigger: TGCACAGATGATTTCGGACCATAATGATGCTGACTT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATCCAGGAATGCGTGTCTaGGTTTCCTTCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHPGMRV*VSFQKN
Trigger: GTTCTTCTGGAAGGAAACCCAGACACGCATTCCTGG...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACCAGGAATGCGTGTCTaGGTTTCCTTCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTPGMRV*VSFQKN
Trigger: GTTCTTCTGGAAGGAAACCCAGACACGCATTCCTGG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDKALHS*CHPIHF
Trigger: AAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAATCATCAGTATTGGCTaGCTCTGCATAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPIISIG*LCIISW
Trigger: CCAGCTGATTATGCAGAGCCAGCCAATACTGATGAT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATCATCTGGTTCAAAGTaGCCAGTGTTGTTCCACGTA +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPSSGSK*PVLFHV
Trigger: TACGTGGAACAACACTGGCCACTTTGAACCAGATGA...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAACTCGTCCCATCATCTaGTTCAAAGTGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTTRPII*FKVASV
Trigger: AACACTGGCCACTTTGAACCAGATGATGGGACGAGT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGATTCTCCATTGTAGATaGTGTCTTCCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLILHCR*CLPQQN
Trigger: GTTCTGCTGGGGAAGACACCATCTACAATGGAGAAT...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAAAGCAGGCTGTGATATaGCAGTCTGCTTCGAATTAC +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPKQAVI*QSASNY
Trigger: GTAATTCGAAGCAGACTGCCATATCACAGCCTGCTT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAGCAGGCTGTGATATaGCAGTCTGCTTCGAATTAC +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLKQAVI*QSASNY
Trigger: GTAATTCGAAGCAGACTGCCATATCACAGCCTGCTT...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTCTGTGGAGCCGATGTaGATTTGCTTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDSVEPM*ICLAEE
Trigger: CTCCTCTGCCAAGCAAATCCACATCGGCTCCACAGA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKKRRSW*GWTHNQ
Trigger: CTGATTATGAGTCCACCCCCACCACGAGCGCCTCTT...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAAT +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDLKRRS*WGWTHN
Trigger: ATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAGGCTACTTGGAGCCTaGCTTGAAGAGGCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGRLLGA*LEEALV
Trigger: CACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCTACTTGGAGCCTaGCTTGAAGAGGCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLRLLGA*LEEALV
Trigger: CACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGATTCACTGGCCGTGCTaGTATACAGGCTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRIHWPC*YTGYLE
Trigger: CTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAAT...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAGGTTGTCGACTGAATTaGGCCGCTCTGATAACCAGA +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTGCRLN*AALITR
Trigger: TCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACC...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGMKRWS*GTAESV
Trigger: CACAGACTCGGCGGTACCCCAGCTCCATCTCTTCAT...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGGGTGATGAAGAGATaGAGCTGGGGTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRGVMKR*SWGTAE
Trigger: CTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCC...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACCTTCAACAGATTGTGTaGTCTGTAACTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDLQQIV*SVTAWP
Trigger: AGGCCACGCAGTTACAGACCACACAATCTGTTGAAG...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAGGAATCTCCTCACTGTaGCTCAAGCCACCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGGISSL*LKPPKE
Trigger: CTCCTTGGGTGGCTTGAGCCACAGTGAGGAGATTCC...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGATTGTGTGCAAAAGAGTaGATGTCGAAGTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGLCAKE*MSKCAQ
Trigger: CTGGGCGCACTTCGACATCCACTCTTTTGCACACAA...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATCTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGACAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCATACTGGAAGGTGCTaGGGAGGCCCGGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGHTGRC*GGPGPL
Trigger: CAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAGGACTGCTGGGTTTTaGAGTACACAGAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHRTAGF*STQNPR
Trigger: TCTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGCAGACTTGTTGGTCTaGGGCTTCTGCGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLADLLV*GFCGME
Trigger: CTCCATCCCGCAGAAGCCCCAGACCAACAAGTCTGC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCATGAAGCTGAGGCATaGGGTGGGCCGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGHEAEA*GGPLGV
Trigger: CACCCCCAGCGGCCCACCCCATGCCTCAGCTTCATG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATACAACAGGGTGGGGATaGTATAGGAATGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHTTGWG*YRNGTD
Trigger: GTCTGTCCCATTCCTATACCATCCCCACCCTGTTGT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGTCTGCTCCTCCTGCTaGCGCTGGCAACAGAGAATC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLVCSSC*RWQQRI
Trigger: GATTCTCTGTTGCCAGCGCCAGCAGGAGGAGCAGAC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428595.1
3UTR CAA 72 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTaGAACTTGAAATGGGTAAGACAGGGTCAGACACAT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHR*NLKWVRQGQTH
Trigger: ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGTCTGGTTTTGGTTTTaGGGTTGTTCCCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVVWFWF*GCSQFP
Trigger: GGGAAACTGGGAACAACCTCAAAACCAAAACCAGAC...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAAAGGTTCCCATTCCTTaGGCAGAAAACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGKVPIP*AENLPP
Trigger: AGGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTT...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAAGGTTCCCATTCCTTaGGCAGAAAACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHKVPIP*AENLPP
Trigger: AGGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTTGCCTTCACTTTTCTCTGACCAGCAGTaGTTGTCACATTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PHPTPRFSSARRYMLPSLFSDQQ*LSHSPQ
Trigger: CTGCGGAGAATGTGACAATCACTGCTGGTCAGAGAA...AAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAGCAAGGTCAATTCTCTaGCCAGCAGTGATTGTCACA +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGARSIL*PAVIVT
Trigger: TGTGACAATCACTGCTGGTCAGAGAATTGACCTTGC...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATGCAAGGTCAATTCTCTaGCCAGCAGTGATTGTCACA +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHARSIL*PAVIVT
Trigger: TGTGACAATCACTGCTGGTCAGAGAATTGACCTTGC...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGGGGCTGTGCACTGCTaGATCACTTGGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKGAVHC*ITWVLQ
Trigger: TTGAAGAACCCAAGTGATTCAGCAGTGCACAGCCCC...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPAGDFS*RNTSIM
Trigger: CATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGC...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGGTAGCCACTGCAGGTaGCTTCTCCTGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLGSHCR*LLLKEH
Trigger: GTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAGAAAGGACAGGCTCTaGCCCAAACTGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGRKDRL*PKLQCP
Trigger: GGGGCATTGCAGTTTGGGTCAGAGCCTGTCCTTTCT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACAAGCCATTCTTTGCCTaGGTCAGGTCCTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDKPFFA*VRSFWG
Trigger: ACCCCAAAAGGACCTGACTCAGGCAAAGAATGGCTT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGACTGGAGGAGACACTaGCCACTGGGGGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGDWRRH*PLGEVQ
Trigger: CTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAGTTGCTGCCTAGGCTaGGGCCCAGGCTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGSCCLG*GPGYCH
Trigger: GTGGCAGTAGCCTGGGCCTCAGCCTAGGCAGCAACT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGTTCGAGTCGAGGCTGTaGCAGTGGAGTTGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLFESRL*QWSCCL
Trigger: TAGGCAGCAACTCCACTGTCACAGCCTCGACTCGAA...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLECCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCGTTACTGGAGGTGACTaGAACACCAGTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTVTGGD*NTSVVS
Trigger: GGATACAACACTGGTGTTTCAGTCACCTCCAGTAAC...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp CCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTTGCCTTCACTTCCGTGTTACTGGAGGTaGCTGAAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHPTPRFSSARRYMLPSLPCYWR*LKHQCC
Trigger: ACAACACTGGTGTTTCAGTCACCTCCAGTAACACGG...AAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCAGCTGTGGCCGGATTaGTGGGGCCCCCACTTCCTA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGQLWPD*WGPHFL
Trigger: TAGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAGGTCATCGACGAAATTaGGGATGTCCTGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGGHRRN*GCPGHP
Trigger: AGGATGGCCAGGACATCCTCAATTTCGTCGATGACC...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATGGTCATCGACGAAATTaGGGATGTCCTGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDGHRRN*GCPGHP
Trigger: AGGATGGCCAGGACATCCTCAATTTCGTCGATGACC...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTGTGGCCGCTGCTTGTaGTGTGTCTGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDCGRCL*CVWFWF
Trigger: AAACCAAAACCAGACACAGCACAAGCAGCGGCCACA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGTCTCCATTGCAGTCATaGAAAGCAATCACACATTCA +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWSPLQS*KAITHS
Trigger: TGAATGTGTGATTGCTTTGCATGACTGCAATGGAGA...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGCCACGGCCCCTTCTaGCTCTTTCTGTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRGHGPF*LFLFLF
Trigger: GAAGAGGAACAGAAAGAGGCAGAAGGGGCCGTGGCC...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPSIGWL*IISWVK
Trigger: TTTAACCCAGCTGATTATGCAGAGCCAGCCAATACT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTCCACGTATTGCCGCTaGTATTGCCATAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLSTYCR*YCHSYH
Trigger: ATGATAACTATGGCAATAGCAGCGGCAATACGTGGA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATCCTTTCCCTAACATaGTCACCATACTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAILSLT*SPYCDE
Trigger: CTCATCACAGTATGGTGAGCATGTTAGGGAAAGGAT...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAATCCTTTCCCTAACATaGTCACCATACTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPILSLT*SPYCDE
Trigger: CTCATCACAGTATGGTGAGCATGTTAGGGAAAGGAT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATGAGCCGATGTGGATTTaGTTGGCAGAGGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDEPMWI*LAEEKT
Trigger: CGTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTC...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAATGATTCACTGGCCGTaGTGGTATACAGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVMIHWP*WYTGYL
Trigger: CAAGTAGCCTGTATACCAGCACGGCCAGTGAATCAT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCTGTGTGGTCTGTAACTaGGTGGCCTGCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITCVVCN*VACTEL
Trigger: CAGTTCTGTGCAGGCCACGCAGTTACAGACCACACA...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGTGTGTGGTCTGTAACTaGGTGGCCTGCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKCVVCN*VACTEL
Trigger: CAGTTCTGTGCAGGCCACGCAGTTACAGACCACACA...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTERVFC*VDNVLL
Trigger: CAGCAGCACGTTATCTACGCAGCAGAATACCCTTTC...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHERVFC*VDNVLL
Trigger: CAGCAGCACGTTATCTACGCAGCAGAATACCCTTTC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHERVFC*VDNVLL
Trigger: CAGCAGCACGTTATCTACGCAGCAGAATACCCTTTC...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATAGATGAAAGGGTATTCTaGTGCGTAGATAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFHCLQGPARGGPVGTVIDERVF*CVDNVL
Trigger: CAGCACGTTATCTACGCAGCAGAATACCCTTTCATC...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDEWMSK*AQKMLM
Trigger: CATCAACATCTTCTGGGCGCACTTCGACATCCACTC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACTCTCCACACTTGTGTaGAAAAGAGTGGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGELSTLV*KRVDVE
Trigger: TTCGACATCCACTCTTTTGCACACAAGTGTGGAGAG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDADHWGR*RDCAGC
Trigger: ACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSDHWGR*RDCAGC
Trigger: ACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATCTGACATTCACACCATaGTGCTTGGAAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHLTFTP*CLEEVG
Trigger: TCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAG...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCATGGCCACCATCCTTCTaGCCTGAGACTCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPWPPSF*PETPFF
Trigger: GAAGAAGGGAGTCTCAGGCCAGAAGGATGGTGGCCA...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGTCATTGGATTCCGTCTaGCCACCATCCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKSLDSV*PPSFWP
Trigger: AGGCCAGAAGGATGGTGGCCAGACGGAATCCAATGA...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTKALHS*CHPIHF
Trigger: AAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATACTCTGCATAATCAGCTaGGTTAAAGGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LFHCLQGPARGGPVGTVILCIIS*VKGSHS
Trigger: GGAATGGGAACCTTTAACCCAGCTGATTATGCAGAG...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACCTCTGCATAATCAGCTaGGTTAAAGGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDLCIIS*VKGSHS
Trigger: GGAATGGGAACCTTTAACCCAGCTGATTATGCAGAG...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAATCATCAGTATTGGCTaGCTCTGCATAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTIISIG*LCIISW
Trigger: CCAGCTGATTATGCAGAGCCAGCCAATACTGATGAT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGAGTTATCATCAGTATTaGCTGGCTCTGCATAATCAG +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWSYHQY*LALHNQ
Trigger: CTGATTATGCAGAGCCAGCCAATACTGATGATAACT...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATACTCGTCCCATCATCTaGTTCAAAGTGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHTRPII*FKVASV
Trigger: AACACTGGCCACTTTGAACCAGATGATGGGACGAGT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAACTCGTCCCATCATCTaGTTCAAAGTGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVTRPII*FKVASV
Trigger: AACACTGGCCACTTTGAACCAGATGATGGGACGAGT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACATTCTCCATTGTAGATaGTGTCTTCCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNILHCR*CLPQQN
Trigger: GTTCTGCTGGGGAAGACACCATCTACAATGGAGAAT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATTGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYCPKRR*WCFQTE
Trigger: CTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACA...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEKRRSW*GWTHNQ
Trigger: CTGATTATGAGTCCACCCCCACCACGAGCGCCTCTT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACATTCACTGGCCGTGCTaGTATACAGGCTACTTGGAG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDIHWPC*YTGYLE
Trigger: CTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAAT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTACCGCCGAGTCTGTGTaGATCTCTGTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVTAESV*ISVHKE
Trigger: CTCTTTATGAACAGAGATCCACACAGACTCGGCGGT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATACCGCCGAGTCTGTGTaGATCTCTGTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHTAESV*ISVHKE
Trigger: CTCTTTATGAACAGAGATCCACACAGACTCGGCGGT...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGMKRWS*GTAESV
Trigger: CACAGACTCGGCGGTACCCCAGCTCCATCTCTTCAT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTACTTCAACAGATTGTGTaGTCTGTAACTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVLQQIV*SVTAWP
Trigger: AGGCCACGCAGTTACAGACCACACAATCTGTTGAAG...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAAGGATGAATGCTGATTaGTTGTCGTCAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPRMNAD*LSSVRK
Trigger: CTTCCTTACTGACGACAACCAATCAGCATTCATCCT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGGAATCTCCTCACTGTaGCTCAAGCCACCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLGISSL*LKPPKE
Trigger: CTCCTTGGGTGGCTTGAGCCACAGTGAGGAGATTCC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGCTGTAGTAATCCAATaGAAATCTTGTCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQAVVIQ*KSCLKH
Trigger: ATGCTTCAGACAAGATTTCCATTGGATTACTACAGC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNSGCGK*DAVVIQ
Trigger: TTGGATTACTACAGCATCCCATTTCCCACACCCACT...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDSGCGK*DAVVIQ
Trigger: TTGGATTACTACAGCATCCCATTTCCCACACCCACT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTTATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGATATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGYSMAG*CNCSQE
Trigger: CTCCTGGCTACAGTTACACCAGCCTGCCATACTATA...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHDPCIV*QAGVTV
Trigger: TACAGTTACACCAGCCTGCCATACTATACAGGGGTC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCAGAACCCGAGATATCTaGCACGCCCGTGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITRTRDI*HARVTG
Trigger: TCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCT...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACCGCTTGAACTTGAAATaGGTAAGACAGGGTCAGACA +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRLNLK*VRQGQT
Trigger: TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCG...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAATACATACAACAGGGTaGGGATGGTATAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEIHTTG*GWYRNG
Trigger: CCCATTCCTATACCATCCCCACCCTGTTGTATGTAT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTCTGCTTCGAATTACTaGACACCAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGSASNY*TPEAGP
Trigger: TGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGGGCTTGGGCAGTCTTaGATTGCTCCAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAGLGQS*IAPRTG
Trigger: CCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGGTAGCCACTGCAGGTaGCTTCTCCTGAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSGSHCR*LLLKEH
Trigger: GTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLERGLVV*RSRRHL
Trigger: CAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAAAGCCATTCTTTGCCTaGGTCAGGTCCTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGKPFFA*VRSFWG
Trigger: ACCCCAAAAGGACCTGACTCAGGCAAAGAATGGCTT...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTGGCCTGCACAGAACTaGAGCCATTCTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGWPAQN*SHSLPE
Trigger: CTCAGGCAAAGAATGGCTTCAGTTCTGTGCAGGCCA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHKEDEC*LVVVSK
Trigger: CTTACTGACGACAACCAATCAGCATTCATCCTCCTT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGCCACCCAAGGAGGATaGATGCTGATTGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEATQGG*MLIGCR
Trigger: ACGACAACCAATCAGCATTCATCCTCCTTGGGTGGC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATCACGGCCGAACTTTGTaGGGTCACCAGAATAAGGGT +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYHGRTL*GHQNKG
Trigger: ACCCTTATTCTGGTGACCTCACAAAGTTCGGCCGTG...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRCCVVW*VCVWFC
Trigger: ACAGAACCAGACGCAGACTCACCATACCACGCAGCA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGCCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATCCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGTTACTGGAGGTGACTaGAACACCAGTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDVTGGD*NTSVVS
Trigger: GGATACAACACTGGTGTTTCAGTCACCTCCAGTAAC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGGGCTGAAGGCAAGTTaGAGGAAGCAGCAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSGLKAS*RKQQEY
Trigger: GTACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGTGTGGCCGCTGCTTGTaGTGTGTCTGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGCGRCL*CVWFWF
Trigger: AAACCAAAACCAGACACAGCACAAGCAGCGGCCACA...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGTGTGGCCGCTGCTTGTaGTGTGTCTGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKCGRCL*CVWFWF
Trigger: AAACCAAAACCAGACACAGCACAAGCAGCGGCCACA...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGAAGTCTAATTTGTTCTaGAGTGGCCTGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGKSNLF*SGLWPL
Trigger: CAGCGGCCACAGGCCACTGCAGAACAAATTAGACTT...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCTCTCCATTGCAGTCATaGAAAGCAATCACACATTCA +
Preference number: 4 (lower is better)
Translates to: SSKAQKVSTNSFPQATQASPLQS*KAITHS
Trigger: TGAATGTGTGATTGCTTTGCATGACTGCAATGGAGA...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCCACGTATTGCCGCTaGTATTGCCATAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPSTYCR*YCHSYH
Trigger: ATGATAACTATGGCAATAGCAGCGGCAATACGTGGA...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATCCACGTATTGCCGCTaGTATTGCCATAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGESTYCR*YCHSYH
Trigger: ATGATAACTATGGCAATAGCAGCGGCAATACGTGGA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTCCACGTATTGCCGCTaGTATTGCCATAGTTATCAT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDSTYCR*YCHSYH
Trigger: ATGATAACTATGGCAATAGCAGCGGCAATACGTGGA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGTGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRCCSTY*RCYCHS
Trigger: ACTATGGCAATAGCAGCGGCAATACGTGGAACAACA...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTCCSTY*RCYCHS
Trigger: ACTATGGCAATAGCAGCGGCAATACGTGGAACAACA...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHCCSTY*RCYCHS
Trigger: ACTATGGCAATAGCAGCGGCAATACGTGGAACAACA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATTGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHCCSTY*RCYCHS
Trigger: ACTATGGCAATAGCAGCGGCAATACGTGGAACAACA...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATGTGATATGGCAGTCTaGTTCGAATTACTGAACACC +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTCDMAV*FELLNT
Trigger: GGTGTTCAGTAATTCGAAGCAGACTGCCATATCACA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATGTGATATGGCAGTCTaGTTCGAATTACTGAACACC +
Preference number: 4 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGECDMAV*FELLNT
Trigger: GGTGTTCAGTAATTCGAAGCAGACTGCCATATCACA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATCCTTTCCCTAACATaGTCACCATACTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNILSLT*SPYCDE
Trigger: CTCATCACAGTATGGTGAGCATGTTAGGGAAAGGAT...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTGGGCAGTCTTGAATTaGTCCAAGAACTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDWAVLN*SKNWEP
Trigger: AGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCA...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGAAGAGGAGGTGGTGGTaGTTCCAGACTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKKRRWW*FQTENA
Trigger: AGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTT...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATTCTTCAAATCATACTaGACCAGTGATGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPFFKSY*TSDGDC
Trigger: ACAATCCCCATCACTGGTGCAGTATGATTTGAAGAA...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGAGCCGATGTGGATTTaGTTGGCAGAGGAGAAGACG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEEPMWI*LAEEKT
Trigger: CGTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGATGAAAGGGTATTCTaGTGCGTAGATAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHDERVF*CVDNVL
Trigger: CAGCACGTTATCTACGCAGCAGAATACCCTTTCATC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATG +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGEWMSK*AQKMLM
Trigger: CATCAACATCTTCTGGGCGCACTTCGACATCCACTC...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACTCTCCACACTTGTGTaGAAAAGAGTGGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTLSTLV*KRVDVE
Trigger: TTCGACATCCACTCTTTTGCACACAAGTGTGGAGAG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACAGGAAGCAAAGGAAGTaGAGGGCCCATAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDRKQRK*RAHSKV
Trigger: AACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAAAGTCAGCATCATTATaGTCCGAAATCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPKSASL*SEIICA
Trigger: TGCACAGATGATTTCGGACCATAATGATGCTGACTT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGATCACACATTCATCCTaGTTCTTGCCTGTAATATCA +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWITHSS*FLPVIS
Trigger: TGATATTACAGGCAAGAACCAGGATGAATGTGTGAT...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGTCATTGGATTCCGTCTaGCCACCATCCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLSLDSV*PPSFWP
Trigger: AGGCCAGAAGGATGGTGGCCAGACGGAATCCAATGA...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACTCTGCATAATCAGCTaGGTTAAAGGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTLCIIS*VKGSHS
Trigger: GGAATGGGAACCTTTAACCCAGCTGATTATGCAGAG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATCTCTGCATAATCAGCTaGGTTAAAGGTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHLCIIS*VKGSHS
Trigger: GGAATGGGAACCTTTAACCCAGCTGATTATGCAGAG...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTATTCTCCATTGTAGATaGTGTCTTCCCCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVILHCR*CLPQQN
Trigger: GTTCTGCTGGGGAAGACACCATCTACAATGGAGAAT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGAATTGCTCCAAGAACTaGGAGCCTGTAGTACTGCCG +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGNCSKN*EPVVLP
Trigger: CGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATT...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCACCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAAT +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPPKRRW*CFQTEN
Trigger: ATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGG...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATCTGTGGAGCCGATGTaGATTTGCTTGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLESVEPM*ICLAEE
Trigger: CTCCTCTGCCAAGCAAATCCACATCGGCTCCACAGA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTCCAGGCGACATCTGTaGAGCCGATGTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGSRRHL*SRCGFA
Trigger: AGCAAATCCACATCGGCTCCACAGATGTCGCCTGGA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACGCTCGTGGTGGGGGTaGACTCATAATCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLERSWWG*THNQKG
Trigger: TCCTTTCTGATTATGAGTCCACCCCCACCACGAGCG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGGGTTGTCGACTGAATTaGGCCGCTCTGATAACCAGA +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGGCRLN*AALITR
Trigger: TCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACC...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGGGGTGATGAAGAGATaGAGCTGGGGTACCGCCGAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGGVMKR*SWGTAE
Trigger: CTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACAGGATGAATGCTGATTaGTTGTCGTCAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRMNAD*LSSVRK
Trigger: CTTCCTTACTGACGACAACCAATCAGCATTCATCCT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCTGTGGTGGTAGTATTTaGAATCTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTCGGSI*NLLTVA
Trigger: AGCCACAGTGAGGAGATTCCAAATACTACCACCACA...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTATGTGGTGGTAGTATTTaGAATCTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVCGGSI*NLLTVA
Trigger: AGCCACAGTGAGGAGATTCCAAATACTACCACCACA...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGACTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNGDTDH*GRCRDC
Trigger: ACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCC...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGGCTGTAGTAATCCAATaGAAATCTTGTCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWAVVIQ*KSCLKH
Trigger: ATGCTTCAGACAAGATTTCCATTGGATTACTACAGC...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTSGCGK*DAVVIQ
Trigger: TTGGATTACTACAGCATCCCATTTCCCACACCCACT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHSGCGK*DAVVIQ
Trigger: TTGGATTACTACAGCATCCCATTTCCCACACCCACT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTCAGAATAAGGGTTGCTaGCCAGGCTACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAQNKGC*PGYHPS
Trigger: GGAGGGATGGTAGCCTGGCCAGCAACCCTTATTCTG...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATAGGACTGCTGGGTTTTaGAGTACACAGAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDRTAGF*STQNPR
Trigger: TCTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCT...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATACTTATTCACCAAGCTaGTCATCGACGAAATTGAGG +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNTYSPS*SSTKLR
Trigger: CCTCAATTTCGTCGATGACCAGCTTGGTGAATAAGT...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGGGGCTTCTGCGGGATaGAGCTGGTCTGGCTACGTT +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGGASAG*SWSGYV
Trigger: AACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCATCCAATCCATTTTCCTaGCCTCGAACCACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPSNPFS*PRTTAG
Trigger: ACCAGCTGTGGTTCGAGGTCAGGAAAATGGATTGGA...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTTCTCTGACCAGCAGTaGTTGTCACATTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGFSDQQ*LSHSPQ
Trigger: CTGCGGAGAATGTGACAATCACTGCTGGTCAGAGAA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACCGGATCCAGATTAGATaGATCATTCTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRIQIR*IILHCR
Trigger: TCTACAATGGAGAATGATTCATCTAATCTGGATCCG...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGCCAGAGAAGGAGCCTaGGACGGATCCAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAAREGA*DGSRLD
Trigger: ATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGATCATACTGCACCAGTaGTGGGGATTGTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGIILHQ*WGLCRR
Trigger: TCGACGACACAATCCCCATCACTGGTGCAGTATGAT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGGGGCTGTGCACTGCTaGATCACTTGGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSGAVHC*ITWVLQ
Trigger: TTGAAGAACCCAAGTGATTCAGCAGTGCACAGCCCC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGCCACCCAAGGAGGATaGATGCTGATTGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAATQGG*MLIGCR
Trigger: ACGACAACCAATCAGCATTCATCCTCCTTGGGTGGC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGCCAGTGTTGTATCCATaGGACCCATATCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRPVLYP*DPYPLG
Trigger: GCCGAGTGGATATGGGTCTCATGGATACAACACTGG...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGCCGTGTTACTGGAGGTaGCTGAAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGPCYWR*LKHQCC
Trigger: ACAACACTGGTGTTTCAGTCACCTCCAGTAACACGG...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAAGTCTAATTTGTTCTaGAGTGGCCTGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLKSNLF*SGLWPL
Trigger: CAGCGGCCACAGGCCACTGCAGAACAAATTAGACTT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYALHSW*HPIHFP
Trigger: AGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGC...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTSIGWL*IISWVK
Trigger: TTTAACCCAGCTGATTATGCAGAGCCAGCCAATACT...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVSIGWL*IISWVK
Trigger: TTTAACCCAGCTGATTATGCAGAGCCAGCCAATACT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATATCCTTTCCCTAACATaGTCACCATACTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHILSLT*SPYCDE
Trigger: CTCATCACAGTATGGTGAGCATGTTAGGGAAAGGAT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTGGGCAGTCTTGAATTaGTCCAAGAACTGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGWAVLN*SKNWEP
Trigger: AGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAAGAGGAGGTGGTGGTaGTTCCAGACTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEKRRWW*FQTENA
Trigger: AGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTTCTTCAAATCATACTaGACCAGTGATGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPFFKSY*TSDGDC
Trigger: ACAATCCCCATCACTGGTGCAGTATGATTTGAAGAA...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATATGATTCACTGGCCGTaGTGGTATACAGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNMIHWP*WYTGYL
Trigger: CAAGTAGCCTGTATACCAGCACGGCCAGTGAATCAT...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITERVFC*VDNVLL
Trigger: CAGCAGCACGTTATCTACGCAGCAGAATACCCTTTC...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGATGAAAGGGTATTCTaGTGCGTAGATAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDDERVF*CVDNVL
Trigger: CAGCACGTTATCTACGCAGCAGAATACCCTTTCATC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATCTGACATTCACACCATaGTGCTTGGAAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDLTFTP*CLEEVG
Trigger: TCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAG...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGCTGACATTCACACCATaGTGCTTGGAAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKLTFTP*CLEEVG
Trigger: TCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAG...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGATCCCTCTCCCTTTACTaGCTGAAATCGGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGSLSLY*LKSAVD
Trigger: ATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGA...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCTTCTTTAGTGATTTCTaGGACTTTAGCGCACCCATC +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTFFSDF*DFSAPI
Trigger: GATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAA...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTTCTGCAGTGGCCTGTaGCCGCTGCTTGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGFCSGL*PLLVLC
Trigger: ACACAGCACAAGCAGCGGCCACAGGCCACTGCAGAA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATAAAGTCAGCATCATTATaGTCCGAAATCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LFHCLQGPARGGPVGTVIKSASL*SEIICA
Trigger: TGCACAGATGATTTCGGACCATAATGATGCTGACTT...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGCCAGGAATGCGTGTCTaGGTTTCCTTCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLPGMRV*VSFQKN
Trigger: GTTCTTCTGGAAGGAAACCCAGACACGCATTCCTGG...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACATCATCAGTATTGGCTaGCTCTGCATAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDIISIG*LCIISW
Trigger: CCAGCTGATTATGCAGAGCCAGCCAATACTGATGAT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATAAGTTATCATCAGTATTaGCTGGCTCTGCATAATCAG +
Preference number: 4 (lower is better)
Translates to: LFHCLQGPARGGPVGTVISYHQY*LALHNQ
Trigger: CTGATTATGCAGAGCCAGCCAATACTGATGATAACT...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATACTCGTCCCATCATCTaGTTCAAAGTGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNTRPII*FKVASV
Trigger: AACACTGGCCACTTTGAACCAGATGATGGGACGAGT...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAATTGCTCCAAGAACTaGGAGCCTGTAGTACTGCCG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGNCSKN*EPVVLP
Trigger: CGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTCCAGGCGACATCTGTaGAGCCGATGTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRSRRHL*SRCGFA
Trigger: AGCAAATCCACATCGGCTCCACAGATGTCGCCTGGA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTCGCTCGTGGTGGGGGTaGACTCATAATCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDARSWWG*THNQKG
Trigger: TCCTTTCTGATTATGAGTCCACCCCCACCACGAGCG...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGGTTGTCGACTGAATTaGGCCGCTCTGATAACCAGA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEGCRLN*AALITR
Trigger: TCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCTTCAACAGATTGTGTaGTCTGTAACTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITLQQIV*SVTAWP
Trigger: AGGCCACGCAGTTACAGACCACACAATCTGTTGAAG...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTGTGGTGGTAGTATTTaGAATCTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDCGGSI*NLLTVA
Trigger: AGCCACAGTGAGGAGATTCCAAATACTACCACCACA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGTGCTGGAGGAAGAATaGAGATTCGCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAVLEEE*RFASLS
Trigger: GGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCAC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCACTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGTGCAGAGACTGTGCTaGATGTGGTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLVQRLC*MWWKKC
Trigger: GCACTTTTTCCACCACATCCAGCACAGTCTCTGCAC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSGMSAA*YGESAS
Trigger: AGACGCAGACTCACCATACCACGCAGCAGACATTCC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNDPCIV*QAGVTV
Trigger: TACAGTTACACCAGCCTGCCATACTATACAGGGGTC...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGACTGCTGGGTTTTaGAGTACACAGAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLRTAGF*STQNPR
Trigger: TCTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTTCTCAAAGGACTGCTaGGTTTTGGAGTACACAGAA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHFSKDC*VLEYTE
Trigger: TTCTGTGTACTCCAAAACCCAGCAGTCCTTTGAGAA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTTTCTCAAAGGACTGCTaGGTTTTGGAGTACACAGAA +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVFSKDC*VLEYTE
Trigger: TTCTGTGTACTCCAAAACCCAGCAGTCCTTTGAGAA...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCACTTATTCACCAAGCTaGTCATCGACGAAATTGAGG +
Preference number: 4 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTTYSPS*SSTKLR
Trigger: CCTCAATTTCGTCGATGACCAGCTTGGTGAATAAGT...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAAATGAAGATTTGTGGTaGTTCTTTCCAGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGNEDLW*FFPVTR
Trigger: CCTGGTGACTGGAAAGAACCACCACAAATCTTCATT...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAATGCTTGTAAGGGGGTaGATATTTTCTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTMLVRG*IFSSSV
Trigger: AACACTGGAAGAAAATATCCACCCCCTTACAAGCAT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGCAGACTTGTTGGTCTaGGGCTTCTGCGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGADLLV*GFCGME
Trigger: CTCCATCCCGCAGAAGCCCCAGACCAACAAGTCTGC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAAGGTTCCCATTCCTTaGGCAGAAAACCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLKVPIP*AENLPP
Trigger: AGGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGCAAGGTCAATTCTCTaGCCAGCAGTGATTGTCACA +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLARSIL*PAVIVT
Trigger: TGTGACAATCACTGCTGGTCAGAGAATTGACCTTGC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATGCCAGAGAAGGAGCCTaGGACGGATCCAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNAREGA*DGSRLD
Trigger: ATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGC...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTG +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNRGLVV*RSRRHL
Trigger: CAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCT...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTAAGCCATTCTTTGCCTaGGTCAGGTCCTTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAKPFFA*VRSFWG
Trigger: ACCCCAAAAGGACCTGACTCAGGCAAAGAATGGCTT...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR TCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPKEDEC*LVVVSK
Trigger: CTTACTGACGACAACCAATCAGCATTCATCCTCCTT...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATGTTACTGGAGGTGACTaGAACACCAGTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYVTGGD*NTSVVS
Trigger: GGATACAACACTGGTGTTTCAGTCACCTCCAGTAAC...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGTTACTGGAGGTGACTaGAACACCAGTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLVTGGD*NTSVVS
Trigger: GGATACAACACTGGTGTTTCAGTCACCTCCAGTAAC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGCCGTGTTACTGGAGGTaGCTGAAACACCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRPCYWR*LKHQCC
Trigger: ACAACACTGGTGTTTCAGTCACCTCCAGTAACACGG...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATCCAATCCATTTTCCTaGCCTCGAAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLESNPFS*PRNSRP
Trigger: TGGACGAGAGTTTCGAGGTCAGGAAAATGGATTGGA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAALHSW*HPIHFP
Trigger: AGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTATTGCCGCTGCTATTaGCATAGTTATCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDYCRCY*HSYHQY
Trigger: ATACTGATGATAACTATGGCAATAGCAGCGGCAATA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATATTGCCGCTGCTATTaGCATAGTTATCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTYCRCY*HSYHQY
Trigger: ATACTGATGATAACTATGGCAATAGCAGCGGCAATA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTGTGATATGGCAGTCTaGTTCGAATTACTGAACACC +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDCDMAV*FELLNT
Trigger: GGTGTTCAGTAATTCGAAGCAGACTGCCATATCACA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATTCTTCAAATCATACTaGACCAGTGATGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTFFKSY*TSDGDC
Trigger: ACAATCCCCATCACTGGTGCAGTATGATTTGAAGAA...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTTCTTCAAATCATACTaGACCAGTGATGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHFFKSY*TSDGDC
Trigger: ACAATCCCCATCACTGGTGCAGTATGATTTGAAGAA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTTTGTAAAGGGGCTGTaGACTGCTGAATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGFVKGL*TAESLG
Trigger: CCCAAGTGATTCAGCAGTGCACAGCCCCTTTACAAA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCATGCAATGCCCCAAACTaGAGGTTTAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPCNAPN*RFSPEI
Trigger: TATCTCAGGGCTAAACCTGCAGTTTGGGGCATTGCA...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATGCAATGCCCCAAACTaGAGGTTTAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLECNAPN*RFSPEI
Trigger: TATCTCAGGGCTAAACCTGCAGTTTGGGGCATTGCA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATACTGAAGCCATTCTTTaGCTGAGTCAGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNTEAIL*LSQVLL
Trigger: CAAAAGGACCTGACTCAGGCAAAGAATGGCTTCAGT...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGACTGAAGCCATTCTTTaGCTGAGTCAGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKTEAIL*LSQVLL
Trigger: CAAAAGGACCTGACTCAGGCAAAGAATGGCTTCAGT...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATGATGAAAGGGTATTCTaGTGCGTAGATAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNDERVF*CVDNVL
Trigger: CAGCACGTTATCTACGCAGCAGAATACCCTTTCATC...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGATGAAAGGGTATTCTaGTGCGTAGATAACGTGCTG +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKDERVF*CVDNVL
Trigger: CAGCACGTTATCTACGCAGCAGAATACCCTTTCATC...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATCTCTCCACACTTGTGTaGAAAAGAGTGGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNLSTLV*KRVDVE
Trigger: TTCGACATCCACTCTTTTGCACACAAGTGTGGAGAG...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGCTCTCCACACTTGTGTaGAAAAGAGTGGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKLSTLV*KRVDVE
Trigger: TTCGACATCCACTCTTTTGCACACAAGTGTGGAGAG...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCACCAGAATAAGGGTTaGTGGCCAGGCTACCATCCC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGHQNKG*WPGYHP
Trigger: GGGATGGTAGCCTGGCCAGCAACCCTTATTCTGGTG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACTGACATTCACACCATaGTGCTTGGAAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLELTFTP*CLEEVG
Trigger: TCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGAAAGGGGTGGCCGATaGATTCACACTGACATTCAC +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAERGGR*IHTDIH
Trigger: GTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEKALHS*CHPIHF
Trigger: AAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGATCATCAGTATTGGCTaGCTCTGCATAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGIISIG*LCIISW
Trigger: CCAGCTGATTATGCAGAGCCAGCCAATACTGATGAT...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAGTTATCATCAGTATTaGCTGGCTCTGCATAATCAG +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHSYHQY*LALHNQ
Trigger: CTGATTATGCAGAGCCAGCCAATACTGATGATAACT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAAGTTATCATCAGTATTaGCTGGCTCTGCATAATCAG +
Preference number: 4 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTSYHQY*LALHNQ
Trigger: CTGATTATGCAGAGCCAGCCAATACTGATGATAACT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCTCATCTGGTTCAAAGTaGCCAGTGTTGTTCCACGTA +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITSSGSK*PVLFHV
Trigger: TACGTGGAACAACACTGGCCACTTTGAACCAGATGA...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGACTCGTCCCATCATCTaGTTCAAAGTGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGTRPII*FKVASV
Trigger: AACACTGGCCACTTTGAACCAGATGATGGGACGAGT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGCPKRR*WCFQTE
Trigger: CTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGKRRSW*GWTHNQ
Trigger: CTGATTATGAGTCCACCCCCACCACGAGCGCCTCTT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAACCGCCGAGTCTGTGTaGATCTCTGTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLETAESV*ISVHKE
Trigger: CTCTTTATGAACAGAGATCCACACAGACTCGGCGGT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACAGGATGAATGCTGATTaGTTGTCGTCAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDRMNAD*LSSVRK
Trigger: CTTCCTTACTGACGACAACCAATCAGCATTCATCCT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTCAGGAGTTCTTAAAGGGCGAAGATTTCATTTTATTCCACTGCCTTCAGGGGTGTGGTGGTAGTATTTaGAATCTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQEFLKGEDFILFHCLQGCGGSI*NLLTVA
Trigger: AGCCACAGTGAGGAGATTCCAAATACTACCACCACA...CCCCTGAAGGCAGTGGAATAAAATGAAATCTTCGCCCTTTAAGAACTCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTTGTGTGCAAAAGAGTaGATGTCGAAGTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRLCAKE*MSKCAQ
Trigger: CTGGGCGCACTTCGACATCCACTCTTTTGCACACAA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATGTGCTGGAGGAAGAATaGAGATTCGCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNVLEEE*RFASLS
Trigger: GGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCAC...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGCTGTAGTAATCCAATaGAAATCTTGTCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNAVVIQ*KSCLKH
Trigger: ATGCTTCAGACAAGATTTCCATTGGATTACTACAGC...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGDPCIV*QAGVTV
Trigger: TACAGTTACACCAGCCTGCCATACTATACAGGGGTC...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTTCTCAAAGGACTGCTaGGTTTTGGAGTACACAGAA +
Preference number: 4 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDFSKDC*VLEYTE
Trigger: TTCTGTGTACTCCAAAACCCAGCAGTCCTTTGAGAA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTCCTCCTGCTGGCGCTaGCAACAGAGAATCATCTGC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGSSCWR*QQRIIC
Trigger: GCAGATGATTCTCTGTTGCCAGCGCCAGCAGGAGGA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTCTGCTTCGAATTACTaGACACCAGAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGSASNY*TPEAGP
Trigger: TGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTGGCCTGCACAGAACTaGAGCCATTCTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGWPAQN*SHSLPE
Trigger: CTCAGGCAAAGAATGGCTTCAGTTCTGTGCAGGCCA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCACGGCCGAACTTTGTaGGGTCACCAGAATAAGGGT +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGHGRTL*GHQNKG
Trigger: ACCCTTATTCTGGTGACCTCACAAAGTTCGGCCGTG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR GCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCATTTGATAAAGCCCCATaGATACACTCTCGTCCACGG +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSFDKAP*IHSRPR
Trigger: CCGTGGACGAGAGTGTATGCATGGGGCTTTATCAAA...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGCCSTY*RCYCHS
Trigger: ACTATGGCAATAGCAGCGGCAATACGTGGAACAACA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATTGTGATATGGCAGTCTaGTTCGAATTACTGAACACC +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNCDMAV*FELLNT
Trigger: GGTGTTCAGTAATTCGAAGCAGACTGCCATATCACA...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCATTTGTAAAGGGGCTGTaGACTGCTGAATCACTTGGG +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSFVKGL*TAESLG
Trigger: CCCAAGTGATTCAGCAGTGCACAGCCCCTTTACAAA...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTATGATTCACTGGCCGTaGTGGTATACAGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAMIHWP*WYTGYL
Trigger: CAAGTAGCCTGTATACCAGCACGGCCAGTGAATCAT...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAERVFC*VDNVLL
Trigger: CAGCAGCACGTTATCTACGCAGCAGAATACCCTTTC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCACTCTCCACACTTGTGTaGAAAAGAGTGGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPLSTLV*KRVDVE
Trigger: TTCGACATCCACTCTTTTGCACACAAGTGTGGAGAG...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCATTCATTTTATTCCACTaGCTTCAGGGGCCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPFILFH*LQGPAR
Trigger: TCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAA...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGACCAGACGATACATGTTaGCTTCACTTCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGPDDTC*LHFFLV
Trigger: AACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGG...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCTTCTTTAGTGATTTCTaGGACTTTAGCGCACCCATC +
Preference number: 4 (lower is better)
Translates to: VTWMSSLVISATLAHPSPFFSDF*DFSAPI
Trigger: GATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAA...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGAAACAAGACTTCAGTaGAAATTTATACACACACAC +
Preference number: 4 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDETRLQ*KFIHTH
Trigger: GTGTGTGTGTATAAATTTGCACTGAAGTCTTGTTTC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAGAAACAAGACTTCAGTaGAAATTTATACACACACAC +
Preference number: 4 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTETRLQ*KFIHTH
Trigger: GTGTGTGTGTATAAATTTGCACTGAAGTCTTGTTTC...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAATCACACATTCATCCTaGTTCTTGCCTGTAATATCA +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVITHSS*FLPVIS
Trigger: TGATATTACAGGCAAGAACCAGGATGAATGTGTGAT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATATCACACATTCATCCTaGTTCTTGCCTGTAATATCA +
Preference number: 4 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHITHSS*FLPVIS
Trigger: TGATATTACAGGCAAGAACCAGGATGAATGTGTGAT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCCAGGAATGCGTGTCTaGGTTTCCTTCCAGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNPGMRV*VSFQKN
Trigger: GTTCTTCTGGAAGGAAACCCAGACACGCATTCCTGG...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTCATTGGATTCCGTCTaGCCACCATCCTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGSLDSV*PPSFWP
Trigger: AGGCCAGAAGGATGGTGGCCAGACGGAATCCAATGA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAATCATCAGTATTGGCTaGCTCTGCATAATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEIISIG*LCIISW
Trigger: CCAGCTGATTATGCAGAGCCAGCCAATACTGATGAT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAAGGATGAATGCTGATTaGTTGTCGTCAGTAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGRMNAD*LSSVRK
Trigger: CTTCCTTACTGACGACAACCAATCAGCATTCATCCT...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGTGCTGGAGGAAGAATaGAGATTCGCCTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGVLEEE*RFASLS
Trigger: GGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCAC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAGCTGTAGTAATCCAATaGAAATCTTGTCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVAVVIQ*KSCLKH
Trigger: ATGCTTCAGACAAGATTTCCATTGGATTACTACAGC...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLSGCGK*DAVVIQ
Trigger: TTGGATTACTACAGCATCCCATTTCCCACACCCACT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCAAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPSGCGK*DAVVIQ
Trigger: TTGGATTACTACAGCATCCCATTTCCCACACCCACT...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDADPCIV*QAGVTV
Trigger: TACAGTTACACCAGCCTGCCATACTATACAGGGGTC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAGAACCCGAGATATCTaGCACGCCCGTGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGRTRDI*HARVTG
Trigger: TCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATAGGACTGCTGGGTTTTaGAGTACACAGAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNRTAGF*STQNPR
Trigger: TCTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCT...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATTTCTCAAAGGACTGCTaGGTTTTGGAGTACACAGAA +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNFSKDC*VLEYTE
Trigger: TTCTGTGTACTCCAAAACCCAGCAGTCCTTTGAGAA...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCAATGAAGATTTGTGGTaGTTCTTTCCAGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITNEDLW*FFPVTR
Trigger: CCTGGTGACTGGAAAGAACCACCACAAATCTTCATT...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATTTTAGTTTATTTGCCTaGACCCATCTAAGTCATACT +
Preference number: 4 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNFSLFA*THLSHT
Trigger: AGTATGACTTAGATGGGTCCAGGCAAATAAACTAAA...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGATACATACAACAGGGTaGGGATGGTATAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGIHTTG*GWYRNG
Trigger: CCCATTCCTATACCATCCCCACCCTGTTGTATGTAT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR TCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGGATCCAGATTAGATaGATCATTCTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITRIQIR*IILHCR
Trigger: TCTACAATGGAGAATGATTCATCTAATCTGGATCCG...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR TCA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGCGGATCCAGATTAGATaGATCATTCTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: HAFQKSKATAGVCIDASKRIQIR*IILHCR
Trigger: TCTACAATGGAGAATGATTCATCTAATCTGGATCCG...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATTCTCCATTGCAGTCATaGAAAGCAATCACACATTCA +
Preference number: 4 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNSPLQS*KAITHS
Trigger: TGAATGTGTGATTGCTTTGCATGACTGCAATGGAGA...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLESIGWL*IISWVK
Trigger: TTTAACCCAGCTGATTATGCAGAGCCAGCCAATACT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGSIGWL*IISWVK
Trigger: TTTAACCCAGCTGATTATGCAGAGCCAGCCAATACT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTGACATTCACACCATaGTGCTTGGAAGAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNLTFTP*CLEEVG
Trigger: TCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAG...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR GCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCATTCATTTTATTCCACTaGCTTCAGGGGCCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSFILFH*LQGPAR
Trigger: TCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAA...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTT +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNKALHS*CHPIHF
Trigger: AAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTT...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAAAGCAGGCTGTGATATaGCAGTCTGCTTCGAATTAC +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSKQAVI*QSASNY
Trigger: GTAATTCGAAGCAGACTGCCATATCACAGCCTGCTT...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGGTTGTCGACTGAATTaGGCCGCTCTGATAACCAGA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGGCRLN*AALITR
Trigger: TCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTGTGGTGGTAGTATTTaGAATCTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDACGGSI*NLLTVA
Trigger: AGCCACAGTGAGGAGATTCCAAATACTACCACCACA...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTTGTGTGCAAAAGAGTaGATGTCGAAGTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGLCAKE*MSKCAQ
Trigger: CTGGGCGCACTTCGACATCCACTCTTTTGCACACAA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGLCWMW*KKCWRK
Trigger: CTTCCTCCAGCACTTTTTCCACCACATCCAGCACAG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTA +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNDPCIV*QAGVTV
Trigger: TACAGTTACACCAGCCTGCCATACTATACAGGGGTC...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGTTCTCAAAGGACTGCTaGGTTTTGGAGTACACAGAA +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLFSKDC*VLEYTE
Trigger: TTCTGTGTACTCCAAAACCCAGCAGTCCTTTGAGAA...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTTGGTGTTTGGTTACATaGATGAGTTCTTTAGTGATT +
Preference number: 4 (lower is better)
Translates to: EDFILFHCLQGPARGGPVWCLVT*MSSLVI
Trigger: AATCACTAAAGAACTCATCCATGTAACCAAACACCA...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAACAGGGTGGGGATaGTATAGGAATGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGTTGWG*YRNGTD
Trigger: GTCTGTCCCATTCCTATACCATCCCCACCCTGTTGT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR TCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACGGATCCAGATTAGATaGATCATTCTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLERIQIR*IILHCR
Trigger: TCTACAATGGAGAATGATTCATCTAATCTGGATCCG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTCTCCATTGCAGTCATaGAAAGCAATCACACATTCA +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGSPLQS*KAITHS
Trigger: TGAATGTGTGATTGCTTTGCATGACTGCAATGGAGA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATCTCCATTGCAGTCATaGAAAGCAATCACACATTCA +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLESPLQS*KAITHS
Trigger: TGAATGTGTGATTGCTTTGCATGACTGCAATGGAGA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGATGATTCACTGGCCGTaGTGGTATACAGGCTACTTG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGMIHWP*WYTGYL
Trigger: CAAGTAGCCTGTATACCAGCACGGCCAGTGAATCAT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAGGAAGCAAAGGAAGTaGAGGGCCCATAGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGRKQRK*RAHSKV
Trigger: AACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAGTTATCATCAGTATTaGCTGGCTCTGCATAATCAG +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLESYHQY*LALHNQ
Trigger: CTGATTATGCAGAGCCAGCCAATACTGATGATAACT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCGCTGTAGTAATCCAATaGAAATCTTGTCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITAVVIQ*KSCLKH
Trigger: ATGCTTCAGACAAGATTTCCATTGGATTACTACAGC...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGAAATGAAGATTTGTaGTGGTTCTTTCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRGNEDL*WFFPVT
Trigger: GGTGACTGGAAAGAACCACCACAAATCTTCATTTCC...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGGAAATGAAGATTTGTaGTGGTTCTTTCCAGTCACC +
Preference number: 4 (lower is better)
Translates to: LVTWMSSLVISATLAHPSGNEDL*WFFPVT
Trigger: GGTGACTGGAAAGAACCACCACAAATCTTCATTTCC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR TCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGKEDEC*LVVVSK
Trigger: CTTACTGACGACAACCAATCAGCATTCATCCTCCTT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAATATTGCCGCTGCTATTaGCATAGTTATCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEYCRCY*HSYHQY
Trigger: ATACTGATGATAACTATGGCAATAGCAGCGGCAATA...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTATTGCCGCTGCTATTaGCATAGTTATCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGYCRCY*HSYHQY
Trigger: ATACTGATGATAACTATGGCAATAGCAGCGGCAATA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCTCTCCACACTTGTGTaGAAAAGAGTGGATGTCGAA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGLSTLV*KRVDVE
Trigger: TTCGACATCCACTCTTTTGCACACAAGTGTGGAGAG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR GCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATCCAGACGATACATGTTaGCTTCACTTCTTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYPDDTC*LHFFLV
Trigger: AACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGG...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTAAGTCAGCATCATTATaGTCCGAAATCATCTGTGCA +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAKSASL*SEIICA
Trigger: TGCACAGATGATTTCGGACCATAATGATGCTGACTT...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGATCACACATTCATCCTaGTTCTTGCCTGTAATATCA +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLITHSS*FLPVIS
Trigger: TGATATTACAGGCAAGAACCAGGATGAATGTGTGAT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGTCATCTGGTTCAAAGTaGCCAGTGTTGTTCCACGTA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGSSGSK*PVLFHV
Trigger: TACGTGGAACAACACTGGCCACTTTGAACCAGATGA...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAAGCAGGCTGTGATATaGCAGTCTGCTTCGAATTAC +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGKQAVI*QSASNY
Trigger: GTAATTCGAAGCAGACTGCCATATCACAGCCTGCTT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CCA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGGCTGTAGTAATCCAATaGAAATCTTGTCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLAVVIQ*KSCLKH
Trigger: ATGCTTCAGACAAGATTTCCATTGGATTACTACAGC...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CCA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATTTTTTATTTCGTTTTTaGGGTACAGGTGGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYFLFRF*GTGGVW
Trigger: CCAAACACCACCTGTACCCCAAAAACGAAATAAAAA...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp TACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATTTAGTTCTGCCATTTTTATTTCGTTTTTaGGGTACAGGTGGTGTTTGG +
Preference number: 4 (lower is better)
Translates to: YPICSLSSLTPLQDLVLPFLFRF*GTGGVW
Trigger: CCAAACACCACCTGTACCCCAAAAACGAAATAAAAA...TGGCAGAACTAAATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CCA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTATGCTTGTAAGGGGGTaGATATTTTCTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAMLVRG*IFSSSV
Trigger: AACACTGGAAGAAAATATCCACCCCCTTACAAGCAT...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR GCA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTATTGCCGCTGCTATTaGCATAGTTATCATCAGTAT +
Preference number: 4 (lower is better)
Translates to: EMKICGGSFQSPGCESLRYCRCY*HSYHQY
Trigger: ATACTGATGATAACTATGGCAATAGCAGCGGCAATA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR GCA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCAACAGAGAATCATCTaGAAATATGGTAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGQQRII*KYGSWP
Trigger: TGGCCAGCTACCATATTTGCAGATGATTCTCTGTTG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATATCACACATTCATCCTaGTTCTTGCCTGTAATATCA +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNITHSS*FLPVIS
Trigger: TGATATTACAGGCAAGAACCAGGATGAATGTGTGAT...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CCA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATTTTAGTTTATTTGCCTaGACCCATCTAAGTCATACT +
Preference number: 4 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNFSLFA*THLSHT
Trigger: AGTATGACTTAGATGGGTCCAGGCAAATAAACTAAA...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS GCA 90 bp GCCCCGCCGCGCTGCCGCTGCCGCCGCCGCCGCCGCCAACGCCGCTaGGCTCCCAACTTTACCTCAGTCTCCTCCACACTGACACCCCGG +
Preference number: 5 (lower is better)
Translates to: APPRCRCRRRRRQRR*APNFTSVSSTLTPR
Trigger: CCGGGGTGTCAGTGTGGAGGAGACTGAGGTAAAGTTGGGAGCGCAGCGGCGTTGGCGGCGGCGGCGGCGGCAGCGGCAGCGCGGCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412596.5
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGCTGGTCTGGCTACGTaGCCCGCTGCCCGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGAGLAT*PAARLA
Trigger: GGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAGC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS CCA 90 bp CCCATGCATACACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCGACTATAGTCTCTGTCCCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PMHTLSSTAGTSPPS*WPTTSPTIVSVPVS
Trigger: CGAGACCGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTGTATGCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000368504.5
CDS CCA 90 bp CTGACCTCGAAACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCGACTATAGTCTCTGTCCCGGTCTCG +
Preference number: 5 (lower is better)
Translates to: LTSKLSSTAGTSPPS*WPTTSPTIVSVPVS
Trigger: CGAGACCGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTTTCGAGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS CCA 90 bp GGAAGGTGCTGGGGAGGCCCGGGACCCCTGTATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAGGCAGCGCCGGGTTCAGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: GRCWGGPGPLYSMAG*CNCSQEAAPGSGMS
Trigger: AGACATTCCTGAACCCGGCGCTGCCTCCTGGCTACAGTTACACCAGCCTGCCATACTATACAGGGGTCCCGGGCCTCCCCAGCACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CCA 90 bp ACCTCGAAACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACTATAGTCTCTGTCCCGGTCTCGATT +
Preference number: 5 (lower is better)
Translates to: TSKLSSTAGTSPPSW*PTTSPTIVSVPVSI
Trigger: AATCGAGACCGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTTTCGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS CCA 90 bp TGTTGTAGGCAGACTTGTTGGTCTGGGGCTTCTGCGGGATGGAGCTaGTCTGGCTACGTTGCCCGCTGCCCGTCTGGCCATCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: CCRQTCWSGASAGWS*SGYVARCPSGHPAA
Trigger: TGCAGCAGGATGGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCCAGACCAACAAGTCTGCCTACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGCTGTGACAGTGGAGTaGCTGCCTAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGAVTVE*LPRLRP
Trigger: GGGCCTCAGCCTAGGCAGCAACTCCACTGTCACAGC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCTGGTTCTGTTGGGGTaGGGCCAAGGTTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGLVLLG*GQGCGR
Trigger: CCGGCCACAACCTTGGCCCAACCCCAACAGAACCAG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTGAACTCTCCCCCGTCTaGGTGGCCCACCACGTCGCC +
Preference number: 5 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPELSPV*VAHHVA
Trigger: GGCGACGTGGTGGGCCACCAAGACGGGGGAGAGTTC...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613315.4
CDS CCA 90 bp ATGCATACACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACTATAGTCTCTGTCCCGGTCTCGATT +
Preference number: 5 (lower is better)
Translates to: MHTLSSTAGTSPPSW*PTTSPTIVSVPVSI
Trigger: AATCGAGACCGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTGTATGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000368504.5
CDS CCA 90 bp TGTAGCTGTTGTAGGCAGACTTGTTGGTCTGGGGCTTCTGCGGGATaGAGCTGGTCTGGCTACGTTGCCCGCTGCCCGTCTGGCCATCCT +
Preference number: 5 (lower is better)
Translates to: CSCCRQTCWSGASAG*SWSGYVARCPSGHP
Trigger: AGGATGGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCCAGACCAACAAGTCTGCCTACAACAGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS CCA 90 bp TGTAGCTGTTGTAGGCAGACTTGTTGGTCTGGGGCTTCTGCGGGATaGAGCTGGTCTGGCTACGTTGCCCGCTGCCCGTCTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CSCCRQTCWSGASAG*SWSGYVARCPSAPP
Trigger: AGGAGGAGCAGACGGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCCAGACCAACAAGTCTGCCTACAACAGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCGCCTGTGGCCGCTGCTaGTGCTGTGTCTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGACGRC*CCVWFW
Trigger: CCAAAACCAGACACAGCACAAGCAGCGGCCACAGGC...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS GCA 90 bp CCCGGCCCTTCTCTGAGATTTCCTTTGCCGGCCGCTCGTGTTATGTaGGCTTGTGTCTGTATGTGCTGTGTGCCCATGACTGGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: PGPSLRFPLPAARVM*ACVCMCCVPMTGAG
Trigger: CCCAGCGCCAGTCATGGGCACACAGCACATACAGACACAAGCGCACATAACACGAGCGGCCGGCAAAGGAAATCTCAGAGAAGGGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS CCA 90 bp AACTGTAGCCAGGAGGCAGCGCCGGGTTCAGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCTGGTTCTGTTGGGGTTGGGCCAAGG +
Preference number: 5 (lower is better)
Translates to: NCSQEAAPGSGMSAA*YGESASGSVGVGPR
Trigger: CCTTGGCCCAACCCCAACAGAACCAGACGCAGACTCACCATACCACGCAGCAGACATTCCTGAACCCGGCGCTGCCTCCTGGCTACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCTGGTTCTGTTGGGGTaGGGCCAAGGTTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQLVLLG*GQGCGR
Trigger: CCGGCCACAACCTTGGCCCAACCCCAACAGAACCAG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGISTRL*ERGGRC
Trigger: GCATCGGCCACCCCTTTCCAACAGCCGAGTGGATAT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS CCA 90 bp GTGATGGGGATTGTGTCGTCGAGCCCATGTCCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAATGCTGAGCTGCCAACTGAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: VMGIVSSSPCPKRRW*CFQTENAELPTEPG
Trigger: CCCTGGCTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACATGGGCTCGACGACACAATCCCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS-3UTR CAA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTGCCTGTGGCCGCTGCTaGTGCTGTGTCTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPACGRC*CCVWFW
Trigger: CCAAAACCAGACACAGCACAAGCAGCGGCCACAGGC...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGCCTGTGGCCGCTGCTaGTGCTGTGTCTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQACGRC*CCVWFW
Trigger: CCAAAACCAGACACAGCACAAGCAGCGGCCACAGGC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQYLEPG*KRRSWW
Trigger: CCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGCTGGTCTGGCTACGTaGCCCGCTGCCCGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEAGLAT*PAARLL
Trigger: GAGCAGACGGGCAGCGGGCAACGTAGCCAGACCAGC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428595.1
CDS GCA 90 bp ATGGGGATTGTGTCGTCGAGCCCATGTCCCAAGAGGAGGTGGTGGTaGTTCCAGACTGAGAATGCTGAGCTGCCAACTGAGCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: MGIVSSSPCPKRRWW*FQTENAELPTEPGL
Trigger: AAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACATGGGCTCGACGACACAATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CCA 90 bp CCAGTGATGGGGATTGTGTCGTCGAGCCCATGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAGAATGCTGAGCTGCCAACTGAGCCA +
Preference number: 5 (lower is better)
Translates to: PVMGIVSSSPCPKRR*WCFQTENAELPTEP
Trigger: TGGCTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACATGGGCTCGACGACACAATCCCCATCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCTGGTATACAGGCTACTaGGAGCCTGGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGWYTGY*EPGLKR
Trigger: CCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCA...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGCTGTGACAGTGGAGTaGCTGCCTAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLAVTVE*LPRLRP
Trigger: GGGCCTCAGCCTAGGCAGCAACTCCACTGTCACAGC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCTGGTTCTGTTGGGGTaGGGCCAAGGTTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLLVLLG*GQGCGR
Trigger: CCGGCCACAACCTTGGCCCAACCCCAACAGAACCAG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCCTGGTTCTGTTGGGGTaGGGCCAAGGTTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: SSKAQKVSTNSFPQATQALVLLG*GQGCGR
Trigger: CCGGCCACAACCTTGGCCCAACCCCAACAGAACCAG...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCGCAGCTGTGGCCGGATaGATGGGGCCCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPAAVAG*MGPPLP
Trigger: AGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTGC...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGCAGCTGTGGCCGGATaGATGGGGCCCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNAAVAG*MGPPLP
Trigger: AGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTGC...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS TCA 90 bp GGCTGGGAGAGGAAAGAGGGAAGGTGTGACCCAGGTCTGATGGGATaGGGACAACTGTGGCACAGGAGGAGAAGGGCACCAAAGGAATTG +
Preference number: 5 (lower is better)
Translates to: GWERKEGRCDPGLMG*GQLWHRRRRAPKEL
Trigger: CAATTCCTTTGGTGCCCTTCTCCTCCTGTGCCACAGTTGTCCTCATCCCATCAGACCTGGGTCACACCTTCCCTCTTTCCTCTCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS CCA 90 bp GCCCAGGCTACTGCCACTATTGAGACTGGAGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGTGCTGGATGTGGTGGAAAAAGTGCT +
Preference number: 5 (lower is better)
Translates to: AQATATIETGGDTDH*GRCRDCAGCGGKSA
Trigger: AGCACTTTTTCCACCACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS-3UTR CAA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTTGGGCAGTCTTGAATaGCTCCAAGAACTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHLGSLE*LQELGA
Trigger: GGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGAGCCGATGTGGATTaGCTTGGCAGAGGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQGADVD*LGRGED
Trigger: GTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTCC...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACAAGGACTGCTGGGTTTaGGAGTACACAGAACCCGAG +
Preference number: 5 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHKDCWV*EYTEPE
Trigger: CTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCTT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGCAGCTGTGGCCGGATaGATGGGGCCCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHAAVAG*MGPPLP
Trigger: AGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTGC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp AAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCTGCGCCTATCCGGGCTTaGACTCCTTATTCCAGGAGT +
Preference number: 5 (lower is better)
Translates to: KPRRYPPTHFPKPRRPWPAPIRA*TPYSRS
Trigger: ACTCCTGGAATAAGGAGTCAAAGCCCGGATAGGCGC...AGGCCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS TCA 90 bp GGTGGAGGTGCAGCTGTGGAGGTAGCCACTGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATGGTTGAAGATGGGGTAAAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGGAAVEVATAGDFS*RNTSIMVEDGVKAW
Trigger: CCAGGCTTTTACCCCATCTTCAACCATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACCTCCACAGCTGCACCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS TCA 90 bp CACAGAACCCGAGATATCTGGCACGCCCGTGTTACTGGAGGTGACTaGAACACCTGGGGGAGGAGGAAACAGACAGGAGGATTAGCTCAG +
Preference number: 5 (lower is better)
Translates to: HRTRDIWHARVTGGD*NTWGRRKQTGGLAQ
Trigger: CTGAGCTAATCCTCCTGTCTGTTTCCTCCTCCCCCAGGTGTTTCAGTCACCTCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS GCA 90 bp GTCCCAAGAGGAGGTGGTGGTGCTTCCAGACTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTGGGCAGTCTTGAATTGCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: VPRGGGGASRLRMLS*QLSQGLGSLELLQE
Trigger: TTCTTGGAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS GCA 90 bp TGTTGGAAAGGGGTGGCCGATGCATTCACACTGACATTCACACCATaGTGCTTGGAAGAGGTAGGAGCCACAGGGAACACAGCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: CWKGVADAFTLTFTP*CLEEVGATGNTAGP
Trigger: TGGGCCTGCTGTGTTCCCTGTGGCTCCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CCA 90 bp CTGTCCCGGTCTCGATTTTCTTTGCCTTCCTCATTGGATTCCGTCTaGCCACCATCCTTCTGGCCTGAGACTCCCTTCTTCTTCCCGACC +
Preference number: 5 (lower is better)
Translates to: LSRSRFSLPSSLDSV*PPSFWPETPFFFPT
Trigger: GGTCGGGAAGAAGAAGGGAGTCTCAGGCCAGAAGGATGGTGGCCAGACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000441890.5
ENST00000456325.5
ENST00000613315.4
CDS CCA 90 bp ACAGGCTACTTGGAGCCTGGCTTGAAGAGGCGCTCGTGGTGGGGGTaGACTCATAATCAGAAAGGACAGGCTCTGACCCAAACTGCAATG +
Preference number: 5 (lower is better)
Translates to: TGYLEPGLKRRSWWG*THNQKGQALTQTAM
Trigger: CATTGCAGTTTGGGTCAGAGCCTGTCCTTTCTGATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 90 bp TGCTGGTATACAGGCTACTTGGAGCCTGGCTTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAATCAGAAAGGACAGGCTCTGACCCAA +
Preference number: 5 (lower is better)
Translates to: CWYTGYLEPGLKRRS*WGWTHNQKGQALTQ
Trigger: TTGGGTCAGAGCCTGTCCTTTCTGATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 90 bp CCCTTCTGCCTCTTTCTGTTCCTCTTCCAGAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTTCCTGACCTCGAACTCTCCCCCGTC +
Preference number: 5 (lower is better)
Translates to: PFCLFLFLFQKALHS*CHPIHFPDLELSPV
Trigger: GACGGGGGAGAGTTCGAGGTCAGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTCTGGAAGAGGAACAGAAAGAGGCAGAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437652.5
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTCTTTGCCTTCCTCATaGGATTCCGTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQSLPSS*DSVWPP
Trigger: TGGTGGCCAGACGGAATCCAATGAGGAAGGCAAAGA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCGGTCTCGATTTTCTTaGCCTTCCTCATTGGATTCC +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGRSRFS*PSSLDS
Trigger: GGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCCGATGTGGATTTGCTaGGCAGAGGAGAAGACGGAG +
Preference number: 5 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWPMWIC*AEEKTE
Trigger: CTCCGTCTTCTCCTCTGCCAAGCAAATCCACATCGG...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGGGCTAGAGGACTGGTaGTCTGAAGATCCAGGCGAC +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLGLEDW*SEDPGD
Trigger: GTCGCCTGGATCTTCAGACAACCAGTCCTCTAGCCC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGAGGTTGTCGACTGAATaGGGCCGCTCTGATAACCAG +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQRLSTE*GRSDNQ
Trigger: CTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQFGRYR*STELGR
Trigger: GCGGCCCAATTCAGTCGACAACCTATACCTCCCAAA...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGCTGTGACAGTGGAGTaGCTGCCTAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: EDFILFHCLQGPARGGPVAVTVE*LPRLRP
Trigger: GGGCCTCAGCCTAGGCAGCAACTCCACTGTCACAGC...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATCTGGTTCTGTTGGGGTaGGGCCAAGGTTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHLVLLG*GQGCGR
Trigger: CCGGCCACAACCTTGGCCCAACCCCAACAGAACCAG...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCTGCGTCTGGTTCTGTaGGGGTTGGGCCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLLRLVL*GLGQGC
Trigger: ACAACCTTGGCCCAACCCCAACAGAACCAGACGCAG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAACACAGCCCCCAGCCTaGGGCCAAATTAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPTQPPA*GQISSQ
Trigger: CTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTGT...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAATGGGCTGATATATGTTaGGGGGTCCCACCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEWADIC*GVPPPR
Trigger: GCGGGGAGGTGGGACCCCCAAACATATATCAGCCCA...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS TCA 90 bp TGTTCCCTGAAGCAGGCTGTGATATGGCAGTCTGCTTCGAATTACTaGACACCAGAGGCTGGGCCAGAGAAGGAGCCTGAGACGGATCCA +
Preference number: 5 (lower is better)
Translates to: CSLKQAVIWQSASNY*TPEAGPEKEPETDP
Trigger: TGGATCCGTCTCAGGCTCCTTCTCTGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGACTGCCATATCACAGCCTGCTTCAGGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS TCA 90 bp TTTCAGTTTCTGCTGAGCCGGCTGAGGGCTAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTGTGGAGCCGATGTGGATTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FQFLLSRLRARGLVV*RSRRHLWSRCGFAW
Trigger: CCAAGCAAATCCACATCGGCTCCACAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCTAGCCCTCAGCCGGCTCAGCAGAAACTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS TCA 90 bp AGTACACAGAACCCGAGATATCTGGCACGCCCGTGTTACTGGAGGTaGCTGAAACACCTGGGGGAGGAGGAAACAGACAGGAGGATTAGC +
Preference number: 5 (lower is better)
Translates to: STQNPRYLARPCYWR*LKHLGEEETDRRIS
Trigger: GCTAATCCTCCTGTCTGTTTCCTCCTCCCCCAGGTGTTTCAGTCACCTCCAGTAACACGGGCGTGCCAGATATCTCGGGTTCTGTGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS GCA 90 bp CCACTGGGGGAGGTGCAGAGACTGTGCTGGATGTGGTGGAAAAAGTaGTGGAGGAAGAATGGAGATTCGCCTCACTCTCCACACTTGTGT +
Preference number: 5 (lower is better)
Translates to: PLGEVQRLCWMWWKK*WRKNGDSPHSPHLC
Trigger: ACACAAGTGTGGAGAGTGAGGCGAATCTCCATTCTTCCTCCAGCACTTTTTCCACCACATCCAGCACAGTCTCTGCACCTCCCCCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS GCA 90 bp ACTGCCACTATTGAGACTGGAGGAGACACTGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGTGGTGGAAAAAGTGCTGGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: TATIETGGDTDHWGR*RDCAGCGGKSAGGR
Trigger: TCTTCCTCCAGCACTTTTTCCACCACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTCTCAATAGTGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS CCA 90 bp TGGTATACAGGCTACTTGGAGCCTGGCTTGAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAGAAAGGACAGGCTCTGACCCAAACT +
Preference number: 5 (lower is better)
Translates to: WYTGYLEPGLKRRSW*GWTHNQKGQALTQT
Trigger: AGTTTGGGTCAGAGCCTGTCCTTTCTGATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS-3UTR CAA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACCGGTCTCGATTTTCTTaGCCTTCCTCATTGGATTCC +
Preference number: 5 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHRSRFS*PSSLDS
Trigger: GGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCG...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCACAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPQLSQG*GSLELL
Trigger: GAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTG...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGGAGCCGATGTGGATTaGCTTGGCAGAGGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLGADVD*LGRGED
Trigger: GTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTCC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACGGGCTAGAGGACTGGTaGTCTGAAGATCCAGGCGAC +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDGLEDW*SEDPGD
Trigger: GTCGCCTGGATCTTCAGACAACCAGTCCTCTAGCCC...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGCTGTGACAGTGGAGTaGCTGCCTAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDAVTVE*LPRLRP
Trigger: GGGCCTCAGCCTAGGCAGCAACTCCACTGTCACAGC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATACTGCGTCTGGTTCTGTaGGGGTTGGGCCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: LFHCLQGPARGGPVGTVILRLVL*GLGQGC
Trigger: ACAACCTTGGCCCAACCCCAACAGAACCAGACGCAG...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACTGCGTCTGGTTCTGTaGGGGTTGGGCCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGELRLVL*GLGQGC
Trigger: ACAACCTTGGCCCAACCCCAACAGAACCAGACGCAG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDISTRL*ERGGRC
Trigger: GCATCGGCCACCCCTTTCCAACAGCCGAGTGGATAT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS GCA 90 bp TCCATGAGACCCATATCCACTCGGCTGTTGGAAAGGGGTGGCCGATaGATTCACACTGACATTCACACCATGCTGCTTGGAAGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: SMRPISTRLLERGGR*IHTDIHTMLLGRGR
Trigger: CCTACCTCTTCCAAGCAGCATGGTGTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATATGGGTCTCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS GCA 90 bp TTCTGCCTCTTTCTGTTCCTCTTCCAGAAGGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCTGACCTCGAAACTCTCGTCCACGGC +
Preference number: 5 (lower is better)
Translates to: FCLFLFLFQKALHSW*HPIHFPDLETLVHG
Trigger: GCCGTGGACGAGAGTTTCGAGGTCAGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTCTGGAAGAGGAACAGAAAGAGGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS CCA 90 bp TCTTTGCCTGAGTCAGGTCCTTTTGGGGTGATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTGTGGATCTCTGTTCATAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: SLPESGPFGVMKRWS*GTAESVWISVHKEG
Trigger: GCCCTCTTTATGAACAGAGATCCACACAGACTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCCAAAAGGACCTGACTCAGGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 90 bp CCCTTCTGCCTCTTTCTGTTCCTCTTCCAGAAGGCCCTCCACTCTTaGTGCCATCCAATCCATTTTCCTGACCTCGAAACTCTCGTCCAC +
Preference number: 5 (lower is better)
Translates to: PFCLFLFLFQKALHS*CHPIHFPDLETLVH
Trigger: GTGGACGAGAGTTTCGAGGTCAGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTCTGGAAGAGGAACAGAAAGAGGCAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS-3UTR CAA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHCLVLV*RLFPVS
Trigger: GGAAACTGGGAACAACCTCAAAACCAAAACCAGACA...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTCTTTGCCTTCCTCATaGGATTCCGTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLSLPSS*DSVWPP
Trigger: TGGTGGCCAGACGGAATCCAATGAGGAAGGCAAAGA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCGAAGGCCCTCCACTCTaGGTGCCATCCAATCCATTT +
Preference number: 5 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAEGPPL*VPSNPF
Trigger: AAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTC...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEQLSQG*GSLELL
Trigger: GAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACCCGATGTGGATTTGCTaGGCAGAGGAGAAGACGGAG +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDPMWIC*AEEKTE
Trigger: CTCCGTCTTCTCCTCTGCCAAGCAAATCCACATCGG...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGGGGCTAGAGGACTGGTaGTCTGAAGATCCAGGCGAC +
Preference number: 5 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRGLEDW*SEDPGD
Trigger: GTCGCCTGGATCTTCAGACAACCAGTCCTCTAGCCC...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGTATACAGGCTACTaGGAGCCTGGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPWYTGY*EPGLKR
Trigger: CCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCA...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTGGTATACAGGCTACTaGGAGCCTGGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLWYTGY*EPGLKR
Trigger: CCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGGTTGTCGACTGAATaGGGCCGCTCTGATAACCAG +
Preference number: 5 (lower is better)
Translates to: SSKAQKVSTNSFPQATQARLSTE*GRSDNQ
Trigger: CTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCT...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLFGRYR*STELGR
Trigger: GCGGCCCAATTCAGTCGACAACCTATACCTCCCAAA...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCCTGGTTCTGTTGGGGTaGGGCCAAGGTTGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: VTWMSSLVISATLAHPSPLVLLG*GQGCGR
Trigger: CCGGCCACAACCTTGGCCCAACCCCAACAGAACCAG...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATCTGCGTCTGGTTCTGTaGGGGTTGGGCCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHLRLVL*GLGQGC
Trigger: ACAACCTTGGCCCAACCCCAACAGAACCAGACGCAG...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACTGCGTCTGGTTCTGTaGGGGTTGGGCCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTLRLVL*GLGQGC
Trigger: ACAACCTTGGCCCAACCCCAACAGAACCAGACGCAG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: EDFILFHCLQGPARGGPVISTRL*ERGGRC
Trigger: GCATCGGCCACCCCTTTCCAACAGCCGAGTGGATAT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHISTRL*ERGGRC
Trigger: GCATCGGCCACCCCTTTCCAACAGCCGAGTGGATAT...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGGCAGCTGTGGCCGGATaGATGGGGCCCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGAAVAG*MGPPLP
Trigger: AGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTGC...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGCAGCTGTGGCCGGATaGATGGGGCCCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEAAVAG*MGPPLP
Trigger: AGGAAGTGGGGGCCCCATCAATCCGGCCACAGCTGC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACAACACAGCCCCCAGCCTaGGGCCAAATTAGCTCTCAG +
Preference number: 5 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTTQPPA*GQISSQ
Trigger: CTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTGT...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGCTGCACCGCTTGAACTaGAAATGGGTAAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWLHRLN*KWVRQG
Trigger: ACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAG...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS TCA 90 bp CAGAGGCTGGGCCAGAGAAGGAGCCTGAGACGGATCCAGATTAGATaGATCATTCTCCATTGTAGATGGTGTCTTCCCCAGCAGAACAGC +
Preference number: 5 (lower is better)
Translates to: QRLGQRRSLRRIQIR*IILHCRWCLPQQNS
Trigger: GCTGTTCTGCTGGGGAAGACACCATCTACAATGGAGAATGATTCATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGCCCAGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCTGTTGACATCTCCATaGCAGTCATGCAAAGCAATC +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQLLTSP*QSCKAI
Trigger: GATTGCTTTGCATGACTGCAATGGAGATGTCAACAG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATTCTTTGCCTTCCTCATaGGATTCCGTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNSLPSS*DSVWPP
Trigger: TGGTGGCCAGACGGAATCCAATGAGGAAGGCAAAGA...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATCTTTGCCTTCCTCATaGGATTCCGTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTSLPSS*DSVWPP
Trigger: TGGTGGCCAGACGGAATCCAATGAGGAAGGCAAAGA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACGAAGGCCCTCCACTCTaGGTGCCATCCAATCCATTT +
Preference number: 5 (lower is better)
Translates to: KATAGVCIDASKVLHRLNEGPPL*VPSNPF
Trigger: AAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTC...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATCAAAGTGGCCAGTGTaGTTCCACGTATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTSKWPV*FHVLPL
Trigger: CAGCGGCAATACGTGGAACAACACTGGCCACTTTGA...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGGCAGTCTTGAATaGCTCCAAGAACTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: KATAGVCIDASKVLHRLNLGSLE*LQELGA
Trigger: GGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAA...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAGGGCTTGGGCAGTCTaGAATTGCTCCAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTRAWAV*NCSKNW
Trigger: CCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACAGGGCTTGGGCAGTCTaGAATTGCTCCAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: KATAGVCIDASKVLHRLNRAWAV*NCSKNW
Trigger: CCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTCCGATGTGGATTTGCTaGGCAGAGGAGAAGACGGAG +
Preference number: 5 (lower is better)
Translates to: EDFILFHCLQGPARGGPVPMWIC*AEEKTE
Trigger: CTCCGTCTTCTCCTCTGCCAAGCAAATCCACATCGG...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGGGAGCCGATGTGGATTaGCTTGGCAGAGGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRGADVD*LGRGED
Trigger: GTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTCC...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGGGCTAGAGGACTGGTaGTCTGAAGATCCAGGCGAC +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDGLEDW*SEDPGD
Trigger: GTCGCCTGGATCTTCAGACAACCAGTCCTCTAGCCC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HAFQKSKATAGVCIDASKYLEPG*KRRSWW
Trigger: CCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTA...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAGGTTGTCGACTGAATaGGGCCGCTCTGATAACCAG +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDRLSTE*GRSDNQ
Trigger: CTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDFGRYR*STELGR
Trigger: GCGGCCCAATTCAGTCGACAACCTATACCTCCCAAA...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCACCTCACTCTCCACACTaGTGTGCAAAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPPHSPH*CAKEWM
Trigger: CATCCACTCTTTTGCACACAAGTGTGGAGAGTGAGG...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATAAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: LFHCLQGPARGGPVGTVIRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAGCTGTGACAGTGGAGTaGCTGCCTAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEAVTVE*LPRLRP
Trigger: GGGCCTCAGCCTAGGCAGCAACTCCACTGTCACAGC...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATAAGGACTGCTGGGTTTaGGAGTACACAGAACCCGAG +
Preference number: 5 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNKDCWV*EYTEPE
Trigger: CTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCTT...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGACCGGAATGAAAACCTaGTTTCTCAAAGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQTGMKT*FLKGLL
Trigger: CAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGT...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCAGGGCTGAAGGCAAGTaGAAGGAAGCAGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPRAEGK*KEAAGV
Trigger: TACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCT...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGGCTGGTCTGGCTACGTaGCCCGCTGCCCGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGAGLAT*PAARLA
Trigger: GGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAGC...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGGGCCAAAGTTTCATAATCTaGAATGCAAGAGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FQAEKPSQKMGPGEEGQGQSFII*NARGEK
Trigger: CTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTG...GCCCTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp CAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCATGGTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: QKPRRYPPTHFPKPRRPWCLVLV*RLFPVS
Trigger: GGAAACTGGGAACAACCTCAAAACCAAAACCAGACA...CCATGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGCGGTCTCGATTTTCTTaGCCTTCCTCATTGGATTCC +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLRSRFS*PSSLDS
Trigger: GGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCG...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGAAGGCCCTCCACTCTaGGTGCCATCCAATCCATTT +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHEGPPL*VPSNPF
Trigger: AAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAAGGTTCCCATTCCTaGAGCAGAAAACCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLKGSHS*SRKPSS
Trigger: GGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTTT...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCTCAAAGTGGCCAGTGTaGTTCCACGTATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTSKWPV*FHVLPL
Trigger: CAGCGGCAATACGTGGAACAACACTGGCCACTTTGA...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATTCAAAGTGGCCAGTGTaGTTCCACGTATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHSKWPV*FHVLPL
Trigger: CAGCGGCAATACGTGGAACAACACTGGCCACTTTGA...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTATTGGGCAGTCTTGAATaGCTCCAAGAACTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVLGSLE*LQELGA
Trigger: GGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAA...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLYLEPG*KRRSWW
Trigger: CCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTA...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCAGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: VQKPRRYPPTHFPKPRRPALSII*GGIGCR
Trigger: TCGACAACCTATACCTCCCAAAATAATGCTCAGGGC...TGGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLALSII*GGIGCR
Trigger: TCGACAACCTATACCTCCCAAAATAATGCTCAGGGC...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAACCTCACTCTCCACACTaGTGTGCAAAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEPHSPH*CAKEWM
Trigger: CATCCACTCTTTTGCACACAAGTGTGGAGAGTGAGG...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCTGTTGGGCTGATATATGTTTGGGGGTCCCACCTCCCCGCCTCATCCGTACACAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: AVGLIYVWGSHLPASSVHNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...GTGTACGGATGAGGCGGGGAGGTGGGACCCCCAAACATATATCAGCCCAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCCTGCGTCTGGTTCTGTaGGGGTTGGGCCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: VTWMSSLVISATLAHPSPLRLVL*GLGQGC
Trigger: ACAACCTTGGCCCAACCCCAACAGAACCAGACGCAG...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp CAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCCCACTCCAAGATATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: QCTLYPICSLSSLTPLQDISTRL*ERGGRC
Trigger: GCATCGGCCACCCCTTTCCAACAGCCGAGTGGATAT...ATCTTGGAGTGGGGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAGGGCTGAAGGCAAGTaGAAGGAAGCAGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHRAEGK*KEAAGV
Trigger: TACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp ATCCCTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGTGGTCATCGACGAAATaGAGGATGTCCTGGCCATCC +
Preference number: 5 (lower is better)
Translates to: IPLPLLPEIGCRCSSFWRWSSTK*RMSWPS
Trigger: GGATGGCCAGGACATCCTCAATTTCGTCGATGACCA...CCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAGGTGCTGCACCGCTaGAACTTGAAATGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: ATAGVCIDASKVLHRLNLKVLHR*NLKWVR
Trigger: TCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTT...CAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTGGGCTGATATATGTTaGGGGGTCCCACCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGWADIC*GVPPPR
Trigger: GCGGGGAGGTGGGACCCCCAAACATATATCAGCCCA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS TCA 90 bp GGAATCTCCTCACTGTGGCTCAAGCCACCCAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAGGAAGCTGCAGATACCGTTTCATTG +
Preference number: 5 (lower is better)
Translates to: GISSLWLKPPKEDEC*LVVVSKEAADTVSL
Trigger: CAATGAAACGGTATCTGCAGCTTCCTTACTGACGACAACCAATCAGCATTCATCCTCCTTGGGTGGCTTGAGCCACAGTGAGGAGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000495676.5
ENST00000613315.4
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGCCTGTGGCCGCTGCTaGTGCTGTGTCTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAACGRC*CCVWFW
Trigger: CCAAAACCAGACACAGCACAAGCAGCGGCCACAGGC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCCGGTCTCGATTTTCTTaGCCTTCCTCATTGGATTCC +
Preference number: 5 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPRSRFS*PSSLDS
Trigger: GGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCG...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACGGTCTCGATTTTCTTaGCCTTCCTCATTGGATTCC +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTRSRFS*PSSLDS
Trigger: GGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCG...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGAAGGCCCTCCACTCTaGGTGCCATCCAATCCATTT +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDEGPPL*VPSNPF
Trigger: AAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAAAAGGTTCCCATTCCTaGAGCAGAAAACCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEKGSHS*SRKPSS
Trigger: GGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTTT...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAAGGTTCCCATTCCTaGAGCAGAAAACCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDKGSHS*SRKPSS
Trigger: GGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTTT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CCTCACCCCACTCCAAGATTTAGTTCTGCCAGACGATACATGTTGCCTTCACTTTTGGGCAGTCTTGAATaGCTCCAAGAACTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PHPTPRFSSARRYMLPSLLGSLE*LQELGA
Trigger: GGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAA...AAGTGAAGGCAACATGTATCGTCTGGCAGAACTAAATCTTGGAGTGGGGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTTGGGCAGTCTTGAATaGCTCCAAGAACTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDLGSLE*LQELGA
Trigger: GGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITQLSQG*GSLELL
Trigger: GAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTG...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EMKICGGSFQSPGCESLRYLEPG*KRRSWW
Trigger: CCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAYLEPG*KRRSWW
Trigger: CCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTA...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: CFHSFQAEKPSQKMGPGEALSII*GGIGCR
Trigger: TCGACAACCTATACCTCCCAAAATAATGCTCAGGGC...TTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATGCTGTGACAGTGGAGTaGCTGCCTAGGCTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNAVTVE*LPRLRP
Trigger: GGGCCTCAGCCTAGGCAGCAACTCCACTGTCACAGC...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGC +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEISTRL*ERGGRC
Trigger: GCATCGGCCACCCCTTTCCAACAGCCGAGTGGATAT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACAGGGCTGAAGGCAAGTaGAAGGAAGCAGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDRAEGK*KEAAGV
Trigger: TACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCT...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACACTGCACCGCTTGAACTaGAAATGGGTAAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: FEGAAPLELEMGKTGSDTLHRLN*KWVRQG
Trigger: ACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAG...TGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS TCA 90 bp CCTAGGGCTGAAGGCAAGTTGAAGGAAGCAGCAGGAGTACCGGAATaGAAACCTTGTTTCTCAAAGGACTGCTGGGTTTTGGAGTACACA +
Preference number: 5 (lower is better)
Translates to: PRAEGKLKEAAGVPE*KPCFSKDCWVLEYT
Trigger: TGTGTACTCCAAAACCCAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGTACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000484819.1
CDS GCA 90 bp TCGTCCCATCATCTGGTTCAAAGTGGCCAGTGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGTTATCATCAGTATTGGCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSHHLVQSGQCCSTY*RCYCHSYHQYWLAL
Trigger: CAGAGCCAGCCAATACTGATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAACACTGGCCACTTTGAACCAGATGATGGGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS CCA 90 bp TTCAGTGCAAATTTATACACACACACAAAACACAGCCCCCAGCCTTaGGCCAAATTAGCTCTCAGCCGTCCAGAAATGCTTGTAAGGGGG +
Preference number: 5 (lower is better)
Translates to: FSANLYTHTKHSPQP*AKLALSRPEMLVRG
Trigger: CCCCCTTACAAGCATTTCTGGACGGCTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTGTTTTGTGTGTGTGTATAAATTTGCACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343815.10
ENST00000475373.1
ENST00000613315.4
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHVLCLV*VLRLFP
Trigger: TGGGAACAACCTCAAAACCAAAACCAGACACAGCAC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATGCCTGTGGCCGCTGCTaGTGCTGTGTCTGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNACGRC*CCVWFW
Trigger: CCAAAACCAGACACAGCACAAGCAGCGGCCACAGGC...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp AGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCGGGAGAAGAGGGTCAGCATTCATCCTGGTTCTaGCCTGTAATATCAATCAAT +
Preference number: 5 (lower is better)
Translates to: SFQAEKPSQKMGPGEEGQHSSWF*PVISIN
Trigger: ATTGATTGATATTACAGGCAAGAACCAGGATGAATG...CTGACCCTCTTCTCCCGGTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCCTGTTGACATCTCCATaGCAGTCATGCAAAGCAATC +
Preference number: 5 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPLLTSP*QSCKAI
Trigger: GATTGCTTTGCATGACTGCAATGGAGATGTCAACAG...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACTGTTGACATCTCCATaGCAGTCATGCAAAGCAATC +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTLLTSP*QSCKAI
Trigger: GATTGCTTTGCATGACTGCAATGGAGATGTCAACAG...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCTCACCGAACCACAGCTGGTTTaGATAAAGCCCCATGCATAC +
Preference number: 5 (lower is better)
Translates to: PSPEQCTLYPICSLSSLTEPQLV*IKPHAY
Trigger: GTATGCATGGGGCTTTATCAAAACCAGCTGTGGTTC...GGTGAGGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTAAAGGTTCCCATTCCTaGAGCAGAAAACCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EDFILFHCLQGPARGGPVKGSHS*SRKPSS
Trigger: GGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTTT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGCAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLQLSQG*GSLELL
Trigger: GAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTG...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGCCGATGTGGATTTGCTaGGCAGAGGAGAAGACGGAG +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGPMWIC*AEEKTE
Trigger: CTCCGTCTTCTCCTCTGCCAAGCAAATCCACATCGG...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATTGGTATACAGGCTACTaGGAGCCTGGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNWYTGY*EPGLKR
Trigger: CCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCA...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHALSII*GGIGCR
Trigger: TCGACAACCTATACCTCCCAAAATAATGCTCAGGGC...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAATGAATGCTGATTGGTaGTCGTCAGTAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTMNADW*SSVRKL
Trigger: CAGCTTCCTTACTGACGACAACCAATCAGCATTCAT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACATGAATGCTGATTGGTaGTCGTCAGTAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: CFEGAAPLELEMGKTGSDMNADW*SSVRKL
Trigger: CAGCTTCCTTACTGACGACAACCAATCAGCATTCAT...GTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: VTWMSSLVISATLAHPSPRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp TTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTGGTACAGTAATAACCGGAATGAAAACCTaGTTTCTCAAAGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: LFHCLQGPARGGPVGTVITGMKT*FLKGLL
Trigger: CAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGT...TATTACTGTACCAACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAAGGGCTGAAGGCAAGTaGAAGGAAGCAGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGRAEGK*KEAAGV
Trigger: TACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCT...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGATGGTCATCGACGAAATaGAGGATGTCCTGGCCATCC +
Preference number: 5 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGWSSTK*RMSWPS
Trigger: GGATGGCCAGGACATCCTCAATTTCGTCGATGACCA...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGGAGGAAATGAAGATTaGTGGTGGTTCTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNGGNED*WWFFPV
Trigger: GACTGGAAAGAACCACCACAAATCTTCATTTCCTCC...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAAGGTGCTGCACCGCTaGAACTTGAAATGGGTAAGA +
Preference number: 5 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVKVLHR*NLKWVR
Trigger: TCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTT...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS TCA 90 bp TGCTTCGAATTACTGAACACCAGAGGCTGGGCCAGAGAAGGAGCCTaGGACGGATCCAGATTAGATGAATCATTCTCCATTGTAGATGGT +
Preference number: 5 (lower is better)
Translates to: CFELLNTRGWAREGA*DGSRLDESFSIVDG
Trigger: ACCATCTACAATGGAGAATGATTCATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS TCA 90 bp CCTAGGGCTGAAGGCAAGTTGAAGGAAGCAGCAGGAGTACCGGAATaGAAACCTTGTTTCTCAAAGGACTGGGTTTTGGAGTACACAGAA +
Preference number: 5 (lower is better)
Translates to: PRAEGKLKEAAGVPE*KPCFSKDWVLEYTE
Trigger: TTCTGTGTACTCCAAAACCCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGTACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493867.1
CDS GCA 90 bp CTGGTTCAAAGTGGCCAGTGTTGTTCCACGTATTGCCGCTGCTATTaGCATAGTTATCATCAGTATTGGCTGGCTCTGCATAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: LVQSGQCCSTYCRCY*HSYHQYWLALHNQL
Trigger: CAGCTGATTATGCAGAGCCAGCCAATACTGATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAACACTGGCCACTTTGAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS CCA 90 bp GATCTTGGTCTCAGAAAGCTGGAAAACAGAGGGATTAGTCACTCTTaGTGTCAGGGATGCTACAGTCAGAAACTTGGCATAGGTAAGGGG +
Preference number: 5 (lower is better)
Translates to: DLGLRKLENRGISHS*CQGCYSQKLGIGKG
Trigger: CCCCTTACCTATGCCAAGTTTCTGACTGTAGCATCCCTGACACCAAGAGTGACTAATCCCTCTGTTTTCCAGCTTTCTGAGACCAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466173.1
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDVLCLV*VLRLFP
Trigger: TGGGAACAACCTCAAAACCAAAACCAGACACAGCAC...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTCTTTGCCTTCCTCATaGGATTCCGTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGSLPSS*DSVWPP
Trigger: TGGTGGCCAGACGGAATCCAATGAGGAAGGCAAAGA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATGAAGGCCCTCCACTCTaGGTGCCATCCAATCCATTT +
Preference number: 5 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYEGPPL*VPSNPF
Trigger: AAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTC...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGTCAAAGTGGCCAGTGTaGTTCCACGTATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLSKWPV*FHVLPL
Trigger: CAGCGGCAATACGTGGAACAACACTGGCCACTTTGA...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGGCTTGGGCAGTCTaGAATTGCTCCAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLRAWAV*NCSKNW
Trigger: CCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAGGGCTTGGGCAGTCTaGAATTGCTCCAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGRAWAV*NCSKNW
Trigger: CCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTCAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAQLSQG*GSLELL
Trigger: GAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTG...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGTGGTATACAGGCTACTaGGAGCCTGGCTTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLWYTGY*EPGLKR
Trigger: CCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCA...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCTCCTCTATAGGTTGTCGACTGAATaGGGCCGCTCTGATAACCAG +
Preference number: 5 (lower is better)
Translates to: KWSQLLLDPLHFPPNLLYRLSTE*GRSDNQ
Trigger: CTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCT...ATAGAGGAGATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGFGRYR*STELGR
Trigger: GCGGCCCAATTCAGTCGACAACCTATACCTCCCAAA...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GAAGATTTCATTTTATTCCACTGCCTTCAGGGGCCTGCTAGAGGAGGCCCAGTTATGAATGCTGATTGGTaGTCGTCAGTAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EDFILFHCLQGPARGGPVMNADW*SSVRKL
Trigger: CAGCTTCCTTACTGACGACAACCAATCAGCATTCAT...AACTGGGCCTCCTCTAGCAGGCCCCTGAAGGCAGTGGAATAAAATGAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCTACTGCCACTATaGAGACTGGAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLRLLPL*RLEETL
Trigger: CAGTGTCTCCTCCAGTCTCAATAGTGGCAGTAGCCT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDCLVLV*RLFPVS
Trigger: GGAAACTGGGAACAACCTCAAAACCAAAACCAGACA...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp AGGGGAAGGAAATCCCCTCAAGGACAAGATACTACTACCACATTAAGGTCAGGAGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RGRKSPQGQDTTTTLRSGVLCLV*VLRLFP
Trigger: TGGGAACAACCTCAAAACCAAAACCAGACACAGCAC...TCCTGACCTTAATGTGGTAGTAGTATCTTGTCCTTGAGGGGATTTCCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp CATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: HAFQKSKATAGVCIDASKVLCLV*VLRLFP
Trigger: TGGGAACAACCTCAAAACCAAAACCAGACACAGCAC...CTTCGAAGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AGTTCAAAAGCCCAGAAGGTATCCACCAACTCATTTCCCCAAGCCACGCAGGCCCATTCATCCTGGTTCTaGCCTGTAATATCAATCAAT +
Preference number: 5 (lower is better)
Translates to: SSKAQKVSTNSFPQATQAHSSWF*PVISIN
Trigger: ATTGATTGATATTACAGGCAAGAACCAGGATGAATG...GGCCTGCGTGGCTTGGGGAAATGAGTTGGTGGATACCTTCTGGGCTTTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTACCTTCCAGAAGAACATaGATAGCTCTGTTGACATCT +
Preference number: 5 (lower is better)
Translates to: GVCIDASKVLHRLNLKWVPSRRT*IALLTS
Trigger: AGATGTCAACAGAGCTATCAATGTTCTTCTGGAAGG...TACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATCCTTCCAGAAGAACATaGATAGCTCTGTTGACATCT +
Preference number: 5 (lower is better)
Translates to: SKVLHRLNLKWVRQGQTHPSRRT*IALLTS
Trigger: AGATGTCAACAGAGCTATCAATGTTCTTCTGGAAGG...ATGTGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTCAAAGTGGCCAGTGTaGTTCCACGTATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDASKWPV*FHVLPL
Trigger: CAGCGGCAATACGTGGAACAACACTGGCCACTTTGA...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: EMKICGGSFQSPGCESLRFGRYR*STELGR
Trigger: GCGGCCCAATTCAGTCGACAACCTATACCTCCCAAA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITALSII*GGIGCR
Trigger: TCGACAACCTATACCTCCCAAAATAATGCTCAGGGC...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGCCTCACTCTCCACACTaGTGTGCAAAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGPHSPH*CAKEWM
Trigger: CATCCACTCTTTTGCACACAAGTGTGGAGAGTGAGG...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GATTTCTGCGACTTTAGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: DFCDFSAPITRAVYTVPNNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...ATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCTAAAGTCGCAGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp AAAGCAACAGCAGGTGTGTGCATTGATGCTTCGAAGGTGCTGCACCGCTTGAACAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: KATAGVCIDASKVLHRLNNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...GTTCAAGCGGTGCAGCACCTTCGAAGCATCAATGCACACACCTGCTGTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACAAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGGGTGAGGGGAGCCAGACGATACATGTaGCCTTCACTTCTTTTTAGT +
Preference number: 5 (lower is better)
Translates to: FVVVLSSHQVVKVLGVRGARRYM*PSLLFS
Trigger: ACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGGC...TCCCCTCACCCCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCGGGTACAGGTGGTGTTaGGTTACATGGATGAGTTCT +
Preference number: 5 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITGYRWC*VTWMSS
Trigger: AGAACTCATCCATGTAACCAAACACCACCTGTACCC...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS GCA 90 bp CATCATCTGGTTCAAAGTGGCCAGTGTTGTTCCACGTATTGCCGCTaGTATTGCCATAGTTATCATCAGTATTGGCTGGCTCTGCATAAT +
Preference number: 5 (lower is better)
Translates to: HHLVQSGQCCSTYCR*YCHSYHQYWLALHN
Trigger: ATTATGCAGAGCCAGCCAATACTGATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAACACTGGCCACTTTGAACCAGATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS-3UTR CAA 90 bp CGCACCCATCACCCGAGCAGTGTACACTGTACCCAATATGTAGTCTTTCATCCCCATTCATCCTGGTTCTaGCCTGTAATATCAATCAAT +
Preference number: 5 (lower is better)
Translates to: RTHHPSSVHCTQYVVFHPHSSWF*PVISIN
Trigger: ATTGATTGATATTACAGGCAAGAACCAGGATGAATG...GGGATGAAAGACTACATATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GCTTCGAAGGTGCTGCACCGCTTGAACTTGAAATGGGTAAGACAGGGTCAGACACATTCATCCTGGTTCTaGCCTGTAATATCAATCAAT +
Preference number: 5 (lower is better)
Translates to: ASKVLHRLNLKWVRQGQTHSSWF*PVISIN
Trigger: ATTGATTGATATTACAGGCAAGAACCAGGATGAATG...TGTCTGACCCTGTCTTACCCATTTCAAGTTCAAGCGGTGCAGCACCTTCGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp TTTGATGCTGTTTCCATAGTTTCCAGGCTGAGAAGCCCTCTCAGAAGATGGGACCCTTCCAGAAGAACATaGATAGCTCTGTTGACATCT +
Preference number: 5 (lower is better)
Translates to: FDAVSIVSRLRSPLRRWDPSRRT*IALLTS
Trigger: AGATGTCAACAGAGCTATCAATGTTCTTCTGGAAGG...GTCCCATCTTCTGAGAGGGCTTCTCAGCCTGGAAACTATGGAAACAGCATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAAAAGGTTCCCATTCCTaGAGCAGAAAACCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEKGSHS*SRKPSS
Trigger: GGAGGAAGGTTTTCTGCTCAAGGAATGGGAACCTTT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATAGGGCTTGGGCAGTCTaGAATTGCTCCAAGAACTGG +
Preference number: 5 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNRAWAV*NCSKNW
Trigger: CCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCT...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCCGATGTGGATTTGCTaGGCAGAGGAGAAGACGGAG +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGPMWIC*AEEKTE
Trigger: CTCCGTCTTCTCCTCTGCCAAGCAAATCCACATCGG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGCCTCACTCTCCACACTaGTGTGCAAAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: EMKICGGSFQSPGCESLRPHSPH*CAKEWM
Trigger: CATCCACTCTTTTGCACACAAGTGTGGAGAGTGAGG...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTCCTCACTCTCCACACTaGTGTGCAAAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAPHSPH*CAKEWM
Trigger: CATCCACTCTTTTGCACACAAGTGTGGAGAGTGAGG...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp CATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGAGGCATAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: HTTGWGWYRNGTDMKLRHNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...ATGCCTCAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATAAGGACTGCTGGGTTTaGGAGTACACAGAACCCGAG +
Preference number: 5 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNKDCWV*EYTEPE
Trigger: CTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCTT...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATACCGGAATGAAAACCTaGTTTCTCAAAGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNTGMKT*FLKGLL
Trigger: CAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGT...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS GCA 90 bp ATTGCCGCTGCTATTGCCATAGTTATCATCAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAAGGTTCCCATTCCTTGAGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: IAAAIAIVIISIGWL*IISWVKGSHSLSRK
Trigger: TTTTCTGCTCAAGGAATGGGAACCTTTAACCCAGCTGATTATGCAGAGCCAGCCAATACTGATGATAACTATGGCAATAGCAGCGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS GCA 90 bp AGAAAGCTGGAAAACAGAGGGATTAGTCACTCTTGGTGTCAGGGATaGTACAGTCAGAAACTTGGCATAGGTAAGGGGAATTCAACATCA +
Preference number: 5 (lower is better)
Translates to: RKLENRGISHSWCQG*YSQKLGIGKGNSTS
Trigger: TGATGTTGAATTCCCCTTACCTATGCCAAGTTTCTGACTGTAGCATCCCTGACACCAAGAGTGACTAATCCCTCTGTTTTCCAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466173.1
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDAVLCLV*VLRLFP
Trigger: TGGGAACAACCTCAAAACCAAAACCAGACACAGCAC...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp GGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCCTTCCAGAAGAACATaGATAGCTCTGTTGACATCT +
Preference number: 5 (lower is better)
Translates to: GYMDEFFSDFCDFSAPITPSRRT*IALLTS
Trigger: AGATGTCAACAGAGCTATCAATGTTCTTCTGGAAGG...GGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAGGTTGTCGACTGAATaGGGCCGCTCTGATAACCAG +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGRLSTE*GRSDNQ
Trigger: CTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAATGAATGCTGATTGGTaGTCGTCAGTAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEMNADW*SSVRKL
Trigger: CAGCTTCCTTACTGACGACAACCAATCAGCATTCAT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp TTTTCTTTGAAATGGTCTCAGCTCCTTCTTGATCCTCTCCATTTTCCACCCAATCCTCACTCTCCACACTaGTGTGCAAAAGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: FSLKWSQLLLDPLHFPPNPHSPH*CAKEWM
Trigger: CATCCACTCTTTTGCACACAAGTGTGGAGAGTGAGG...ATTGGGTGGAAAATGGAGAGGATCAAGAAGGAGCTGAGACCATTTCAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAAGGACTGCTGGGTTTaGGAGTACACAGAACCCGAG +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGKDCWV*EYTEPE
Trigger: CTCGGGTTCTGTGTACTCCAAAACCCAGCAGTCCTT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGACCGGAATGAAAACCTaGTTTCTCAAAGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLTGMKT*FLKGLL
Trigger: CAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGT...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAAACCGGAATGAAAACCTaGTTTCTCAAAGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLETGMKT*FLKGLL
Trigger: CAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGT...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGAGGGCTGAAGGCAAGTaGAAGGAAGCAGCAGGAGTA +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGRAEGK*KEAAGV
Trigger: TACTCCTGCTGCTTCCTTCAACTTGCCTTCAGCCCT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
CDS-3UTR CAA 90 bp GTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCACCCGCCAGACGATACATGTaGCCTTCACTTCTTTTTAGT +
Preference number: 5 (lower is better)
Translates to: VTWMSSLVISATLAHPSPARRYM*PSLLFS
Trigger: ACTAAAAAGAAGTGAAGGCAACATGTATCGTCTGGC...GGGTGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp TTGGTTACATGGATGAGTTCTTTAGTGATTTCTGCGACTTTAGCGCACCCATCAGGGTACAGGTGGTGTTaGGTTACATGGATGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LVTWMSSLVISATLAHPSGYRWC*VTWMSS
Trigger: AGAACTCATCCATGTAACCAAACACCACCTGTACCC...TGATGGGTGCGCTAAAGTCGCAGAAATCACTAAAGAACTCATCCATGTAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS GCA 90 bp TTCCAACCAGACACACAGATCAAAAATACGGCCACATTTACAGAATaGAAAACTCATATACATGGATTCCACAGAGCCAACTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: FQPDTQIKNTATFTE*KTHIHGFHRANCRA
Trigger: AGCCCTGCAGTTGGCTCTGTGGAATCCATGTATATGAGTTTTGCATTCTGTAAATGTGGCCGTATTTTTGATCTGTGTGTCTGGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489076.1
CDS-3UTR CAA 90 bp GAAATGAAGATTTGTGGTGGTTCTTTCCAGTCACCAGGTTGTGAAAGTCTTAGGTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: EMKICGGSFQSPGCESLRCLVLV*RLFPVS
Trigger: GGAAACTGGGAACAACCTCAAAACCAAAACCAGACA...CCTAAGACTTTCACAACCTGGTGACTGGAAAGAACCACCACAAATCTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271877.11
CDS-3UTR CAA 90 bp AAACTACATGCCTTCCAGAAATCAAAAGCAACAGCAGGTGTGTGCATTGATGCTTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: KLHAFQKSKATAGVCIDACLVLV*RLFPVS
Trigger: GGAAACTGGGAACAACCTCAAAACCAAAACCAGACA...AGCATCAATGCACACACCTGCTGTTGCTTTTGATTTCTGGAAGGCATGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343815.10
ENST00000613315.4
CDS-3UTR CAA 90 bp ATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGACAGACATGAAGCTGCCTTCCAGAAGAACATaGATAGCTCTGTTGACATCT +
Preference number: 5 (lower is better)
Translates to: IIHTTGWGWYRNGTDMKLPSRRT*IALLTS
Trigger: AGATGTCAACAGAGCTATCAATGTTCTTCTGGAAGG...CAGCTTCATGTCTGTCCCATTCCTATACCATCCCCACCCTGTTGTATGTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CTCTCCCTTTACTGCCTGAAATCGGCTGTAGATGTAGCAGTTTCTGGAGGAAATAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: LSLYCLKSAVDVAVSGGNNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...ATTTCCTCCAGAAACTGCTACATCTACAGCCGATTTCAGGCAGTAAAGGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGAATCCAATGGAAATCTaGTCTGAAGCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGNPMEI*SEASAS
Trigger: ACTTGCAGATGCTTCAGACAAGATTTCCATTGGATT...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp CCCATAGCAAAGTTTCATAATCTTGAATGCAAGAGGGGAGAAGGAATGGAAGGGCAAAGTTTCATAATCTaGAATGCAAGAGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PIAKFHNLECKRGEGMEGQSFII*NARGEK
Trigger: CTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTG...CCCTTCCATTCCTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTGCTATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACAAAGTTTCATAATCTaGAATGCAAGAGGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEQSFII*NARGEK
Trigger: CTTCTCCCCTCTTGCATTCAAGATTATGAAACTTTG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS CCA 90 bp GATCAAAAATACGGCCACATTTACAGAATGCAAAACTCATATACATaGATTCCACAGAGCCAACTGCAGGGCTTGAGTATGTGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: DQKYGHIYRMQNSYT*IPQSQLQGLSMCKF
Trigger: AAACTTGCACATACTCAAGCCCTGCAGTTGGCTCTGTGGAATCCATGTATATGAGTTTTGCATTCTGTAAATGTGGCCGTATTTTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489076.1
CDS-3UTR CAA 90 bp ACAGGAGGAAGCAAAGGAAGTGCAGGGCCCATAGCAAAGTTTCATAATCTTGAACATTCATCCTGGTTCTaGCCTGTAATATCAATCAAT +
Preference number: 5 (lower is better)
Translates to: TGGSKGSAGPIAKFHNLEHSSWF*PVISIN
Trigger: ATTGATTGATATTACAGGCAAGAACCAGGATGAATG...TTCAAGATTATGAAACTTTGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGCTGTTGACATCTCCATaGCAGTCATGCAAAGCAATC +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGLLTSP*QSCKAI
Trigger: GATTGCTTTGCATGACTGCAATGGAGATGTCAACAG...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS-3UTR CAA 90 bp GAAAATACAAATCCTATAATACATACAACAGGGTGGGGATGGTATAGGAATGGGATGAATGCTGATTGGTaGTCGTCAGTAAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ENTNPIIHTTGWGWYRNGMNADW*SSVRKL
Trigger: CAGCTTCCTTACTGACGACAACCAATCAGCATTCAT...CCCATTCCTATACCATCCCCACCCTGTTGTATGTATTATAGGATTTGTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS CCA 90 bp GGAGCCAAGAGACAAGCTAATTCAACAGAACATTCATCCTCATTCTaGGTTAGAACAGGACACGGATTATTTCCTTCAATTTTATTTAAG +
Preference number: 5 (lower is better)
Translates to: GAKRQANSTEHSSSF*VRTGHGLFPSILFK
Trigger: CTTAAATAAAATTGAAGGAAATAATCCGTGTCCTGTTCTAACCCAGAATGAGGATGAATGTTCTGTTGAATTAGCTTGTCTCTTGGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484696.1
CDS GCA 72 bp CGCTGCCGCTGCCGCCGCCGCCGCCGCCAACGCCGCTaGGCTCCCAACTTTACCTCAGTCTCCTCCACACTG +
Preference number: 6 (lower is better)
Translates to: RCRCRRRRRQRR*APNFTSVSSTL
Trigger: CAGTGTGGAGGAGACTGAGGTAAAGTTGGGAGCGCAGCGGCGTTGGCGGCGGCGGCGGCGGCAGCGGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412596.5
CDS GCA 72 bp CAGTATTTACAAGGTAGAATACCGGCCCCGCCGCGCTaGCGCTGCCGCCGCCGCCGCCGCCAACGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: QYLQGRIPAPPR*RCRRRRRQRRC
Trigger: GCAGCGGCGTTGGCGGCGGCGGCGGCGGCAGCGGCAGCGCGGCGGGGCCGGTATTCTACCTTGTAAATACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412596.5
ENST00000437652.5
CDS CAA 72 bp CTGGGGCTTCTGCGGGATGGAGCTGGTCTGGCTACGTaGCCCGCTGCCCGTCTGGCCATCCTGCTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LGLLRDGAGLAT*PAARLAILLQV
Trigger: CACCTGCAGCAGGATGGCCAGACGGGCAGCGGGCAACGTAGCCAGACCAGCTCCATCCCGCAGAAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361546.6
ENST00000428931.6
CDS CCA 72 bp CTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTGGTaGCCCACCACGTCGCCGACTATAGTCTCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: LSSTAGTSPPSW*PTTSPTIVSVP
Trigger: CGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS CAA 90 bp CCCCATGCATACACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTaGGTGGCCCACCACGTCGCCGACTATAGTCTCTGTCCCGGTCTC +
Preference number: 6 (lower is better)
Translates to: PHAYTLVHGWHLSPV*VAHHVADYSLCPGL
Trigger: GAGACCGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTGTATGCATGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000368504.5
CDS CAA 90 bp CCTGACCTCGAAACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTaGGTGGCCCACCACGTCGCCGACTATAGTCTCTGTCCCGGTCTC +
Preference number: 6 (lower is better)
Translates to: PDLETLVHGWHLSPV*VAHHVADYSLCPGL
Trigger: GAGACCGGGACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTTTCGAGGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS CCA 72 bp ACACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCGACTATAGTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: TLSSTAGTSPPS*WPTTSPTIVSV
Trigger: GACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000368504.5
CDS CCA 72 bp TGGGGAGGCCCGGGACCCCTGTATAGTATGGCAGGCTaGTGTAACTGTAGCCAGGAGGCAGCGCCGGGTTCA +
Preference number: 6 (lower is better)
Translates to: WGGPGPLYSMAG*CNCSQEAAPGS
Trigger: TGAACCCGGCGCTGCCTCCTGGCTACAGTTACACCAGCCTGCCATACTATACAGGGGTCCCGGGCCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CCA 72 bp GAAGGTGCTGGGGAGGCCCGGGACCCCTGTATAGTATaGCAGGCTGGTGTAACTGTAGCCAGGAGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: EGAGEARDPCIV*QAGVTVARRQR
Trigger: GCGCTGCCTCCTGGCTACAGTTACACCAGCCTGCCATACTATACAGGGGTCCCGGGCCTCCCCAGCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS GCA 72 bp GAGCCACAGGGAACACAGCAGGCCCATACTGGAAGGTaGTGGGGAGGCCCGGGACCCCTGTATAGTATGGCA +
Preference number: 6 (lower is better)
Translates to: EPQGTQQAHTGR*WGGPGPLYSMA
Trigger: TGCCATACTATACAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTATGGGCCTGCTGTGTTCCCTGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CCA 72 bp AAACTCTCGTCCACGGCTGGCACCTCTCCCCCGTCTTaGTGGCCCACCACGTCGCCGACTATAGTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: KLSSTAGTSPPS*WPTTSPTIVSV
Trigger: GACAGAGACTATAGTCGGCGACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS GCA 72 bp CCGGCCGCTCGTGTTATGTGCGCTTGTGTCTGTATGTaGTGTGTGCCCATGACTGGCGCTGGGGAGGGATTG +
Preference number: 6 (lower is better)
Translates to: PAARVMCACVCM*CVPMTGAGEGL
Trigger: CAATCCCTCCCCAGCGCCAGTCATGGGCACACAGCACATACAGACACAAGCGCACATAACACGAGCGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS CCA 72 bp TTGATAAAGCCCCATGCATACACTCTCGTCCACGGCTaGCACCTCTCCCCCGTCTTGGTGGCCCACCACGTC +
Preference number: 6 (lower is better)
Translates to: LIKPHAYTLVHG*HLSPVLVAHHV
Trigger: GACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTGTATGCATGGGGCTTTATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000368504.5
CDS CCA 72 bp TCACTGGCCGTGCTGGTATACAGGCTACTTGGAGCCTaGCTTGAAGAGGCGCTCGTGGTGGGGGTGGACTCA +
Preference number: 6 (lower is better)
Translates to: SLAVLVYRLLGA*LEEALVVGVDS
Trigger: TGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCAGCACGGCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 72 bp ATCCATTTTCCTGACCTCGAAACTCTCGTCCACGGCTaGCACCTCTCCCCCGTCTTGGTGGCCCACCACGTC +
Preference number: 6 (lower is better)
Translates to: IHFPDLETLVHG*HLSPVLVAHHV
Trigger: GACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGTGGACGAGAGTTTCGAGGTCAGGAAAATGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS TCA 72 bp CTGCTGAGCCGGCTGAGGGCTAGAGGACTGGTTGTCTaGAGATCCAGGCGACATCTGTGGAGCCGATGTGGA +
Preference number: 6 (lower is better)
Translates to: LLSRLRARGLVV*RSRRHLWSRCG
Trigger: TCCACATCGGCTCCACAGATGTCGCCTGGATCTTCAGACAACCAGTCCTCTAGCCCTCAGCCGGCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS TCA 72 bp AGCGCCGGGTTCAGGAATGTCTGCTGCGTGGTATGGTaGGTCTGCGTCTGGTTCTGTTGGGGTTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: SAGFRNVCCVVW*VCVWFCWGWAK
Trigger: CTTGGCCCAACCCCAACAGAACCAGACGCAGACTCACCATACCACGCAGCAGACATTCCTGAACCCGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000484696.1
ENST00000613315.4
CDS CCA 72 bp CAGGAGGCAGCGCCGGGTTCAGGAATGTCTGCTGCGTaGTATGGTGAGTCTGCGTCTGGTTCTGTTGGGGTT +
Preference number: 6 (lower is better)
Translates to: QEAAPGSGMSAA*YGESASGSVGV
Trigger: AACCCCAACAGAACCAGACGCAGACTCACCATACCACGCAGCAGACATTCCTGAACCCGGCGCTGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CAA 72 bp AGGATGATTCACTGGCCGTGCTGGTATACAGGCTACTaGGAGCCTGGCTTGAAGAGGCGCTCGTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RMIHWPCWYTGY*EPGLKRRSWWG
Trigger: CCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAATCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 90 bp TGCAGTGGCCTGTGGCCGCTGCTTGTGCTGTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCCCCGGGCTCGGTTAGTGCCCACCGA +
Preference number: 6 (lower is better)
Translates to: CSGLWPLLVLCLVLV*RLFPVSPGSVSAHR
Trigger: TCGGTGGGCACTAACCGAGCCCGGGGAAACTGGGAACAACCTCAAAACCAAAACCAGACACAGCACAAGCAGCGGCCACAGGCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000441890.5
ENST00000456325.5
ENST00000613315.4
CDS CAA 90 bp CCCTTCTCTGAGATTTCCTTTGCCGGCCGCTCGTGTTATGTGCGCTaGTGTCTGTATGTGCTGTGTGCCCATGACTGGCGCTGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: PFSEISFAGRSCYVR*CLYVLCAHDWRWGG
Trigger: CCCTCCCCAGCGCCAGTCATGGGCACACAGCACATACAGACACAAGCGCACATAACACGAGCGGCCGGCAAAGGAAATCTCAGAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS GCA 72 bp GTGTCGTCGAGCCCATGTCCCAAGAGGAGGTGGTGGTaGTTCCAGACTGAGAATGCTGAGCTGCCAACTGAG +
Preference number: 6 (lower is better)
Translates to: VSSSPCPKRRWW*FQTENAELPTE
Trigger: CTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACATGGGCTCGACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CCA 72 bp GGGATTGTGTCGTCGAGCCCATGTCCCAAGAGGAGGTaGTGGTGCTTCCAGACTGAGAATGCTGAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GIVSSSPCPKRR*WCFQTENAELP
Trigger: TGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACATGGGCTCGACGACACAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CCA 72 bp GGCTACTTGGAGCCTGGCTTGAAGAGGCGCTCGTGGTaGGGGTGGACTCATAATCAGAAAGGACAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: GYLEPGLKRRSW*GWTHNQKGQAL
Trigger: CAGAGCCTGTCCTTTCTGATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 72 bp AGTGGCCTGTGGCCGCTGCTTGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCAGTTTCCCCGGGCTCG +
Preference number: 6 (lower is better)
Translates to: SGLWPLLVLCLV*VLRLFPVSPGS
Trigger: CGAGCCCGGGGAAACTGGGAACAACCTCAAAACCAAAACCAGACACAGCACAAGCAGCGGCCACAGGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000441890.5
ENST00000456325.5
ENST00000613315.4
CDS CAA 72 bp TGGCCGTGCTGGTATACAGGCTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGGGGGTGGACTCATAAT +
Preference number: 6 (lower is better)
Translates to: WPCWYTGYLEPG*KRRSWWGWTHN
Trigger: ATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCAGCACGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 90 bp TTGTTCTGCAGTGGCCTGTGGCCGCTGCTTGTGCTGTGTCTGGTTTaGGTTTTGAGGTTGTTCCCAGTTTCCCCGGGCTCGGTTAGTGCC +
Preference number: 6 (lower is better)
Translates to: LFCSGLWPLLVLCLV*VLRLFPVSPGSVSA
Trigger: GGCACTAACCGAGCCCGGGGAAACTGGGAACAACCTCAAAACCAAAACCAGACACAGCACAAGCAGCGGCCACAGGCCACTGCAGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000441890.5
ENST00000456325.5
ENST00000613315.4
CDS TCA 72 bp AACCCGAGATATCTGGCACGCCCGTGTTACTGGAGGTaGCTGAAACACCTGGGGGAGGAGGAAACAGACAGG +
Preference number: 6 (lower is better)
Translates to: NPRYLARPCYWR*LKHLGEEETDR
Trigger: CCTGTCTGTTTCCTCCTCCCCCAGGTGTTTCAGTCACCTCCAGTAACACGGGCGTGCCAGATATCTCGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS TCA 72 bp AGGAAAGAGGGAAGGTGTGACCCAGGTCTGATGGGATaGGGACAACTGTGGCACAGGAGGAGAAGGGCACCA +
Preference number: 6 (lower is better)
Translates to: RKEGRCDPGLMG*GQLWHRRRRAP
Trigger: TGGTGCCCTTCTCCTCCTGTGCCACAGTTGTCCTCATCCCATCAGACCTGGGTCACACCTTCCCTCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS GCA 72 bp GGAGGTGGTGGTGCTTCCAGACTGAGAATGCTGAGCTaGCAACTGAGCCAGGGCTTGGGCAGTCTTGAATTG +
Preference number: 6 (lower is better)
Translates to: GGGGASRLRMLS*QLSQGLGSLEL
Trigger: CAATTCAAGACTGCCCAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CCA 72 bp GCCAGGGCTTGGGCAGTCTTGAATTGCTCCAAGAACTaGGAGCCTGTAGTACTGCCGCCTTTAGCTTCACCG +
Preference number: 6 (lower is better)
Translates to: ARAWAVLNCSKN*EPVVLPPLASP
Trigger: CGGTGAAGCTAAAGGCGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CCA 72 bp ACAGGCTACTTGGAGCCTGGCTTGAAGAGGCGCTCGTaGTGGGGGTGGACTCATAATCAGAAAGGACAGGCT +
Preference number: 6 (lower is better)
Translates to: TGYLEPGLKRRS*WGWTHNQKGQA
Trigger: AGCCTGTCCTTTCTGATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 72 bp ACTGCCACTATTGAGACTGGAGGAGACACTGACCACTaGGGGAGGTGCAGAGACTGTGCTGGATGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: TATIETGGDTDH*GRCRDCAGCGG
Trigger: TCCACCACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTCTCAATAGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS CAA 72 bp GAGATTTCCTTTGCCGGCCGCTCGTGTTATGTGCGCTaGTGTCTGTATGTGCTGTGTGCCCATGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: EISFAGRSCYVR*CLYVLCAHDWR
Trigger: GCGCCAGTCATGGGCACACAGCACATACAGACACAAGCGCACATAACACGAGCGGCCGGCAAAGGAAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS CCA 72 bp ATTGTGTCGTCGAGCCCATGTCCCAAGAGGAGGTGGTaGTGCTTCCAGACTGAGAATGCTGAGCTGCCAACT +
Preference number: 6 (lower is better)
Translates to: IVSSSPCPKRRW*CFQTENAELPT
Trigger: AGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACCACCACCTCCTCTTGGGACATGGGCTCGACGACACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CCA 72 bp TGTCTGAAGATCCAGGCGACATCTGTGGAGCCGATGTaGATTTGCTTGGCAGAGGAGAAGACGGAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CLKIQATSVEPM*ICLAEEKTEVE
Trigger: CTCCACCTCCGTCTTCTCCTCTGCCAAGCAAATCCACATCGGCTCCACAGATGTCGCCTGGATCTTCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 72 bp CCACTGGGGGAGGTGCAGAGACTGTGCTGGATGTGGTaGAAAAAGTGCTGGAGGAAGAATGGAGATTCGCCT +
Preference number: 6 (lower is better)
Translates to: PLGEVQRLCWMW*KKCWRKNGDSP
Trigger: AGGCGAATCTCCATTCTTCCTCCAGCACTTTTTCCACCACATCCAGCACAGTCTCTGCACCTCCCCCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS CAA 72 bp CTGTGGCCGCTGCTTGTGCTGTGTCTGGTTTTGGTTTaGAGGTTGTTCCCAGTTTCCCCGGGCTCGGTTAGT +
Preference number: 6 (lower is better)
Translates to: LWPLLVLCLVLV*RLFPVSPGSVS
Trigger: ACTAACCGAGCCCGGGGAAACTGGGAACAACCTCAAAACCAAAACCAGACACAGCACAAGCAGCGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000441890.5
ENST00000456325.5
ENST00000613315.4
CDS CAA 72 bp AGACTGAGAATGCTGAGCTGCCAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTCCAAGAACTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: RLRMLSCQLSQG*GSLELLQELGA
Trigger: GGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CAA 72 bp GAGAGGAAGGGGAGGCCAGAGAGCTCAGCAAGGTGTTaGTGTTTGTGTATCCCGATTTGTGACCGCGCAGTC +
Preference number: 6 (lower is better)
Translates to: ERKGRPESSARC*CLCIPICDRAV
Trigger: GACTGCGCGGTCACAAATCGGGATACACAAACACAAACACCTTGCTGAGCTCTCTGGCCTCCCCTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS CAA 90 bp AGAATGCTGAGCTGCCAACTGAGCCAGGGCTTGGGCAGTCTTGAATaGCTCCAAGAACTGGGAGCCTGTAGTACTGCCGCCTTTAGCTTC +
Preference number: 6 (lower is better)
Translates to: RMLSCQLSQGLGSLE*LQELGACSTAAFSF
Trigger: GAAGCTAAAGGCGGCAGTACTACAGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CAA 90 bp GGTGCTTCCAGACTGAGAATGCTGAGCTGCCAACTGAGCCAGGGCTaGGGCAGTCTTGAATTGCTCCAAGAACTGGGAGCCTGTAGTACT +
Preference number: 6 (lower is better)
Translates to: GASRLRMLSCQLSQG*GSLELLQELGACST
Trigger: AGTACTACAGGCTCCCAGTTCTTGGAGCAATTCAAGACTGCCCAAGCCCTGGCTCAGTTGGCAGCTCAGCATTCTCAGTCTGGAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS CAA 90 bp ATGATTCACTGGCCGTGCTGGTATACAGGCTACTTGGAGCCTGGCTaGAAGAGGCGCTCGTGGTGGGGGTGGACTCATAATCAGAAAGGA +
Preference number: 6 (lower is better)
Translates to: MIHWPCWYTGYLEPG*KRRSWWGWTHNQKG
Trigger: TCCTTTCTGATTATGAGTCCACCCCCACCACGAGCGCCTCTTCAAGCCAGGCTCCAAGTAGCCTGTATACCAGCACGGCCAGTGAATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS TCA 72 bp GCAGCTGTGGAGGTAGCCACTGCAGGTGACTTCTCCTaGAGGAACACCTCCATCATGGTTGAAGATGGGGTA +
Preference number: 6 (lower is better)
Translates to: AAVEVATAGDFS*RNTSIMVEDGV
Trigger: TACCCCATCTTCAACCATGATGGAGGTGTTCCTTCAGGAGAAGTCACCTGCAGTGGCTACCTCCACAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS GCA 72 bp ATTGAGACTGGAGGAGACACTGACCACTGGGGGAGGTaGAGAGACTGTGCTGGATGTGGTGGAAAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: IETGGDTDHWGR*RDCAGCGGKSA
Trigger: AGCACTTTTTCCACCACATCCAGCACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCCTCCAGTCTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS GCA 72 bp CCCATATCCACTCGGCTGTTGGAAAGGGGTGGCCGATaGATTCACACTGACATTCACACCATGCTGCTTGGA +
Preference number: 6 (lower is better)
Translates to: PISTRLLERGGR*IHTDIHTMLLG
Trigger: TCCAAGCAGCATGGTGTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CCA 72 bp GAGTCAGGTCCTTTTGGGGTGATGAAGAGATGGAGCTaGGGTACCGCCGAGTCTGTGTGGATCTCTGTTCAT +
Preference number: 6 (lower is better)
Translates to: ESGPFGVMKRWS*GTAESVWISVH
Trigger: ATGAACAGAGATCCACACAGACTCGGCGGTACCCCAGCTCCATCTCTTCATCACCCCAAAAGGACCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS GCA 72 bp TCTCTGAGATTTCCTTTGCCGGCCGCTCGTGTTATGTaGGCTTGTGTCTGTATGTGCTGTGTGCCCATGACT +
Preference number: 6 (lower is better)
Translates to: SLRFPLPAARVM*ACVCMCCVPMT
Trigger: AGTCATGGGCACACAGCACATACAGACACAAGCGCACATAACACGAGCGGCCGGCAAAGGAAATCTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS CCA 72 bp GTCCTCCATGCACTCGTCCCATCATCTGGTTCAAAGTaGCCAGTGTTGTTCCACGTATTGCCGCTGCTATTG +
Preference number: 6 (lower is better)
Translates to: VLHALVPSSGSK*PVLFHVLPLLL
Trigger: CAATAGCAGCGGCAATACGTGGAACAACACTGGCCACTTTGAACCAGATGATGGGACGAGTGCATGGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000613315.4
CDS CAA 72 bp AAAAGGTTTCAACCCGGCCCTTCTCTGAGATTTCCTTaGCCGGCCGCTCGTGTTATGTGCGCTTGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: KRFQPGPSLRFP*PAARVMCACVC
Trigger: ACAGACACAAGCGCACATAACACGAGCGGCCGGCAAAGGAAATCTCAGAGAAGGGCCGGGTTGAAACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS TCA 72 bp TCACTGTGGCTCAAGCCACCCAAGGAGGATGAATGCTaGTTGGTTGTCGTCAGTAAGGAAGCTGCAGATACC +
Preference number: 6 (lower is better)
Translates to: SLWLKPPKEDEC*LVVVSKEAADT
Trigger: GGTATCTGCAGCTTCCTTACTGACGACAACCAATCAGCATTCATCCTCCTTGGGTGGCTTGAGCCACAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000495676.5
ENST00000613315.4
CDS GCA 72 bp ATCTTCATTCCAATCTTCAGTCCCCCACTCCTCTGTTaGAGTCCTCCATGCACTCGTCCCATCATCTGGTTC +
Preference number: 6 (lower is better)
Translates to: IFIPIFSPPLLC*SPPCTRPIIWF
Trigger: GAACCAGATGATGGGACGAGTGCATGGAGGACTGCAACAGAGGAGTGGGGGACTGAAGATTGGAATGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000613315.4
CDS GCA 72 bp AATGTGTTCCCTGAAGCAGGCTGTGATATGGCAGTCTaGTTCGAATTACTGAACACCAGAGGCTGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: NVFPEAGCDMAV*FELLNTRGWAR
Trigger: TCTGGCCCAGCCTCTGGTGTTCAGTAATTCGAAGCAGACTGCCATATCACAGCCTGCTTCAGGGAACACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS GCA 72 bp CCTGTAGCACCTTCAACAGATTGTGTGGTCTGTAACTaGGTGGCCTGCACAGAACTGAAGCCATTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: PVAPSTDCVVCN*VACTELKPFFA
Trigger: GGCAAAGAATGGCTTCAGTTCTGTGCAGGCCACGCAGTTACAGACCACACAATCTGTTGAAGGTGCTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS GCA 72 bp TTTCTGTTCCTCTTCCAGAAGGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCTGACCTCGAACTCTCC +
Preference number: 6 (lower is better)
Translates to: FLFLFQKALHSW*HPIHFPDLELS
Trigger: GGAGAGTTCGAGGTCAGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTCTGGAAGAGGAACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437652.5
ENST00000613315.4
CDS CCA 72 bp ATGAAGAGATGGAGCTGGGGTACCGCCGAGTCTGTGTaGATCTCTGTTCATAAAGAGGGCCCTGAGCATTAT +
Preference number: 6 (lower is better)
Translates to: MKRWSWGTAESV*ISVHKEGPEHY
Trigger: ATAATGCTCAGGGCCCTCTTTATGAACAGAGATCCACACAGACTCGGCGGTACCCCAGCTCCATCTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 72 bp ACGAAATTGAGGATGTCCTGCTCCTCCTGCTGGCGCTaGCAACAGAGAATCATCTGCAAATATGGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: TKLRMSCSSCWR*QQRIICKYGSW
Trigger: CCAGCTACCATATTTGCAGATGATTCTCTGTTGCCAGCGCCAGCAGGAGGAGCAGGACATCCTCAATTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493867.1
CDS TCA 72 bp GGCCAGAGAAGGAGCCTGAGACGGATCCAGATTAGATaGATCATTCTCCATTGTAGATGGTGTCTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GQRRSLRRIQIR*IILHCRWCLPQ
Trigger: CTGGGGAAGACACCATCTACAATGGAGAATGATTCATCTAATCTGGATCCGTCTCAGGCTCCTTCTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS TCA 72 bp CTCAGCAAGGTGTTTGTGTTTGTGTATCCCGATTTGTaGCCGCGCAGTCTTTTCAAGTTCCCTGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LSKVFVFVYPDL*PRSLFKFPEAV
Trigger: CACAGCCTCAGGGAACTTGAAAAGACTGCGCGGTCACAAATCGGGATACACAAACACAAACACCTTGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484819.1
CDS GCA 72 bp TTTCTGTTCCTCTTCCAGAAGGCCCTCCACTCTTGGTaGCATCCAATCCATTTTCCTGACCTCGAAACTCTC +
Preference number: 6 (lower is better)
Translates to: FLFLFQKALHSW*HPIHFPDLETL
Trigger: GAGAGTTTCGAGGTCAGGAAAATGGATTGGATGGCACCAAGAGTGGAGGGCCTTCTGGAAGAGGAACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343815.10
ENST00000361546.6
ENST00000412596.5
ENST00000428931.6
ENST00000441890.5
ENST00000456325.5
CDS CCA 72 bp TGTGGCTCAAGCCACCCAAGGAGGATGAATGCTGATTaGTTGTCGTCAGTAAGGAAGCTGCAGATACCGTTT +
Preference number: 6 (lower is better)
Translates to: CGSSHPRRMNAD*LSSVRKLQIPF
Trigger: AAACGGTATCTGCAGCTTCCTTACTGACGACAACCAATCAGCATTCATCCTCCTTGGGTGGCTTGAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000495676.5
ENST00000613315.4
CDS CCA 72 bp ATCCCTCCCAGTCAGCGGAGTAGTGGGTGTGGGAAATaGGATGCTGTAGTAATCCTAGAAAAGAGGGGAAAA +
Preference number: 6 (lower is better)
Translates to: IPPSQRSSGCGK*DAVVILEKRGK
Trigger: TTTTCCCCTCTTTTCTAGGATTACTACAGCATCCCATTTCCCACACCCACTACTCCGCTGACTGGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475373.1
CDS CAA 72 bp GGCTCAAGCCACCCAAGGAGGATGAATGCTGATTGGTaGTCGTCAGTAAGGAAGCTGCAGATACCGTTTCAT +
Preference number: 6 (lower is better)
Translates to: GSSHPRRMNADW*SSVRKLQIPFH
Trigger: ATGAAACGGTATCTGCAGCTTCCTTACTGACGACAACCAATCAGCATTCATCCTCCTTGGGTGGCTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000495676.5
ENST00000613315.4
CDS CAA 72 bp AGTGTTGTATCCATGAGACCCATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGCATTCACACTGACATT +
Preference number: 6 (lower is better)
Translates to: SVVSMRPISTRL*ERGGRCIHTDI
Trigger: AATGTCAGTGTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATATGGGTCTCATGGATACAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000465855.5
ENST00000475373.1
ENST00000613315.4
CDS CAA 72 bp ACAGAGCCAACTGCAGGGCTTGAGTATGTGCAAGTTTaGGTATTCACAGGGGTCCATCTGAAGCCAGAGCTA +
Preference number: 6 (lower is better)
Translates to: TEPTAGLEYVQV*VFTGVHLKPEL
Trigger: TAGCTCTGGCTTCAGATGGACCCCTGTGAATACCAAAACTTGCACATACTCAAGCCCTGCAGTTGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489076.1
CDS CAA 90 bp TTTTCTTCCAGTGTTGTATCCATGAGACCCATATCCACTCGGCTGTaGGAAAGGGGTGGCCGATGCATTCACACTGACATTCACACCATG +
Preference number: 6 (lower is better)
Translates to: FSSSVVSMRPISTRL*ERGGRCIHTDIHTM
Trigger: CATGGTGTGAATGTCAGTGTGAATGCATCGGCCACCCCTTTCCAACAGCCGAGTGGATATGGGTCTCATGGATACAACACTGGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343815.10
ENST00000475373.1
ENST00000613315.4
CDS CAA 90 bp CTTCAGTGCAAATTTATACACACACACAAAACACAGCCCCCAGCCTaGGGCCAAATTAGCTCTCAGCCGTCCAGAAATGCTTGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: LQCKFIHTHKTQPPA*GQISSQPSRNACKG
Trigger: CCCCTTACAAGCATTTCTGGACGGCTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTGTTTTGTGTGTGTGTATAAATTTGCACTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343815.10
ENST00000475373.1
ENST00000613315.4
CDS TCA 72 bp AAAAGCCTGGCGCTTTGTAAAGGGGCTGTGCACTGCTaGATCACTTGGGTTCTTCAAATCATACTGCACCAG +
Preference number: 6 (lower is better)
Translates to: KSLALCKGAVHC*ITWVLQIILHQ
Trigger: CTGGTGCAGTATGATTTGAAGAACCCAAGTGATTCAGCAGTGCACAGCCCCTTTACAAAGCGCCAGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000466173.1
ENST00000613315.4
CDS GCA 72 bp AGTGGCCAGTGTTGTTCCACGTATTGCCGCTGCTATTaGCATAGTTATCATCAGTATTGGCTGGCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: SGQCCSTYCRCY*HSYHQYWLALH
Trigger: ATGCAGAGCCAGCCAATACTGATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAACACTGGCCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS GCA 72 bp CGCCCAGAAGATGTTGATGATGAAAGGGTATTCTGCTaGGTAGATAACGTGCTGCTGTGTTGTGTGGTGGTA +
Preference number: 6 (lower is better)
Translates to: RPEDVDDERVFC*VDNVLLCCVVV
Trigger: TACCACCACACAACACAGCAGCACGTTATCTACGCAGCAGAATACCCTTTCATCATCAACATCTTCTGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS CCA 72 bp AGGCCCAGTTGGTACAGTAATACTTATTCACCAAGCTaGTCATCGACGAAATTGAGGATGTCCTGGCCATCC +
Preference number: 6 (lower is better)
Translates to: RPSWYSNTYSPS*SSTKLRMSWPS
Trigger: GGATGGCCAGGACATCCTCAATTTCGTCGATGACCAGCTTGGTGAATAAGTATTACTGTACCAACTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271877.11
ENST00000433615.5
CDS CCA 72 bp AGGCCCAGTTGGTACAGTAATACTTATTCACCAAGCTaGTCATCGACGAAATTGAGGATGTCCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RPSWYSNTYSPS*SSTKLRMSCSS
Trigger: GGAGGAGCAGGACATCCTCAATTTCGTCGATGACCAGCTTGGTGAATAAGTATTACTGTACCAACTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493867.1
CDS CAA 72 bp GAGCATTATTTTGGGAGGTATAGGTTGTCGACTGAATaGGGCCGCTCTGATAACCAGACTCCTGACTCTGGT +
Preference number: 6 (lower is better)
Translates to: EHYFGRYRLSTE*GRSDNQTPDSG
Trigger: ACCAGAGTCAGGAGTCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCTATACCTCCCAAAATAATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 72 bp AAAGAGGGCCCTGAGCATTATTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGCTCTGATAACCAGACT +
Preference number: 6 (lower is better)
Translates to: KEGPEHYFGRYR*STELGRSDNQT
Trigger: AGTCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCTATACCTCCCAAAATAATGCTCAGGGCCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 72 bp GGATCTCTGTTCATAAAGAGGGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGACTGAATTGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: GSLFIKRALSII*GGIGCRLNWAA
Trigger: AGCGGCCCAATTCAGTCGACAACCTATACCTCCCAAAATAATGCTCAGGGCCCTCTTTATGAACAGAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 90 bp TCTGTTCATAAAGAGGGCCCTGAGCATTATTTTGGGAGGTATAGGTaGTCGACTGAATTGGGCCGCTCTGATAACCAGACTCCTGACTCT +
Preference number: 6 (lower is better)
Translates to: SVHKEGPEHYFGRYR*STELGRSDNQTPDS
Trigger: AGAGTCAGGAGTCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCTATACCTCCCAAAATAATGCTCAGGGCCCTCTTTATGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CAA 90 bp AGTCTGTGTGGATCTCTGTTCATAAAGAGGGCCCTGAGCATTATTTaGGGAGGTATAGGTTGTCGACTGAATTGGGCCGCTCTGATAACC +
Preference number: 6 (lower is better)
Translates to: SLCGSLFIKRALSII*GGIGCRLNWAALIT
Trigger: GGTTATCAGAGCGGCCCAATTCAGTCGACAACCTATACCTCCCAAAATAATGCTCAGGGCCCTCTTTATGAACAGAGATCCACACAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS TCA 72 bp GAAGGCAAGTTGAAGGAAGCAGCAGGAGTACCGGAATaGAAACCTTGTTTCTCAAAGGACTGCTGGGTTTTG +
Preference number: 6 (lower is better)
Translates to: EGKLKEAAGVPE*KPCFSKDCWVL
Trigger: CAAAACCCAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGTACTCCTGCTGCTTCCTTCAACTTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000484819.1
CDS TCA 72 bp GAAGGCAAGTTGAAGGAAGCAGCAGGAGTACCGGAATaGAAACCTTGTTTCTCAAAGGACTGGGTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: EGKLKEAAGVPE*KPCFSKDWVLE
Trigger: CTCCAAAACCCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGTACTCCTGCTGCTTCCTTCAACTTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493867.1
CDS GCA 72 bp GTTCAAAGTGGCCAGTGTTGTTCCACGTATTGCCGCTaGTATTGCCATAGTTATCATCAGTATTGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VQSGQCCSTYCR*YCHSYHQYWLA
Trigger: AGCCAGCCAATACTGATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAACACTGGCCACTTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS CCA 72 bp AGCATTATTTTGGGAGGTATAGGTTGTCGACTGAATTaGGCCGCTCTGATAACCAGACTCCTGACTCTGGTT +
Preference number: 6 (lower is better)
Translates to: SIILGGIGCRLN*AALITRLLTLV
Trigger: AACCAGAGTCAGGAGTCTGGTTATCAGAGCGGCCCAATTCAGTCGACAACCTATACCTCCCAAAATAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000613315.4
CDS CCA 72 bp AATTTATACACACACACAAAACACAGCCCCCAGCCTTaGGCCAAATTAGCTCTCAGCCGTCCAGAAATGCTT +
Preference number: 6 (lower is better)
Translates to: NLYTHTKHSPQP*AKLALSRPEML
Trigger: AAGCATTTCTGGACGGCTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTGTTTTGTGTGTGTGTATAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343815.10
ENST00000475373.1
ENST00000613315.4
CDS CAA 72 bp GTTGAAGGAAGCAGCAGGAGTACCGGAATGAAAACCTaGTTTCTCAAAGGACTGCTGGGTTTTGGAGTACAC +
Preference number: 6 (lower is better)
Translates to: VEGSSRSTGMKT*FLKGLLGFGVH
Trigger: GTGTACTCCAAAACCCAGCAGTCCTTTGAGAAACAAGGTTTTCATTCCGGTACTCCTGCTGCTTCCTTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000271877.11
ENST00000361546.6
ENST00000428595.1
ENST00000428931.6
ENST00000433615.5
ENST00000484819.1
CDS CAA 72 bp AAATTTATACACACACACAAAACACAGCCCCCAGCCTaGGGCCAAATTAGCTCTCAGCCGTCCAGAAATGCT +
Preference number: 6 (lower is better)
Translates to: KFIHTHKTQPPA*GQISSQPSRNA
Trigger: AGCATTTCTGGACGGCTGAGAGCTAATTTGGCCCAAGGCTGGGGGCTGTGTTTTGTGTGTGTGTATAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343815.10
ENST00000475373.1
ENST00000613315.4
CDS GCA 72 bp CATCTGGTTCAAAGTGGCCAGTGTTGTTCCACGTATTaGCGCTGCTATTGCCATAGTTATCATCAGTATTGG +
Preference number: 6 (lower is better)
Translates to: HLVQSGQCCSTY*RCYCHSYHQYW
Trigger: CCAATACTGATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAACACTGGCCACTTTGAACCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS GCA 72 bp TCTCCACACTTGTGTGCAAAAGAGTGGATGTCGAAGTaGGCCCAGAAGATGTTGATGATGAAAGGGTATTCT +
Preference number: 6 (lower is better)
Translates to: SPHLCAKEWMSK*AQKMLMMKGYS
Trigger: AGAATACCCTTTCATCATCAACATCTTCTGGGCGCACTTCGACATCCACTCTTTTGCACACAAGTGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000428931.6
ENST00000433615.5
ENST00000489076.1
ENST00000495676.5
ENST00000613315.4
CDS GCA 72 bp GAAAACAGAGGGATTAGTCACTCTTGGTGTCAGGGATaGTACAGTCAGAAACTTGGCATAGGTAAGGGGAAT +
Preference number: 6 (lower is better)
Translates to: ENRGISHSWCQG*YSQKLGIGKGN
Trigger: ATTCCCCTTACCTATGCCAAGTTTCTGACTGTAGCATCCCTGACACCAAGAGTGACTAATCCCTCTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466173.1
CDS TCA 72 bp TATTTACAAGGTAGAATACTGCGCCTATCCGGGCTTTaGCTCCTTATTCCAGGAGTAGGTGGGAGTTTAAGT +
Preference number: 6 (lower is better)
Translates to: YLQGRILRLSGL*LLIPGVGGSLS
Trigger: ACTTAAACTCCCACCTACTCCTGGAATAAGGAGTCAAAGCCCGGATAGGCGCAGTATTCTACCTTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343815.10
CDS TCA 72 bp AGCTATAAAAAGAGTAGCCACAACATCCTCACCTTTTaGAGAAGATCCTTTAGTCCCACTTACCGGGTAGGC +
Preference number: 6 (lower is better)
Translates to: SYKKSSHNILTF*RRSFSPTYRVG
Trigger: GCCTACCCGGTAAGTGGGACTAAAGGATCTTCTTCAAAAGGTGAGGATGTTGTGGCTACTCTTTTTATAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489076.1
CDS GCA 72 bp GCTATTGCCATAGTTATCATCAGTATTGGCTGGCTCTaGATAATCAGCTGGGTTAAAGGTTCCCATTCCTTG +
Preference number: 6 (lower is better)
Translates to: AIAIVIISIGWL*IISWVKGSHSL
Trigger: CAAGGAATGGGAACCTTTAACCCAGCTGATTATGCAGAGCCAGCCAATACTGATGATAACTATGGCAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS CCA 72 bp GTTATCATCAGTATTGGCTGGCTCTGCATAATCAGCTaGGTTAAAGGTTCCCATTCCTTGAGCAGAAAACCT +
Preference number: 6 (lower is better)
Translates to: VIISIGWLCIIS*VKGSHSLSRKP
Trigger: AGGTTTTCTGCTCAAGGAATGGGAACCTTTAACCCAGCTGATTATGCAGAGCCAGCCAATACTGATGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000456325.5
ENST00000613315.4
CDS GCA 72 bp GACACACAGATCAAAAATACGGCCACATTTACAGAATaGAAAACTCATATACATGGATTCCACAGAGCCAAC +
Preference number: 6 (lower is better)
Translates to: DTQIKNTATFTE*KTHIHGFHRAN
Trigger: GTTGGCTCTGTGGAATCCATGTATATGAGTTTTGCATTCTGTAAATGTGGCCGTATTTTTGATCTGTGTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489076.1
CDS CCA 72 bp CCATTGCAGTCATGCAAAGCAATCACACATTCATCCTaGTTCTTGCCTGTAATATCAATCAATTGTTTCACC +
Preference number: 6 (lower is better)
Translates to: PLQSCKAITHSS*FLPVISINCFT
Trigger: GGTGAAACAATTGATTGATATTACAGGCAAGAACCAGGATGAATGTGTGATTGCTTTGCATGACTGCAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000271877.11
ENST00000343815.10
ENST00000361546.6
ENST00000368504.5
ENST00000412596.5
ENST00000428931.6
ENST00000437652.5
ENST00000441890.5
ENST00000456325.5
ENST00000613315.4