RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBALD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153443

Ensembl transcript IDs: ENST00000283474.12, ENST00000587615.1, ENST00000587649.1, ENST00000590891.1, ENST00000590965.1, ENST00000591113.1, ENST00000591401.5, ENST00000591897.5

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTG +
Preference number: 1 (lower is better)
Translates to: GRRAAGGGMGEVWRG*RGCRGHRAAAATAV
Trigger: CACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
3UTR CCA 90 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTaGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: GAAGAMTLRVGSCVF*HQTCPCLARVRALP
Trigger: GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCA +
Preference number: 1 (lower is better)
Translates to: PGTQAALNHSMCRGR*GHDLACGQLRVLAP
Trigger: TGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR TCA 90 bp CCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTC +
Preference number: 1 (lower is better)
Translates to: PGRAEPLHVPGPLGP*PCVWAAACSGTRRV
Trigger: GACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 90 bp CCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGC +
Preference number: 1 (lower is better)
Translates to: PCAGAAGAMTLRVGS*VFWHQTCPCLARVR
Trigger: GCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGT +
Preference number: 1 (lower is better)
Translates to: KFCPPGTQAALNHSM*RGRWGHDLACGQLR
Trigger: ACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 90 bp GGCACCCCTGGGCTGGGCTGGGCAGGTGCGTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCT +
Preference number: 1 (lower is better)
Translates to: GTPGLGWAGASSKEG*VVSEVLSARHPGRA
Trigger: AGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAAC +
Preference number: 1 (lower is better)
Translates to: TLRVGSCVFWHQTCP*LARVRALPSRAPGN
Trigger: GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACAAGG +
Preference number: 1 (lower is better)
Translates to: CVWAAACSGTRRVPA*LESALSPPGLRGTR
Trigger: CCTTGTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 90 bp GGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTaGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCG +
Preference number: 1 (lower is better)
Translates to: GDVAVAAIGLPLPPL*KLSEALRRENMVRA
Trigger: CGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
3UTR CCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTGGGCTGGGCTGGGCAGGTGCGTCTT +
Preference number: 1 (lower is better)
Translates to: PQGAPSQGSAMSLPG*SSTAPLGWAGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 90 bp CACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCT +
Preference number: 1 (lower is better)
Translates to: HMRRGSAFPRVGVEA*RPPRSSKPGISNVS
Trigger: AGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 90 bp AATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCTaGGCAGGTGCGTCTTCGAAGGAAGGCTGCGTGGTCTCTGAAGTT +
Preference number: 1 (lower is better)
Translates to: NVSARVVLHGTPGLG*AGASSKEGCVVSEV
Trigger: AACTTCAGAGACCACGCAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 90 bp AGAGCGACACACGTAGAAATACACAGACACGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: RATHVEIHRHGHAHT*GEALHSLGWGSRPA
Trigger: GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTGTATTTCTACGTGTGTCGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 2 (lower is better)
Translates to: GAAGAMTLRVGSCVFWHQAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...CTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR TCA 90 bp CACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: HAHTCGEALHSLGWGSRPGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...AGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp AGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 2 (lower is better)
Translates to: RDQQCLCQGGPPRHPWAGAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...CCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 2 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 2 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR CCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGT +
Preference number: 2 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPMCRGR*GHDLAC
Trigger: ACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACAT...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGTCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: SGTRRVPAWLESALSPPGSEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...CCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR TCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR GCA 90 bp CCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 2 (lower is better)
Translates to: PCAGAAGAMTLRVGSCVFHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...GAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 2 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTTCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLASRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR CCA 90 bp CAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 2 (lower is better)
Translates to: QGSAMSLPGWSSTAPLGWTAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...CCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 2 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGRPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR TCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPRLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 2 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: AHTCGEALHSLGWGSRPAAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCC +
Preference number: 2 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGGHAHT*GEALHS
Trigger: GGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCC...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 2 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 2 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CACAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 2 (lower is better)
Translates to: HRHGHAHTCGEALHSLGWTAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...CCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKRLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVERLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR TCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAGACGGGAGAACATGGTaGGAGCGTCAGGGAAGTTGG +
Preference number: 2 (lower is better)
Translates to: RRVPAWLESALSPPGLRGDGRTW*ERQGSW
Trigger: CCAACTTCCCTGACGCTCTCACCATGTTCTCCCGTC...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR GCA 90 bp TGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 2 (lower is better)
Translates to: WAAACSGTRRVPAWLESAHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...CGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: CVFWHQTCPCLARVRALPAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 2 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPDQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 2 (lower is better)
Translates to: WAAACSGTRRVPAWLESARRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...CGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: QGSAMSLPGWSSTAPLGWMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...CCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: CVFWHQTCPCLARVRALPMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 2 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGDQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp TTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: FPQSFSLQGTATLADEGVVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...CACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: WGLTLTCKVQLPQELGCFPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...GAAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTAAGGGGGAAAGGAAGTaGATGCGGGTACCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: HAHTCGEALHSLGWGSRPKGERK*MRVPPG
Trigger: ACCTGGGGGTACCCGCATCCACTTCCTTTCCCCCTT...AGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCGCCGTGGGCCAGCTaGAGGCCGCAGAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLPPWAS*RPQSCW
Trigger: CCAGCAGCTCTGCGGCCTCCAGCTGGCCCACGGCGG...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR CCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 2 (lower is better)
Translates to: PRSSKPGISNVSARVVLHRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGGCCTCCATGGCAGGGTaGGCCCTGGGTTCTGAGGTG +
Preference number: 2 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWASMAG*ALGSEV
Trigger: CACCTCAGAACCCAGGGCCCACCCTGCCATGGAGGC...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR GCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 2 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp AGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: RDQQCLCQGGPPRHPWAGSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...CCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 2 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHRRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCCGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 2 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSRRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: SFPQSFSLQGTATLADEGLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACCGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 2 (lower is better)
Translates to: PRSSKPGISNVSARVVLHRRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 2 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRTAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CCA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRLHSLG*GSRPAG
Trigger: GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAG...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp TGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 2 (lower is better)
Translates to: WGLTLTCKVQLPQELGCFLRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...GAAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 2 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR GCA 90 bp GGAACTAGGTTGCTTCTGAAGAGCGACACACGTAGAAATACACAGACACGGCCAGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: GTRLLLKSDTRRNTQTRPAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...TGGCCGTGTCTGTGTATTTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR TCA 72 bp GCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCC +
Preference number: 3 (lower is better)
Translates to: AAGGGMGEVWRG*RGCRGHRAAAA
Trigger: GGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
3UTR GCA 72 bp CCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGG +
Preference number: 3 (lower is better)
Translates to: PPGTQAALNHSM*RGRWGHDLACG
Trigger: CCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CAA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 3 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CAA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 3 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 72 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GAAGAMTLRVGS*VFWHQTCPCLA
Trigger: AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 72 bp GCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGG +
Preference number: 3 (lower is better)
Translates to: AAACSGTRRVPA*LESALSPPGLR
Trigger: CCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 72 bp CAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTT +
Preference number: 3 (lower is better)
Translates to: QAALNHSMCRGR*GHDLACGQLRV
Trigger: AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 72 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCA +
Preference number: 3 (lower is better)
Translates to: AHTCGEALHSLG*GSRPAGPQGAP
Trigger: TGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CAA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 3 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR TCA 72 bp GCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACC +
Preference number: 3 (lower is better)
Translates to: AEPLHVPGPLGP*PCVWAAACSGT
Trigger: GGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 72 bp GTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCT +
Preference number: 3 (lower is better)
Translates to: VGSCVFWHQTCP*LARVRALPSRA
Trigger: AGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 72 bp AGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCCAAGCCAGGGATCAGC +
Preference number: 3 (lower is better)
Translates to: RGSAFPRVGVEA*RPPRSSKPGIS
Trigger: GCTGATCCCTGGCTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CAA 90 bp CTGGAGGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTGACAAGCTCTCGGAGGCCTaGAGACGGGAGAACATGGTG +
Preference number: 3 (lower is better)
Translates to: LEAAELLVAAWGKCGGGDKLSEA*RRENMV
Trigger: CACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTT...GTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
3UTR GCA 72 bp CCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PKELQARDQQCL*QGGPPRHPWAG
Trigger: CCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR CCA 72 bp GGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTaGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGC +
Preference number: 3 (lower is better)
Translates to: GAMTLRVGSCVF*HQTCPCLARVR
Trigger: GCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 72 bp GGGCTGGGCTGGGCAGGTGCGTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCA +
Preference number: 3 (lower is better)
Translates to: GLGWAGASSKEG*VVSEVLSARHP
Trigger: TGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CAA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCAAGCTCTCGGAGGCCTaGAGACGGGAGAACATGGTG +
Preference number: 3 (lower is better)
Translates to: CVFWHQTCPCLARVRALPKLSEA*RRENMV
Trigger: CACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTT...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590965.1
3UTR-3UTR CAA 90 bp AGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 3 (lower is better)
Translates to: RDQQCLCQGGPPRHPWAGAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...CCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR GCA 72 bp CACGTAGAAATACACAGACACGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCG +
Preference number: 3 (lower is better)
Translates to: HVEIHRHGHAHT*GEALHSLGWGS
Trigger: CGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTGTATTTCTACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
3UTR-3UTR CAA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 3 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGCGGGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTGGCCGCCGTGGGCCAGCTaGAGGCCGCAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGDVAVAAIGLPLPPLWPPWAS*RPQSCW
Trigger: CCAGCAGCTCTGCGGCCTCCAGCTGGCCCACGGCGG...CCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR GCA 90 bp GGCGGGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTGGTCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GGGDVAVAAIGLPLPPLWSRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...CCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CCA 90 bp GGCGGGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTGGCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGDVAVAAIGLPLPPLWPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...CCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCACCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GCGGGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTGGAGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: AGVTWLSRPSGCRCHRCGAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR TCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CTGGAGGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTGACGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEAAELLVAAWGKCGGGDVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...GTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR CCA 90 bp GCGGGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTGGACTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: AGVTWLSRPSGCRCHRCGLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR GCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PCAGAAGAMTLRVGSCVFVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...GAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGGTGCAGGGGAGGCATaGAGGCAGCCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHGAGEA*RQPQQA
Trigger: TGCCTGCTGGGGCTGCCTGCATGCCTCCCCTGCACC...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCACCGCAGAGCTGCTGGTaGCGGCATGGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPPQSCW*RHGGSV
Trigger: CACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGG...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACCCGCCGTGGGCCAGCTaGAGGCCGCAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNPPWAS*RPQSCW
Trigger: CCAGCAGCTCTGCGGCCTCCAGCTGGCCCACGGCGG...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCAGCCTCCATGGCAGGGTaGGCCCTGGGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPASMAG*ALGSEV
Trigger: CACCTCAGAACCCAGGGCCCACCCTGCCATGGAGGC...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHTAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GAAGAMTLRVGSCVFWHQGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...CTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCAGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGTCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALNHSMCRGRWGHDLACGSRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...CCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACTCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNSRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCTCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPSRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CTGGAGGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTGACTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: LEAAELLVAAWGKCGGGDWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...GTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR GCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCAGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGTRRVPAWLESALSPPGVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...CCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACGCCGGCCCTGCCGCTaGCCTTGTTCCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLARRPCR*PCSQAP
Trigger: AGGAGCCTGGGAACAAGGGCAGCGGCAGGGCCGGCG...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590891.1
ENST00000590965.1
CDS-3UTR CCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGCCGCCGTGGGCCAGCTaGAGGCCGCAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEPPWAS*RPQSCW
Trigger: CCAGCAGCTCTGCGGCCTCCAGCTGGCCCACGGCGG...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGACCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCAAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CTGGAGGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTGACACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LEAAELLVAAWGKCGGGDTAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...GTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR CCA 90 bp CTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LNHSMCRGRWGHDLACGQPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...CTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CTGGAGGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTGACCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LEAAELLVAAWGKCGGGDLHSLG*GSRPAG
Trigger: GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAG...GTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR CCA 90 bp GGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCCACCCGCCCTTGGCTaGCACCACGCTAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: GTRRVPAWLESALSPPGLPPALG*HHARHG
Trigger: CCCGTGCCTAGCGTGGTGCCAGCCAAGGGCGGGTGG...GAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp TCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGTRRVPAWLESALSPPGGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...CCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCTGGCACCAGCACCATaGCTGGGGGAGGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGLAPAP*LGEGGQ
Trigger: CTGCCCGCCCTCCCCCAGTCATGGTGCTGGTGCCAG...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGACCCTGGCTGGACTGCTaGGTGGGAGGGGTGAGTCGC +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGPWLDC*VGGVSR
Trigger: GCGACTCACCCCTCCCACTCAGCAGTCCAGCCAGGG...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CVFWHQTCPCLARVRALPVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCGGTGCAGGGGAGGCATaGAGGCAGCCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPGAGEA*RQPQQA
Trigger: TGCCTGCTGGGGCTGCCTGCATGCCTCCCCTGCACC...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACCACACCCGGGCCGCATaGCACACTGAGCACGGTGCG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNHTRAA*HTEHGA
Trigger: CGCACCGTGCTCAGTGTGGCATGCGGCCCGGGTGTG...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATACGCTAGGCACGGGATaGTCCACCGTCTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHTLGTG*STVSLH
Trigger: GTGGAGGGAGACGGTGGAGCATCCCGTGCCTAGCGT...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp CTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCGCCGGCCCTGCCGCTaGCCTTGTTCCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNHSMCRGRWGHDLACGQRRPCR*PCSQAP
Trigger: AGGAGCCTGGGAACAAGGGCAGCGGCAGGGCCGGCG...CTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590891.1
ENST00000590965.1
CDS-3UTR GCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGGTAAGGAGCTTCATTaGCCCAGAGGCCAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHGKELH*PRGQRP
Trigger: GGGGCGCTGGCCTCTGGGGCAATGAAGCTCCTTACC...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp CTGGAGGCCGCAGAGCTGCTGGTGGCGGCATGGGGGAAGTGTGGCGGGGGTGACAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LEAAELLVAAWGKCGGGDRPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...GTCACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGATCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGSEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCTCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPSEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCATCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLASEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWTAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWLHSLG*GSRPAG
Trigger: GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GAAGAMTLRVGSCVFWHQQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...CTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GCTGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AAWSLKFCPPGTQAALNHGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...GTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCGCACCCAGGCCGCGCTaGACCACTCCATGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGAPRPR*TTPCAG
Trigger: CCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGC...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGGCTGAGTGGGAGGGGTaGGTCGCGGTGCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SGTRRVPAWLESALSPPGAEWEG*VAVLRL
Trigger: GAGCCTCAGCACCGCGACTCACCCCTCCCACTCAGC...CCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCACCAGAGGAGAAGCCTTaGGATGAACCGACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPPEEKP*DEPTQP
Trigger: AGGCTGGGTCGGTTCATCTCAAGGCTTCTCCTCTGG...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp CCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCCCATCGGGCTGCCGCTaGCACCGCTGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PCAGAAGAMTLRVGSCVFPSGCR*HRCGSS
Trigger: AGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGG...GAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCCATCGGGCTGCCGCTaGCACCGCTGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWPSGCR*HRCGSS
Trigger: AGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GAAGAMTLRVGSCVFWHQLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...CTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGGGTGCAGGGGAGGCATaGAGGCAGCCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTGAGEA*RQPQQA
Trigger: TGCCTGCTGGGGCTGCCTGCATGCCTCCCCTGCACC...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCGCTGCCACCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAAAGCGGGTCGGGTCTaGGGCCCGGAGGGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PLPPLWKLSEALRRENMVKAGRV*GPEGAH
Trigger: GTGCGCCCCCTCCGGGCCGCAGACCCGACCCGCTTT...CACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGCAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587649.1
CDS-3UTR CCA 90 bp GGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCCTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GISNVSARVVLHGTPGLGLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...GCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGCCGCAGAGCTGCTGGTaGCGGCATGGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GAAGAMTLRVGSCVFWHQPQSCW*RHGGSV
Trigger: CACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGG...CTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGRPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPRPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCCGCCGTGGGCCAGCTaGAGGCCGCAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVGSCVFWHQTCPCLARVPPWAS*RPQSCW
Trigger: CCAGCAGCTCTGCGGCCTCCAGCTGGCCCACGGCGG...GACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTCCGCCGTGGGCCAGCTaGAGGCCGCAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLAPPWAS*RPQSCW
Trigger: CCAGCAGCTCTGCGGCCTCCAGCTGGCCCACGGCGG...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCTCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGSEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGLHSLG*GSRPAG
Trigger: GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAG...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTLHSLG*GSRPAG
Trigger: GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAG...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATCCAGCAAGCAGGGCCTaGCACCAAGGAGACAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHPASRA*HQGDKP
Trigger: AGGCTTGTCTCCTTGGTGCCAGGCCCTGCTTGCTGG...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: CVFWHQTCPCLARVRALPEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp AGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RDQQCLCQGGPPRHPWAGEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...CCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SGTRRVPAWLESALSPPGQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...CCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCCCTGGAAAAAGGCGCTaGGGGCTGTCGCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: AAACSGTRRVPAWLESALPGKRR*GLSRLA
Trigger: GGCGAGGCGCGACAGCCCTCAGCGCCTTTTTCCAGG...GAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGCCATCGGGCTGCCGCTaGCACCGCTGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKPSGCR*HRCGSS
Trigger: AGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGG...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCTCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RVGSCVFWHQTCPCLARVSRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...GACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: ALNHSMCRGRWGHDLACGHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...CCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNGHAHT*GEALHS
Trigger: GGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCC...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPGHAHT*GEALHS
Trigger: GGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCC...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCTGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACGGTGCAGGGGAGGCATaGAGGCAGCCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AAWSLKFCPPGTQAALNHGAGEA*RQPQQA
Trigger: TGCCTGCTGGGGCTGCCTGCATGCCTCCCCTGCACC...GTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCTCAGTGCCTAAGGCCTaGAGAGCCCTCCCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GTRRVPAWLESALSPPGLSVPKA*RALPLH
Trigger: GTGCAGGGGGAGGGCTCTGCAGGCCTTAGGCACTGA...GAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCAGGGATGTTGGTCTCCTaGAAAAAGGCGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPGMLVS*KKALRA
Trigger: AGCCCTCAGCGCCTTTTTCCAGGAGACCAACATCCC...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp GCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCCTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: AAACSGTRRVPAWLESALLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...GAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGCTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCCCGCAGAGCTGCTGGTaGCGGCATGGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPAPQSCW*RHGGSV
Trigger: CACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGG...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVERPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVGSCVFWHQTCPCLARVPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...GACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CVVSEVLSARHPGRAEPLPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...GAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCGGAGAAGGGGGTGTTaGAGTCCACAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVRRRGC*SPQGRL
Trigger: CAGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCG...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCGGAGAAGGGGGTGTTaGAGTCCACAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGRRRGC*SPQGRL
Trigger: CAGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCG...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCCGGAGAAGGGGGTGTTaGAGTCCACAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GISNVSARVVLHGTPGLGRRRGC*SPQGRL
Trigger: CAGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCG...GCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CVFWHQTCPCLARVRALPSEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTCCATGGCAGGGTaGGCCCTGGGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEASMAG*ALGSEV
Trigger: CACCTCAGAACCCAGGGCCCACCCTGCCATGGAGGC...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGGCCTCCATGGCAGGGTaGGCCCTGGGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SGTRRVPAWLESALSPPGASMAG*ALGSEV
Trigger: CACCTCAGAACCCAGGGCCCACCCTGCCATGGAGGC...CCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALNHSMCRGRWGHDLACGRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...CCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGMCRGR*GHDLAC
Trigger: ACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACAT...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCACGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: ARHPGRAEPLHVPGPLGPRRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...TGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: PCAGAAGAMTLRVGSCVFMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...GAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTCTGCATTCCCTAGGGTaGGGGTCGAGGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HAHTCGEALHSLGWGSRPLHSLG*GSRPAG
Trigger: GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAG...AGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCGGCGCTGGGAGGCGGTaGGAAGAGTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GTRRVPAWLESALSPPGLGAGRR*EESWSF
Trigger: GAAACTCCAGGACTCTTCCCACCGCCTCCCAGCGCC...GAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAGGCGCTGGGAGGCGGTaGGAAGAGTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGGAGRR*EESWSF
Trigger: GAAACTCCAGGACTCTTCCCACCGCCTCCCAGCGCC...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCGGAGCCCACGGTGCCTaGGGCCACGAGGCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGGAHGA*GHEAFP
Trigger: TGGGAAAGCCTCGTGGCCCCAGGCACCGTGGGCTCC...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
3UTR CAA 72 bp ACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: TTPCAGAAGAMT*RVGSCVFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCTGGAAAAAGGCGCTaGGGGCTGTCTCGAACTGCC +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAPGKRR*GLSRTA
Trigger: GGCAGTTCGAGACAGCCCTCAGCGCCTTTTTCCAGG...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000283474.12
ENST00000587615.1
CDS-3UTR TCA 90 bp CAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGSAMSLPGWSSTAPLGWQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...CCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCGGCCGCATGCCACACTaGGCACGGTGCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSGRMPH*ARCGHP
Trigger: TGGGTGCCCGCACCGTGCTCAGTGTGGCATGCGGCC...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCAGCCGGGACTCCTGCTaGCCCATCTCCAAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPSRDSC*PISKEV
Trigger: GACCTCTTTGGAGATGGGTCAGCAGGAGTCCCGGCT...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGACCTCCCTTATCTCTCTaGCTCCATGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGPPLSL*LHGRVG
Trigger: GCCCACCCTGCCATGGAGGCAGAGAGATAAGGGAGG...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCTCCCTTATCTCTCTaGCTCCATGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAPPLSL*LHGRVG
Trigger: GCCCACCCTGCCATGGAGGCAGAGAGATAAGGGAGG...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPAHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNLRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCATTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLALRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: LNHSMCRGRWGHDLACGQGHAHT*GEALHS
Trigger: GGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCC...CTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGGGCTCACACTAACATaGAAAGTCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHGLTLT*KVQLPQ
Trigger: CTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCC...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCCTCCCTCGGAACAGTaGCCGGGAAGTGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWPPSEQ*PGSGAE
Trigger: TTCTGCTCCACTTCCCGGGCACTGTTCCGAGGGAGG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGTGCCCCACCCAGCTCTaGTTCTGGCTGATCAAGGGG +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWCPTQL*FWLIKG
Trigger: CCCCTTGATCAGCCAGAAGCAGAGCTGGGTGGGGCA...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp TCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGCTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SEVLSARHPGRAEPLHVPLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...CGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CACAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGCTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: HRHGHAHTCGEALHSLGWLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...CCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCCGGAGAAGGGGGTGTTaGAGTCCACAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CVFWHQTCPCLARVRALPRRRGC*SPQGRL
Trigger: CAGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCG...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCTGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACGCCTCCATGGCAGGGTaGGCCCTGGGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: AAWSLKFCPPGTQAALNHASMAG*ALGSEV
Trigger: CACCTCAGAACCCAGGGCCCACCCTGCCATGGAGGC...GTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GISNVSARVVLHGTPGLGRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...GCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGMCRGR*GHDLAC
Trigger: ACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACAT...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: AAACSGTRRVPAWLESALMCRGR*GHDLAC
Trigger: ACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACAT...GAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGACGGCACCCCTGGGCTaGGCTGGGCAGGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: CVWAAACSGTRRVPAWLETAPLG*AGQVRL
Trigger: AAGACGCACCTGCCCAGCCCAGCCCAGGGGTGCCGT...CTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCAAGGAACAGCAACGCTaGCTGACGAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPKEQQR*LTRGWG
Trigger: TCCCCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTT...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCGCTGGGAGGCGGTaGGAAGAGTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPAGAGRR*EESWSF
Trigger: GAAACTCCAGGACTCTTCCCACCGCCTCCCAGCGCC...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGGGAACCTTGGGCAGTTaGGGTGGGTGGAGAAGACCC +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWGTLGS*GGWRRP
Trigger: GGGTCTTCTCCACCCACCCCAACTGCCCAAGGTTCC...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLAQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVRLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGRLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGACTCGCTTCCCCACCTaGGCCTCCCTCGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: QGSAMSLPGWSSTAPLGWTRFPT*ASLGTV
Trigger: CACTGTTCCGAGGGAGGCTCAGGTGGGGAAGCGAGT...CCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp CTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCATCCTGAAGGAGTCTaGGCCTGGTGGTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: LNHSMCRGRWGHDLACGQHPEGV*AWWWGS
Trigger: GGATCCCCACCACCAGGCTCAGACTCCTTCAGGATG...CTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCTGGAGGCCGCAGAGCTaGTGGTGGCGGCATGGGGGA +
Preference number: 4 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSWRPQS*WWRHGG
Trigger: TCCCCCATGCCGCCACCAGCAGCTCTGCGGCCTCCA...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPALRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGLRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNDQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: WAAACSGTRRVPAWLESAGHAHT*GEALHS
Trigger: GGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCC...CGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCGGTGCAGGGGAGGCATaGAGGCAGCCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCGAGEA*RQPQQA
Trigger: TGCCTGCTGGGGCTGCCTGCATGCCTCCCCTGCACC...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGGGGAAAGGAAGTGGATaGGGGTACCCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKGKGSG*GYPQVQ
Trigger: CTGCACCTGGGGGTACCCGCATCCACTTCCTTTCCC...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCGGGAAAGGAAGTGGATaGGGGTACCCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GISNVSARVVLHGTPGLGGKGSG*GYPQVQ
Trigger: CTGCACCTGGGGGTACCCGCATCCACTTCCTTTCCC...GCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGGGGTATTGGCGGGGGTaGACATCTCGAACTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWGYWRG*TSRTAS
Trigger: ACTGGCAGTTCGAGATGTGCACCCCCGCCAATACCC...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000591401.5
CDS-3UTR GCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACACAGGCAAGATTAAGTaGAGGACCCACGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNTGKIK*RTHGAG
Trigger: CCCGGCTCCGTGGGTCCTGCACTTAATCTTGCCTGT...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCCCTCCCAAGGGGAGATaGGTGGCTGGCCCATTCTCG +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGPPKGR*VAGPFS
Trigger: CGAGAATGGGCCAGCCACGCATCTCCCCTTGGGAGG...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCCTGCTGGTGGCGGCATaGGGGAAGTGTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSLLVAA*GKCGGG
Trigger: ACCCCCGCCACACTTCCCCCATGCCGCCACCAGCAG...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGCCGCAGAGCTGCTGGTaGCGGCATGGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SEVLSARHPGRAEPLHVPPQSCW*RHGGSV
Trigger: CACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGG...CGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CVWAAACSGTRRVPAWLERPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...CTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCAGACGTGTCCCTGCCTaGCTAGAGTCCGCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CVFWHQTCPCLARVRALPRRVPA*LESALS
Trigger: GGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: CVWAAACSGTRRVPAWLEMCRGR*GHDLAC
Trigger: ACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACAT...CTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WAAACSGTRRVPAWLESAMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...CGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGAAGGAACAGCAACGCTaGCTGACGAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTKEQQR*LTRGWG
Trigger: TCCCCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTT...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCAAGGAACAGCAACGCTaGCTGACGAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGKEQQR*LTRGWG
Trigger: TCCCCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTT...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCGGCGCTGGGAGGCGGTaGGAAGAGTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGGAGRR*EESWSF
Trigger: GAAACTCCAGGACTCTTCCCACCGCCTCCCAGCGCC...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACAAGGGGGAAAGGAAGTaGATGCGGGTACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TCPCLARVRALPSRAPGNKGERK*MRVPPG
Trigger: ACCTGGGGGTACCCGCATCCACTTCCTTTCCCCCTT...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGAAGGGGGAAAGGAAGTaGATGCGGGTACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ALNHSMCRGRWGHDLACGKGERK*MRVPPG
Trigger: ACCTGGGGGTACCCGCATCCACTTCCTTTCCCCCTT...CCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGCGACTAGGTGGCTCCTaGGTCCCCTCCCTTGCAACA +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTRLGGS*VPSLAT
Trigger: TGTTGCAAGGGAGGGGACCCAGGAGCCACCTAGTCG...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGGCAGTTGGGGTGGGTaGAGAAGACCCTTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGGSWGG*RRPFPC
Trigger: GCAGGGGAAGGGTCTTCTCCACCCACCCCAACTGCC...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGTGCTGAGGCTCAGTaGCTTGCCTGTCACCCCCAA +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPAGAEAQ*LACHPQ
Trigger: TTGGGGGTGACAGGCAAGCCACTGAGCCTCAGCACC...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTGGGGATGACCCTGGCTaGACTGCTGAGTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLAGDDPG*TAEWEG
Trigger: CCCCTCCCACTCAGCAGTCCAGCCAGGGTCATCCCC...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp CACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCGACGGGAGAACATGGTaGGAGCGTCAGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: HTCGEALHSLGWGSRPAGDGRTW*ERQGSW
Trigger: CCAACTTCCCTGACGCTCTCACCATGTTCTCCCGTC...GCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGGACGGGAGAACATGGTaGGAGCGTCAGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LNHSMCRGRWGHDLACGQDGRTW*ERQGSW
Trigger: CCAACTTCCCTGACGCTCTCACCATGTTCTCCCGTC...CTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGTCAGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLWKLSEALRRENMVRASEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...TGACGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR TCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGRLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCAGGCTGCGTGGTCTCTaGAGTTCTGTCCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CVFWHQTCPCLARVRALPRLRGL*SSVRQA
Trigger: TGCCTGGCGGACAGAACTTCAGAGACCACGCAGCCT...GGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGTCAGGGCCTGGAAAAAGGCGCTaGGGGCTGTCTCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LWKLSEALRRENMVRASGPGKRR*GLSPPA
Trigger: GGCGGGCGGAGACAGCCCTCAGCGCCTTTTTCCAGG...CCCTGACGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587649.1
CDS-3UTR TCA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACGGTGAGTCGCGGTGCTaGGGCTCAGTGGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHGESRC*GSVACL
Trigger: CAGGCAAGCCACTGAGCCTCAGCACCGCGACTCACC...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGCCTGGAAAAAGGCGCTaGGGGCTGTCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTPGKRR*GLSAGR
Trigger: TCTTCCTGCAGACAGCCCTCAGCGCCTTTTTCCAGG...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590891.1
ENST00000590965.1
CDS-3UTR TCA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTGGAGAAGCCTTGAGATaGACCGACCCAGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVGEALR*TDPASL
Trigger: GAGTGAGGCTGGGTCGGTTCATCTCAAGGCTTCTCC...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp CACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTCCTCCCTTATCTCTCTaGCTCCATGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HAHTCGEALHSLGWGSRPPPLSL*LHGRVG
Trigger: GCCCACCCTGCCATGGAGGCAGAGAGATAAGGGAGG...AGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGLRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCGCTGCCACCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPPLWKLSEALRRENMVAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...CACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR GCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKDQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCAGGGCTCACACTAACATaGAAAGTCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAGLTLT*KVQLPQ
Trigger: CTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCC...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGTGGGGATCCCCTGCTaGCCCACCCAGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HDLACGQLRVLAPDVSLPVGIPC*PTQLCF
Trigger: GAAGCAGAGCTGGGTGGGGCAGCAGGGGATCCCCAC...AGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGGGGATGTTGGTCTCCTaGAAAAAGGCGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWGMLVS*KKALRA
Trigger: AGCCCTCAGCGCCTTTTTCCAGGAGACCAACATCCC...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAGGCTGTAGGGGATGTTaGTCTCCTGGAAAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGGCRGC*SPGKRR
Trigger: GCGCCTTTTTCCAGGAGACCAACATCCCCTACAGCC...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp GCTGCCACCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGCCGCAGAGCTGCTGGTaGCGGCATGGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: AATAVEALGGLETGEHGEPQSCW*RHGGSV
Trigger: CACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGG...CTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CCA 90 bp GCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGTCAGGTCTGAGGTGGCCTGTTaGGGGGCCAGGGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AVEALGGLETGEHGESVRSEVAC*GARGGQ
Trigger: CTGGCCACCCCTGGCCCCCCAACAGGCCACCTCAGA...CCTGACGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR CCA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACATGTGCCGGGGCCGCTaGGGCCATGACCTTGCGTGT +
Preference number: 4 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHMCRGR*GHDLAC
Trigger: ACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACAT...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGATGTCTCTGCCAGGGTaGTCCTCCACGGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: CVWAAACSGTRRVPAWLEMSLPG*SSTAPL
Trigger: CAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACAT...CTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATCGGTGGGAAGAGTCCTaGAGTTTCCCACAATCCTTT +
Preference number: 4 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHRWEES*SFPQSF
Trigger: AAAGGATTGTGGGAAACTCCAGGACTCTTCCCACCG...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAAGGAGACAAGCCTaGGCTTTAGGCTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAPRRQA*ALGSLA
Trigger: AGCGAGTGAGCCTAAAGCCCAGGCTTGTCTCCTTGG...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCACCCAGCTCTGCTTCTaGCTGATCAAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPATQLCF*LIKGAT
Trigger: AGTGGCCCCCTTGATCAGCCAGAAGCAGAGCTGGGT...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp CACAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGCACCAGCACCATGACTaGGGGAGGGCGGGCAGTACA +
Preference number: 4 (lower is better)
Translates to: HRHGHAHTCGEALHSLGWHQHHD*GRAGST
Trigger: TGTACTGCCCGCCCTCCCCCAGTCATGGTGCTGGTG...CCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp GCTGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACCCAAGGGGAGATGCGTaGCTGGCCCATTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: AAWSLKFCPPGTQAALNHPRGDA*LAHSRK
Trigger: CTTCCGAGAATGGGCCAGCCACGCATCTCCCCTTGG...GTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp CAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGCCTGGAAAAAGGCGCTaGGGGCTGTCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QTRPRAHMRRGSAFPRVGPGKRR*GLSAGR
Trigger: TCTTCCTGCAGACAGCCCTCAGCGCCTTTTTCCAGG...CCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000590891.1
ENST00000590965.1
CDS-3UTR GCA 90 bp CTGCCACCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGACCATCGGGCTGCCGCTaGCACCGCTGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPPLWKLSEALRRENMVRPSGCR*HRCGSS
Trigger: AGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGG...TCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR GCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCGCTGGGCTGGGCAGGTaGGTCTTCGAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCAGLGR*VFEGRL
Trigger: CAGCCTTCCTTCGAAGACGCACCTGCCCAGCCCAGC...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGGCTCACACTAACATaGAAAGTCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AHTCGEALHSLGWGSRPAGLTLT*KVQLPQ
Trigger: CTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCC...GGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCGGGCTCACACTAACATaGAAAGTCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GISNVSARVVLHGTPGLGGLTLT*KVQLPQ
Trigger: CTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCC...GCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGCTGGGTCCCCTCCCTTaGAACAGTGACCTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKLGPLP*NSDLLR
Trigger: TCTTAGGAGGTCACTGTTGCAAGGGAGGGGACCCAG...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp AGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCAGACCTCCCCACCCTaGCCCGTTTCAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: RDQQCLCQGGPPRHPWAGQTSPP*PVSGDS
Trigger: AGAATCTCCTGAAACGGGGCAGGGTGGGGAGGTCTG...CCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp GACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCACCCCCAACCCTCACTaGTGTCTAAGGAGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: DLACGQLRVLAPDVSLPGTPNPH*CLRRSH
Trigger: GTGGCTCCTCCTTAGACAGCAGTGAGGGTTGGGGGT...GCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGGGGATGTTGGTCTCCTaGAAAAAGGCGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKGMLVS*KKALRA
Trigger: AGCCCTCAGCGCCTTTTTCCAGGAGACCAACATCCC...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCGGCTGTAGGGGATGTTaGTCTCCTGGAAAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGGCRGC*SPGKRR
Trigger: GCGCCTTTTTCCAGGAGACCAACATCCCCTACAGCC...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGGCTGTAGGGGATGTTaGTCTCCTGGAAAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEGCRGC*SPGKRR
Trigger: GCGCCTTTTTCCAGGAGACCAACATCCCCTACAGCC...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGCGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVERRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGRRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGAAGGGGGAAAGGAAGTaGATGCGGGTACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WAAACSGTRRVPAWLESAKGERK*MRVPPG
Trigger: ACCTGGGGGTACCCGCATCCACTTCCTTTCCCCCTT...CGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACGGAGCCACGGAACCTTaGGCAGTTGGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHGATEP*AVGVGG
Trigger: TCCACCCACCCCAACTGCCCAAGGTTCCGTGGCTCC...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGCCTCCCTTGCAACAGTaGCCTCCTAAGATCACCAGA +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTPPLQQ*PPKITR
Trigger: TCTGGTGATCTTAGGAGGTCACTGTTGCAAGGGAGG...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGATCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TCGEALHSLGWGSRPAGPSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...GGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: RVGSCVFWHQTCPCLARVDQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...GACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLADQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGGGGTCGAGGCCTaGCGGCCCCCAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFPQSFSLQGTATLADEGVGVEA*RPPRSS
Trigger: GGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCAC...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACGGGAAAGGAAGTGGATaGGGGTACCCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHGKGSG*GYPQVQ
Trigger: CTGCACCTGGGGGTACCCGCATCCACTTCCTTTCCC...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCGGGTATTGGCGGGGGTaGACATCTGTGAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CVVSEVLSARHPGRAEPLGYWRG*TSVRGR
Trigger: TCTTCCCCTCACAGATGTGCACCCCCGCCAATACCC...GAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCACAGGGGCGGCTGTaGCTGGTGGTGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLPQGRL*LVVLWA
Trigger: GGCCCACAGCACCACCAGCCACAGCCGCCCCTGTGG...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGGGCCGCTGGGGCCATaGCCTTGCGTGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFPQSFSLQGTATLADEGGPLGP*PCVWAA
Trigger: AGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCC...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCGAACTAGGTTGCTTCTaGAGAGCGACACACGTAGAA +
Preference number: 4 (lower is better)
Translates to: GTRRVPAWLESALSPPGLELGCF*RATHVE
Trigger: TTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTC...GAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAGAACTAGGTTGCTTCTaGAGAGCGACACACGTAGAA +
Preference number: 4 (lower is better)
Translates to: RRVPAWLESALSPPGLRGELGCF*RATHVE
Trigger: TTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTC...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACCCTCCCTTATCTCTCTaGCTCCATGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PRSSKPGISNVSARVVLHPPLSL*LHGRVG
Trigger: GCCCACCCTGCCATGGAGGCAGAGAGATAAGGGAGG...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGTCAGGGTTGCGTGTGGGCAGCTaGGTGTTCTGGCACCAGACG +
Preference number: 4 (lower is better)
Translates to: LWKLSEALRRENMVRASGLRVGS*VFWHQT
Trigger: CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAA...CCCTGACGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR GCA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCGATCAGCAATGTCTCTaGCAGGGTGGTCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSDQQCL*QGGPPR
Trigger: CCGTGGAGGACCACCCTGGCAGAGACATTGCTGATC...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGGGGCTCACACTAACATaGAAAGTCCAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CVWAAACSGTRRVPAWLEGLTLT*KVQLPQ
Trigger: CTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCC...CTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGGAAAGGAAGTGGATaGGGGTACCCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PRSSKPGISNVSARVVLHGKGSG*GYPQVQ
Trigger: CTGCACCTGGGGGTACCCGCATCCACTTCCTTTCCC...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGAGGTCGAGCCCCGCCTaGACCAGCGCCCTCGTACAC +
Preference number: 4 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGRSSPA*TSALVH
Trigger: GTGTACGAGGGCGCTGGTGCAGGCGGGGCTCGACCT...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGCCGCAGAGCTGCTGGTaGCGGCATGGGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWPQSCW*RHGGSV
Trigger: CACACTTCCCCCATGCCGCCACCAGCAGCTCTGCGG...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTCGAAGGAAGGCTGCGTaGTCTCTGAAGTTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLARRKAA*SLKFCP
Trigger: CGGACAGAACTTCAGAGACCACGCAGCCTTCCTTCG...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCCCTCCACGGCACCCCTaGGCTGGGCTGGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRPPRHP*AGLGRC
Trigger: GCACCTGCCCAGCCCAGCCCAGGGGTGCCGTGGAGG...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGCGGTGGGAAGAGTCCTaGAGTTTCCCACAATCCTTT +
Preference number: 4 (lower is better)
Translates to: AAGAMTLRVGSCVFWHQTRWEES*SFPQSF
Trigger: AAAGGATTGTGGGAAACTCCAGGACTCTTCCCACCG...CGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGGTGGGAAGAGTCCTaGAGTTTCCCACAATCCTTT +
Preference number: 4 (lower is better)
Translates to: KFCPPGTQAALNHSMCRGRWEES*SFPQSF
Trigger: AAAGGATTGTGGGAAACTCCAGGACTCTTCCCACCG...GCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCACAGTGCCCGGGAAGTaGAGCAGAAAGACGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCTVPGK*SRKTAL
Trigger: TAGGGCCGTCTTTCTGCTCCACTTCCCGGGCACTGT...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp TTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGCAGTACACCCCATCCTaGGGGAAAGGCGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: FPQSFSLQGTATLADEGVQYTPS*GKGARP
Trigger: GGGCCGGGCGCCTTTCCCCCAGGATGGGGTGTACTG...CACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGCCCAATCCAGAACTaGGGACTCCGGGGACACTTA +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCRPIQN*GLRGHL
Trigger: TAAGTGTCCCCGGAGTCCCCAGTTCTGGATTGGGCG...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp CTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGTCAGGGGACGGGAGAACATGGTaGGAGCGTCAGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LWKLSEALRRENMVRASGDGRTW*ERQGSW
Trigger: CCAACTTCCCTGACGCTCTCACCATGTTCTCCCGTC...CCCTGACGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR TCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGAAGTGTGGCGGGGGTaGCGTGGCTGTCGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: SFPQSFSLQGTATLADEGEVWRG*RGCRGH
Trigger: ATGGCCGCGACAGCCACGTCACCCCCGCCACACTTC...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGCAGGGGTGGCCAGTCTaGAGCCGGAGAAGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGQGWPV*SRRRGC
Trigger: ACACCCCCTTCTCCGGCTTCAGACTGGCCACCCCTG...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp GGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCTGGGCTGGGCGAACTAGGTTGCTTCTaGAGAGCGACACACGTAGAA +
Preference number: 4 (lower is better)
Translates to: GISNVSARVVLHGTPGLGELGCF*RATHVE
Trigger: TTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTC...GCCCAGCCCAGGGGTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCATCGGGCTGCCGCTaGCACCGCTGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLPSGCR*HRCGSS
Trigger: AGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGG...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGCTGAACCACTCCATGTaGCGGGGCCGCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: FPQSFSLQGTATLADEGVLNHSM*RGRWGH
Trigger: ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAG...CACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCGGGATGTTGGTCTCCTaGAAAAAGGCGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCGMLVS*KKALRA
Trigger: AGCCCTCAGCGCCTTTTTCCAGGAGACCAACATCCC...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp GCCACCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGGCTGTAGGGGATGTTaGTCTCCTGGAAAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: ATAVEALGGLETGEHGESGCRGC*SPGKRR
Trigger: GCGCCTTTTTCCAGGAGACCAACATCCCCTACAGCC...GCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CCA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLRPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGCGGAGAAGGGGGTGTTaGAGTCCACAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FPQSFSLQGTATLADEGVRRRGC*SPQGRL
Trigger: CAGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCG...CACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCGGAGAAGGGGGTGTTaGAGTCCACAGGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: WGLTLTCKVQLPQELGCFRRRGC*SPQGRL
Trigger: CAGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCG...GAAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGGCCTCCATGGCAGGGTaGGCCCTGGGTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGASMAG*ALGSEV
Trigger: CACCTCAGAACCCAGGGCCCACCCTGCCATGGAGGC...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GGAACTAGGTTGCTTCTGAAGAGCGACACACGTAGAAATACACAGACACGGCCATCGCGGCCATCGGGCTaGCGCTGCCACCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: GTRLLLKSDTRRNTQTRPSRPSG*RCHRCG
Trigger: TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGA...TGGCCGTGTCTGTGTATTTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCACCAGACGTGTCCCTaGCTGGCTAGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLHQTCP*LARVRA
Trigger: AGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTG...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CTGCCACCGCTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGGGATGTTGGTCTCCTaGAAAAAGGCGCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LPPLWKLSEALRRENMVRGMLVS*KKALRA
Trigger: AGCCCTCAGCGCCTTTTTCCAGGAGACCAACATCCC...TCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAGCGGTGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCTGTAGGGGATGTTaGTCTCCTGGAAAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: PRSSKPGISNVSARVVLHGCRGC*SPGKRR
Trigger: GCGCCTTTTTCCAGGAGACCAACATCCCCTACAGCC...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp TCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGAAGGAACAGCAACGCTaGCTGACGAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SHNPFLCKEQQRWLTRGWKEQQR*LTRGWG
Trigger: TCCCCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTT...CCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CACAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGCGGTGGGAAGAGTCCTaGAGTTTCCCACAATCCTTT +
Preference number: 4 (lower is better)
Translates to: HRHGHAHTCGEALHSLGWRWEES*SFPQSF
Trigger: AAAGGATTGTGGGAAACTCCAGGACTCTTCCCACCG...CCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp TCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCAGGAGATTCTAGCCTaGCTGTTACCACCTCAACGG +
Preference number: 4 (lower is better)
Translates to: SLKFCPPGTQAALNHSMCQEILA*LLPPQR
Trigger: CCGTTGAGGTGGTAACAGCCAGGCTAGAATCTCCTG...GCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR TCA 90 bp TGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCCTGGAAAAAGGCGCTaGGGGCTGTCTCGAACTGCC +
Preference number: 4 (lower is better)
Translates to: WGLTLTCKVQLPQELGCFPGKRR*GLSRTA
Trigger: GGCAGTTCGAGACAGCCCTCAGCGCCTTTTTCCAGG...GAAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000283474.12
CDS-3UTR TCA 90 bp CACAGACACGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGAACTAGGTTGCTTCTaGAGAGCGACACACGTAGAA +
Preference number: 4 (lower is better)
Translates to: HRHGHAHTCGEALHSLGWELGCF*RATHVE
Trigger: TTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTC...CCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCGTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGAAGCAAAAGCATCCTaGAGGAGTCTGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRSSKPGISNVSARVVLHEAKAS*RSLSLV
Trigger: CACCAGGCTCAGACTCCTTCAGGATGCTTTTGCTTC...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGGCCACGCGCACACATaGGGAGAGGCTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: SFPQSFSLQGTATLADEGGHAHT*GEALHS
Trigger: GGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCC...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTGGGGAAAGGAAGTGGATaGGGGTACCCCCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPQSFSLQGTATLADEGVGKGSG*GYPQVQ
Trigger: CTGCACCTGGGGGTACCCGCATCCACTTCCTTTCCC...CACCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGAAGGAACAGCAACGCTaGCTGACGAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGKEQQR*LTRGWG
Trigger: TCCCCACCCCCTCGTCAGCCAGCGTTGCTGTTCCTT...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGGGGAGATGCGTGGCTaGCCCATTCTCGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFPQSFSLQGTATLADEGGEMRG*PILGRL
Trigger: GAGCCTTCCGAGAATGGGCCAGCCACGCATCTCCCC...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp AGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGCCTCCCTTATCTCTCTaGCTCCATGGCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SFPQSFSLQGTATLADEGPPLSL*LHGRVG
Trigger: GCCCACCCTGCCATGGAGGCAGAGAGATAAGGGAGG...CCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGAACTAGGTTGCTTCTGAAGAGCGACACACGTAGAAATACACAGACACGGCCAAGGCCGCAGAGCTGCTaGTGGCGGCATGGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTRLLLKSDTRRNTQTRPRPQSC*WRHGGS
Trigger: ACTTCCCCCATGCCGCCACCAGCAGCTCTGCGGCCT...TGGCCGTGTCTGTGTATTTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp CCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACCGGTGGGAAGAGTCCTaGAGTTTCCCACAATCCTTT +
Preference number: 4 (lower is better)
Translates to: PRSSKPGISNVSARVVLHRWEES*SFPQSF
Trigger: AAAGGATTGTGGGAAACTCCAGGACTCTTCCCACCG...GTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCGGCGCTGGGAGGCGGTaGGAAGAGTCCTGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRGAGRR*EESWSF
Trigger: GAAACTCCAGGACTCTTCCCACCGCCTCCCAGCGCC...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR TCA 90 bp CTGTGGAAGCTCTCGGAGGCCTTGAGACGGGAGAACATGGTGAGAGCGTCAGGGGAACTAGGTTGCTTCTaGAGAGCGACACACGTAGAA +
Preference number: 4 (lower is better)
Translates to: LWKLSEALRRENMVRASGELGCF*RATHVE
Trigger: TTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTC...CCCTGACGCTCTCACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590965.1
CDS-3UTR CCA 90 bp TGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCGGCTGTAGGGGATGTTaGTCTCCTGGAAAAAGGCGC +
Preference number: 4 (lower is better)
Translates to: WGLTLTCKVQLPQELGCFGCRGC*SPGKRR
Trigger: GCGCCTTTTTCCAGGAGACCAACATCCCCTACAGCC...GAAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CCA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCAAGGGGGAAAGGAAGTaGATGCGGGTACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRKGERK*MRVPPG
Trigger: ACCTGGGGGTACCCGCATCCACTTCCTTTCCCCCTT...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CCA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGAAGGGGGCCACTGTTTaGGCCTTGGTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGKGATV*ALVSPS
Trigger: AGATGGAGAAACCAAGGCCCAAACAGTGGCCCCCTT...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR GCA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp TGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCTCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: WGLTLTCKVQLPQELGCFSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...GAAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR GCA 90 bp GGAACTAGGTTGCTTCTGAAGAGCGACACACGTAGAAATACACAGACACGGCCATCTTCGAAGGAAGGCTaGGTGGTCTCTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GTRLLLKSDTRRNTQTRPSSKEG*VVSEVL
Trigger: CAGAACTTCAGAGACCACGCAGCCTTCCTTCGAAGA...TGGCCGTGTCTGTGTATTTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS GCA 90 bp CCTCGGACCACTCGCCCGGAGCGGCTCCGCCCTCCGGCCCAGCTCTaGCGAGGCCTGGGGCGTCCTCCTTCCGGCCGCCCGCCCGACTGT +
Preference number: 5 (lower is better)
Translates to: PRTTRPERLRPPAQL*RGLGRPPSGRPPDC
Trigger: ACAGTCGGGCGGGCGGCCGGAAGGAGGACGCCCCAGGCCTCGGCAGAGCTGGGCCGGAGGGCGGAGCCGCTCCGGGCGAGTGGTCCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CCA 90 bp CTCGCCCGGAGCGGCTCCGCCCTCCGGCCCAGCTCTGCCGAGGCCTaGGGCGTCCTCCTTCCGGCCGCCCGCCCGACTGTCCGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LARSGSALRPSSAEA*GVLLPAARPTVRLH
Trigger: GTGCAGACGGACAGTCGGGCGGGCGGCCGGAAGGAGGACGCCCCAGGCCTCGGCAGAGCTGGGCCGGAGGGCGGAGCCGCTCCGGGCGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 90 bp ACACCAAACGCACCAGGGGGCTGCGCGTTCACACGCGCGCCAACGTaGCCGCAGGTCCGCCACCTCCCCGGTGCCCGGCCGACGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TPNAPGGCAFTRAPT*PQVRHLPGARPTPW
Trigger: CCACGGCGTCGGCCGGGCACCGGGGAGGTGGCGGACCTGCGGGCACGTTGGCGCGCGTGTGAACGCGCAGCCCCCTGGTGCGTTTGGTGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS TCA 90 bp GGGATGCTCCACCGTCTCCCTCCACACCCGGGCCGCATGCCACACTaGGCACGGTGCGGGCACCCAGCAGGGCTCCATCCCAGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GMLHRLPPHPGRMPH*ARCGHPAGLHPSGA
Trigger: GGCCCCGCTGGGATGGAGCCCTGCTGGGTGCCCGCACCGTGCTCAGTGTGGCATGCGGCCCGGGTGTGGAGGGAGACGGTGGAGCATCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 90 bp CGGTGCCCGGCCGACGCCGTGGCGCGGTGCGTGCGTAAACACAAATaGACATGGACGTGTGCGCACGCCGCCGACCGCCCACCAGGCACG +
Preference number: 5 (lower is better)
Translates to: RCPADAVARCVRKHK*TWTCAHAADRPPGT
Trigger: CGTGCCTGGTGGGCGGTCGGCGGCGTGCGCACACGTCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 90 bp GTCCGCCACCTCCCCGGTGCCCGGCCGACGCCGTGGCGCGGTGCGTaGGTAAACACAAATGCACATGGACGTGTGCGCACGCCGCCGACC +
Preference number: 5 (lower is better)
Translates to: VRHLPGARPTPWRGA*VNTNAHGRVRTPPT
Trigger: GGTCGGCGGCGTGCGCACACGTCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAGGTGGCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 90 bp GCAGGTCCGCCACCTCCCCGGTGCCCGGCCGACGCCGTGGCGCGGTaGGTGCGTAAACACAAATGCACATGGACGTGTGCGCACGCCGCC +
Preference number: 5 (lower is better)
Translates to: AGPPPPRCPADAVAR*VRKHKCTWTCAHAA
Trigger: GGCGGCGTGCGCACACGTCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAGGTGGCGGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 90 bp GTTCACACGCGCGCCAACGTGCCCGCAGGTCCGCCACCTCCCCGGTaGCCGGCCGACGCCGTGGCGCGGTGCGTGCGTAAACACAAATGC +
Preference number: 5 (lower is better)
Translates to: VHTRANVPAGPPPPR*PADAVARCVRKHKC
Trigger: GCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAGGTGGCGGACCTGCGGGCACGTTGGCGCGCGTGTGAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS-3UTR CAA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATCCGGAGAAGGGGGTGTaGGAGTCCACAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHPEKGV*ESTGAA
Trigger: AGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCGG...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS GCA 90 bp CTCCCCAGCCACCCGCCCTTGGCTGGCACCACGCTAGGCACGGGATaGTCCACCGTCTCCCTCCACACCCGGGCCGCATGCCACACTGAG +
Preference number: 5 (lower is better)
Translates to: LPSHPPLAGTTLGTG*STVSLHTRAACHTE
Trigger: CTCAGTGTGGCATGCGGCCCGGGTGTGGAGGGAGACGGTGGAGCATCCCGTGCCTAGCGTGGTGCCAGCCAAGGGCGGGTGGCTGGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp GCGGGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTGCCACCGCTGTGGAGGTGTAGCAGGGGTATaGGCGGGGGTGCACATCATC +
Preference number: 5 (lower is better)
Translates to: AGVTWLSRPSGCRCHRCGGVAGV*AGVHII
Trigger: GATGATGTGCACCCCCGCCAATACCCCTGCTACACC...TCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587649.1
ENST00000590965.1
CDS-3UTR CAA 90 bp TGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCCGGAGAAGGGGGTGTaGGAGTCCACAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: CAGAAGAMTLRVGSCVFWPEKGV*ESTGAA
Trigger: AGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCGG...CCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCCGGAGAAGGGGGTGTaGGAGTCCACAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GTRRVPAWLESALSPPGLPEKGV*ESTGAA
Trigger: AGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCGG...GAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: ALNHSMCRGRWGHDLACGAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...CCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp CCAGGCACCCAGGCCGCGCTGAACCACTCCATGTGCCGGGGCCGCTGGGGCCATGGTGTAGCAGGGGTATaGGCGGGGGTGCACATCATC +
Preference number: 5 (lower is better)
Translates to: PGTQAALNHSMCRGRWGHGVAGV*AGVHII
Trigger: GATGATGTGCACCCCCGCCAATACCCCTGCTACACC...ATGGCCCCAGCGGCCCCGGCACATGGAGTGGTTCAGCGCGGCCTGGGTGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000283474.12
ENST00000590965.1
ENST00000591897.5
CDS TCA 90 bp GCCGGGCACGGGCGGCATCTGCACACCCGCCACATGTGTACGCGTTaGTCACACACCAAACGCACCAGGGGGCTGCGCGTTCACACGCGC +
Preference number: 5 (lower is better)
Translates to: AGHGRHLHTRHMCTR*SHTKRTRGLRVHTR
Trigger: GCGCGTGTGAACGCGCAGCCCCCTGGTGCGTTTGGTGTGTGATCAACGCGTACACATGTGGCGGGTGTGCAGATGCCGCCCGTGCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS-3UTR CAA 90 bp TGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: WAAACSGTRRVPAWLESAAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...CGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GGCACCAGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCGGTGTAGCAGGGGTATaGGCGGGGGTGCACATCTCG +
Preference number: 5 (lower is better)
Translates to: GTRRVPAWLESALSPPGLGVAGV*AGVHIS
Trigger: CGAGATGTGCACCCCCGCCAATACCCCTGCTACACC...GAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCTGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591401.5
CDS-3UTR CAA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACCCCAGCCACCCGCCCTaGGCTGGCACCACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHPSHPP*AGTTLG
Trigger: GCCTAGCGTGGTGCCAGCCAAGGGCGGGTGGCTGGG...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 90 bp GGAACCTTGGGCAGTTGGGGTGGGTGGAGAAGACCCTTCCCCTGCTaGTCGCCACCTGCCTCAGTGCCTAAGGCCTGCAGAGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GTLGSWGGWRRPFPC*SPPASVPKACRALP
Trigger: GGGGAGGGCTCTGCAGGCCTTAGGCACTGAGGCAGGTGGCGAGCAGCAGGGGAAGGGTCTTCTCCACCCACCCCAACTGCCCAAGGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 90 bp GCCACATGTGTACGCGTTGATCACACACCAAACGCACCAGGGGGCTaGGCGTTCACACGCGCGCCAACGTGCCCGCAGGTCCGCCACCTC +
Preference number: 5 (lower is better)
Translates to: ATCVRVDHTPNAPGG*AFTRAPTCPQVRHL
Trigger: GAGGTGGCGGACCTGCGGGCACGTTGGCGCGCGTGTGAACGCGCAGCCCCCTGGTGCGTTTGGTGTGTGATCAACGCGTACACATGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 90 bp GACACGCCACCCCTACACTCCAGGCCGTGTACACACATCACACCGTaGCGGGCACGGGCGGCATCTGCACACCCGCCACATGTGTACGCG +
Preference number: 5 (lower is better)
Translates to: DTPPLHSRPCTHITP*RARAASAHPPHVYA
Trigger: CGCGTACACATGTGGCGGGTGTGCAGATGCCGCCCGTGCCCGGCACGGTGTGATGTGTGTACACGGCCTGGAGTGTAGGGGTGGCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CCA 90 bp TTTACGACAGCTCCCAGCACAGCTCCCCAGCCACCCGCCCTTGGCTaGCACCACGCTAGGCACGGGATGCTCCACCGTCTCCCTCCACAC +
Preference number: 5 (lower is better)
Translates to: FTTAPSTAPQPPALG*HHARHGMLHRLPPH
Trigger: GTGTGGAGGGAGACGGTGGAGCATCCCGTGCCTAGCGTGGTGCCAGCCAAGGGCGGGTGGCTGGGGAGCTGTGCTGGGAGCTGTCGTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCAGGTGTAGCAGGGGTATaGGCGGGGGTGCACATCATC +
Preference number: 5 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAGVAGV*AGVHII
Trigger: GATGATGTGCACCCCCGCCAATACCCCTGCTACACC...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000283474.12
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CAA 90 bp TGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGCCGGAGAAGGGGGTGTaGGAGTCCACAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: CVWAAACSGTRRVPAWLEPEKGV*ESTGAA
Trigger: AGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCGG...CTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp TGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCCCGGAGAAGGGGGTGTaGGAGTCCACAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: CVVSEVLSARHPGRAEPLPEKGV*ESTGAA
Trigger: AGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCGG...GAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp CGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTAGAGTCGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: RVGSCVFWHQTCPCLARVAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...GACTCTAGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp ACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCACCAGACGTGTCCCTGCCTGGCTGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: TLRVGSCVFWHQTCPCLAAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...AGCCAGGCAGGGACACGTCTGGTGCCAGAACACGCAGCTGCCCACACGCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283474.12
ENST00000587615.1
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGCTGAGGCTCAGTGGCTaGCCTGTCACCCCCAACCCT +
Preference number: 5 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVELRLSG*PVTPNP
Trigger: AGGGTTGGGGGTGACAGGCAAGCCACTGAGCCTCAG...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp TGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTCTGGCAAAGCTCTCGGAGGCCTaGAGACGGGAGAACATGGTG +
Preference number: 5 (lower is better)
Translates to: CRGRWGHDLACGQLRVLAKLSEA*RRENMV
Trigger: CACCATGTTCTCCCGTCTCAAGGCCTCCGAGAGCTT...TGCCAGAACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS TCA 90 bp ATGACCCTGGCTGGACTGCTGAGTGGGAGGGGTGAGTCGCGGTGCTaGGGCTCAGTGGCTTGCCTGTCACCCCCAACCCTCACTGCTGTC +
Preference number: 5 (lower is better)
Translates to: MTLAGLLSGRGESRC*GSVACLSPPTLTAV
Trigger: GACAGCAGTGAGGGTTGGGGGTGACAGGCAAGCCACTGAGCCTCAGCACCGCGACTCACCCCTCCCACTCAGCAGTCCAGCCAGGGTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 90 bp GCGGTGCTGAGGCTCAGTGGCTTGCCTGTCACCCCCAACCCTCACTaGTGTCTAAGGAGGAGCCACGGAACCTTGGGCAGTTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: AVLRLSGLPVTPNPH*CLRRSHGTLGSWGG
Trigger: CCCACCCCAACTGCCCAAGGTTCCGTGGCTCCTCCTTAGACAGCAGTGAGGGTTGGGGGTGACAGGCAAGCCACTGAGCCTCAGCACCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp ACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAACGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 5 (lower is better)
Translates to: TCPCLARVRALPSRAPGNAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...GTTCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp AGACGTGTCCCTGCCTGGCTAGAGTCCGCGCTCTCCCCTCCAGGGCTCCGGGGAGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 5 (lower is better)
Translates to: RRVPAWLESALSPPGLRGAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...TCCCCGGAGCCCTGGAGGGGAGAGCGCGGACTCTAGCCAGGCAGGGACACGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp TCTGCATTCCCTAGGGTGGGGGTCGAGGCCTGCCGGCCCCCAAGGAGCTCCAAGCAAGGGGGCCACTGTTaGGGCCTTGGTTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: SAFPRVGVEACRPPRSSKQGGHC*GLGFSI
Trigger: GATGGAGAAACCAAGGCCCAAACAGTGGCCCCCTTG...CTTGGAGCTCCTTGGGGGCCGGCAGGCCTCGACCCCCACCCTAGGGAATGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp TGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACTCGGTGTAGCAGGGGTATaGGCGGGGGTGCACATCATC +
Preference number: 5 (lower is better)
Translates to: CVVSEVLSARHPGRAEPLGVAGV*AGVHII
Trigger: GATGATGTGCACCCCCGCCAATACCCCTGCTACACC...GAGTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283474.12
ENST00000590965.1
ENST00000591897.5
CDS-3UTR CAA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 5 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS GCA 90 bp CAGGCCGTGTACACACATCACACCGTGCCGGGCACGGGCGGCATCTaGACACCCGCCACATGTGTACGCGTTGATCACACACCAAACGCA +
Preference number: 5 (lower is better)
Translates to: QAVYTHHTVPGTGGI*TPATCVRVDHTPNA
Trigger: TGCGTTTGGTGTGTGATCAACGCGTACACATGTGGCGGGTGTGCAGATGCCGCCCGTGCCCGGCACGGTGTGATGTGTGTACACGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CCA 90 bp GGGCTGTCTCTGAAGGGGATACACGCTCATCCCTGTGGTGTAGTGTaGGGCTCCGACACGCCACCCCTACACTCCAGGCCGTGTACACAC +
Preference number: 5 (lower is better)
Translates to: GLSLKGIHAHPCGVV*GSDTPPLHSRPCTH
Trigger: GTGTGTACACGGCCTGGAGTGTAGGGGTGGCGTGTCGGAGCCCCACACTACACCACAGGGATGAGCGTGTATCCCCTTCAGAGACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS-3UTR CAA 90 bp GCTGCGTGGTCTCTGAAGTTCTGTCCGCCAGGCACCCAGGCCGCGCTGAACCACGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 5 (lower is better)
Translates to: AAWSLKFCPPGTQAALNHAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...GTGGTTCAGCGCGGCCTGGGTGCCTGGCGGACAGAACTTCAGAGACCACGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCACGGCACGGTGTAGCAGGGGTATaGGCGGGGGTGCACATCTGT +
Preference number: 5 (lower is better)
Translates to: ELQARDQQCLCQGGPPRHGVAGV*AGVHIC
Trigger: ACAGATGTGCACCCCCGCCAATACCCCTGCTACACC...GTGCCGTGGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTCCGGAGAAGGGGGTGTaGGAGTCCACAGGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLPEKGV*ESTGAA
Trigger: AGCCGCCCCTGTGGACTCCAACACCCCCTTCTCCGG...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGGCTGGGGCCATGACCTaGCGTGTGGGCAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGAGAMT*RVGSCV
Trigger: CACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGC...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS CCA 90 bp TGCCCCACCCAGCTCTGCTTCTGGCTGATCAAGGGGGCCACTGTTTaGGCCTTGGTTTCTCCATCTGTACCACAAAGAGGTTCGACTAGG +
Preference number: 5 (lower is better)
Translates to: CPTQLCFWLIKGATV*ALVSPSVPQRGSTR
Trigger: CCTAGTCGAACCTCTTTGTGGTACAGATGGAGAAACCAAGGCCCAAACAGTGGCCCCCTTGATCAGCCAGAAGCAGAGCTGGGTGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CCA 90 bp CCAACCAGACCTCCCCACCCTGCCCCGTTTCAGGAGATTCTAGCCTaGCTGTTACCACCTCAACGGGTAGCAAGTCTCTACTCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: PTRPPHPAPFQEILA*LLPPQRVASLYSSL
Trigger: TAGAGAAGAGTAGAGACTTGCTACCCGTTGAGGTGGTAACAGCCAGGCTAGAATCTCCTGAAACGGGGCAGGGTGGGGAGGTCTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp CTGGGGGCTCACACTAACATGCAAAGTCCAGCTGCCCCAGGAACTAGGTTGCTTGCCCCAGGAACTAGGTaGCTTCTGAAGAGCGACACA +
Preference number: 5 (lower is better)
Translates to: LGAHTNMQSPAAPGTRLLAPGTR*LLKSDT
Trigger: TGTGTCGCTCTTCAGAAGCAACCTAGTTCCTGGGGC...AAGCAACCTAGTTCCTGGGGCAGCTGGACTTTGCATGTTAGTGTGAGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp TCCATGTGCCGGGGCCGCTGGGGCCATGACCTTGCGTGTGGGCAGCTGCGTGTTATTCGTTCTTCTCTTTaGTTAAAAGGGGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: SMCRGRWGHDLACGQLRVIRSSL*LKGGKE
Trigger: TTCCTTTCCCCCTTTTAACAAAAGAGAAGAACGAAT...AACACGCAGCTGCCCACACGCAAGGTCATGGCCCCAGCGGCCCCGGCACATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp CGGCCACGCGCACACATGCGGAGAGGCTCTGCATTCCCTAGGGTGGGGGTCGAGATTCGTTCTTCTCTTTaGTTAAAAGGGGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: RPRAHMRRGSAFPRVGVEIRSSL*LKGGKE
Trigger: TTCCTTTCCCCCTTTTAACAAAAGAGAAGAACGAAT...CTCGACCCCCACCCTAGGGAATGCAGAGCCTCTCCGCATGTGTGCGCGTGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS CCA 90 bp TGGGCCTTGGTTTCTCCATCTGTACCACAAAGAGGTTCGACTAGGTaGCTCCTGGGTCCCCTCCCTTGCAACAGTGACCTCCTAAGATCA +
Preference number: 5 (lower is better)
Translates to: WALVSPSVPQRGSTR*LLGPLPCNSDLLRS
Trigger: TGATCTTAGGAGGTCACTGTTGCAAGGGAGGGGACCCAGGAGCCACCTAGTCGAACCTCTTTGTGGTACAGATGGAGAAACCAAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp CCCCAAGGAGCTCCAAGCCAGGGATCAGCAATGTCTCTGCCAGGGTGGTCCTCCATTCGTTCTTCTCTTTaGTTAAAAGGGGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PQGAPSQGSAMSLPGWSSIRSSL*LKGGKE
Trigger: TTCCTTTCCCCCTTTTAACAAAAGAGAAGAACGAAT...GGAGGACCACCCTGGCAGAGACATTGCTGATCCCTGGCTTGGAGCTCCTTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GGAACTAGGTTGCTTCTGAAGAGCGACACACGTAGAAATACACAGACACGGCCAGCCACTGTTTGGGCCTaGGTTTCTCCATCTGTACCA +
Preference number: 5 (lower is better)
Translates to: GTRLLLKSDTRRNTQTRPATVWA*VSPSVP
Trigger: TGGTACAGATGGAGAAACCAAGGCCCAAACAGTGGC...TGGCCGTGTCTGTGTATTTCTACGTGTGTCGCTCTTCAGAAGCAACCTAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS-3UTR CAA 90 bp GTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCTGGCTGACGAGGGGGATTCGTTCTTCTCTTTaGTTAAAAGGGGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: VSHNPFLCKEQQRWLTRGIRSSL*LKGGKE
Trigger: TTCCTTTCCCCCTTTTAACAAAAGAGAAGAACGAAT...CCCCCTCGTCAGCCAGCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS-3UTR CAA 90 bp GGGAAGAGTCCTGGAGTTTCCCACAATCCTTTTCTCTGCAAGGAACAGCAACGCATTCGTTCTTCTCTTTaGTTAAAAGGGGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GKSPGVSHNPFLCKEQQRIRSSL*LKGGKE
Trigger: TTCCTTTCCCCCTTTTAACAAAAGAGAAGAACGAAT...GCGTTGCTGTTCCTTGCAGAGAAAAGGATTGTGGGAAACTCCAGGACTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283474.12
ENST00000590891.1
ENST00000590965.1
ENST00000591401.5
ENST00000591897.5
CDS GCA 72 bp GCACCAGGGGGCTGCGCGTTCACACGCGCGCCAACGTaGCCGCAGGTCCGCCACCTCCCCGGTGCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: APGGCAFTRAPT*PQVRHLPGARP
Trigger: CGGCCGGGCACCGGGGAGGTGGCGGACCTGCGGGCACGTTGGCGCGCGTGTGAACGCGCAGCCCCCTGGTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 72 bp CGCGCCAACGTGCCCGCAGGTCCGCCACCTCCCCGGTaGCCGGCCGACGCCGTGGCGCGGTGCGTGCGTAAA +
Preference number: 6 (lower is better)
Translates to: RANVPAGPPPPR*PADAVARCVRK
Trigger: TTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAGGTGGCGGACCTGCGGGCACGTTGGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CAA 72 bp AAGGCGCTGAGGGCTGTCTCCGCCCGCCGCGAGCCCTaGGGATCCGGACGCCGGGCACCGCCGTCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: KALRAVSARREP*GSGRRAPPSGK
Trigger: CTTTCCCGACGGCGGTGCCCGGCGTCCGGATCCCAAGGGCTCGCGGCGGGCGGAGACAGCCCTCAGCGCCTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587649.1
CDS TCA 72 bp CACCGTCTCCCTCCACACCCGGGCCGCATGCCACACTaGGCACGGTGCGGGCACCCAGCAGGGCTCCATCCC +
Preference number: 6 (lower is better)
Translates to: HRLPPHPGRMPH*ARCGHPAGLHP
Trigger: GGGATGGAGCCCTGCTGGGTGCCCGCACCGTGCTCAGTGTGGCATGCGGCCCGGGTGTGGAGGGAGACGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 72 bp CACCCGCCCTTGGCTGGCACCACGCTAGGCACGGGATaGTCCACCGTCTCCCTCCACACCCGGGCCGCATGC +
Preference number: 6 (lower is better)
Translates to: HPPLAGTTLGTG*STVSLHTRAAC
Trigger: GCATGCGGCCCGGGTGTGGAGGGAGACGGTGGAGCATCCCGTGCCTAGCGTGGTGCCAGCCAAGGGCGGGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 72 bp GGGGTGACGTGGCTGTCGCGGCCATCGGGCTGCCGCTaGCACCGCTGTGGAAGCTCTCGGAGGCCATCTGGT +
Preference number: 6 (lower is better)
Translates to: GVTWLSRPSGCR*HRCGSSRRPSG
Trigger: ACCAGATGGCCTCCGAGAGCTTCCACAGCGGTGGCAGCGGCAGCCCGATGGCCGCGACAGCCACGTCACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587615.1
CDS GCA 72 bp GCCGACGCCGTGGCGCGGTGCGTGCGTAAACACAAATaGACATGGACGTGTGCGCACGCCGCCGACCGCCCA +
Preference number: 6 (lower is better)
Translates to: ADAVARCVRKHK*TWTCAHAADRP
Trigger: TGGGCGGTCGGCGGCGTGCGCACACGTCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 72 bp CTCCCCGGTGCCCGGCCGACGCCGTGGCGCGGTGCGTaGGTAAACACAAATGCACATGGACGTGTGCGCACG +
Preference number: 6 (lower is better)
Translates to: LPGARPTPWRGA*VNTNAHGRVRT
Trigger: CGTGCGCACACGTCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 72 bp CCACCTCCCCGGTGCCCGGCCGACGCCGTGGCGCGGTaGGTGCGTAAACACAAATGCACATGGACGTGTGCG +
Preference number: 6 (lower is better)
Translates to: PPPRCPADAVAR*VRKHKCTWTCA
Trigger: CGCACACGTCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CCA 72 bp CAGGTCCGCCACCTCCCCGGTGCCCGGCCGACGCCGTaGCGCGGTGCGTGCGTAAACACAAATGCACATGGA +
Preference number: 6 (lower is better)
Translates to: QVRHLPGARPTP*RGACVNTNAHG
Trigger: TCCATGTGCATTTGTGTTTACGCACGCACCGCGCCACGGCGTCGGCCGGGCACCGGGGAGGTGGCGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CAA 90 bp TGCCGGGCACGGGCGGCATCTGCACACCCGCCACATGTGTACGCGTaGATCACACACCAAACGCACCAGGGGGCTGCGCGTTCACACGCG +
Preference number: 6 (lower is better)
Translates to: CRARAASAHPPHVYA*ITHQTHQGAARSHA
Trigger: CGCGTGTGAACGCGCAGCCCCCTGGTGCGTTTGGTGTGTGATCAACGCGTACACATGTGGCGGGTGTGCAGATGCCGCCCGTGCCCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS TCA 72 bp GGGGATGACCCTGGCTGGACTGCTGAGTGGGAGGGGTaGGTCGCGGTGCTGAGGCTCAGTGGCTTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GDDPGWTAEWEG*VAVLRLSGLPV
Trigger: GACAGGCAAGCCACTGAGCCTCAGCACCGCGACTCACCCCTCCCACTCAGCAGTCCAGCCAGGGTCATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 72 bp CCTGCACCAGCGCCCTCGTACACCGGGGCCAGGGGCTaGTTATACACAGAACTAGCTCGGCCTCCTTCCGCC +
Preference number: 6 (lower is better)
Translates to: PAPAPSYTGARG*LYTELARPPSA
Trigger: GGCGGAAGGAGGCCGAGCTAGTTCTGTGTATAAGCAGCCCCTGGCCCCGGTGTACGAGGGCGCTGGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 72 bp GTACGCGTTGATCACACACCAAACGCACCAGGGGGCTaGGCGTTCACACGCGCGCCAACGTGCCCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: VRVDHTPNAPGG*AFTRAPTCPQV
Trigger: GACCTGCGGGCACGTTGGCGCGCGTGTGAACGCGCAGCCCCCTGGTGCGTTTGGTGTGTGATCAACGCGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 72 bp CCCCTACACTCCAGGCCGTGTACACACATCACACCGTaGCGGGCACGGGCGGCATCTGCACACCCGCCACAT +
Preference number: 6 (lower is better)
Translates to: PLHSRPCTHITP*RARAASAHPPH
Trigger: ATGTGGCGGGTGTGCAGATGCCGCCCGTGCCCGGCACGGTGTGATGTGTGTACACGGCCTGGAGTGTAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS CCA 72 bp AGGAGGAGCCACGGAACCTTGGGCAGTTGGGGTGGGTaGAGAAGACCCTTCCCCTGCTGCTCGCCACCTGCC +
Preference number: 6 (lower is better)
Translates to: RRSHGTLGSWGG*RRPFPCCSPPA
Trigger: GGCAGGTGGCGAGCAGCAGGGGAAGGGTCTTCTCCACCCACCCCAACTGCCCAAGGTTCCGTGGCTCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS TCA 72 bp CGCCGCCCAGGGGTTCCCAGAGGAGAAGCCTTGAGATaGACCGACCCAGCCTCACTCTCAGGAGCCCACGGT +
Preference number: 6 (lower is better)
Translates to: RRPGVPRGEALR*TDPASLSGAHG
Trigger: ACCGTGGGCTCCTGAGAGTGAGGCTGGGTCGGTTCATCTCAAGGCTTCTCCTCTGGGAACCCCTGGGCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CAA 72 bp CGGGCGGCATCTGCACACCCGCCACATGTGTACGCGTaGATCACACACCAAACGCACCAGGGGGCTGCGCGT +
Preference number: 6 (lower is better)
Translates to: RAASAHPPHVYA*ITHQTHQGAAR
Trigger: ACGCGCAGCCCCCTGGTGCGTTTGGTGTGTGATCAACGCGTACACATGTGGCGGGTGTGCAGATGCCGCCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS TCA 72 bp GGGCGGCATCTGCACACCCGCCACATGTGTACGCGTTaGTCACACACCAAACGCACCAGGGGGCTGCGCGTT +
Preference number: 6 (lower is better)
Translates to: GRHLHTRHMCTR*SHTKRTRGLRV
Trigger: AACGCGCAGCCCCCTGGTGCGTTTGGTGTGTGATCAACGCGTACACATGTGGCGGGTGTGCAGATGCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591113.1
CDS GCA 72 bp CAGGTCTCAGGGGGAGCTGGCACAGGCAAGATTAAGTaGAGGACCCACGGAGCCGGGACTCCTGCTGACCCA +
Preference number: 6 (lower is better)
Translates to: QVSGGAGTGKIK*RTHGAGTPADP
Trigger: TGGGTCAGCAGGAGTCCCGGCTCCGTGGGTCCTGCACTTAATCTTGCCTGTGCCAGCTCCCCCTGAGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 72 bp AGGCTCAGTGGCTTGCCTGTCACCCCCAACCCTCACTaGTGTCTAAGGAGGAGCCACGGAACCTTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: RLSGLPVTPNPH*CLRRSHGTLGS
Trigger: ACTGCCCAAGGTTCCGTGGCTCCTCCTTAGACAGCAGTGAGGGTTGGGGGTGACAGGCAAGCCACTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CAA 72 bp AACCCTCACTGCTGTCTAAGGAGGAGCCACGGAACCTaGGGCAGTTGGGGTGGGTGGAGAAGACCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: NPHCCLRRSHGT*GSWGGWRRPFP
Trigger: GGGGAAGGGTCTTCTCCACCCACCCCAACTGCCCAAGGTTCCGTGGCTCCTCCTTAGACAGCAGTGAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CCA 72 bp CCTCCCCACCCTGCCCCGTTTCAGGAGATTCTAGCCTaGCTGTTACCACCTCAACGGGTAGCAAGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: PPHPAPFQEILA*LLPPQRVASLY
Trigger: GTAGAGACTTGCTACCCGTTGAGGTGGTAACAGCCAGGCTAGAATCTCCTGAAACGGGGCAGGGTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CCA 72 bp AGAACTAGCTCGGCCTCCTTCCGCCCAATCCAGAACTaGGGACTCCGGGGACACTTACCATCTGGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: RTSSASFRPIQN*GLRGHLPSGGD
Trigger: ATCACCACCAGATGGTAAGTGTCCCCGGAGTCCCCAGTTCTGGATTGGGCGGAAGGAGGCCGAGCTAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS GCA 72 bp AGAGGTTCGACTAGGTGGCTCCTGGGTCCCCTCCCTTaGAACAGTGACCTCCTAAGATCACCAGATTCCAGC +
Preference number: 6 (lower is better)
Translates to: RGSTRWLLGPLP*NSDLLRSPDSS
Trigger: GCTGGAATCTGGTGATCTTAGGAGGTCACTGTTGCAAGGGAGGGGACCCAGGAGCCACCTAGTCGAACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CAA 90 bp ACCCAGCTCTGCTTCTGGCTGATCAAGGGGGCCACTGTTTGGGCCTaGGTTTCTCCATCTGTACCACAAAGAGGTTCGACTAGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: TQLCFWLIKGATVWA*VSPSVPQRGSTRWL
Trigger: GAGCCACCTAGTCGAACCTCTTTGTGGTACAGATGGAGAAACCAAGGCCCAAACAGTGGCCCCCTTGATCAGCCAGAAGCAGAGCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CCA 72 bp GTTTCTCCATCTGTACCACAAAGAGGTTCGACTAGGTaGCTCCTGGGTCCCCTCCCTTGCAACAGTGACCTC +
Preference number: 6 (lower is better)
Translates to: VSPSVPQRGSTR*LLGPLPCNSDL
Trigger: GAGGTCACTGTTGCAAGGGAGGGGACCCAGGAGCCACCTAGTCGAACCTCTTTGTGGTACAGATGGAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590891.1
CDS CAA 72 bp TGCTTCTGGCTGATCAAGGGGGCCACTGTTTGGGCCTaGGTTTCTCCATCTGTACCACAAAGAGGTTCGACT +
Preference number: 6 (lower is better)
Translates to: CFWLIKGATVWA*VSPSVPQRGST
Trigger: AGTCGAACCTCTTTGTGGTACAGATGGAGAAACCAAGGCCCAAACAGTGGCCCCCTTGATCAGCCAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590891.1