RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBAC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134882

Ensembl transcript IDs: ENST00000355700.9, ENST00000376440.6, ENST00000403766.8, ENST00000457666.1, ENST00000460562.5, ENST00000468067.5, ENST00000473091.5, ENST00000473194.5, ENST00000474510.2, ENST00000480738.1, ENST00000494576.5

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTGTCGCCACAGGTTGAAGACCCAAGCCCTGAGGAGAACCTGCTaGCAGGGGGCTGGCTGGCTGCGAGCCAGGAGGGCCAGGCAGTTA +
Preference number: 1 (lower is better)
Translates to: SCRHRLKTQALRRTC*QGAGWLRARRARQL
Trigger: TAACTGCCTGGCCCTCCTGGCTCGCAGCCAGCCAGCCCCCTGGCAGCAGGTTCTCCTCAGGGCTTGGGTCTTCAACCTGTGGCGACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CCA 90 bp CCCTGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTaGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGC +
Preference number: 1 (lower is better)
Translates to: PCHREGQARDRFSSS*AEPMPGQPQSALVS
Trigger: GCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 90 bp CCACAAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTGATCTaGTGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCC +
Preference number: 1 (lower is better)
Translates to: PQEHQHQRCSVPGLI*WWGPRTVTRLPVRS
Trigger: GGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR GCA 90 bp CCCCTGCCTTCCCTCTCCCTGACCTGCATCCTGTCCTCCACAGTCTaGCCTGCCTCCTGTCGCCACAGGTTGAAGACCCAAGCCCTGAGG +
Preference number: 1 (lower is better)
Translates to: PLPSLSLTCILSSTV*PASCRHRLKTQALR
Trigger: CCTCAGGGCTTGGGTCTTCAACCTGTGGCGACAGGAGGCAGGGCAGACTGTGGAGGACAGGATGCAGGTCAGGGAGAGGGAAGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 90 bp TCTTCCCACAAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTaGTCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCC +
Preference number: 1 (lower is better)
Translates to: SSHKNISTRDARSPG*SDGGDHALSLGCRS
Trigger: GGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CCA 90 bp CACACTAAAACGGCAACAGTCTTGCGGTTGAGGGCAGGGGTGCGGTaGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGAGATGCTC +
Preference number: 1 (lower is better)
Translates to: HTKTATVLRLRAGVR*NLPLPTRTSAPEML
Trigger: GAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTGCCGTTTTAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CCA 90 bp TTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATaGCGGTCCACCCCTGCCTTCCCTCTCCCTGACCTGCATCCTGTC +
Preference number: 1 (lower is better)
Translates to: LHIARVNLLRVFSCS*RSTPAFPLPDLHPV
Trigger: GACAGGATGCAGGTCAGGGAGAGGGAAGGCAGGGGTGGACCGCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 90 bp ACCAATAAACATGTGGAGGACAAAATGAGAATGCTGGTAGGACACTaGGACTCTGGAAAAGACTGTGCTAGGATAGACACTTGTTCTGGC +
Preference number: 1 (lower is better)
Translates to: TNKHVEDKMRMLVGH*DSGKDCARIDTCSG
Trigger: GCCAGAACAAGTGTCTATCCTAGCACAGTCTTTTCCAGAGTCTCAGTGTCCTACCAGCATTCTCATTTTGTCCTCCACATGTTTATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR TCA 90 bp TATCGAAAGCACCACATTTTAGCCACAACACACATTAACTCACACTaGAACCCTGGACTACTTCATTTTCTCTGCAGGCTGCTTCCTGTC +
Preference number: 1 (lower is better)
Translates to: YRKHHILATTHINSH*NPGLLHFLCRLLPV
Trigger: GACAGGAAGCAGCCTGCAGAGAAAATGAAGTAGTCCAGGGTTTCAGTGTGAGTTAATGTGTGTTGTGGCTAAAATGTGGTGCTTTCGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR GCA 90 bp TTTGATACATCGTTGCTCATTTTGCAGAACATAACAGTTGCACATTaGAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCGGTC +
Preference number: 1 (lower is better)
Translates to: FDTSLLILQNITVAH*KSQLASGLFMLMAV
Trigger: GACCGCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTTCTGCAAAATGAGCAACGATGTATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGCAACAGTCTTGCGGTTaGGGGCAGGGGTGCGGTGGA +
Preference number: 2 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGQQSCG*GQGCGG
Trigger: TCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTG...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGGCTCGGTCCCCGGGCTaGTCTGATGGTGGGGACCAC +
Preference number: 2 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRARSPG*SDGGDH
Trigger: GTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGC...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCGCTCGGTCCCCGGGCTaGTCTGATGGTGGGGACCAC +
Preference number: 2 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSARSPG*SDGGDH
Trigger: GTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGC...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGTGGCCTGGAACAGCTTaGGGGAGGATTCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGWPGTA*GRIQLP
Trigger: AGGGAGCTGAATCCTCCCCCAAGCTGTTCCAGGCCA...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGCAGAGTCCTCTGGCCTaGAACAGCTTGGGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGQSPLA*NSLGED
Trigger: ATCCTCCCCCAAGCTGTTCCAGGCCAGAGGACTCTG...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGCAACAGTCTTGCGGTTaGGGGCAGGGGTGCGGTGGA +
Preference number: 2 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRQQSCG*GQGCGG
Trigger: TCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTG...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGGTCCCCGGGCTGATCTaGTGGTGGGGACCACGCACT +
Preference number: 2 (lower is better)
Translates to: ARDRFSSSWAEPMPGQPQVPGLI*WWGPRT
Trigger: AGTGCGTGGTCCCCACCATCAGATCAGCCCGGGGAC...CTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCCCTAGTCAGCCCATGTaGCTCCAGGAAGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: CHREGQARDRFSSSWAEPPSQPM*LQEACC
Trigger: ACAGCAGGCTTCCTGGAGCCACATGGGCTGACTAGG...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp ACAGAGCCTGACACACCCGGTGCCCAGCACCAGTTAGAGAAGGCTGAATGTGAAGAGTGGAGGCAATGGTaGGGCGAGGCGAGGCGAGGC +
Preference number: 2 (lower is better)
Translates to: TEPDTPGAQHQLEKAECEEWRQW*GEARRG
Trigger: GCCTCGCCTCGCCTCGCCTCACCATTGCCTCCACTC...TTCACATTCAGCCTTCTCTAACTGGTGCTGGGCACCGGGTGTGTCAGGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR-3UTR GCA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCATTCCCCATCTGGAGTaGCATTCAACTGCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSIPHLE*HSTACR
Trigger: TCTGCAGGCAGTTGAATGGCACTCCAGATGGGGAAT...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGCAGCAATTCCCCATCTaGAGTGCCATTCAACTGCCT +
Preference number: 2 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRQQFPI*SAIQLP
Trigger: AGGCAGTTGAATGGCACTCCAGATGGGGAATTGCTG...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGATTCAAAACGAGTGCTaGCTCTCCAACCTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRIQNEC*LSNLGK
Trigger: TTTCCCTAGGTTGGAGAGTCAGCACTCGTTTTGAAT...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCCTGACATGTCCTTTGTaGAGTAACATTACCCTCTCC +
Preference number: 2 (lower is better)
Translates to: CHREGQARDRFSSSWAEPLTCPL*SNITLS
Trigger: GGAGAGGGTAATGTTACTTCACAAAGGACATGTCAG...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp GCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGACACGGCGCTGCATACTaGAACTTCGTCAGTGTTGGC +
Preference number: 2 (lower is better)
Translates to: ARIDTCSGVSGGNGEARRHGAAY*NFVSVG
Trigger: GCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTG...TCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR-3UTR GCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGCATCAGCACCAGAGATaGTCGGTCCCCGGGCTGATC +
Preference number: 2 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGHQHQR*SVPGLI
Trigger: GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATG...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp CACCATTCTTTGTTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGCACTGTCACTCGGCTaGCGGTCCGGTCCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: HHSLLLDVGEGTAESSGLALSLG*RSGPSV
Trigger: AACACTGGGACCGGACCGGCAGCCGAGTGACAGTGC...CAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCAGGGCAGGGGTGCGGTaGAACCTCCCTCTTCCCACA +
Preference number: 2 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGRAGVR*NLPLPT
Trigger: TGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCT...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCCGTTTCTCCTCTTCCTaGGCTGAGCCCATGCCAGGC +
Preference number: 2 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGRFSSS*AEPMPG
Trigger: GCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACG...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp GGCACTAGGTACTTGCATGAGTTGGGTACTGGGTTAGGGCCTTGCATGGATCTGATGCTGGTAGGACACTaGGACTCTGGAAAAGACTGT +
Preference number: 2 (lower is better)
Translates to: GTRYLHELGTGLGPCMDLMLVGH*DSGKDC
Trigger: ACAGTCTTTTCCAGAGTCTCAGTGTCCTACCAGCAT...CAGATCCATGCAAGGCCCTAACCCAGTACCCAACTCATGCAAGTACCTAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR-3UTR CCA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTAGGGCAGGGGTGCGGTaGAACCTCCCTCTTCCCACA +
Preference number: 2 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSRAGVR*NLPLPT
Trigger: TGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCT...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTCATCAGCACCAGAGATaGTCGGTCCCCGGGCTGATC +
Preference number: 2 (lower is better)
Translates to: SFMENSRTLNQCMVITILHQHQR*SVPGLI
Trigger: GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATG...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGAGGCCAGCCACAGAGTaGCCTAGTCAGCCCATGTGG +
Preference number: 2 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMRPATE*PSQPMW
Trigger: CCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCT...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp CACCATTCTTTGTTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGTCACGACGCAGGAGATaGCATGTTACAGTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: HHSLLLDVGEGTAESSGLSRRRR*HVTVRG
Trigger: CCCTCTTACTGTAACATGTCATCTCCTGCGTCGTGA...CAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCTGTAGGAGAAGGTACTaGAGAGTCCTCTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGCRRRY*RVLWPG
Trigger: TCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACA...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CAA 90 bp GGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTaGTTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: GELQNLEPVHGYHHS*LLDVGEGTAESSGL
Trigger: CAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp CACCATTCTTTGTTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGCTGACATGTCCTTTGTaGAGTAACATTACCCTCTCC +
Preference number: 2 (lower is better)
Translates to: HHSLLLDVGEGTAESSGLLTCPL*SNITLS
Trigger: GGAGAGGGTAATGTTACTTCACAAAGGACATGTCAG...CAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGTGTAGGAGAAGGTACTaGAGAGTCCTCTGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMCRRRY*RVLWPG
Trigger: TCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACA...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR TCA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTCACGACGCAGGAGATaGCATGTTACAGTAAGAGGG +
Preference number: 2 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSSRRRR*HVTVRG
Trigger: CCCTCTTACTGTAACATGTCATCTCCTGCGTCGTGA...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCGGAGTGCCATTCAACTaGCTGCAGAAATCTTCCATT +
Preference number: 2 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGGVPFN*LQKSSI
Trigger: AATGGAAGATTTCTGCAGGCAGTTGAATGGCACTCC...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGAGAACCTTGAACCAGTaGATGGTTATCACCATTCTT +
Preference number: 2 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMRTLNQ*MVITIL
Trigger: AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCT...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR GCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCAGAACCTTGAACCAGTaGATGGTTATCACCATTCTT +
Preference number: 2 (lower is better)
Translates to: NITVAHCKSQLASGLFMLRTLNQ*MVITIL
Trigger: AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCT...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CAA 90 bp TATCAACATCTAAATTTGCATCAATTTGATACATCGTTGCTCATTTaGCAGAACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCG +
Preference number: 2 (lower is better)
Translates to: YQHLNLHQFDTSLLI*QNITVAHCKSQLAS
Trigger: CGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTTCTGCAAAATGAGCAACGATGTATCAAATTGATGCAAATTTAGATGTTGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CAA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCGCAACAGTCTTGCGGTaGAGGGCAGGGGTGCGGTGG +
Preference number: 3 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSATVLR*RAGVRW
Trigger: CCACCGCACCCCTGCCCTCAACCGCAAGACTGTTGC...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CAA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAAAAACGGCAACAGTCTaGCGGTTGAGGGCAGGGGTG +
Preference number: 3 (lower is better)
Translates to: AASQEGQAVSPATGRGRQKTATV*RLRAGV
Trigger: CACCCCTGCCCTCAACCGCAAGACTGTTGCCGTTTT...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 72 bp CATCAGCACCAGAGATGCTCGGTCCCCGGGCTGATCTaGTGGTGGGGACCACGCACTGTCACTCGGCTGCCG +
Preference number: 3 (lower is better)
Translates to: HQHQRCSVPGLI*WWGPRTVTRLP
Trigger: CGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CCA 72 bp AGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTaGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGCC +
Preference number: 3 (lower is better)
Translates to: REGQARDRFSSS*AEPMPGQPQSA
Trigger: GGCACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 72 bp AGGGCCTTGCATGGATCTGGTCTCCCTCATAGACGGTaGGCTCCCTTGAGGGCTGGCACCAGGCCTGGCTTG +
Preference number: 3 (lower is better)
Translates to: RALHGSGLPHRR*APLRAGTRPGL
Trigger: CAAGCCAGGCCTGGTGCCAGCCCTCAAGGGAGCTCACCGTCTATGAGGGAGACCAGATCCATGCAAGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR TCA 72 bp AAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTaGTCTGATGGTGGGGACCACGCACTGTCACTCGGC +
Preference number: 3 (lower is better)
Translates to: KNISTRDARSPG*SDGGDHALSLG
Trigger: GCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CCA 72 bp ACGGCAACAGTCTTGCGGTTGAGGGCAGGGGTGCGGTaGAACCTCCCTCTTCCCACAAGAACATCAGCACCA +
Preference number: 3 (lower is better)
Translates to: TATVLRLRAGVR*NLPLPTRTSAP
Trigger: TGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR GCA 72 bp CACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATaGTCATGGCGGTCCACCCCTGCCTTCCCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: HIARVNLLRVFS*SWRSTPAFPLP
Trigger: AGGGAGAGGGAAGGCAGGGGTGGACCGCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR GCA 72 bp AGGTACTTGCATGAGTTGGGTACTGGGTTAGGGCCTTaGATGGATCTGGTCTCCCTCATAGACGGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: RYLHELGTGLGP*MDLVSLIDGEL
Trigger: GAGCTCACCGTCTATGAGGGAGACCAGATCCATGCAAGGCCCTAACCCAGTACCCAACTCATGCAAGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR-3UTR CAA 90 bp GCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGGGTTATCACCATTCTTaGTTACTAGATGTAGGAGAA +
Preference number: 3 (lower is better)
Translates to: ARDRFSSSWAEPMPGQPQGYHHS*LLDVGE
Trigger: TTCTCCTACATCTAGTAACAAAGAATGGTGATAACC...CTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR GCA 72 bp GCAGAACATAACAGTTGCACATTGCAAGAGTCAACTTaGTTCGGGTCTTTTCATGCTCATGGCGGTCCACCC +
Preference number: 3 (lower is better)
Translates to: AEHNSCTLQEST*FGSFHAHGGPP
Trigger: GGGTGGACCGCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR-3UTR CAA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTAAAACGGCAACAGTCTaGCGGTTGAGGGCAGGGGTG +
Preference number: 3 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSKTATV*RLRAGV
Trigger: CACCCCTGCCCTCAACCGCAAGACTGTTGCCGTTTT...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 72 bp CATGTGGAGGACAAAATGAGAATGCTGGTAGGACACTaGGACTCTGGAAAAGACTGTGCTAGGATAGACACT +
Preference number: 3 (lower is better)
Translates to: HVEDKMRMLVGH*DSGKDCARIDT
Trigger: AGTGTCTATCCTAGCACAGTCTTTTCCAGAGTCTCAGTGTCCTACCAGCATTCTCATTTTGTCCTCCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR-3UTR CAA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGAGAACTCCAGAACCTaGAACCAGTGCATGGTTATC +
Preference number: 3 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMENSRT*NQCMVI
Trigger: GATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTC...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR TCA 72 bp AAATTAACCCAAGTTTCATGGAGAACTCCAGAACCTTaGACCAGTGCATGGTTATCACCATTCTTTGTTACT +
Preference number: 3 (lower is better)
Translates to: KLTQVSWRTPEP*TSAWLSPFFVT
Trigger: AGTAACAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTTGGGTTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAATGCCAGGGGGCTGGCTaGCTGCGAGCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AASQEGQAVSPATGRGRQCQGAG*LRARRA
Trigger: GGCCCTCCTGGCTCGCAGCCAGCCAGCCCCCTGGCA...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGCCCGAGGGTCCCCGCTaGCCCAGCCTCCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRPEGPR*PSLLKE
Trigger: CTCTTTGAGGAGGCTGGGGCAGCGGGGACCCTCGGG...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR GCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGAGGCCAGCCACAGAGTaGCCTAGTCAGCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGRPATE*PSQPMW
Trigger: CCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCT...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCGCTCGGTCCCCGGGCTaGTCTGATGGTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPARSPG*SDGGDH
Trigger: GTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGC...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GGCGAGGCGAGGCGAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTGGCTGACGGTGAGCTCCCTTaGGGGCTGGCACCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GEARRGTALHTATSSVLADGELP*GLAPGL
Trigger: CAGGCCTGGTGCCAGCCCTCAAGGGAGCTCACCGTC...AGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTCGCCTCGCCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCGCACTGTCACTCGGCTaGCGGTCCGGTCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVALSLG*RSGPSV
Trigger: AACACTGGGACCGGACCGGCAGCCGAGTGACAGTGC...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCGCCCTGAGGAGAACCTaGTGCCAGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPALRRT*CQGAGW
Trigger: CCAGCCAGCCCCCTGGCAGCAGGTTCTCCTCAGGGC...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGGTCCGGTCCCAGTGTTaGCCTGGGACTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGVRSQC*PGTISA
Trigger: AGCACTGATAGTCCCAGGCCAACACTGGGACCGGAC...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGCCTAGTCAGCCCATGTaGCTCCAGGAAGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGPSQPM*LQEACC
Trigger: ACAGCAGGCTTCCTGGAGCCACATGGGCTGACTAGG...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGCTCCCTTGTGCAAACTaGGAGAACATCAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGLPCAN*ENISCR
Trigger: CCGGCAGCTGATGTTCTCTCAGTTTGCACAAGGGAG...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGGCTCGGTCCCCGGGCTaGTCTGATGGTGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVARSPG*SDGGDH
Trigger: GTGGTCCCCACCATCAGATCAGCCCGGGGACCGAGC...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCCAACAGTCTTGCGGTTaGGGGCAGGGGTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSQQSCG*GQGCGG
Trigger: TCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTG...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCGCCTCCTCAAAGAGGTaGCTAGGGTGGCGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVASSKR*LGWRVG
Trigger: CCCTACACGCCACCCTAGGCACCTCTTTGAGGAGGC...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGCTCCCATCCCAATTCTaGCTTCGCTGGTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGLPSQF*LRWWVL
Trigger: CAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAG...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGAGTTCGGACGCGGGTCTaGAGGGTCGGCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRVRTRV*RVGPTT
Trigger: GGTGGTGGGGCCGACCCTCCAGACCCGCGTCCGAAC...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR TCA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAAAAATCCCATCTCCATaGGCCGGGCGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: AASQEGQAVSPATGRGRQKIPSP*AGRPVP
Trigger: AGGAACAGGTCGCCCGGCTCATGGAGATGGGATTTT...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGCATCAGCACCAGAGATaGTCGGTCCCCGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRHQHQR*SVPGLI
Trigger: GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATG...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAACTTCGGGTCTTTTCATaGTCATGGCGGTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: AASQEGQAVSPATGRGRQLRVFS*SWRSTP
Trigger: AGGGGTGGACCGCCATGAGCATGAAAAGACCCGAAG...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCAAGAGGTGCCTAGGGTaGCGTGTAGGGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPKRCLG*RVGGSQ
Trigger: CTGGCTGCCCCCTACACGCCACCCTAGGCACCTCTT...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGAGCTCCGCAAAGGGCCTaGGGCCGGCCCACGAGAACA +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRAPQRA*GRPTRT
Trigger: TGTTCTCGTGGGCCGGCCCCAGGCCCTTTGCGGAGC...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCGTCCCAGTGTTGGCCTaGGACTATCAGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVVPVLA*DYQCCS
Trigger: GCTGCAGCACTGATAGTCCCAGGCCAACACTGGGAC...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCGTCCGGTCCCAGTGTTaGCCTGGGACTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVVRSQC*PGTISA
Trigger: AGCACTGATAGTCCCAGGCCAACACTGGGACCGGAC...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAATTGATCATTCCTCCCTaGTGCTGTCTCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: AASQEGQAVSPATGRGRQLIIPP*CCLCRL
Trigger: GAGGCGACAGAGACAGCAGCAGGGAGGAATGATCAA...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGAGGGCAGGGGTGCGGTaGAACCTCCCTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVRAGVR*NLPLPT
Trigger: TGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCT...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGTGGCCTGGAACAGCTTaGGGGAGGATTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DLMVGTTHCHSAAGPVPVWPGTA*GRIQLP
Trigger: AGGGAGCTGAATCCTCCCCCAAGCTGTTCCAGGCCA...CACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGATCATTCCTCCCTGCTaGTGTCTCTGTCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: DLMVGTTHCHSAAGPVPVIIPPC*CLCRLP
Trigger: AGGGAGGCGACAGAGACAGCAGCAGGGAGGAATGAT...CACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGATCATTCCTCCCTGCTaGTGTCTCTGTCGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRIIPPC*CLCRLP
Trigger: AGGGAGGCGACAGAGACAGCAGCAGGGAGGAATGAT...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TCCCTCTTCCCACAAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTGATCGAACACCAGGGCACCTaGCCACTTGCAGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLFPQEHQHQRCSVPGLIEHQGT*PLAAAP
Trigger: TGGGGCCGCTGCAAGTGGGCAGGTGCCCTGGTGTTC...GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR GCA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACAGCACTGTCACTCGGCTaGCGGTCCGGTCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTALSLG*RSGPSV
Trigger: AACACTGGGACCGGACCGGCAGCCGAGTGACAGTGC...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGACACAGGTGCCAGGCTaGAAGTCGTTCTTGACTGCG +
Preference number: 4 (lower is better)
Translates to: DLMVGTTHCHSAAGPVPVTQVPG*KSFLTA
Trigger: CGCAGTCAAGAACGACTTCCAGCCTGGCACCTGTGT...CACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CCA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACAAGGGCAGGGGTGCGGTaGAACCTCCCTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTRAGVR*NLPLPT
Trigger: TGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCT...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGCGTTTCTCCTCTTCCTaGGCTGAGCCCATGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVRFSSS*AEPMPG
Trigger: GCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACG...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCTTCGCTGGTGGGTTCTaGAGAAGAGAAGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVFAGGF*RREDGF
Trigger: GAACCCATCTTCTCTTCTTCAGAACCCACCAGCGAA...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCCTCCCTTGTGCAAACTaGGAGAACATCAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPLPCAN*ENISCR
Trigger: CCGGCAGCTGATGTTCTCTCAGTTTGCACAAGGGAG...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGTCAATGTCTTGTTTGTaGTGGACAACGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGSMSCL*WTTDPE
Trigger: TTCTGGGTCCGTTGTCCATCACAAACAAGACATTGA...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCATTCCCCATCTGGAGTaGCATTCAACTGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVIPHLE*HSTACR
Trigger: TCTGCAGGCAGTTGAATGGCACTCCAGATGGGGAAT...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGTGTAGGAGAAGGTACTaGAGAGTCCTCTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRCRRRY*RVLWPG
Trigger: TCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACA...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCAGCAATTCCCCATCTaGAGTGCCATTCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVQQFPI*SAIQLP
Trigger: AGGCAGTTGAATGGCACTCCAGATGGGGAATTGCTG...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAATCAATGTCTTGTTTGTaGTGGACAACGGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: AASQEGQAVSPATGRGRQSMSCL*WTTDPE
Trigger: TTCTGGGTCCGTTGTCCATCACAAACAAGACATTGA...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGTCACGACGCAGGAGATaGCATGTTACAGTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRSRRRR*HVTVRG
Trigger: CCCTCTTACTGTAACATGTCATCTCCTGCGTCGTGA...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCCTGTCGCCTCCCTTGTaGAAACTGAGAGAACATCAG +
Preference number: 4 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSLSPPL*KLREHQ
Trigger: CTGATGTTCTCTCAGTTTGCACAAGGGAGGCGACAG...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGATGGCCTGGAACAGCTTaGGGGAGGATTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRWPGTA*GRIQLP
Trigger: AGGGAGCTGAATCCTCCCCCAAGCTGTTCCAGGCCA...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGAAGCTCCCTTGAGGGCTaGCACCAGGCCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ARIDTCSGVSGGNGEARRSSLEG*HQAWLA
Trigger: AGCAAGCCAGGCCTGGTGCCAGCCCTCAAGGGAGCT...TCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGTTGGTGGCGACATTaGGGTCATTGTTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSSWWRH*GHCLKL
Trigger: GAGCTTCAAACAATGACCTCAATGTCGCCACCAACT...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCTGACATGTCCTTTGTaGAGTAACATTACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVLTCPL*SNITLS
Trigger: GGAGAGGGTAATGTTACTTCACAAAGGACATGTCAG...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GGCACTAGGTACTTGCATGAGTTGGGTACTGGGTTAGGGCCTTGCATGGATCTGCCCCAACACAGAGCCTaGCACACCCGGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTRYLHELGTGLGPCMDLPQHRA*HTRCPA
Trigger: TGCTGGGCACCGGGTGTGTCAGGCTCTGTGTTGGGG...CAGATCCATGCAAGGCCCTAACCCAGTACCCAACTCATGCAAGTACCTAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGATGGGACTATCAGTGCTaGAGCAGGAAGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRWDYQC*SRKLVA
Trigger: CGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCA...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATGGGACTATCAGTGCTaGAGCAGGAAGTTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTWDYQC*SRKLVA
Trigger: CGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCA...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACACTTCGGGTCTTTTCATaGTCATGGCGGTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTLRVFS*SWRSTP
Trigger: AGGGGTGGACCGCCATGAGCATGAAAAGACCCGAAG...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGATAACAGTTGCACATTaGAAGAGTCAACTTGCTTCG +
Preference number: 4 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGITVAH*KSQLAS
Trigger: CGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGCAATTCTGGCTTCGCTaGTGGGTTCTGAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DLMVGTTHCHSAAGPVPVQFWLR*WVLKKR
Trigger: TCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTG...CACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp TCCCTCTTCCCACAAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTGATCCAGAGTCCTCTGGCCTaGAACAGCTTGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLFPQEHQHQRCSVPGLIQSPLA*NSLGED
Trigger: ATCCTCCCCCAAGCTGTTCCAGGCCAGAGGACTCTG...GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCTCGTTCTTGACTGCGTaGAGGTCATACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPSFLTA*RSYTKS
Trigger: GCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGA...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCATTGAGGTCATTGTTTaGAGCTCTCAGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSIEVIV*SSQGFQ
Trigger: TTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAAT...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGAGAACTCCAGAACCTTaGACCAGTGCATGGTTATCA +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRRTPEP*TSAWLS
Trigger: TGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCT...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGAGCACCTGGAACATTTTaGTGTCGTAGCACAGACCGG +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRAPGTF*CRSTDR
Trigger: CCGGTCTGTGCTACGACAGCAAAATGTTCCAGGTGC...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAAGAACCTTGAACCAGTaGATGGTTATCACCATTCTT +
Preference number: 4 (lower is better)
Translates to: AASQEGQAVSPATGRGRQRTLNQ*MVITIL
Trigger: AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCT...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGCAGCAATTCCCCATCTaGAGTGCCATTCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVQQFPI*SAIQLP
Trigger: AGGCAGTTGAATGGCACTCCAGATGGGGAATTGCTG...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGATCAACCTCCAAATCTaGAAGTCGTTCTTGACTGCG +
Preference number: 4 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRINLQI*KSFLTA
Trigger: CGCAGTCAAGAACGACTTCCAGATTTGGAGGTTGAT...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403766.8
CDS-3UTR TCA 90 bp GCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGTCGTTCTTGACTGCGTaGAGGTCATACACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ARDRFSSSWAEPMPGQPQSFLTA*RSYTKS
Trigger: GCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGA...CTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCTTTACGTTTTGTCGCTaGCGTAAAGGAGGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVFTFCR*RKGGKR
Trigger: TCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAA...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATTGAGGTCATTGTTTaGAGCTCTCAGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPIEVIV*SSQGFQ
Trigger: TTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAAT...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGCAACAGTCTTGCGGTTaGGGGCAGGGGTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGQQSCG*GQGCGG
Trigger: TCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTG...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCGGAGTGCCATTCAACTaGCTGCAGAAATCTTCCATT +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPGVPFN*LQKSSI
Trigger: AATGGAAGATTTCTGCAGGCAGTTGAATGGCACTCC...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCAGAACCTTGAACCAGTaGATGGTTATCACCATTCTT +
Preference number: 4 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVRTLNQ*MVITIL
Trigger: AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCT...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGCTGTCCTCCACAGTCTaGCCTGCCTCCTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGLSSTV*PASCRH
Trigger: GTGGCGACAGGAGGCAGGGCAGACTGTGGAGGACAG...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGACAGAGCAAACACAGGTaGCAGGAATCCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRQSKHR*QESRRQ
Trigger: TTGCCTTCTGGATTCCTGGCACCTGTGTTTGCTCTG...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403766.8
CDS-3UTR TCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGATCTGGAAGTCGTTCTTaGCTGCGTGAAGGTCATACA +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRSGSRS*LREGHT
Trigger: TGTATGACCTTCACGCAGTCAAGAACGACTTCCAGA...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403766.8
CDS-3UTR TCA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATGTAGGAACCAGAGGTaGAAAGCTGCAGTCCCAATA +
Preference number: 4 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTCRNQR*KAAVPI
Trigger: TATTGGGACTGCAGCTTTTCACCTCTGGTTCCTACA...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGAAGTTGGTGGCGACATTaGGGTCATTGTTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRSWWRH*GHCLKL
Trigger: GAGCTTCAAACAATGACCTCAATGTCGCCACCAACT...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGCTGACATGTCCTTTGTaGAGTAACATTACCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVLTCPL*SNITLS
Trigger: GGAGAGGGTAATGTTACTTCACAAAGGACATGTCAG...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp ACAGAGCCTGACACACCCGGTGCCCAGCACCAGTTAGAGAAGGCTGAATGTGAAACACTTGTTCTGGCGTaGGTGGAGGCAATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TEPDTPGAQHQLEKAECETLVLA*VEAMVR
Trigger: CCTCACCATTGCCTCCACTCACGCCAGAACAAGTGT...TTCACATTCAGCCTTCTCTAACTGGTGCTGGGCACCGGGTGTGTCAGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCGAAGTCGTTCTTGACTaGGTGAAGGTCATACACAAA +
Preference number: 4 (lower is better)
Translates to: CHREGQARDRFSSSWAEPEVVLD*VKVIHK
Trigger: TTTGTGTATGACCTTCACGCAGTCAAGAACGACTTC...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGACGGACCCAGAATTTGTaGCACTTGGACTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRRTQNL*HLDSWY
Trigger: ATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCG...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GACTGTGCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGACTGGGTTAGGGCCTTaGATGGATCTGGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: DCARIDTCSGVSGGNGEATGLGP*MDLVSL
Trigger: GAGGGAGACCAGATCCATGCAAGGCCCTAACCCAGT...CGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CCA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGACAATTCTGGCTTCGCTaGTGGGTTCTGAAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRQFWLR*WVLKKR
Trigger: TCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTG...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGTGCCACTTGGACTCTTaGTATGGAGCAGTAAAATGG +
Preference number: 4 (lower is better)
Translates to: ARDRFSSSWAEPMPGQPQCHLDS*YGAVKW
Trigger: CCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCA...CTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp TTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTGTGCCAGGGGGCTGGCTaGCTGCGAGCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FHGELQNLEPVHGYHHSLCQGAG*LRARRA
Trigger: GGCCCTCCTGGCTCGCAGCCAGCCAGCCCCCTGGCA...CAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CAA 72 bp TGGCAAACTTATCTCCACACTAAAACGGCAACAGTCTaGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCT +
Preference number: 4 (lower is better)
Translates to: WQTYLHTKTATV*RLRAGVRWNLP
Trigger: AGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGACTGTTGCCGTTTTAGTGTGGAGATAAGTTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGGAAGTCGTTCTTGACTaGGTGAAGGTCATACACAAA +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVEVVLD*VKVIHK
Trigger: TTTGTGTATGACCTTCACGCAGTCAAGAACGACTTC...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp GCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGACAACTTCGTCAGTGTTaGCTTCATGGGCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ARIDTCSGVSGGNGEARRQLRQC*LHGLAV
Trigger: GACTGCAAGCCCATGAAGCCAACACTGACGAAGTTG...TCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCTGGAGCCGGTGCTGGTaGACATGGTCCCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLWSRCW*TWSRRA
Trigger: AGCCCGGCGGGACCATGTTCACCAGCACCGGCTCCA...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403766.8
CDS-3UTR TCA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGTTTACGTTTTGTCGCTaGCGTAAAGGAGGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVFTFCR*RKGGKR
Trigger: TCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAA...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGAAAATCCCATCTCCATaGGCCGGGCGACCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGKIPSP*AGRPVP
Trigger: AGGAACAGGTCGCCCGGCTCATGGAGATGGGATTTT...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTGGGGGCGGTTTCCGCTaGCCCCCAAGACCGGGAACT +
Preference number: 4 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSGGGFR*PPRPGT
Trigger: AGTTCCCGGTCTTGGGGGTCAGCGGAAACCGCCCCC...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR TCA 90 bp GCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGAATGCTGGTAGGACACTaGGACTCTGGAAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: ARIDTCSGVSGGNGEARRMLVGH*DSGKDC
Trigger: ACAGTCTTTTCCAGAGTCTCAGTGTCCTACCAGCAT...TCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp ACAGAGCCTGACACACCCGGTGCCCAGCACCAGTTAGAGAAGGCTGAATGTGAACTCACCATGAGCACCTaGTCCGATCTAACATCCACA +
Preference number: 4 (lower is better)
Translates to: TEPDTPGAQHQLEKAECELTMST*SDLTST
Trigger: TGTGGATGTTAGATCGGATCAGGTGCTCATGGTGAG...TTCACATTCAGCCTTCTCTAACTGGTGCTGGGCACCGGGTGTGTCAGGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp CACCATTCTTTGTTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGAGGCCAGCCACAGAGTaGCCTAGTCAGCCCATGTGG +
Preference number: 4 (lower is better)
Translates to: HHSLLLDVGEGTAESSGLRPATE*PSQPMW
Trigger: CCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCT...CAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTGCCCTGAGGAGAACCTaGTGCCAGGGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFMENSRTLNQCMVITILALRRT*CQGAGW
Trigger: CCAGCCAGCCCCCTGGCAGCAGGTTCTCCTCAGGGC...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp ACAGAGCCTGACACACCCGGTGCCCAGCACCAGTTAGAGAAGGCTGAATGTGAACTGGCACTAGGTACTTaGATGAGTTGGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: TEPDTPGAQHQLEKAECELALGT*MSWVLG
Trigger: ACCCAGTACCCAACTCATGCAAGTACCTAGTGCCAG...TTCACATTCAGCCTTCTCTAACTGGTGCTGGGCACCGGGTGTGTCAGGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp ATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGAGGCGAGCTACTTCATTTTCTCTaGAGGCTGCTTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: IDTCSGVSGGNGEARRGELLHFL*RLLPVS
Trigger: AGAGACAGGAAGCAGCCTGCAGAGAAAATGAAGTAG...CTCGCCTCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGTCTGGATGTCCAGCGTaGCTCCCATCCCAATTCTGG +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGSGCPA*LPSQFW
Trigger: CCAGAATTGGGATGGGAGCCACGCTGGACATCCAGA...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp ATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGAGGCGAGTCAGTGTTGGCTTCATaGGCTTGCAGTCATTCATTG +
Preference number: 4 (lower is better)
Translates to: IDTCSGVSGGNGEARRGESVLAS*ACSHSL
Trigger: CAATGAATGACTGCAAGCCCATGAAGCCAACACTGA...CTCGCCTCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
3UTR CAA 72 bp TCTGCTCTAAGGACTGGCACTAGGTACTTGCATGAGTaGGGTACTGGGTTAGGGCCTTGCATGGATCTGGTC +
Preference number: 4 (lower is better)
Translates to: SALRTGTRYLHE*GTGLGPCMDLV
Trigger: GACCAGATCCATGCAAGGCCCTAACCCAGTACCCAACTCATGCAAGTACCTAGTGCCAGTCCTTAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTGTCCCCGGGCTGATCTaGTGGTGGGGACCACGCACT +
Preference number: 4 (lower is better)
Translates to: SFMENSRTLNQCMVITILVPGLI*WWGPRT
Trigger: AGTGCGTGGTCCCCACCATCAGATCAGCCCGGGGAC...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACAGCAGAACATAACAGTTaGACATTGCAAGAGTCAACT +
Preference number: 4 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTAEHNS*TLQEST
Trigger: AGTTGACTCTTGCAATGTGCAACTGTTATGTTCTGC...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCAGGCGCCTTGTCTGCTaGCCACCGCTAACACGCCAG +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLRRLVC*PPLTRQ
Trigger: CTGGCGTGTTAGCGGTGGTCAGCAGACAAGGCGCCT...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR TCA 90 bp GAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTGGCTTCATGGGCTTGCACACATTAACTCACACTaGAACCCTGGACTACTTCAT +
Preference number: 4 (lower is better)
Translates to: EARRCILQLRQCWLHGLAHINSH*NPGLLH
Trigger: ATGAAGTAGTCCAGGGTTTCAGTGTGAGTTAATGTG...TGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCCCATCCAGCTGGGGATaGAGAGCACCTGATGCACCT +
Preference number: 4 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGPSSWG*RAPDAP
Trigger: AGGTGCATCAGGTGCTCTGCATCCCCAGCTGGATGG...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGCTGTCCTCCACAGTCTaGCCTGCCTCCTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMLSSTV*PASCRH
Trigger: GTGGCGACAGGAGGCAGGGCAGACTGTGGAGGACAG...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCTCCCTCTCCCTGACCTaGATCCTGTCCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGSLSLT*ILSSTV
Trigger: GACTGTGGAGGACAGGATGCAGGTCAGGGAGAGGGA...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGATTTTGCCATCCAGCTaGGGATGCAGAGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGILPSS*GCRAPD
Trigger: ATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAAT...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCGTCCCAGTGTTGGCCTaGGACTATCAGTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGVPVLA*DYQCCS
Trigger: GCTGCAGCACTGATAGTCCCAGGCCAACACTGGGAC...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGATGTGAAGATCAAAAGTaGCCAATAAACATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ARIDTCSGVSGGNGEARRCEDQK*PINMWR
Trigger: CCTCCACATGTTTATTGGTCACTTTTGATCTTCACA...TCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCCATCAGCACCAGAGATaGTCGGTCCCCGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLHQHQR*SVPGLI
Trigger: GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATG...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TCCCTCTTCCCACAAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTGATCATGCCAAAGAAATACTaGATAGCTTCAATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLFPQEHQHQRCSVPGLIMPKKY*IASMRR
Trigger: TCTCCTCATTGAAGCTATGCAGTATTTCTTTGGCAT...GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403766.8
CDS-3UTR TCA 90 bp ACAGAGCCTGACACACCCGGTGCCCAGCACCAGTTAGAGAAGGCTGAATGTGAATTTACGTTTTGTCGCTaGCGTAAAGGAGGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TEPDTPGAQHQLEKAECEFTFCR*RKGGKR
Trigger: TCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAA...TTCACATTCAGCCTTCTCTAACTGGTGCTGGGCACCGGGTGTGTCAGGCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGATTCAAAACGAGTGCTaGCTCTCCAACCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGIQNEC*LSNLGK
Trigger: TTTCCCTAGGTTGGAGAGTCAGCACTCGTTTTGAAT...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTCCCTCTCCCTGACCTaGATCCTGTCCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: SFMENSRTLNQCMVITILSLSLT*ILSSTV
Trigger: GACTGTGGAGGACAGGATGCAGGTCAGGGAGAGGGA...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp ACTCACCATGAGCACCTGATCCGATCTAACATCCACAGGAAGAGAAAGTTTCAACACGGCGCTGCATACTaGAACTTCGTCAGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: THHEHLIRSNIHRKRKFQHGAAY*NFVSVG
Trigger: GCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTG...TTGAAACTTTCTCTTCCTGTGGATGTTAGATCGGATCAGGTGCTCATGGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGCAGAGTCCTCTGGCCTaGAACAGCTTGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMQSPLA*NSLGED
Trigger: ATCCTCCCCCAAGCTGTTCCAGGCCAGAGGACTCTG...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp GGCACTAGGTACTTGCATGAGTTGGGTACTGGGTTAGGGCCTTGCATGGATCTGGTTAAAGTACAGGAATaGATGTTTACAGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GTRYLHELGTGLGPCMDLVKVQE*MFTGLL
Trigger: GAGGAGACCTGTAAACATTCATTCCTGTACTTTAAC...CAGATCCATGCAAGGCCCTAACCCAGTACCCAACTCATGCAAGTACCTAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCCTGGGACTATCAGTaGTGCAGCAGGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMAWDYQ*CSRKLV
Trigger: CACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGC...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTGCCTGGGACTATCAGTaGTGCAGCAGGAAGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SFMENSRTLNQCMVITILAWDYQ*CSRKLV
Trigger: CACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGC...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGTTGCAAGAGTCAACTTaGTTCGGGTCTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGLQEST*FGSFHA
Trigger: AGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAA...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp TTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTGTCTGGATGTCCAGCGTaGCTCCCATCCCAATTCTGG +
Preference number: 4 (lower is better)
Translates to: FHGELQNLEPVHGYHHSLSGCPA*LPSQFW
Trigger: CCAGAATTGGGATGGGAGCCACGCTGGACATCCAGA...CAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTGGCACCTGGAACATTTTaGTGTCGTAGCACAGACCGG +
Preference number: 4 (lower is better)
Translates to: FHGELQNLEPVHGYHHSLAPGTF*CRSTDR
Trigger: CCGGTCTGTGCTACGACAGCAAAATGTTCCAGGTGC...CAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCTTGATCATTCCTCCCTaGTGCTGTCTCTGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLLIIPP*CCLCRL
Trigger: GAGGCGACAGAGACAGCAGCAGGGAGGAATGATCAA...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTGCAGAGCAAACACAGGTaGCAGGCTGGAAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: FHGELQNLEPVHGYHHSLQSKHR*QAGSRS
Trigger: AGAACGACTTCCAGCCTGGCACCTGTGTTTGCTCTG...CAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CCA 90 bp ACTCACCATGAGCACCTGATCCGATCTAACATCCACAGGAAGAGAAAGTTTCAAGATAGACACTTGTTCTaGCGTGAGTGGAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: THHEHLIRSNIHRKRKFQDRHLF*REWRQW
Trigger: CCATTGCCTCCACTCACGCCAGAACAAGTGTCTATC...TTGAAACTTTCTCTTCCTGTGGATGTTAGATCGGATCAGGTGCTCATGGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCAAAGACGATTCCAATTaGTCATTCCTCCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGKDDSN*SFLPAA
Trigger: AGCAGCAGGGAGGAATGATCAATTGGAATCGTCTTT...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCTGGAAGTCGTTCTTaGCTGCGTGAAGGTCATACA +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMAGSRS*LREGHT
Trigger: TGTATGACCTTCACGCAGTCAAGAACGACTTCCAGC...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR TCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCTCACGACGCAGGAGATaGCATGTTACAGTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLSRRRR*HVTVRG
Trigger: CCCTCTTACTGTAACATGTCATCTCCTGCGTCGTGA...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTCTGTCGCCTCCCTTGTaGAAACTGAGAGAACATCAG +
Preference number: 4 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSLSPPL*KLREHQ
Trigger: CTGATGTTCTCTCAGTTTGCACAAGGGAGGCGACAG...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTATTTTGCCATCCAGCTaGGGATGCAGAGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSILPSS*GCRAPD
Trigger: ATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAAT...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCTGTAGGAACCAGAGGTaGAAAGCTGCAGTCCCAATA +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLCRNQR*KAAVPI
Trigger: TATTGGGACTGCAGCTTTTCACCTCTGGTTCCTACA...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTCGGACCCAGAATTTGTaGCACTTGGACTCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSRTQNL*HLDSWY
Trigger: ATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCG...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp ACTCACCATGAGCACCTGATCCGATCTAACATCCACAGGAAGAGAAAGTTTCAATTGGCTTCATGGGCTTaGAGTCATTCATTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: THHEHLIRSNIHRKRKFQLASWA*SHSLVC
Trigger: ACAGACCAATGAATGACTGCAAGCCCATGAAGCCAA...TTGAAACTTTCTCTTCCTGTGGATGTTAGATCGGATCAGGTGCTCATGGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR TCA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTATTCAAAACGAGTGCTaGCTCTCCAACCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SFMENSRTLNQCMVITILIQNEC*LSNLGK
Trigger: TTTCCCTAGGTTGGAGAGTCAGCACTCGTTTTGAAT...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR TCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGAGAACTCCAGAACCTTaGACCAGTGCATGGTTATCA +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMRTPEP*TSAWLS
Trigger: TGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCT...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGGAGTGCCATTCAACTaGCTGCAGAAATCTTCCATT +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMGVPFN*LQKSSI
Trigger: AATGGAAGATTTCTGCAGGCAGTTGAATGGCACTCC...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCCTTGGACTCTTGGTATaGAGCAGTAAAATGGTACAA +
Preference number: 4 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGLGLLV*SSKMVQ
Trigger: TTGTACCATTTTACTGCTCCATACCAAGAGTCCAAG...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGTGCCACTTGGACTCTTaGTATGGAGCAGTAAAATGG +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMCHLDS*YGAVKW
Trigger: CCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCA...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGTTGCAAGAGTCAACTTaGTTCGGGTCTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMLQEST*FGSFHA
Trigger: AGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAA...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp ACTCACCATGAGCACCTGATCCGATCTAACATCCACAGGAAGAGAAAGTTTCAACTTGCAGTCATTCATTaGTCTGTTCCTCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: THHEHLIRSNIHRKRKFQLAVIH*SVPQKL
Trigger: AAGTTTCTGAGGAACAGACCAATGAATGACTGCAAG...TTGAAACTTTCTCTTCCTGTGGATGTTAGATCGGATCAGGTGCTCATGGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR GCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATAACAGTTGCACATTaGAAGAGTCAACTTGCTTCG +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLITVAH*KSQLAS
Trigger: CGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCGCAGAACATAACAGTTaGACATTGCAAGAGTCAACT +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLAEHNS*TLQEST
Trigger: AGTTGACTCTTGCAATGTGCAACTGTTATGTTCTGC...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CCA 90 bp AACATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCCTTGGACTCTTGGTATaGAGCAGTAAAATGGTACAA +
Preference number: 4 (lower is better)
Translates to: NITVAHCKSQLASGLFMLLGLLV*SSKMVQ
Trigger: TTGTACCATTTTACTGCTCCATACCAAGAGTCCAAG...GAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR GCA 90 bp TTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTGAGGCAAATTACTAGCTaGAGTGATGCCAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: FHGELQNLEPVHGYHHSLRQITS*SDAKEI
Trigger: TATTTCTTTGGCATCACTGCAGCTAGTAATTTGCCT...CAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403766.8
3UTR CAA 72 bp AAAATTAACCCAAGTTTCATGGAGAACTCCAGAACCTaGAACCAGTGCATGGTTATCACCATTCTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: KINPSFMENSRT*NQCMVITILCY
Trigger: GTAACAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTTGGGTTAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
3UTR CAA 72 bp CTAAATTTGCATCAATTTGATACATCGTTGCTCATTTaGCAGAACATAACAGTTGCACATTGCAAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LNLHQFDTSLLI*QNITVAHCKSQ
Trigger: TTGACTCTTGCAATGTGCAACTGTTATGTTCTGCAAAATGAGCAACGATGTATCAAATTGATGCAAATTTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS CCA 90 bp GGGGAAGCTGAAGTGCGAGCCCCAGCGACCGCGCAGGCGCACTCTTaGCGGAGCGACGAATCCGGCGCCGCGAGGCCACTCGCCGCTGAC +
Preference number: 5 (lower is better)
Translates to: GEAEVRAPATAQAHS*RSDESGAARPLAAD
Trigger: GTCAGCGGCGAGTGGCCTCGCGGCGCCGGATTCGTCGCTCCGCCAAGAGTGCGCCTGCGCGGTCGCTGGGGCTCGCACTTCAGCTTCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355700.9
CDS CCA 90 bp GGGACGGCCCCTTCCTTCAGCGCGGCACACGCTCCGCAAAGGGCCTaGGGCCGGCCCACGAGAACACCAGGGCACCTGCCCACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: GTAPSFSAAHAPQRA*GRPTRTPGHLPTCS
Trigger: GCTGCAAGTGGGCAGGTGCCCTGGTGTTCTCGTGGGCCGGCCCCAGGCCCTTTGCGGAGCGTGTGCCGCGCTGAAGGAAGGGGCCGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS TCA 90 bp TCTTCGACAGAGGCGCCTTGTAGAGCCCACTGGAGCCGGTGCTGGTaGACATGGTCCCGCCGGGCTCGGAGCCCCAGAGGGCGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SSTEAPCRAHWSRCW*TWSRRARSPRGRRG
Trigger: CCCCCGGCGCCCTCTGGGGCTCCGAGCCCGGCGGGACCATGTTCACCAGCACCGGCTCCAGTGGGCTCTACAAGGCGCCTCTGTCGAAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355700.9
ENST00000403766.8
CDS GCA 90 bp TGGAGGGTCGGCCCCACCACCTCCGGCAAACCCGAGGGTCCCCGCTaGCCCAGCCTCCTCAAAGAGGTGCCTAGGGTGGCGTGTAGGGGG +
Preference number: 5 (lower is better)
Translates to: WRVGPTTSGKPEGPR*PSLLKEVPRVACRG
Trigger: CCCCCTACACGCCACCCTAGGCACCTCTTTGAGGAGGCTGGGGCAGCGGGGACCCTCGGGTTTGCCGGAGGTGGTGGGGCCGACCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000457666.1
CDS GCA 90 bp CTCCGCAAAGGGCCTGGGGCCGGCCCACGAGAACACCAGGGCACCTaGCCACTTGCAGCGGCCCCAAGAGACTCCTGGGCAGAGCACCTG +
Preference number: 5 (lower is better)
Translates to: LRKGPGAGPREHQGT*PLAAAPRDSWAEHL
Trigger: CAGGTGCTCTGCCCAGGAGTCTCTTGGGGCCGCTGCAAGTGGGCAGGTGCCCTGGTGTTCTCGTGGGCCGGCCCCAGGCCCTTTGCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CAA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGTCCGGTCCCAGTGTaGGCCTGGGACTATCAGTGC +
Preference number: 5 (lower is better)
Translates to: AASQEGQAVSPATGRGRQGPVPV*AWDYQC
Trigger: GCACTGATAGTCCCAGGCCAACACTGGGACCGGACC...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCAGGGCAACAGTCTTGCGGTaGAGGGCAGGGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: EPMPGQPQSALVSPCGSRATVLR*RAGVRW
Trigger: CCACCGCACCCCTGCCCTCAACCGCAAGACTGTTGC...CCTGGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GCTGCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAATCCTGTCGCCACAGGTaGAAGACCCAAGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: AASQEGQAVSPATGRGRQSCRHR*KTQALR
Trigger: CCTCAGGGCTTGGGTCTTCAACCTGTGGCGACAGGA...TTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS CCA 90 bp TGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGTTaGCCTGGGACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACAT +
Preference number: 5 (lower is better)
Translates to: WGPRTVTRLPVRSQC*PGTISAAAGSWWRH
Trigger: ATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 90 bp ACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGTTGGCCTaGGACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACATTGAGG +
Preference number: 5 (lower is better)
Translates to: TTHCHSAAGPVPVLA*DYQCCSRKLVATLR
Trigger: CCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS-3UTR CAA 90 bp CGGGCTGATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCAACGGACCCAGAATTaGTGCCACTTGGACTCTTGG +
Preference number: 5 (lower is better)
Translates to: RADLMVGTTHCHSAAGPVQRTQN*CHLDSW
Trigger: CCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTG...GACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp TCCCTCTTCCCACAAGAACATCAGCACCAGAGATGCTCGGTCCCCGGGCTGATCGCAACAGTCTTGCGGTaGAGGGCAGGGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: SLFPQEHQHQRCSVPGLIATVLR*RAGVRW
Trigger: CCACCGCACCCCTGCCCTCAACCGCAAGACTGTTGC...GATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GCGAGCCAGGAGGGCCAGGCAGTTAGCCCTGCCACAGGGAGGGGCAGGCAAGGGGAGAACTCCAGAACCTaGAACCAGTGCATGGTTATC +
Preference number: 5 (lower is better)
Translates to: ASQEGQAVSPATGRGRQGENSRT*NQCMVI
Trigger: GATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTC...CCCTTGCCTGCCCCTCCCTGTGGCAGGGCTAACTGCCTGGCCCTCCTGGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCCAACGGACCCAGAATTaGTGCCACTTGGACTCTTGG +
Preference number: 5 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSQRTQN*CHLDSW
Trigger: CCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTG...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCCTGTCGCCACAGGTaGAAGACCCAAGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTSCRHR*KTQALR
Trigger: CCTCAGGGCTTGGGTCTTCAACCTGTGGCGACAGGA...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS CCA 90 bp GCCGGTCCAGCAGCTCCATTCTCTGCTGTCTCTGGATGTCCAGCGTaGCTCCCATCCCAATTCTGGCTTCGCTGGTGGGTTCTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AGPAAPFSAVSGCPA*LPSQFWLRWWVLKK
Trigger: CTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGAGACAGCAGAGAATGGAGCTGCTGGACCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS-3UTR CAA 90 bp GATCTGATGGTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGCAGAATTTGTGCCACTaGGACTCTTGGTATGGAGCA +
Preference number: 5 (lower is better)
Translates to: DLMVGTTHCHSAAGPVPVQNLCH*DSWYGA
Trigger: TGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTG...CACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCACCATCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATGCTGCAGCAGGAAGTaGGTGGCGACATTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTCCSRK*VATLRS
Trigger: TGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCA...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS GCA 90 bp CCACCGCTAACACGCCAGGAAAACAGCAACATCCAGCAGCACAGCTaGGCTCCCTCGCCACGACTTCCTAACTTCCCTCCACTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: PPLTRQENSNIQQHS*APSPRLPNFPPLES
Trigger: GCTTTCAAGTGGAGGGAAGTTAGGAAGTCGTGGCGAGGGAGCGCAGCTGTGCTGCTGGATGTTGCTGTTTTCCTGGCGTGTTAGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000468067.5
CDS GCA 90 bp TCGGCTGCCGGTCCGGTCCCAGTGTTGGCCTGGGACTATCAGTGCTaGAGCAGGAAGTTGGTGGCGACATTGAGGTCATTGTTTGAAGCT +
Preference number: 5 (lower is better)
Translates to: SAAGPVPVLAWDYQC*SRKLVATLRSLFEA
Trigger: AGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS GCA 90 bp CACTCGGCTGCCGGTCCGGTCCCAGTGTTGGCCTGGGACTATCAGTaGTGCAGCAGGAAGTTGGTGGCGACATTGAGGTCATTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: HSAAGPVPVLAWDYQ*CSRKLVATLRSLFE
Trigger: TTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS-3UTR CAA 90 bp GCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGTCTCTGTCGCCTCCCTaGTGCAAACTGAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: ARDRFSSSWAEPMPGQPQSLSPP*CKLREH
Trigger: ATGTTCTCTCAGTTTGCACAAGGGAGGCGACAGAGA...CTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp TGCCACAGGGAGGGGCAGGCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCGAGAACTCCAGAACCTaGAACCAGTGCATGGTTATC +
Preference number: 5 (lower is better)
Translates to: CHREGQARDRFSSSWAEPENSRT*NQCMVI
Trigger: GATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTC...GGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GCAAGGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGTCCAAGAAAAGAATTTaGCCATCCAGCTGGGGATGC +
Preference number: 5 (lower is better)
Translates to: ARDRFSSSWAEPMPGQPQSKKRI*PSSWGC
Trigger: GCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGA...CTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GGGATCGTTTCTCCTCTTCCTGGGCTGAGCCCATGCCAGGCCAGCCACAGAGTGTCCAAGAAAAGAATTTaGCCATCCAGCTGGGGATGC +
Preference number: 5 (lower is better)
Translates to: GIVSPLPGLSPCQASHRVSKKRI*PSSWGC
Trigger: GCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGA...CACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACATCAGCACCAGAGCGACATTGAGGTCATaGTTTGAAGCTCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: EGRGAVEPPSSHKNISTRATLRS*FEALRA
Trigger: AGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGC...TCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp ATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGAGGCGAGACTGGCACTAGGTACTaGCATGAGTTGGGTACTGGG +
Preference number: 5 (lower is better)
Translates to: IDTCSGVSGGNGEARRGETGTRY*HELGTG
Trigger: CCCAGTACCCAACTCATGCAAGTACCTAGTGCCAGT...CTCGCCTCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CAA 90 bp GCTGAGCCCATGCCAGGCCAGCCACAGAGTGCCCTAGTCAGCCCATGTGGCTCCCTCATCAGTGTGTGTTaGTCTAAAAACTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: AEPMPGQPQSALVSPCGSLISVC*SKNSSW
Trigger: CCAAGAAGAGTTTTTAGACAAACACACACTGATGAG...GGAGCCACATGGGCTGACTAGGGCACTCTGTGGCTGGCCTGGCATGGGCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CAA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACACAGAATTTGTGCCACTaGGACTCTTGGTATGGAGCA +
Preference number: 5 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTQNLCH*DSWYGA
Trigger: TGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTG...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTGGCTTCATGGGCTTGCAGCAACTTCGTCAGTGTaGGCTTCATGGGCTTGCAGT +
Preference number: 5 (lower is better)
Translates to: EARRCILQLRQCWLHGLAATSSV*ASWACS
Trigger: ACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGC...TGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CAA 90 bp GCTAGGATAGACACTTGTTCTGGCGTGAGTGGAGGCAATGGTGAGGCGAGGCGAAGGTACTTGCATGAGTaGGGTACTGGGTTAGGGCCT +
Preference number: 5 (lower is better)
Translates to: ARIDTCSGVSGGNGEARRRYLHE*GTGLGP
Trigger: AGGCCCTAACCCAGTACCCAACTCATGCAAGTACCT...TCGCCTCGCCTCACCATTGCCTCCACTCACGCCAGAACAAGTGTCTATCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS CCA 90 bp AGGCGAGGCGAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTaGCTTCATGGGCTTGCAGTCATTCATTGGTCTGTTCCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: RRGEARRCILQLRQC*LHGLAVIHWSVPQK
Trigger: TTTCTGAGGAACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTCGCCTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CAA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCAGGGCACCTGCCCACTaGCAGCGGCCCCAAGAGACT +
Preference number: 5 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGRAPAH*QRPQET
Trigger: AGTCTCTTGGGGCCGCTGCAAGTGGGCAGGTGCCCT...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CAA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGAAAACGGCAACAGTCTaGCGGTTGAGGGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGKTATV*RLRAGV
Trigger: CACCCCTGCCCTCAACCGCAAGACTGTTGCCGTTTT...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp GAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTGGCTTCATGGGCTTGCAGTTGGCTTCATGGGCTaGCAGTCATTCATTGGTCTG +
Preference number: 5 (lower is better)
Translates to: EARRCILQLRQCWLHGLAVGFMG*QSFIGL
Trigger: CAGACCAATGAATGACTGCAAGCCCATGAAGCCAAC...TGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS TCA 90 bp TGGCCTGGGACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACATTaGGGTCATTGTTTGAAGCTCTCAGGGCTTCCAAAGCATCACCTC +
Preference number: 5 (lower is better)
Translates to: WPGTISAAAGSWWRH*GHCLKLSGLPKHHL
Trigger: GAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 90 bp TTCTCTGCTGTCTCTGGATGTCCAGCGTGGCTCCCATCCCAATTCTaGCTTCGCTGGTGGGTTCTGAAGAAGAGAAGATGGGTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: FSAVSGCPAWLPSQF*LRWWVLKKRRWVQV
Trigger: CACTTGAACCCATCTTCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGAGACAGCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS-3UTR CAA 90 bp GTCTTGCGGTTGAGGGCAGGGGTGCGGTGGAACCTCCCTCTTCCCACAAGAACAACATCGTTGCTCATTTaGCAGAACATAACAGTTGCA +
Preference number: 5 (lower is better)
Translates to: VLRLRAGVRWNLPLPTRTTSLLI*QNITVA
Trigger: TGCAACTGTTATGTTCTGCAAAATGAGCAACGATGT...TGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACCCCTGCCCTCAACCGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS CCA 90 bp TCTGGATGTCCAGCGTGGCTCCCATCCCAATTCTGGCTTCGCTGGTaGGTTCTGAAGAAGAGAAGATGGGTTCAAGTGTCCAAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: SGCPAWLPSQFWLRW*VLKKRRWVQVSKKR
Trigger: TCTTTTCTTGGACACTTGAACCCATCTTCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 90 bp CGAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTGGCTTCATaGGCTTGCAGTCATTCATTGGTCTGTTCCTCAGAAACTTCTAGA +
Preference number: 5 (lower is better)
Translates to: RGTALHTATSSVLAS*ACSHSLVCSSETSR
Trigger: TCTAGAAGTTTCTGAGGAACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS-3UTR CAA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTGGTCCGGTCCCAGTGTaGGCCTGGGACTATCAGTGC +
Preference number: 5 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSGPVPV*AWDYQC
Trigger: GCACTGATAGTCCCAGGCCAACACTGGGACCGGACC...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp ACAGAGCCTGACACACCCGGTGCCCAGCACCAGTTAGAGAAGGCTGAATGTGAAGCTTGCAGTCATTCATaGGTCTGTTCCTCAGAAACT +
Preference number: 5 (lower is better)
Translates to: TEPDTPGAQHQLEKAECEACSHS*VCSSET
Trigger: AGTTTCTGAGGAACAGACCAATGAATGACTGCAAGC...TTCACATTCAGCCTTCTCTAACTGGTGCTGGGCACCGGGTGTGTCAGGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS TCA 90 bp TCAGTGCTGCAGCAGGAAGTTGGTGGCGACATTGAGGTCATTGTTTaGAGCTCTCAGGGCTTCCAAAGCATCACCTCTGGAAAATCCCAT +
Preference number: 5 (lower is better)
Translates to: SVLQQEVGGDIEVIV*SSQGFQSITSGKSH
Trigger: ATGGGATTTTCCAGAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS-3UTR CAA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGGTGCCACTTGGACTCTaGGTATGGAGCAGTAAAATG +
Preference number: 5 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGVPLGL*VWSSKM
Trigger: CATTTTACTGCTCCATACCAAGAGTCCAAGTGGCAC...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp AACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGCTGCTGCAGCAGGAAGTaGGTGGCGACATTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: NSCTLQESTCFGSFHAHGCCSRK*VATLRS
Trigger: TGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCA...GCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTAAAACGGCAACAGTCTaGCGGTTGAGGGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SFMENSRTLNQCMVITILKTATV*RLRAGV
Trigger: CACCCCTGCCCTCAACCGCAAGACTGTTGCCGTTTT...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp CACCATTCTTTGTTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGAAGTTGGTGGCGACATaGAGGTCATTGTTTGAAGCT +
Preference number: 5 (lower is better)
Translates to: HHSLLLDVGEGTAESSGLKLVAT*RSLFEA
Trigger: AGCTTCAAACAATGACCTCAATGTCGCCACCAACTT...CAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS TCA 90 bp TACAAACAGAGCAAACACAGGTGCCAGGCTTTATTTTATACACAGTaGGGTGGCGGCCCAAAGAATTCAGCTGACTTGCTTGATGCTCTT +
Preference number: 5 (lower is better)
Translates to: YKQSKHRCQALFYTQ*GGGPKNSADLLDAL
Trigger: AAGAGCATCAAGCAAGTCAGCTGAATTCTTTGGGCCGCCACCTCACTGTGTATAAAATAAAGCCTGGCACCTGTGTTTGCTCTGTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473194.5
CDS-3UTR CAA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGTCTCTGTCGCCTCCCTaGTGCAAACTGAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMSLSPP*CKLREH
Trigger: ATGTTCTCTCAGTTTGCACAAGGGAGGCGACAGAGA...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp TTACTAGATGTAGGAGAAGGTACTGCAGAGTCCTCTGGCCTGGAACAGCTTGGGGGTTATCACCATTCTTaGTTACTAGATGTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LLDVGEGTAESSGLEQLGGYHHS*LLDVGE
Trigger: TTCTCCTACATCTAGTAACAAAGAATGGTGATAACC...CCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS TCA 90 bp TTCCATAGGCTCCAGTATCCAAAGATAAAATGCTTCATAAAGATGTaGTGGCAAAGCTCCCCAGTTCGCTTTCATCACTGGAGTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FHRLQYPKIKCFIKM*WQSSPVRFHHWSLP
Trigger: TGGCAGACTCCAGTGATGAAAGCGAACTGGGGAGCTTTGCCATCACATCTTTATGAAGCATTTTATCTTTGGATACTGGAGCCTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460562.5
CDS GCA 90 bp CAGAGCAAACACAGGTGCCAGGAATCCAGAAGGCAAATTACTAGCTaGAGTGATGCCAAAGAAATACTGCATAGCTTCAATGAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: QSKHRCQESRRQITS*SDAKEILHSFNEEK
Trigger: TTTCTCCTCATTGAAGCTATGCAGTATTTCTTTGGCATCACTGCAGCTAGTAATTTGCCTTCTGGATTCCTGGCACCTGTGTTTGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403766.8
ENST00000468067.5
ENST00000473091.5
ENST00000494576.5
CDS-3UTR CAA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGGTGCCACTTGGACTCTaGGTATGGAGCAGTAAAATG +
Preference number: 5 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMVPLGL*VWSSKM
Trigger: CATTTTACTGCTCCATACCAAGAGTCCAAGTGGCAC...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS GCA 90 bp TATTTTATACACAGTGAGGTGGCGGCCCAAAGAATTCAGCTGACTTaGTTGATGCTCTTTCTTGTGTCTGACAATGTTCCTCCATACTCA +
Preference number: 5 (lower is better)
Translates to: YFIHSEVAAQRIQLT*LMLFLVSDNVPPYS
Trigger: TGAGTATGGAGGAACATTGTCAGACACAAGAAAGAGCATCAAGCAAGTCAGCTGAATTCTTTGGGCCGCCACCTCACTGTGTATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473194.5
CDS-3UTR CAA 90 bp AGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTAAGTTGGTGGCGACATaGAGGTCATTGTTTGAAGCT +
Preference number: 5 (lower is better)
Translates to: SFMENSRTLNQCMVITILKLVAT*RSLFEA
Trigger: AGCTTCAAACAATGACCTCAATGTCGCCACCAACTT...AAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp ATAACAGTTGCACATTGCAAGAGTCAACTTGCTTCGGGTCTTTTCATGCTCATGATTGCAAGAGTCAACTaGCTTCGGGTCTTTTCATGC +
Preference number: 5 (lower is better)
Translates to: ITVAHCKSQLASGLFMLMIARVN*LRVFSC
Trigger: GCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAAT...CATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS-3UTR CAA 90 bp AAGTTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTATTGCAAGAGTCAACTaGCTTCGGGTCTTTTCATGC +
Preference number: 5 (lower is better)
Translates to: KFHGELQNLEPVHGYHHSIARVN*LRVFSC
Trigger: GCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAAT...AGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS GCA 90 bp ATAAATCAATGTCTTGTTTGTGATGGACAACGGACCCAGAATTTGTaGCACTTGGACTCTTGGTATGGAGCAGTAAAATGGTACAAACAG +
Preference number: 5 (lower is better)
Translates to: INQCLVCDGQRTQNL*HLDSWYGAVKWYKQ
Trigger: CTGTTTGTACCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACATTGATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473091.5
ENST00000473194.5
ENST00000494576.5
CDS CCA 90 bp CTTGAAAGCACTCTCATCAGTGTGTGTTTGTCTAAAAACTCTTCTTaGAGACTGAAGAAGAAACACATCCAAGTGAAACTGAGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: LESTLISVCLSKNSS*RLKKKHIQVKLRGQ
Trigger: CTGACCTCTCAGTTTCACTTGGATGTGTTTCTTCTTCAGTCTCCAAGAAGAGTTTTTAGACAAACACACACTGATGAGAGTGCTTTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS-3UTR CAA 90 bp TTTCATGGAGAACTCCAGAACCTTGAACCAGTGCATGGTTATCACCATTCTTTGACATCGTTGCTCATTTaGCAGAACATAACAGTTGCA +
Preference number: 5 (lower is better)
Translates to: FHGELQNLEPVHGYHHSLTSLLI*QNITVA
Trigger: TGCAACTGTTATGTTCTGCAAAATGAGCAACGATGT...CAAAGAATGGTGATAACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000403766.8
CDS CCA 72 bp GAAGTGCGAGCCCCAGCGACCGCGCAGGCGCACTCTTaGCGGAGCGACGAATCCGGCGCCGCGAGGCCACTC +
Preference number: 6 (lower is better)
Translates to: EVRAPATAQAHS*RSDESGAARPL
Trigger: GAGTGGCCTCGCGGCGCCGGATTCGTCGCTCCGCCAAGAGTGCGCCTGCGCGGTCGCTGGGGCTCGCACTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355700.9
CDS GCA 72 bp GGCCCCACCACCTCCGGCAAACCCGAGGGTCCCCGCTaGCCCAGCCTCCTCAAAGAGGTGCCTAGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: GPTTSGKPEGPR*PSLLKEVPRVA
Trigger: CGCCACCCTAGGCACCTCTTTGAGGAGGCTGGGGCAGCGGGGACCCTCGGGTTTGCCGGAGGTGGTGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000457666.1
CDS GCA 72 bp GGGCCTGGGGCCGGCCCACGAGAACACCAGGGCACCTaGCCACTTGCAGCGGCCCCAAGAGACTCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GPGAGPREHQGT*PLAAAPRDSWA
Trigger: TGCCCAGGAGTCTCTTGGGGCCGCTGCAAGTGGGCAGGTGCCCTGGTGTTCTCGTGGGCCGGCCCCAGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS CCA 72 bp CCCGCTGCCCCAGCCTCCTCAAAGAGGTGCCTAGGGTaGCGTGTAGGGGGCAGCCAGGATGGCGGAGGCCGG +
Preference number: 6 (lower is better)
Translates to: PAAPASSKRCLG*RVGGSQDGGGR
Trigger: CCGGCCTCCGCCATCCTGGCTGCCCCCTACACGCCACCCTAGGCACCTCTTTGAGGAGGCTGGGGCAGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000457666.1
CDS CCA 72 bp CCTTCCTTCAGCGCGGCACACGCTCCGCAAAGGGCCTaGGGCCGGCCCACGAGAACACCAGGGCACCTGCCC +
Preference number: 6 (lower is better)
Translates to: PSFSAAHAPQRA*GRPTRTPGHLP
Trigger: GGGCAGGTGCCCTGGTGTTCTCGTGGGCCGGCCCCAGGCCCTTTGCGGAGCGTGTGCCGCGCTGAAGGAAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS TCA 72 bp GAGGCGCCTTGTAGAGCCCACTGGAGCCGGTGCTGGTaGACATGGTCCCGCCGGGCTCGGAGCCCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: EAPCRAHWSRCW*TWSRRARSPRG
Trigger: CCCTCTGGGGCTCCGAGCCCGGCGGGACCATGTTCACCAGCACCGGCTCCAGTGGGCTCTACAAGGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355700.9
ENST00000403766.8
CDS CAA 90 bp GTGGGGACCACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGTaGGCCTGGGACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACA +
Preference number: 6 (lower is better)
Translates to: VGTTHCHSAAGPVPV*AWDYQCCSRKLVAT
Trigger: TGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 72 bp TGTCACTCGGCTGCCGGTCCGGTCCCAGTGTTGGCCTaGGACTATCAGTGCTGCAGCAGGAAGTTGGTGGCG +
Preference number: 6 (lower is better)
Translates to: CHSAAGPVPVLA*DYQCCSRKLVA
Trigger: CGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 72 bp CGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGTTaGCCTGGGACTATCAGTGCTGCAGCAGGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: RTVTRLPVRSQC*PGTISAAAGSW
Trigger: CCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACAGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 72 bp ACGCACTGTCACTCGGCTGCCGGTCCGGTCCCAGTGTaGGCCTGGGACTATCAGTGCTGCAGCAGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: THCHSAAGPVPV*AWDYQCCSRKL
Trigger: CAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS GCA 72 bp GCCGGTCCGGTCCCAGTGTTGGCCTGGGACTATCAGTaGTGCAGCAGGAAGTTGGTGGCGACATTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: AGPVPVLAWDYQ*CSRKLVATLRS
Trigger: TGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS GCA 72 bp GAGAACATCAGCTGCCGGTCCAGCAGCTCCATTCTCTaGTGTCTCTGGATGTCCAGCGTGGCTCCCATCCCA +
Preference number: 6 (lower is better)
Translates to: ENISCRSSSSIL*CLWMSSVAPIP
Trigger: TGGGATGGGAGCCACGCTGGACATCCAGAGACAGCAGAGAATGGAGCTGCTGGACCGGCAGCTGATGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS GCA 72 bp GGTCCGGTCCCAGTGTTGGCCTGGGACTATCAGTGCTaGAGCAGGAAGTTGGTGGCGACATTGAGGTCATTG +
Preference number: 6 (lower is better)
Translates to: GPVPVLAWDYQC*SRKLVATLRSL
Trigger: CAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 72 bp GCAGCTCCATTCTCTGCTGTCTCTGGATGTCCAGCGTaGCTCCCATCCCAATTCTGGCTTCGCTGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: AAPFSAVSGCPA*LPSQFWLRWWV
Trigger: AACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGAGACAGCAGAGAATGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 90 bp CCGGTCCCAGTGTTGGCCTGGGACTATCAGTGCTGCAGCAGGAAGTaGGTGGCGACATTGAGGTCATTGTTTGAAGCTCTCAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PVPVLAWDYQCCSRK*VATLRSLFEALRAS
Trigger: GGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 90 bp GAGGCGAGGCGAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTaGGCTTCATGGGCTTGCAGTCATTCATTGGTCTGTTCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: EARRGTALHTATSSV*ASWACSHSLVCSSE
Trigger: TTCTGAGGAACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTCGCCTCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS CCA 72 bp CCAGCGTGGCTCCCATCCCAATTCTGGCTTCGCTGGTaGGTTCTGAAGAAGAGAAGATGGGTTCAAGTGTCC +
Preference number: 6 (lower is better)
Translates to: PAWLPSQFWLRW*VLKKRRWVQVS
Trigger: GGACACTTGAACCCATCTTCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CCA 72 bp GTCTCTGGATGTCCAGCGTGGCTCCCATCCCAATTCTaGCTTCGCTGGTGGGTTCTGAAGAAGAGAAGATGG +
Preference number: 6 (lower is better)
Translates to: VSGCPAWLPSQF*LRWWVLKKRRW
Trigger: CCATCTTCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATCCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS GCA 72 bp TGGGGATGCAGAGCACCTGATGCACCTGGAACATTTTaGTGTCGTAGCACAGACCGGACATCTGGAAGTCGT +
Preference number: 6 (lower is better)
Translates to: WGCRAPDAPGTF*CRSTDRTSGSR
Trigger: ACGACTTCCAGATGTCCGGTCTGTGCTACGACAGCAAAATGTTCCAGGTGCATCAGGTGCTCTGCATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355700.9
CDS CAA 72 bp CGAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTaGGCTTCATGGGCTTGCAGTCATTCATTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: RGTALHTATSSV*ASWACSHSLVC
Trigger: ACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS TCA 72 bp CAGAGCAAACACAGGTGCCAGGCTGGAAGTCGTTCTTaGCTGCGTGAAGGTCATACACAAAGAGCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: QSKHRCQAGSRS*LREGHTQRASG
Trigger: GCCAGAAGCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGACTTCCAGCCTGGCACCTGTGTTTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS GCA 72 bp GCAAACACAGGTGCCAGGCTGGAAGTCGTTCTTGACTaGGTGAAGGTCATACACAAAGAGCTTCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: ANTGARLEVVLD*VKVIHKELLAV
Trigger: CACTGCCAGAAGCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGACTTCCAGCCTGGCACCTGTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376440.6
CDS CCA 72 bp GAGGCACGGCGCTGCATACTGCAACTTCGTCAGTGTTaGCTTCATGGGCTTGCAGTCATTCATTGGTCTGTT +
Preference number: 6 (lower is better)
Translates to: EARRCILQLRQC*LHGLAVIHWSV
Trigger: AACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGCAGCGCCGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS CAA 72 bp GTGTTGGCCTGGGACTATCAGTGCTGCAGCAGGAAGTaGGTGGCGACATTGAGGTCATTGTTTGAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: VLAWDYQCCSRK*VATLRSLFEAL
Trigger: GAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 90 bp TTGGCCTGGGACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACATaGAGGTCATTGTTTGAAGCTCTCAGGGCTTCCAAAGCATCACCT +
Preference number: 6 (lower is better)
Translates to: LAWDYQCCSRKLVAT*RSLFEALRASKASP
Trigger: AGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTCCCAGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS TCA 72 bp CAGCAGGAAGTTGGTGGCGACATTGAGGTCATTGTTTaGAGCTCTCAGGGCTTCCAAAGCATCACCTCTGGA +
Preference number: 6 (lower is better)
Translates to: QQEVGGDIEVIV*SSQGFQSITSG
Trigger: TCCAGAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS GCA 72 bp GTAGCACAGACCGGACATCTGGAAGTCGTTCTTGACTaGGTGAAGGTCATACACAAAGAGCTTCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: VAQTGHLEVVLD*VKVIHKELLAV
Trigger: CACTGCCAGAAGCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGACTTCCAGATGTCCGGTCTGTGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355700.9
CDS CAA 72 bp TGCTGCAGCAGGAAGTTGGTGGCGACATTGAGGTCATaGTTTGAAGCTCTCAGGGCTTCCAAAGCATCACCT +
Preference number: 6 (lower is better)
Translates to: CCSRKLVATLRS*FEALRASKASP
Trigger: AGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS TCA 72 bp ACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACATTaGGGTCATTGTTTGAAGCTCTCAGGGCTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: TISAAAGSWWRH*GHCLKLSGLPK
Trigger: CTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 72 bp GACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACATaGAGGTCATTGTTTGAAGCTCTCAGGGCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: DYQCCSRKLVAT*RSLFEALRASK
Trigger: TTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 90 bp AGCACAGCTGCGCTCCCTCGCCACGACTTCCTAACTTCCCTCCACTaGAAAGCACTCTCATCAGTGTGTGTTTGTCTAAAAACTCTTCTT +
Preference number: 6 (lower is better)
Translates to: STAALPRHDFLTSLH*KALSSVCVCLKTLL
Trigger: AAGAAGAGTTTTTAGACAAACACACACTGATGAGAGTGCTTTCAAGTGGAGGGAAGTTAGGAAGTCGTGGCGAGGGAGCGCAGCTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376440.6
ENST00000468067.5
CDS CAA 90 bp GACTATCAGTGCTGCAGCAGGAAGTTGGTGGCGACATTGAGGTCATaGTTTGAAGCTCTCAGGGCTTCCAAAGCATCACCTCTGGAAAAT +
Preference number: 6 (lower is better)
Translates to: DYQCCSRKLVATLRS*FEALRASKASPLEN
Trigger: ATTTTCCAGAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTTCCTGCTGCAGCACTGATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 90 bp CTTCCTAACTTCCCTCCACTTGAAAGCACTCTCATCAGTGTGTGTTaGTCTAAAAACTCTTCTTGGAGAAGAGCCCACTGGAGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: LPNFPPLESTLISVC*SKNSSWRRAHWSRC
Trigger: GCACCGGCTCCAGTGGGCTCTTCTCCAAGAAGAGTTTTTAGACAAACACACACTGATGAGAGTGCTTTCAAGTGGAGGGAAGTTAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468067.5
CDS GCA 72 bp CACAGTGAGGTGGCGGCCCAAAGAATTCAGCTGACTTaGTTGATGCTCTTTCTTGTGTCTGACAATGTTCCT +
Preference number: 6 (lower is better)
Translates to: HSEVAAQRIQLT*LMLFLVSDNVP
Trigger: AGGAACATTGTCAGACACAAGAAAGAGCATCAAGCAAGTCAGCTGAATTCTTTGGGCCGCCACCTCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473194.5
CDS CAA 72 bp AGTGAGGTGGCGGCCCAAAGAATTCAGCTGACTTGCTaGATGCTCTTTCTTGTGTCTGACAATGTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SEVAAQRIQLTC*MLFLVSDNVPP
Trigger: TGGAGGAACATTGTCAGACACAAGAAAGAGCATCAAGCAAGTCAGCTGAATTCTTTGGGCCGCCACCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473194.5
CDS TCA 72 bp AAAGCTGGAGCCCAGCAGGGAGCAATTGACATTCGCTaGGGATTGGCAAAGAAGCTTTTCAAATGTAACCTG +
Preference number: 6 (lower is better)
Translates to: KAGAQQGAIDIR*GLAKKLFKCNL
Trigger: CAGGTTACATTTGAAAAGCTTCTTTGCCAATCCTCAGCGAATGTCAATTGCTCCCTGCTGGGCTCCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480738.1
CDS TCA 72 bp AGCAAACACAGGTGCCAGGCTTTATTTTATACACAGTaGGGTGGCGGCCCAAAGAATTCAGCTGACTTGCTT +
Preference number: 6 (lower is better)
Translates to: SKHRCQALFYTQ*GGGPKNSADLL
Trigger: AAGCAAGTCAGCTGAATTCTTTGGGCCGCCACCTCACTGTGTATAAAATAAAGCCTGGCACCTGTGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473194.5
CDS CCA 72 bp GTTCAAGTGTCCAAGAAAAGAATTTTGCCATCCAGCTaGGGATGCAGAGCACCTGATGCACCTGGAACATTT +
Preference number: 6 (lower is better)
Translates to: VQVSKKRILPSS*GCRAPDAPGTF
Trigger: AAATGTTCCAGGTGCATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGACACTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000355700.9
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473194.5
ENST00000480738.1
ENST00000494576.5
CDS CAA 72 bp GCATACTGCAACTTCGTCAGTGTTGGCTTCATGGGCTaGCAGTCATTCATTGGTCTGTTCCTCAGAAACTTC +
Preference number: 6 (lower is better)
Translates to: AYCNFVSVGFMG*QSFIGLFLRNF
Trigger: GAAGTTTCTGAGGAACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS CAA 90 bp TTTATACACAGTGAGGTGGCGGCCCAAAGAATTCAGCTGACTTGCTaGATGCTCTTTCTTGTGTCTGACAATGTTCCTCCATACTCACAG +
Preference number: 6 (lower is better)
Translates to: FIHSEVAAQRIQLTC*MLFLVSDNVPPYSQ
Trigger: CTGTGAGTATGGAGGAACATTGTCAGACACAAGAAAGAGCATCAAGCAAGTCAGCTGAATTCTTTGGGCCGCCACCTCACTGTGTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473194.5
CDS GCA 72 bp TGTCTTGTTTGTGATGGACAACGGACCCAGAATTTGTaGCACTTGGACTCTTGGTATGGAGCAGTAAAATGG +
Preference number: 6 (lower is better)
Translates to: CLVCDGQRTQNL*HLDSWYGAVKW
Trigger: CCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473091.5
ENST00000473194.5
ENST00000494576.5
CDS GCA 72 bp ACATATCAACCTCCAAATCTGGAAGTCGTTCTTGACTaGGTGAAGGTCATACACAAAGAGCTTCTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: TYQPPNLEVVLD*VKVIHKELLAV
Trigger: CACTGCCAGAAGCTCTTTGTGTATGACCTTCACGCAGTCAAGAACGACTTCCAGATTTGGAGGTTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000403766.8
ENST00000457666.1
ENST00000468067.5
ENST00000473091.5
CDS GCA 72 bp CATACTGCAACTTCGTCAGTGTTGGCTTCATGGGCTTaGAGTCATTCATTGGTCTGTTCCTCAGAAACTTCT +
Preference number: 6 (lower is better)
Translates to: HTATSSVLASWA*SHSLVCSSETS
Trigger: AGAAGTTTCTGAGGAACAGACCAATGAATGACTGCAAGCCCATGAAGCCAACACTGACGAAGTTGCAGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474510.2
CDS CAA 72 bp TTCCCTCCACTTGAAAGCACTCTCATCAGTGTGTGTTaGTCTAAAAACTCTTCTTGGAGAAGAGCCCACTGG +
Preference number: 6 (lower is better)
Translates to: FPPLESTLISVC*SKNSSWRRAHW
Trigger: CCAGTGGGCTCTTCTCCAAGAAGAGTTTTTAGACAAACACACACTGATGAGAGTGCTTTCAAGTGGAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468067.5
CDS CAA 72 bp GTTTGTGATGGACAACGGACCCAGAATTTGTGCCACTaGGACTCTTGGTATGGAGCAGTAAAATGGTACAAA +
Preference number: 6 (lower is better)
Translates to: VCDGQRTQNLCH*DSWYGAVKWYK
Trigger: TTTGTACCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473091.5
ENST00000473194.5
ENST00000494576.5
CDS CAA 72 bp CAATGTCTTGTTTGTGATGGACAACGGACCCAGAATTaGTGCCACTTGGACTCTTGGTATGGAGCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: QCLVCDGQRTQN*CHLDSWYGAVK
Trigger: TTTTACTGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473091.5
ENST00000473194.5
ENST00000494576.5
CDS CAA 90 bp TATATAAATCAATGTCTTGTTTGTGATGGACAACGGACCCAGAATTaGTGCCACTTGGACTCTTGGTATGGAGCAGTAAAATGGTACAAA +
Preference number: 6 (lower is better)
Translates to: YINQCLVCDGQRTQN*CHLDSWYGAVKWYK
Trigger: TTTGTACCATTTTACTGCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACATTGATTTATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376440.6
ENST00000403766.8
ENST00000460562.5
ENST00000468067.5
ENST00000473091.5
ENST00000473194.5
ENST00000494576.5