Pregenerated sensors for UBA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000126261Ensembl transcript IDs: ENST00000246548.9, ENST00000439527.6, ENST00000586313.1, ENST00000590048.6, ENST00000607361.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCATCTCTGAGTGATAAGAGTACCCTAACAGGCAAAGCCCTCTaGGGTCCGGGACCAGGAAGACAGTGCTACTCCACCTACTGGCGG | + |
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Preference number: 1 (lower is better) Translates to: GPSLSDKSTLTGKAL*GPGPGRQCYSTYWR Trigger: CCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCGGACCTCAGAGGGCTTTGCCTGTTAGGGTACTCTTATCACTCAGAGATGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CCA 90 bp | GCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTaGGCTGGGGATGGTACATTCAAAATGGACTTTGGTAAACTAGGG | + |
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Preference number: 1 (lower is better) Translates to: ATPPTGGLALSVGWS*AGDGTFKMDFGKLG Trigger: CCCTAGTTTACCAAAGTCCATTTTGAATGTACCATCCCCAGCCCAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CCA 90 bp | GACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTaGAGTTGGGCTGGGGATGGTACATTCAAAATGGACTTTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: DSATPPTGGLALSVG*SWAGDGTFKMDFGK Trigger: TTTACCAAAGTCCATTTTGAATGTACCATCCCCAGCCCAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CCA 90 bp | GAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCCAAGTTACTaGGCTTGGGCAAAGTCACACATTTTCTCAACAAAGGCCAACTGC | + |
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Preference number: 1 (lower is better) Translates to: EGLPFQHLKFKAPSY*AWAKSHIFSTKANC Trigger: GCAGTTGGCCTTTGTTGAGAAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGGAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR GCA 90 bp | TTCAAAATGGACTTTGGTAAACTAGGGGACAACCCAGACAAACACTaGAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: FKMDFGKLGDNPDKH*RKEEGLPFQHLKFK Trigger: CTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGTTTACCAAAGTCCATTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR GCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCCTGGAAGGCGGAGGCTaGAGTGAGCCAGGATCGCGC | + |
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Preference number: 2 (lower is better) Translates to: NTAERRKDSLSSISNSRLLEGGG*SEPGSR Trigger: GCGCGATCCTGGCTCACTGCAGCCTCCGCCTTCCAG...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR TCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGTTGGTCTTGAACTACTaGCCTCAGGTGATCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: RQCYSTYWRSGTICRLELLVLNY*PQVIHL Trigger: CAGGTGGATCACCTGAGGTCAGTAGTTCAAGACCAA...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR GCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCAGCTGGAATTACAGGTaGCTGCCACCAGGCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: QTLQKGGRTPFPASQIQGSWNYR*LPPGPA Trigger: AGCCGGGCCTGGTGGCAGGCACCTGTAATTCCAGCT...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR TCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCAGCTACAGGGGAGGCTaGGACAGGAGAATCGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: NTAERRKDSLSSISNSRLSYRGG*DRRIAC Trigger: GCAAGCGATTCTCCTGTCTCAGCCTCCCCTGTAGCT...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGACCAGGAAGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTACCAAGTTACTGGGCTTaGGCAAAGTCACACATTTTC | + |
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Preference number: 2 (lower is better) Translates to: RDQEDSATPPTGGLALSVPSYWA*AKSHIF Trigger: GAAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGG...TACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAAAGGCTCCAAGTTACTaGGCTTGGGCAAAGTCACAC | + |
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Preference number: 2 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPKAPSY*AWAKSH Trigger: GTGTGACTTTGCCCAAGCCCAGTAACTTGGAGCCTT...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR GCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCGGGTTCAAGCAATTCTaGTGCCTTAGCCTCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QTLQKGGRTPFPASQIQGGFKQF*CLSLLS Trigger: ACTCAGGAGGCTAAGGCAGCAGAATTGCTTGAACCC...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTACTCATCGCCCTGGCTaGAGTAGCAATAGCACAATC | + |
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Preference number: 2 (lower is better) Translates to: SSWNTDVHHHHTQEELYFTHRPG*SSNSTI Trigger: GATTGTGCTATTGCTACTCCAGCCAGGGCGATGAGT...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR GCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCTTCAAGCAATTCTGCTaGCTTAGCCTCCTGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: NTAERRKDSLSSISNSRLFKQFC*LSLLSS Trigger: GCTACTCAGGAGGCTAAGGCAGCAGAATTGCTTGAA...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CAA 90 bp | ACTCCCTTTCCAGCATCTCAAATTCAAGGCTCCAAGTTACTGGGCTaGGGCAAAGTCACACATTTTCTCAACAAAGGCCAACTGCTGACA | + |
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Preference number: 2 (lower is better) Translates to: TPFPASQIQGSKLLG*GKVTHFLNKGQLLT Trigger: TGTCAGCAGTTGGCCTTTGTTGAGAAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGGAGCCTTGAATTTGAGATGCTGGAAAGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGTCTTTGGCAAACAGTaGAGATCTTCTGAACCTTTT | + |
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Preference number: 2 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPVFGKQ*RSSEPF Trigger: AAAAGGTTCAGAAGATCTCCACTGTTTGCCAAAGAC...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CAA 90 bp | AAAGTACTCGTCTTTGGCAAACAGTGGAGATCTTCTGAACCTTTTTaGAGATGGAGTTTCACTCATCGCCCTGGCTGGAGTAGCAATAGC | + |
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Preference number: 2 (lower is better) Translates to: KVLVFGKQWRSSEPF*RWSFTHRPGWSSNS Trigger: GCTATTGCTACTCCAGCCAGGGCGATGAGTGAAACTCCATCTCAAAAAAGGTTCAGAAGATCTCCACTGTTTGCCAAAGACGAGTACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCGAAAGTACTCGTCTTTaGCAAACAGTGGAGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: NTAERRKDSLSSISNSRLESTRL*QTVEIF Trigger: GAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTC...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CCA 72 bp | GGTCCGGGACCAGGAAGACAGTGCTACTCCACCTACTaGCGGTCTGGCACTATCTGTAGGCTGGAGTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: GPGPGRQCYSTY*RSGTICRLELG Trigger: GCCCAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CAA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCATTACCCAGGCTGGCCTaGAACTTCTGGGCTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPLPRLA*NFWAPA Trigger: GGCTGGAGCCCAGAAGTTCAAGGCCAGCCTGGGTAA...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR TCA 72 bp | CTGAGTGATAAGAGTACCCTAACAGGCAAAGCCCTCTaGGGTCCGGGACCAGGAAGACAGTGCTACTCCACC | + |
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Preference number: 3 (lower is better) Translates to: LSDKSTLTGKAL*GPGPGRQCYST Trigger: GGTGGAGTAGCACTGTCTTCCTGGTCCCGGACCTCAGAGGGCTTTGCCTGTTAGGGTACTCTTATCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CAA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCAGACAGGAGAATCGCTaGCACCTGGAAGGCGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: NTAERRKDSLSSISNSRLRQENR*HLEGGG Trigger: GCCTCCGCCTTCCAGGTGCAAGCGATTCTCCTGTCT...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR GCA 72 bp | GACTTTGGTAAACTAGGGGACAACCCAGACAAACACTaGAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTC | + |
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Preference number: 3 (lower is better) Translates to: DFGKLGDNPDKH*RKEEGLPFQHL Trigger: GAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGTTTACCAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CAA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCATCCAAGTTACTGGGCTaGGGCAAAGTCACACATTTT | + |
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Preference number: 3 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPSKLLG*GKVTHF Trigger: AAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGGA...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CAA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAAGAAAGTACTCGTCTTaGGCAAACAGTGGAGATCTT | + |
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Preference number: 3 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPRKYSS*ANSGDL Trigger: AAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCT...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR-3UTR CAA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCATCTTCTGAACCTTTTTaGAGATGGAGTTTCACTCAT | + |
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Preference number: 3 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPSSEPF*RWSFTH Trigger: ATGAGTGAAACTCCATCTCAAAAAAGGTTCAGAAGA...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CCA 72 bp | CAGCATCTCAAATTCAAGGCTCCAAGTTACTGGGCTTaGGCAAAGTCACACATTTTCTCAACAAAGGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: QHLKFKAPSYWA*AKSHIFSTKAN Trigger: GTTGGCCTTTGTTGAGAAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGGAGCCTTGAATTTGAGATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGAGGCGGAGGCTGCAGTaGGCCAGGATCGCGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELRRRLQ*ARIAPL Trigger: CAGTGGCGCGATCCTGGCTCACTGCAGCCTCCGCCT...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | CGGGACCAGGAAGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTACTGGAAGGCGGAGGCTaGAGTGAGCCAGGATCGCGC | + |
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Preference number: 4 (lower is better) Translates to: RDQEDSATPPTGGLALSVLEGGG*SEPGSR Trigger: GCGCGATCCTGGCTCACTGCAGCCTCCGCCTTCCAG...TACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGCCCGCGACAGTGCCATaGCGGGACAACCACGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELPATVP*RDNHEP Trigger: CGGCTCGTGGTTGTCCCGCCATGGCACTGTCGCGGG...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | CGGGACCAGGAAGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAACAGGCAAAGCCCTCTaGGGTCCGGGACCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RDQEDSATPPTGGLALSVTGKAL*GPGPGR Trigger: TCTTCCTGGTCCCGGACCTCAGAGGGCTTTGCCTGT...TACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | CGGGACCAGGAAGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTTCGGCTTCCGTTaGTTCCCAGGCAGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RDQEDSATPPTGGLALSVGFGFR*FPGSFR Trigger: CCTGAAGCTGCCTGGGAACCAACGGAAGCCGAAGCC...TACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCCAGCCCCCGCGACAGTaGCATGGCGGGACAACCACG | + |
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Preference number: 4 (lower is better) Translates to: QTLQKGGRTPFPASQIQGQPPRQ*HGGTTT Trigger: CGTGGTTGTCCCGCCATGGCACTGTCGCGGGGGCTG...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTCAGCCCCCGCGACAGTaGCATGGCGGGACAACCACG | + |
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Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVQPPRQ*HGGTTT Trigger: CGTGGTTGTCCCGCCATGGCACTGTCGCGGGGGCTG...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR GCA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGGACCAGGAAGACAGTaGTACTCCACCTACTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPGPGRQ*YSTYWR Trigger: CCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCC...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTCCCGCGACAGTGCCATaGCGGGACAACCACGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVPATVP*RDNHEP Trigger: CGGCTCGTGGTTGTCCCGCCATGGCACTGTCGCGGG...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR GCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGGGGTTCAAGCAATTCTaGTGCCTTAGCCTCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELGFKQF*CLSLLS Trigger: ACTCAGGAGGCTAAGGCAGCAGAATTGCTTGAACCC...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGTGGCTTTCTGTTCTCTaGAAACTCAAGGCCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELWLSVL*KLKAHL Trigger: GAGATGGGCCTTGAGTTTTCAGAGAACAGAAAGCCA...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGTTCAAGCAATTCTGCTaGCTTAGCCTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELFKQFC*LSLLSS Trigger: GCTACTCAGGAGGCTAAGGCAGCAGAATTGCTTGAA...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCAGAATCGCTTGCACCTaGAAGGCGGAGGCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QTLQKGGRTPFPASQIQGRIACT*KAEAAV Trigger: CACTGCAGCCTCCGCCTTCCAGGTGCAAGCGATTCT...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCATGCTACTCCACCTACTaGCGGTCTGGCACTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPCYSTY*RSGTIC Trigger: ACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCA...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTGGCTTCGGCTTCCGTTaGTTCCCAGGCAGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVGFGFR*FPGSFR Trigger: CCTGAAGCTGCCTGGGAACCAACGGAAGCCGAAGCC...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR TCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGAGTCTCGATGCTCTTTaGAAAAAGACGTGCATAGCT | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELSLDAL*KKTCIA Trigger: AGCTATGCACGTCTTTTTTCAAAGAGCATCGAGACT...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGTCTTCCCCAAACAACTaGTTGAACAAGTACTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELSSPNN*LNKYFA Trigger: GGCAAAGTACTTGTTCAACCAGTTGTTTGGGGAAGA...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCAGCCTCCTGAGTAGCTaGAACACAGATGTGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: NTAERRKDSLSSISNSRLSLLSS*NTDVHH Trigger: GTGGTGCACATCTGTGTTCCAGCTACTCAGGAGGCT...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCACCAAGTTACTGGGCTTaGGCAAAGTCACACATTTTC | + |
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Preference number: 4 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPPSYWA*AKSHIF Trigger: GAAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGG...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCAAGGCTCCAAGTTACTaGGCTTGGGCAAAGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NTAERRKDSLSSISNSRLKAPSY*AWAKSH Trigger: GTGTGACTTTGCCCAAGCCCAGTAACTTGGAGCCTT...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGTCCCTGCCATTGATTTaGTATCAAATCTACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RQCYSTYWRSGTICRLELSLPLI*YQIYSS Trigger: TGAAGAGTAGATTTGATATCAAATCAATGGCAGGGA...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTAACCCAGACAAACACTaGAGAAAGGAGGAAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWNTDVHHHHTQEELYFNPDKH*RKEEGL Trigger: GAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTT...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTGCAGTACACTTTCCTTaGCAACCTGTGCCTTTGATC | + |
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Preference number: 4 (lower is better) Translates to: SSWNTDVHHHHTQEELYFAVHFP*QPVPLI Trigger: GATCAAAGGCACAGGTTGCCAAGGAAAGTGTACTGC...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCAGGCTGGAGTTGGGCTaGGGATGGTACATTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NTAERRKDSLSSISNSRLRLELG*GWYIQN Trigger: ATTTTGAATGTACCATCCCCAGCCCAACTCCAGCCT...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTATAGTCAGGGTTCATaGTGCTGTCATGGTAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTLQKGGRTPFPASQIQGYSQGS*CCHGRQ Trigger: TTGCCTACCATGACAGCATCATGAACCCTGACTATA...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTCAGTCACCTCTGGCTTaGTGGCACATACATAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSWNTDVHHHHTQEELYFQSPLA*WHIHNN Trigger: ATTGTTATGTATGTGCCAGCAAGCCAGAGGTGACTG...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTTCACCTCTGGCTTGCTaGCACATACATAACAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSWNTDVHHHHTQEELYFSPLAC*HIHNNW Trigger: CCAATTGTTATGTATGTGCCAGCAAGCCAGAGGTGA...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTGAGTTGGGCTGGGGATaGTACATTCAAAATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSWNTDVHHHHTQEELYFELGWG*YIQNGL Trigger: AAGTCCATTTTGAATGTACCATCCCCAGCCCAACTC...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CAA 72 bp | GTCTTTGGCAAACAGTGGAGATCTTCTGAACCTTTTTaGAGATGGAGTTTCACTCATCGCCCTGGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFGKQWRSSEPF*RWSFTHRPGWS Trigger: ACTCCAGCCAGGGCGATGAGTGAAACTCCATCTCAAAAAAGGTTCAGAAGATCTCCACTGTTTGCCAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR GCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCAAGAGGAACATCAGCTaGCAGGCACATTCTATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTLQKGGRTPFPASQIQGKRNIS*QAHSIN Trigger: GTTAATAGAATGTGCCTGGCAGCTGATGTTCCTCTT...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCGAAAGTACTCGTCTTTaGCAAACAGTGGAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLQKGGRTPFPASQIQGESTRL*QTVEIF Trigger: GAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTC...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| 3UTR CAA 72 bp | CCAGCATCTCAAATTCAAGGCTCCAAGTTACTGGGCTaGGGCAAAGTCACACATTTTCTCAACAAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PASQIQGSKLLG*GKVTHFLNKGQ Trigger: TTGGCCTTTGTTGAGAAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGGAGCCTTGAATTTGAGATGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTTCACCTCTGGCTTGCTaGCACATACATAACAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVSPLAC*HIHNNW Trigger: CCAATTGTTATGTATGTGCCAGCAAGCCAGAGGTGA...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTCACATTCTATTAACATaGTTTCGGGCAGCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVHILLT*FRAAGR Trigger: TCGACCTGCTGCCCGAAACCATGTTAATAGAATGTG...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR TCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTAGTCTCGATGCTCTTTaGAAAAAGACGTGCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVSLDAL*KKTCIA Trigger: AGCTATGCACGTCTTTTTTCAAAGAGCATCGAGACT...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR GCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTAAGAGGAACATCAGCTaGCAGGCACATTCTATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVKRNIS*QAHSIN Trigger: GTTAATAGAATGTGCCTGGCAGCTGATGTTCCTCTT...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTTCTTCCCCAAACAACTaGTTGAACAAGTACTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVSSPNN*LNKYFA Trigger: GGCAAAGTACTTGTTCAACCAGTTGTTTGGGGAAGA...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CCA 90 bp | AGAATAAAGAAAAGAAAGTACTCGTCTTTGGCAAACAGTGGAGATCTTCTGAACTCTGTAGGCTGGAGTTaGGCTGGGGATGGTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RIKKRKYSSLANSGDLLNSVGWS*AGDGTF Trigger: GAATGTACCATCCCCAGCCCAACTCCAGCCTACAGA...GTTCAGAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCTTTTCTTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | AGAATAAAGAAAAGAAAGTACTCGTCTTTGGCAAACAGTGGAGATCTTCTGAACTTGGTCTTGAACTACTaGCCTCAGGTGATCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIKKRKYSSLANSGDLLNLVLNY*PQVIHL Trigger: CAGGTGGATCACCTGAGGTCAGTAGTTCAAGACCAA...GTTCAGAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCTTTTCTTTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CCA 90 bp | AGAATAAAGAAAAGAAAGTACTCGTCTTTGGCAAACAGTGGAGATCTTCTGAACACTCATCGCCCTGGCTaGAGTAGCAATAGCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: RIKKRKYSSLANSGDLLNTHRPG*SSNSTI Trigger: GATTGTGCTATTGCTACTCCAGCCAGGGCGATGAGT...GTTCAGAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCTTTTCTTTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR TCA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTTCCCTGCCATTGATTTaGTATCAAATCTACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRRYFLISIFFPKQLVSLPLI*YQIYSS Trigger: TGAAGAGTAGATTTGATATCAAATCAATGGCAGGGA...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CCA 90 bp | AGAATAAAGAAAAGAAAGTACTCGTCTTTGGCAAACAGTGGAGATCTTCTGAACGTCTTTGGCAAACAGTaGAGATCTTCTGAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIKKRKYSSLANSGDLLNVFGKQ*RSSEPF Trigger: AAAAGGTTCAGAAGATCTCCACTGTTTGCCAAAGAC...GTTCAGAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCTTTTCTTTATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS CCA 90 bp | CCACCGCCTCAGCCAGCTCCCGGGGCAGCCCCCGCGACAGTGCCATaGCGGGACAACCACGAGCCGCGGCGGAGGCGGAGGCGGGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PPPQPAPGAAPATVP*RDNHEPRRRRRREN Trigger: GTTCTCCCGCCTCCGCCTCCGCCGCGGCTCGTGGTTGTCCCGCCATGGCACTGTCGCGGGGGCTGCCCCGGGAGCTGGCTGAGGCGGTGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000246548.9 ENST00000586313.1 ENST00000590048.6 ENST00000607361.5 |
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| CDS GCA 90 bp | AAACCCGCTCGTGACCAGCGCTCGGGACGCGTTGGTCGCTATCATTaGCATCCTCCGCCCCGCGTCGTTACTTCGGAGTTACGACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPARDQRSGRVGRYH*HPPPRVVTSELRQG Trigger: TCCCTGTCGTAACTCCGAAGTAACGACGCGGGGCGGAGGATGGCAATGATAGCGACCAACGCGTCCCGAGCGCTGGTCACGAGCGGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS TCA 90 bp | GCAATGACAGTCACGCAGCCTGCGGGAGCCCTGCCACTCGCTCCGTaGCCCAGGGTAAGTTACTCAACCCCATTGCGTCTCCCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AMTVTQPAGALPLAP*PRVSYSTPLRLPFL Trigger: GAGGAAAGGGAGACGCAATGGGGTTGAGTAACTTACCCTGGGTCACGGAGCGAGTGGCAGGGCTCCCGCAGGCTGCGTGACTGTCATTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS-3UTR CAA 90 bp | CGGGACCAGGAAGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAAGACAGGAGAATCGCTaGCACCTGGAAGGCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RDQEDSATPPTGGLALSVRQENR*HLEGGG Trigger: GCCTCCGCCTTCCAGGTGCAAGCGATTCTCCTGTCT...TACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCTTCCTGGTCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS GCA 90 bp | TCCAGATCAATCGTCTACTGTGAGAGCAATGACAGTCACGCAGCCTaGGGGAGCCCTGCCACTCGCTCCGTGACCCAGGGTAAGTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSIVYCESNDSHAA*GSPATRSVTQGKLL Trigger: GAGTAACTTACCCTGGGTCACGGAGCGAGTGGCAGGGCTCCCGCAGGCTGCGTGACTGTCATTGCTCTCACAGTAGACGATTGATCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS-3UTR CAA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGTGAGCACGAGATTCTaGAGGAGCTCGCAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPVSTRF*RSSQPM Trigger: CATCGGCTGCGAGCTCCTCAAGAATCTCGTGCTCAC...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCTGGCTTCGGCTTCCGTaGGTTCCCAGGCAGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NTAERRKDSLSSISNSRLWLRLP*VPRQLQ Trigger: CTGAAGCTGCCTGGGAACCAACGGAAGCCGAAGCCA...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | AGTAGCTGGAACACAGATGTGCACCACCACCACACGCAGGAAGAGCTTTATTTTTTACCCAGGCTGGCCTaGAACTTCTGGGCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSWNTDVHHHHTQEELYFLPRLA*NFWAPA Trigger: GGCTGGAGCCCAGAAGTTCAAGGCCAGCCTGGGTAA...AAAATAAAGCTCTTCCTGCGTGTGGTGGTGGTGCACATCTGTGTTCCAGCTACT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTGTGAGCACGAGATTCTaGAGGAGCTCGCAGCCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSVRRYFLISIFFPKQLVVSTRF*RSSQPM Trigger: CATCGGCTGCGAGCTCCTCAAGAATCTCGTGCTCAC...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CAA 90 bp | AGACAGTGCTACTCCACCTACTGGCGGTCTGGCACTATCTGTAGGCTGGAGTTGAGAAAGTACTCGTCTTaGGCAAACAGTGGAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQCYSTYWRSGTICRLELRKYSS*ANSGDL Trigger: AAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCT...CAACTCCAGCCTACAGATAGTGCCAGACCGCCAGTAGGTGGAGTAGCACTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | ACTAGGGGACAACCCAGACAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCATCCCCAAACAACTGGTaGAACAAGTACTTTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRGQPRQTLQKGGRTPFPSPNNW*NKYFAQ Trigger: TTGGGCAAAGTACTTGTTCAACCAGTTGTTTGGGGA...TGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTGTCTGGGTTGTCCCCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | AACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCTCCAAGTTACTGGGCTaGGGCAAAGTCACACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTAERRKDSLSSISNSRLSKLLG*GKVTHF Trigger: AAAATGTGTGACTTTGCCCAAGCCCAGTAACTTGGA...GAGCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTTCCCCAAACAACTGGTaGAACAAGTACTTTGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSVRRYFLISIFFPKQLVSPNNW*NKYFAQ Trigger: TTGGGCAAAGTACTTGTTCAACCAGTTGTTTGGGGA...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CAA 90 bp | CAAACACTGCAGAAAGGAGGAAGGACTCCCTTTCCAGCATCTCAAATTCAAGGCTCTTCTGAACCTTTTTaGAGATGGAGTTTCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTLQKGGRTPFPASQIQGSSEPF*RWSFTH Trigger: ATGAGTGAAACTCCATCTCAAAAAAGGTTCAGAAGA...GCCTTGAATTTGAGATGCTGGAAAGGGAGTCCTTCCTCCTTTCTGCAGTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS-3UTR CAA 90 bp | AGCTCTGTCAGGAGATACTTCTTGATCAGCATCTTCTTCCCCAAACAACTGGTTTTCCCTGCCATTGATTaGATATCAAATCTACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVRRYFLISIFFPKQLVFPAID*ISNLLF Trigger: GAAGAGTAGATTTGATATCAAATCAATGGCAGGGAA...AACCAGTTGTTTGGGGAAGAAGATGCTGATCAAGAAGTATCTCCTGACAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586313.1 |
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| CDS-3UTR CAA 90 bp | AGAATAAAGAAAAGAAAGTACTCGTCTTTGGCAAACAGTGGAGATCTTCTGAACTTCCCTGCCATTGATTaGATATCAAATCTACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIKKRKYSSLANSGDLLNFPAID*ISNLLF Trigger: GAAGAGTAGATTTGATATCAAATCAATGGCAGGGAA...GTTCAGAAGATCTCCACTGTTTGCCAAAGACGAGTACTTTCTTTTCTTTATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246548.9 |
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| CDS CCA 72 bp | CAGCCAGCTCCCGGGGCAGCCCCCGCGACAGTGCCATaGCGGGACAACCACGAGCCGCGGCGGAGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPAPGAAPATVP*RDNHEPRRRRR Trigger: CCTCCGCCTCCGCCGCGGCTCGTGGTTGTCCCGCCATGGCACTGTCGCGGGGGCTGCCCCGGGAGCTGGCTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000246548.9 ENST00000586313.1 ENST00000590048.6 ENST00000607361.5 |
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| CDS CAA 72 bp | TGTGTAAACCCGCTCGTGACCAGCGCTCGGGACGCGTaGGTCGCTATCATTGCCATCCTCCGCCCCGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: CVNPLVTSARDA*VAIIAILRPAS Trigger: CGACGCGGGGCGGAGGATGGCAATGATAGCGACCAACGCGTCCCGAGCGCTGGTCACGAGCGGGTTTACACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS CAA 90 bp | CGCGTTCCGTGTGTAAACCCGCTCGTGACCAGCGCTCGGGACGCGTaGGTCGCTATCATTGCCATCCTCCGCCCCGCGTCGTTACTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RVPCVNPLVTSARDA*VAIIAILRPASLLR Trigger: CCGAAGTAACGACGCGGGGCGGAGGATGGCAATGATAGCGACCAACGCGTCCCGAGCGCTGGTCACGAGCGGGTTTACACACGGAACGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS TCA 72 bp | GTCACGCAGCCTGCGGGAGCCCTGCCACTCGCTCCGTaGCCCAGGGTAAGTTACTCAACCCCATTGCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VTQPAGALPLAP*PRVSYSTPLRL Trigger: GAGACGCAATGGGGTTGAGTAACTTACCCTGGGTCACGGAGCGAGTGGCAGGGCTCCCGCAGGCTGCGTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS GCA 72 bp | CGTGACCAGCGCTCGGGACGCGTTGGTCGCTATCATTaGCATCCTCCGCCCCGCGTCGTTACTTCGGAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RDQRSGRVGRYH*HPPPRVVTSEL Trigger: TAACTCCGAAGTAACGACGCGGGGCGGAGGATGGCAATGATAGCGACCAACGCGTCCCGAGCGCTGGTCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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| CDS GCA 72 bp | ATCGTCTACTGTGAGAGCAATGACAGTCACGCAGCCTaGGGGAGCCCTGCCACTCGCTCCGTGACCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IVYCESNDSHAA*GSPATRSVTQG Trigger: ACCCTGGGTCACGGAGCGAGTGGCAGGGCTCCCGCAGGCTGCGTGACTGTCATTGCTCTCACAGTAGACGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439527.6 |
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