RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UBA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000130985

Ensembl transcript IDs: ENST00000335972.11, ENST00000377269.3, ENST00000377351.8, ENST00000412206.5, ENST00000427561.5, ENST00000442035.5, ENST00000451702.2, ENST00000457753.5, ENST00000490869.1

Found 485 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCTGCCAGAAGCCAAATaGGAACCCTGGGCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRLPEAK*EPWAGR
Trigger: CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
3UTR-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAGGGAACACCAGACTTaGCTAGTTGGGCCACTGCCA +
Preference number: 2 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRREHQT*LVGPLP
Trigger: TGGCAGTGGCCCAACTAGCCAAGTCTGGTGTTCCCT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
3UTR-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACTGCCAGAAGCCAAATaGGAACCCTGGGCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSLPEAK*EPWAGR
Trigger: CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
3UTR-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGAGGGAACACCAGACTaGGCTAGTTGGGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGREGTPD*ASWATA
Trigger: GGCAGTGGCCCAACTAGCCAAGTCTGGTGTTCCCTC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGGCGGAGGCTGCAGTaGGCCGAGACTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCRRRLQ*AETAPL
Trigger: CAGTGGCGCAGTCTCGGCTCACTGCAGCCTCCGCCT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCTGCATCCTCCTCATTaGGGGGCCGAGGTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLHPPH*GAEVAG
Trigger: GCCGGCCACCTCGGCCCCGCAATGAGGAGGATGCAG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTACCAGCGCCCGCACGTaGCGGCCCAGCTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCTSART*RPSFRF
Trigger: GAAGCGAAAGCTGGGCCGCCACGTGCGGGCGCTGGT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCGGAGCAGGCCTTCATaGCTTCCTGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCRSRPS*LPGQPG
Trigger: GCCTGGCTGCCCAGGAAGTCATGAAGGCCTGCTCCG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGCATCCTCCTCATTaGGGGGCCGAGGTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLHPPH*GAEVAG
Trigger: GCCGGCCACCTCGGCCCCGCAATGAGGAGGATGCAG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGGGAGGCGGAGGCTaGAGTGAGCCGAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLGGGG*SEPRLR
Trigger: GCGCAGTCTCGGCTCACTGCAGCCTCCGCCTCCCAG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGGACATCCCCTGTaGCGGGCGGAAGCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKAGHPL*RAEASP
Trigger: AGGCGAGGCTTCCGCCCGGCACAGGGGATGTCCAGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGGGTGTGCCAGTGGTaGCAGGCCCAGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCWVCQW*QAQVTQ
Trigger: CTGCGTGACCTGGGCCTGCCACCACTGGCACACCCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGACCAGCGCCCGCACGTaGCGGCCCAGCTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKTSART*RPSFRF
Trigger: GAAGCGAAAGCTGGGCCGCCACGTGCGGGCGCTGGT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCAGGCCCCGCAGGCCTaGTACCAGGACACTGGATGT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCQAPQA*YQDTGC
Trigger: ACATCCAGTGTCCTGGTATCAGGCCTGCGGGGCCTG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGCGAGGCGGGGCTGTaGTACCTCGGCCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSEAGL*YLGPVF
Trigger: AAAAACCGGGCCGAGGTATCACAGCCCCGCCTCGCT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGTGGCCGGCCATGCTaGGCACAGAACTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKGGRPC*AQNWCR
Trigger: CCTGCACCAGTTCTGTGCTCAGCATGGCCGGCCACC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCGGAGCAGGCCTTCATaGCTTCCTGGGCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKRSRPS*LPGQPG
Trigger: GCCTGGCTGCCCAGGAAGTCATGAAGGCCTGCTCCG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGCACCTCCAAGGGCTaGGTGCCTGCCAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSTSKG*VPASRS
Trigger: ACTGCGGCTGGCAGGCACTCAGCCCTTGGAGGTGCT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAGCACCTCCAAGGGCTaGGTGCCTGCCAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKSTSKG*VPASRS
Trigger: ACTGCGGCTGGCAGGCACTCAGCCCTTGGAGGTGCT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCGCCAGACTTGGGGGTaGATTCGGGGACCTGCACAG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCRQTWG*IRGPAQ
Trigger: CTGTGCAGGTCCCCGAATTCACCCCCAAGTCTGGCG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCAGGCCCCGCGTGTCTaGCACCACCAGCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRQAPRV*HHQLDA
Trigger: GGCATCAAGCTGGTGGTGGCAGACACGCGGGGCCTG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCTCCCCCGGCCGTTGTaGTTGTGGTTGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLPRPL*LWLSLP
Trigger: TGGCAGGGACAACCACAACCACAACGGCCGGGGGAG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCAGCTCACAGCCAATaGCCCCCGCACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKAAHSQ*PPHPPG
Trigger: TCCTGGTGGGTGCGGGGGCCATTGGCTGTGAGCTGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGTCAGCCCAGGTCTGTaGTCGCTGCAGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCVSPGL*SLQHQA
Trigger: AGCCTGGTGCTGCAGCGACCACAGACCTGGGCTGAC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGGGTGTGCCAGTGGTaGCAGGCCCAGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKWVCQW*QAQVTQ
Trigger: CTGCGTGACCTGGGCCTGCCACCACTGGCACACCCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCAGGCCCCGCAGGCCTaGTACCAGGACACTGGATGT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRQAPQA*YQDTGC
Trigger: ACATCCAGTGTCCTGGTATCAGGCCTGCGGGGCCTG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCAGGCACATAGCTGTTaGGCTCAGCGAGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKQAHSC*AQRGGA
Trigger: AGCCCCGCCTCGCTGAGCTCAACAGCTATGTGCCTG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCCAGAACGGCGCTCCTaGGCTTGTGAGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKPERRS*ACELVR
Trigger: CCTGACCAGCTCACAAGCTCAGGAGCGCCGTTCTGG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCGCCAGACTTGGGGGTaGATTCGGGGACCTGCACAG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRRQTWG*IRGPAQ
Trigger: CTGTGCAGGTCCCCGAATTCACCCCCAAGTCTGGCG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCAAGGGCTGAGTGCCTaGCAGCCGCAGTGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRQGLSA*QPQCSL
Trigger: GAGCGAACACTGCGGCTGGCAGGCACTCAGCCCTTG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCAGCCCAGGTCTGTaGTCGCTGCAGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKVSPGL*SLQHQA
Trigger: AGCCTGGTGCTGCAGCGACCACAGACCTGGGCTGAC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTACTGGGTGTGCCAGTaGTGGCAGGCCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKYWVCQ*WQAQVT
Trigger: CGTGACCTGGGCCTGCCACCACTGGCACACCCAGTA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTACTGGGTGTGCCAGTaGTGGCAGGCCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRYWVCQ*WQAQVT
Trigger: CGTGACCTGGGCCTGCCACCACTGGCACACCCAGTA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGTGTGGACAGCGTTTaGGCCCAGACCAGAACGGCG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKGVDSV*AQTRTA
Trigger: CGCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGGCTCACAGCAGCCTTaGCCTCCCAGGTTGAAACGA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCGSQQP*PPRLKR
Trigger: TCGTTTCAACCTGGGAGGTCAAGGCTGCTGTGAGCC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCTGGAAGCCAATGTaGAGCTGGGCAGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKAWKPM*SWAGRE
Trigger: TTCTCGCCCTGCCCAGCTGCACATTGGCTTCCAGGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCCCAGCAGCCACATATaGCAGCTTCCGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCPSSHI*QLPDEV
Trigger: GACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTTCGAGTACTGGGTGTaGCAGTGGTGGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRFEYWV*QWWQAQ
Trigger: CTGGGCCTGCCACCACTGGCACACCCAGTACTCGAA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAAGGCCAACCACGGCTaGTGTGGTCGTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKKANHG*CGRGNG
Trigger: GCCATTGCCACGACCACAGCAGCCGTGGTTGGCCTT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGCTGTCGGTGCCCCTaGACAACCTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSCRCP*TTLYSS
Trigger: GGAGCTGTACAAGGTTGTGCAGGGGCACCGACAGCT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCGAGACTGCGCCACTaGACTCCAACCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRPRLRH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAGTGGCGCAGTCTCGG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTTAGAACCCGGCTTTaGATCAGGCCCGGACACGCG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKVRTRL*IRPGHA
Trigger: CGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAAC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCACTGGGCAGTGCCCTaGTCATGTAGGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCHWAVP*SCRVTA
Trigger: GGCTGTTACCCTACATGACCAGGGCACTGCCCAGTG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGCCTTCATGACTTCCTaGGCAGCCAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRAFMTS*AARPPM
Trigger: CATTGGGGGCCTGGCTGCCCAGGAAGTCATGAAGGC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCTTCATGACTTCCTaGGCAGCCAGGCCCCCAATG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKAFMTS*AARPPM
Trigger: CATTGGGGGCCTGGCTGCCCAGGAAGTCATGAAGGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGGCGCACAGCTACTCTaGAAGTGGGGAAGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCGAQLL*KWGSPL
Trigger: TAGAGGGCTTCCCCACTTCCAGAGTAGCTGTGCGCC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGCCACCACCAGCTTaGTGCCACGGTTGTGACAGA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLPPPA*CHGCDR
Trigger: TCTGTCACAACCGTGGCATCAAGCTGGTGGTGGCAG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTGCCACCACCAGCTTaGTGCCACGGTTGTGACAGA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLPPPA*CHGCDR
Trigger: TCTGTCACAACCGTGGCATCAAGCTGGTGGTGGCAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTATGCCAGCTTCCGGATaGGGTCCTCGTCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCMPASG*GPRPGY
Trigger: ATAACCTGGACGAGGACCTCATCCGGAAGCTGGCAT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGGCACTTGTCCTCTGTaGGGACCTCTTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCGTCPL*GPLCPQ
Trigger: CTGAGGACAAAGAGGTCCTCACAGAGGACAAGTGCC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGCCAAAGATGAGCTaGAGCCACGGGGCAACGGAA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLPKMS*SHGATE
Trigger: TTCCGTTGCCCCGTGGCTTCAGCTCATCTTTGGCAG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTTGTGGTTGTCCCTaGCACCTCCTTACAGCCGAG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRGCGCP*HLLTAE
Trigger: CTCGGCTGTAAGGAGGTGGCAGGGACAACCACAACC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGCTACCAGTTCTGCTaGATCCTCCTCATTGCGGGG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRGYQFC*ILLIAG
Trigger: CCCCGCAATGAGGAGGATGCAGCAGAACTGGTAGCC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCCCAGCAGCCACATATaGCAGCTTCCGGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKPSSHI*QLPDEV
Trigger: GACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGCACATTGCCTTTGGTaGCCAGTGTGCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCAHCLW*PVCLTP
Trigger: TGGAGTCAGGCACACTGGGCACCAAAGGCAATGTGC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGCCCACTGCAGGGTGTaGTCGATGGCATTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRAHCRV*SMALGK
Trigger: CTTCCCTAATGCCATCGAGCACACCCTGCAGTGGGC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGGACCTGCACAGACTaGAGGAATGTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRGTCTD*RNVATA
Trigger: TGCTGTGGCCACATTCCTGCAGTCTGTGCAGGTCCC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAGCTGTCGGTGCCCCTaGACAACCTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKSCRCP*TTLYSS
Trigger: GGAGCTGTACAAGGTTGTGCAGGGGCACCGACAGCT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGCTGTCGGTGCCCCTaGACAACCTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSCRCP*TTLYSS
Trigger: GGAGCTGTACAAGGTTGTGCAGGGGCACCGACAGCT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGAGTCAAGCTGTCGGTaGCCCTGCACAACCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCESSCR*PCTTLY
Trigger: GTACAAGGTTGTGCAGGGGCACCGACAGCTTGACTC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGTACTGGTGACGTGGTaGGGCAAGGGGTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCVLVTW*GKGFRE
Trigger: TTCTCTGAACCCCTTGCCGCACCACGTCACCAGTAC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGACACGCGACGTTTCTTaGACAGCGGCGAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRTRDVS*TAASWT
Trigger: TGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTCGGACAACACGGACTaGGCAGGGGAGCAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSDNTD*AGEQLE
Trigger: TTCTAACTGCTCCCCTGCCCAGTCCGTGTTGTCCGA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCCCACACGGTTCTGGTaGCTTGTCACCCGGATATGT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCPTRFW*LVTRIC
Trigger: ACATATCCGGGTGACAAGCCACCAGAACCGTGTGGG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCCTGCACATTGCCTTTaGTGCCCAGTGTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCPAHCL*CPVCLT
Trigger: AGTCAGGCACACTGGGCACCAAAGGCAATGTGCAGG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCAGGTGGGTCCTGGCTaGAACTGTACGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCQVGPG*NCTTLS
Trigger: TGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAAAGGTGAGCGGGTGTaGACAGCGTTTGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRKGERV*TAFGPR
Trigger: TCTGGGCCCAAACGCTGTCCACACCCGCTCACCTTT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAAAGGTGAGCGGGTGTaGACAGCGTTTGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKKGERV*TAFGPR
Trigger: TCTGGGCCCAAACGCTGTCCACACCCGCTCACCTTT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGCCAGAAGCCAAATaGGAACCCTGGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLPEAK*EPWAGR
Trigger: CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCAGCTACTCTGGAAGTaGGGAAGCCCTCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCQLLWK*GSPLAF
Trigger: GAAGGCTAGAGGGCTTCCCCACTTCCAGAGTAGCTG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTTGATGCCACGGTTGTaGCAGAACTCACCCACTCGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLMPRL*QNSPTR
Trigger: GCGAGTGGGTGAGTTCTGTCACAACCGTGGCATCAA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTTAGGTACTTTGACCTaGCTGACGATGCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLGTLT*LTMPPR
Trigger: CCGTGGAGGCATCGTCAGTCAGGTCAAAGTACCTAA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGGGCAGAGTGGCTTTaGGCTCCTCTAGACGACTGT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKWAEWL*APLDDC
Trigger: ACAGTCGTCTAGAGGAGCTCAAAGCCACTCTGCCCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGCTTGGCAGCTGGCATaGAGAAGGAATAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCAWQLA*RRNRAW
Trigger: CCATGCTCTATTCCTTCTTCATGCCAGCTGCCAAGC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCCTCGTCTATGTCTaGTTCACTGCCGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKALVYV*FTAVLG
Trigger: GCCAAGAACGGCAGTGAAGCAGACATAGACGAGGGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCTGGAGCCGCTTCATTaGCTCATGGCCCAACACATA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLEPLH*LMAQHI
Trigger: TATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCATTTGGCGCACAGCTaGAGCAGCCGTGTCAGACTT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRHLAHS*SSRVRL
Trigger: AAGTCTGACACGGCTGCTGCAGCTGTGCGCCAAATG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCACCACCTGCACATTaGCTTTGGTGCCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSPPAH*LWCPVC
Trigger: GCACACTGGGCACCAAAGGCAATGTGCAGGTGGTGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCAGGAGGGAAGTTGTaGAGCAGCTGCCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSGGKL*SSCRML
Trigger: CAACATCCGGCAGCTGCTGCACAACTTCCCTCCTGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGAGGCATTGGCGCTCTaGAGCTCCTGGTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGREALAL*SSWSET
Trigger: TGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGCCCGGAGGTTGGATaGAGCCACGATGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCCPEVG*SHDEIH
Trigger: ATGGATTTCATCGTGGCTGCATCCAACCTCCGGGCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGTCAAGCTGTCGGTaGCCCTGCACAACCTTGTAC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKESSCR*PCTTLY
Trigger: GTACAAGGTTGTGCAGGGGCACCGACAGCTTGACTC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGTACTGGTGACGTGGTaGGGCAAGGGGTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRVLVTW*GKGFRE
Trigger: TTCTCTGAACCCCTTGCCGCACCACGTCACCAGTAC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCGGACAACACGGACTaGGCAGGGGAGCAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSDNTD*AGEQLE
Trigger: TTCTAACTGCTCCCCTGCCCAGTCCGTGTTGTCCGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCTTGGCCATTCCGTTaGTTGGCACCGAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKSWPFR*LAPRAL
Trigger: AAGTGCCCTCGGTGCCAACCAACGGAATGGCCAAGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCTGATACCAGGACACTaGATGTCTGGAGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLIPGH*MSGAAS
Trigger: TGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCAGGGCGAGAAAACTTaGCGAAGTCCGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCQGEKT*RSPSPQ
Trigger: TTGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCTGCACATTGCCTTTaGTGCCCAGTGTGCCTGACT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRPAHCL*CPVCLT
Trigger: AGTCAGGCACACTGGGCACCAAAGGCAATGTGCAGG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGATGGACTTCTCAGGTaGGTCCTGGCTGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCDGLLR*VLAGTV
Trigger: TACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGGTACAGATGGGGATaGACTTCTCAGGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRGYRWG*TSQVGP
Trigger: AGGACCCACCTGAGAAGTCCATCCCCATCTGTACCC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCCTGAGCTTGTGAGCTaGTCAGGAGGGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKPELVS*SGGKLC
Trigger: GCACAACTTCCCTCCTGACCAGCTCACAAGCTCAGG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGCGCTCTGCAGCTCCTaGTCAGAAACATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCALCSS*SETWIL
Trigger: CAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGGTCGTGGCAATGGCTaGGATGATCTTCCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCGRGNG*DDLPCN
Trigger: ATTGCAGGGAAGATCATCCCAGCCATTGCCACGACC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTATAGTACTGGTGACGTaGTGCGGCAAGGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCIVLVT*CGKGFR
Trigger: TCTGAACCCCTTGCCGCACCACGTCACCAGTACTAT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGCATGGACACGCCCTaGGACAGCATGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSMDTP*DSMVIS
Trigger: AGAGATCACCATGCTGTCCCAGGGCGTGTCCATGCT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGAAGGAATAGAGCATaGACACGCCCTGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCRRNRA*TRPGTA
Trigger: TGCTGTCCCAGGGCGTGTCCATGCTCTATTCCTTCT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGACGGGGTCAGCGGATaGTGTATCGGACATAGGGAA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKDGVSG*CIGHRE
Trigger: TTCCCTATGTCCGATACACCATCCGCTGACCCCGTC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCACTGTCACCCGAGCTaGAGTGCAGCGATGCAATCA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKHCHPS*SAAMQS
Trigger: TGATTGCATCGCTGCACTCCAGCTCGGGTGACAGTG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTGGACAGCGGCGAGCTaGACATCCCCTGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRWTAAS*TSPVPG
Trigger: GCCCGGCACAGGGGATGTCCAGCTCGCCGCTGTCCA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGGGCTGATTTCCGTTaGGTTCAACCATGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCWADFR*VQPCPV
Trigger: TACAGGGCATGGTTGAACTCAACGGAAATCAGCCCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTTCTCTTGCAGGTCTaGGCCAAACACAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLLLQV*AKHSHL
Trigger: CAAGTGGCTGTGTTTGGCTCAGACCTGCAAGAGAAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTTCTCTTGCAGGTCTaGGCCAAACACAGCCACTTG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLLLQV*AKHSHL
Trigger: CAAGTGGCTGTGTTTGGCTCAGACCTGCAAGAGAAG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAAGGCAGGGCCAAGTTaGGGAAACCATTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCKAGPS*GNHSCR
Trigger: CCTACAAGAATGGTTTCCTCAACTTGGCCCTGCCTT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGTCGAGGAACTGTTTaGGGGTCATCTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSRGTV*GSSPHH
Trigger: ATGGTGAGGAGATGACCCTCAAACAGTTCCTCGACT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTTGGCAGCTGGCATaGAGAAGGAATAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKAWQLA*RRNRAW
Trigger: CCATGCTCTATTCCTTCTTCATGCCAGCTGCCAAGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATCTCTGTCATCGGCTaGTCCAACCGTTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKISVIG*SNRSLS
Trigger: GCTCAAGGAACGGTTGGATCAGCCGATGACAGAGAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGCCTAGGCTGGTCTTaGACTCCTGGGCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKCLGWS*TPGLKQ
Trigger: TTGTTTGAGCCCAGGAGTTCAAGACCAGCCTAGGCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGCTACTCAGGAGGCTaGGGCAGGAAATCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSYSGG*GRKSLE
Trigger: TTCAAGAGATTTCCTGCCTCAGCCTCCTGAGTAGCT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCTATGTCTGCTTCACTaGCGTTCTTGGCCATTCCGT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLCLLH*RSWPFR
Trigger: ACGGAATGGCCAAGAACGGCAGTGAAGCAGACATAG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTGGAGCCGCTTCATTaGCTCATGGCCCAACACATA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLEPLH*LMAQHI
Trigger: TATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCAGGCCCCGCGTGTCTaGCACCACCAGCTTGATGCC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRQAPRV*HHQLDA
Trigger: GGCATCAAGCTGGTGGTGGCAGACACGCGGGGCCTG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTATAGCACTGAGTGGCTaGTCCCCATTGGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCIALSG*SPLESV
Trigger: CACAGATTCCAATGGGGAGCAGCCACTCAGTGCTAT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTTGCCCAGCTTCTCTTaGAGGTCTGAGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCLPSFS*RSEPNT
Trigger: TGTGTTTGGCTCAGACCTGCAAGAGAAGCTGGGCAA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCAGGTCTGTGGTCGCTaGAGCACCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRQVCGR*STRLRC
Trigger: GCAGCGCAGCCTGGTGCTGCAGCGACCACAGACCTG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAAGTTGTGCAGCAGCTaGCGGATGTTGTTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCKLCSS*RMLFEY
Trigger: GTACTCGAACAACATCCGGCAGCTGCTGCACAACTT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGTGAATTCGGGGACCTaGACAGACTGCAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRVNSGT*TDCRNV
Trigger: CACATTCCTGCAGTCTGTGCAGGTCCCCGAATTCAC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGCCCGGAGGTTGGATaGAGCCACGATGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKCPEVG*SHDEIH
Trigger: ATGGATTTCATCGTGGCTGCATCCAACCTCCGGGCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTCCTCACCATTAGGCTaGAGCCCTTGTACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSSPLG*SPCTSK
Trigger: CTTTGAGGTACAAGGGCTGCAGCCTAATGGTGAGGA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTTCACTGCCGTTCTTaGCCATTCCGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLHCRS*PFRWLA
Trigger: TGCCAACCAACGGAATGGCCAAGAACGGCAGTGAAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCGCTTCATTGCCTCATaGCCCAACACATACAGCTGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKRFIAS*PNTYSC
Trigger: GCAGCTGTATGTGTTGGGCCATGAGGCAATGAAGCG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCGCTTCATTGCCTCATaGCCCAACACATACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRRFIAS*PNTYSC
Trigger: GCAGCTGTATGTGTTGGGCCATGAGGCAATGAAGCG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTGATACCAGGACACTaGATGTCTGGAGCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLIPGH*MSGAAS
Trigger: TGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGTGAGCACCACCACCTaGAAACCACTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRVSTTT*KPLRKS
Trigger: GGACTTCCTTAGTGGTTTCCAGGTGGTGGTGCTCAC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCAGGGCGAGAAAACTTaGCGAAGTCCGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKQGEKT*RSPSPQ
Trigger: TTGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATTTTGCTGCACTGCTaGCAGGGCTCGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKILLHC*QGSSIH
Trigger: GTGAATGCTCGAGCCCTGCCAGCAGTGCAGCAAAAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTTCTCAGGTGGGTCCTaGCTGGAACTGTACGACTCT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKFSGGS*LELYDS
Trigger: AGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGATGGACTTCTCAGGTaGGTCCTGGCTGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRDGLLR*VLAGTV
Trigger: TACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTCTTCAGGGTACAGATaGGGATGGACTTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSSGYR*GWTSQV
Trigger: CACCTGAGAAGTCCATCCCCATCTGTACCCTGAAGA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATGTTGTTCGAGTACTaGGTGTGCCAGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKMLFEY*VCQWWQ
Trigger: CTGCCACCACTGGCACACCCAGTACTCGAACAACAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATAGTACTGGTGACGTaGTGCGGCAAGGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKIVLVT*CGKGFR
Trigger: TCTGAACCCCTTGCCGCACCACGTCACCAGTACTAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGATAGTACTGGTGACGTaGTGCGGCAAGGGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRIVLVT*CGKGFR
Trigger: TCTGAACCCCTTGCCGCACCACGTCACCAGTACTAT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAGAAGGAATAGAGCATaGACACGCCCTGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKRRNRA*TRPGTA
Trigger: TGCTGTCCCAGGGCGTGTCCATGCTCTATTCCTTCT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCAGGTTCTGCCAGTaGGGCCACCAAGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKVRFCQ*GHQGFK
Trigger: TTTAAATCCTTGGTGGCCTCACTGGCAGAACCTGAC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGTCAGGTTCTGCCAGTaGGGCCACCAAGGATTTAAA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRVRFCQ*GHQGFK
Trigger: TTTAAATCCTTGGTGGCCTCACTGGCAGAACCTGAC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTTTCTGCTGGCTGCTTaGAGAGGCCTTCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCFLLAA*RGLQTH
Trigger: ATGAGTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGTCGAGGAACTGTTTaGGGGTCATCTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSRGTV*GSSPHH
Trigger: ATGGTGAGGAGATGACCCTCAAACAGTTCCTCGACT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCCTGGGACAGCATGGTaGTCTCTAATTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKPGTAW*SLICAL
Trigger: CAGAGCACAAATTAGAGATCACCATGCTGTCCCAGG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATAGCACTGAGTGGCTaGTCCCCATTGGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKIALSG*SPLESV
Trigger: CACAGATTCCAATGGGGAGCAGCCACTCAGTGCTAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAATCGTCATCATAGATaGGCTCCGTGTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRNRHHR*APCQDP
Trigger: TGGGTCCTGACACGGAGCGCATCTATGATGACGATT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGCTCTTGTGCCGGTCTaGAGAAGGAATGTCATAGTT +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCALVPV*RRNVIV
Trigger: AACTATGACATTCCTTCTGCAGACCGGCACAAGAGC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATCAGCTTGCTCTTGTaGCGGTCTGCAGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKISLLL*RSAEGM
Trigger: CATTCCTTCTGCAGACCGGCACAAGAGCAAGCTGAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGATCAGCTTGCTCTTGTaGCGGTCTGCAGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRISLLL*RSAEGM
Trigger: CATTCCTTCTGCAGACCGGCACAAGAGCAAGCTGAT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGGGATGATCTTCCCTaGAATCAGCTTGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCWDDLP*NQLALV
Trigger: CACAAGAGCAAGCTGATTGCAGGGAAGATCATCCCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCATCCCGAGCCCACTaGAGACAGAGCAAACAGATT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKSSRAH*RQSKQI
Trigger: AATCTGTTTGCTCTGTCTGCAGTGGGCTCGGGATGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATATGTGGATTCATTTaGCGCACAGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKICGFI*RTAAAA
Trigger: GGCTGCTGCAGCTGTGCGCCAAATGAATCCACATAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGTCACCCGGATATGTaGATTCATTTGGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKCHPDM*IHLAHS
Trigger: GCTGTGCGCCAAATGAATCCACATATCCGGGTGACA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCTTCAGGGTACAGATaGGGATGGACTTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKSSGYR*GWTSQV
Trigger: CACCTGAGAAGTCCATCCCCATCTGTACCCTGAAGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGTTGACATTTTCTGCTaGCTGCTTGAAGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCVDIFC*LLEEAF
Trigger: GAAGGCCTCTTCAAGCAGCCAGCAGAAAATGTCAAC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGGTCTGTGAGGTACTaGTTGACATTTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRGSVRY*LTFSAG
Trigger: GCCAGCAGAAAATGTCAACCAGTACCTCACAGACCC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTCTGTGAGGTACTaGTTGACATTTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKGSVRY*LTFSAG
Trigger: GCCAGCAGAAAATGTCAACCAGTACCTCACAGACCC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGTGTGGACAGCGTTTaGGCCCAGACCAGAACGGCG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGVDSV*AQTRTA
Trigger: CGCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCTGGGCAAACAGGTTaGCAGCAGCCATCACATAGT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKSGQTG*QQPSHS
Trigger: ACTATGTGATGGCTGCTGCCAACCTGTTTGCCCAGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCCCATTGGAATCTGTaGGGATCATTTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRPHWNL*GSFPLQ
Trigger: TTGGAGAGGAAATGATCCTCACAGATTCCAATGGGG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTTGATCTCCATGGGCTaGTTTCCGTTGAGTTCAACC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRLISMG*FPLSST
Trigger: GGTTGAACTCAACGGAAATCAGCCCATGGAGATCAA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCAGCCAGGCCCCCAATaGAGGCGTTTATGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRQPGPQ*RRLWVP
Trigger: TGGCACCCATAAACGCCTTCATTGGGGGCCTGGCTG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAAATGTATTAAGATCTaGGTGCCAGGCGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKKCIKI*VPGEVA
Trigger: AGCCACCTCGCCTGGCACTCAGATCTTAATACATTT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGCCTGGAAGCCAATGTaGAGCTGGGCAGGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRAWKPM*SWAGRE
Trigger: TTCTCGCCCTGCCCAGCTGCACATTGGCTTCCAGGC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGAAATACTTCTGCTTaGCCAGCTTCTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRGNTSA*PASLAG
Trigger: ACCTGCAAGAGAAGCTGGGCAAGCAGAAGTATTTCC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTACATTTTCTGCTGGCTaGTTGAAGAGGCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCTFSAG*LKRPSN
Trigger: GTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAAATGT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTCGAGTACTGGGTGTaGCAGTGGTGGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRFEYWV*QWWQAQ
Trigger: CTGGGCCTGCCACCACTGGCACACCCAGTACTCGAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAATGTCATAGTTTTCTaGCCGGAGGTTGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRNVIVF*PEVGCS
Trigger: GCTGCATCCAACCTCCGGGCAGAAAACTATGACATT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAATGTCATAGTTTTCTaGCCGGAGGTTGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKNVIVF*PEVGCS
Trigger: GCTGCATCCAACCTCCGGGCAGAAAACTATGACATT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGCTCTTGTGCCGGTCTaGAGAAGGAATGTCATAGTT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRALVPV*RRNVIV
Trigger: AACTATGACATTCCTTCTGCAGACCGGCACAAGAGC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAAGGCCAACCACGGCTaGTGTGGTCGTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRKANHG*CGRGNG
Trigger: GCCATTGCCACGACCACAGCAGCCGTGGTTGGCCTT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCGGCCGTTGTGGTTGTaGTTGTCCCTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRRPLWL*LSLPPP
Trigger: AGGAGGTGGCAGGGACAACCACAACCACAACGGCCG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGCCATTCCGTTGGTTaGCACCGAGGGCACTTCGGA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGHSVG*HRGHFG
Trigger: TCCGAAGTGCCCTCGGTGCCAACCAACGGAATGGCC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTTGACATTTTCTGCTaGCTGCTTGAAGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKVDIFC*LLEEAF
Trigger: GAAGGCCTCTTCAAGCAGCCAGCAGAAAATGTCAAC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTGGTCTTGAACTCCTaGGCTCAAACAAACCTCACT +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKLVLNS*AQTNLT
Trigger: AGTGAGGTTTGTTTGAGCCCAGGAGTTCAAGACCAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR CCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAATACAAAAAGTAGCTaGGCGTGGTGGCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRNTKSS*AWWQMP
Trigger: AGGCATCTGCCACCACGCCCAGCTACTTTTTGTATT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR TCA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGGATGCAGCCACGATaGAATCCATATGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: DLASWATARSQMGTLGWKWMQPR*NPYESC
Trigger: GCAACTTTCATATGGATTTCATCGTGGCTGCATCCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTGGATGCAGCCACGATaGAATCCATATGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRWMQPR*NPYESC
Trigger: GCAACTTTCATATGGATTTCATCGTGGCTGCATCCA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCCTTCCTGCCAAAGATaGGCTGAAGCCACGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRPSCQR*AEATGQ
Trigger: TTGCCCCGTGGCTTCAGCTCATCTTTGGCAGGAAGG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGCTACCAGTTCTGCTaGATCCTCCTCATTGCGGGG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGYQFC*ILLIAG
Trigger: CCCCGCAATGAGGAGGATGCAGCAGAACTGGTAGCC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGACATTTTCTGCTGGCTaGTTGAAGAGGCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRTFSAG*LKRPSN
Trigger: GTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAAATGT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCACTGGGCAGTGCCCTaGTCATGTAGGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRHWAVP*SCRVTA
Trigger: GGCTGTTACCCTACATGACCAGGGCACTGCCCAGTG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGACCCACACGGTTCTaGTGGCTTGTCACCCGGATA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGPTRF*WLVTRI
Trigger: TATCCGGGTGACAAGCCACCAGAACCGTGTGGGTCC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAACCAGCGCCCGCACGTaGCGGCCCAGCTTTCGCTTC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSTSART*RPSFRF
Trigger: GAAGCGAAAGCTGGGCCGCCACGTGCGGGCGCTGGT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTGATGCCACGGTTGTaGCAGAACTCACCCACTCGC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRLMPRL*QNSPTR
Trigger: GCGAGTGGGTGAGTTCTGTCACAACCGTGGCATCAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTGGCCGGCCATGCTaGGCACAGAACTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSGGRPC*AQNWCR
Trigger: CCTGCACCAGTTCTGTGCTCAGCATGGCCGGCCACC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGCACTTGTCCTCTGTaGGGACCTCTTTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGTCPL*GPLCPQ
Trigger: CTGAGGACAAAGAGGTCCTCACAGAGGACAAGTGCC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAGCACCTCCAAGGGCTaGGTGCCTGCCAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSTSKG*VPASRS
Trigger: ACTGCGGCTGGCAGGCACTCAGCCCTTGGAGGTGCT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACGAGCTGGACATCAATaGCGGTTCCCCGGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSRAGHQ*RFPGSR
Trigger: GCGCGACCCGGGGAACCGGCATTGATGTCCAGCTCG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAAGGGGATCACCACCTaGACATTGCCTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRKGITT*TLPLVP
Trigger: GGGCACCAAAGGCAATGTGCAGGTGGTGATCCCCTT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACAGGTCTGTGGTCGCTaGAGCACCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSQVCGR*STRLRC
Trigger: GCAGCGCAGCCTGGTGCTGCAGCGACCACAGACCTG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTCAGGAGGGAAGTTGTaGAGCAGCTGCCGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSGGKL*SSCRML
Trigger: CAACATCCGGCAGCTGCTGCACAACTTCCCTCCTGA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGAGGCATTGGCGCTCTaGAGCTCCTGGTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGREALAL*SSWSET
Trigger: TGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTCTTGGCCATTCCGTTaGTTGGCACCGAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSWPFR*LAPRAL
Trigger: AAGTGCCCTCGGTGCCAACCAACGGAATGGCCAAGA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGAAAGATCAGCCCACTaGGCAGTGCCCTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRERSAH*AVPWSC
Trigger: ACATGACCAGGGCACTGCCCAGTGGGCTGATCTTTC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCAGCTCACAGCCAATaGCCCCCGCACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSAAHSQ*PPHPPG
Trigger: TCCTGGTGGGTGCGGGGGCCATTGGCTGTGAGCTGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCAGGTGGGTCCTGGCTaGAACTGTACGACTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRQVGPG*NCTTLS
Trigger: TGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCCTGAGCTTGTGAGCTaGTCAGGAGGGAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRPELVS*SGGKLC
Trigger: GCACAACTTCCCTCCTGACCAGCTCACAAGCTCAGG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCATCAACAGAGGCATTaGCGCTCTGCAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRHQQRH*RSAAPG
Trigger: ACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAGCATGGACACGCCCTaGGACAGCATGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSMDTP*DSMVIS
Trigger: AGAGATCACCATGCTGTCCCAGGGCGTGTCCATGCT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAGCGAGGCGGGGCTGTaGTACCTCGGCCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSEAGL*YLGPVF
Trigger: AAAAACCGGGCCGAGGTATCACAGCCCCGCCTCGCT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTAGGTACTTTGACCTaGCTGACGATGCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRLGTLT*LTMPPR
Trigger: CCGTGGAGGCATCGTCAGTCAGGTCAAAGTACCTAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACCAGAACGGCGCTCCTaGGCTTGTGAGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSPERRS*ACELVR
Trigger: CCTGACCAGCTCACAAGCTCAGGAGCGCCGTTCTGG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTCCCCCACCTCAATTaGAAAACCAGGCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRFPHLN*KTRPGT
Trigger: TGTGCCTGGCCTGGTTTTTCAATTGAGGTGGGGGAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACAAGGGCTGAGTGCCTaGCAGCCGCAGTGTTCGCTC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSQGLSA*QPQCSL
Trigger: GAGCGAACACTGCGGCTGGCAGGCACTCAGCCCTTG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGTGAATTCGGGGACCTaGACAGACTGCAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRVNSGT*TDCRNV
Trigger: CACATTCCTGCAGTCTGTGCAGGTCCCCGAATTCAC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTGCCCGGAGGTTGGATaGAGCCACGATGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRCPEVG*SHDEIH
Trigger: ATGGATTTCATCGTGGCTGCATCCAACCTCCGGGCA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGTGAGCACCACCACCTaGAAACCACTAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRVSTTT*KPLRKS
Trigger: GGACTTCCTTAGTGGTTTCCAGGTGGTGGTGCTCAC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCGTTGTCCAGGGCATTaGCCACGCCATCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRRCPGH*PRHLGF
Trigger: AAAACCTAGATGGCGTGGCCAATGCCCTGGACAACG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTCTCAGGTGGGTCCTaGCTGGAACTGTACGACTCT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRFSGGS*LELYDS
Trigger: AGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGTCAGCCCAGGTCTGTaGTCGCTGCAGCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSVSPGL*SLQHQA
Trigger: AGCCTGGTGCTGCAGCGACCACAGACCTGGGCTGAC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTGTGGACAGCGTTTaGGCCCAGACCAGAACGGCG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSGVDSV*AQTRTA
Trigger: CGCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGCGCTCTGCAGCTCCTaGTCAGAAACATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRALCSS*SETWIL
Trigger: CAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGTCGTGGCAATGGCTaGGATGATCTTCCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGRGNG*DDLPCN
Trigger: ATTGCAGGGAAGATCATCCCAGCCATTGCCACGACC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAGAAGGAATAGAGCATaGACACGCCCTGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRRRNRA*TRPGTA
Trigger: TGCTGTCCCAGGGCGTGTCCATGCTCTATTCCTTCT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACAGCCAGGCCCCCAATaGAGGCGTTTATGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSQPGPQ*RRLWVP
Trigger: TGGCACCCATAAACGCCTTCATTGGGGGCCTGGCTG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAAGGCAGGGCCAAGTTaGGGAAACCATTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRKAGPS*GNHSCR
Trigger: CCTACAAGAATGGTTTCCTCAACTTGGCCCTGCCTT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCCTGGGACAGCATGGTaGTCTCTAATTTGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRPGTAW*SLICAL
Trigger: CAGAGCACAAATTAGAGATCACCATGCTGTCCCAGG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGACATGTGGCCACAGTTaGCAAAATGGGTTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRTCGHS*QNGFPQ
Trigger: CTGCGGAAACCCATTTTGTCAACTGTGGCCACATGT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGTTATTTTGCTGCACTaGTGGCAGGGCTCGAGCATT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRVILLH*WQGSSI
Trigger: AATGCTCGAGCCCTGCCAGCAGTGCAGCAAAATAAC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCTGGTTGACATTTTCTaGTGGCTGCTTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRLVDIF*WLLEEA
Trigger: GGCCTCTTCAAGCAGCCAGCAGAAAATGTCAACCAG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAATCCATATGAAAGTTaGTGTCATCATCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ASWATARSQMGTLGWKGCNPYES*CHHPSQ
Trigger: TTGAGAAGGATGATGACAGCAACTTTCATATGGATT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAAGGCCAACCACGGCTaGTGTGGTCGTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSKANHG*CGRGNG
Trigger: GCCATTGCCACGACCACAGCAGCCGTGGTTGGCCTT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTCCTCACCATTAGGCTaGAGCCCTTGTACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSSPLG*SPCTSK
Trigger: CTTTGAGGTACAAGGGCTGCAGCCTAATGGTGAGGA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATGGACAGCGGCGAGCTaGACATCAATGCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSWTAAS*TSMPVP
Trigger: GGGAACCGGCATTGATGTCCAGCTCGCCGCTGTCCA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGTTAGAACCCGGCTTTaGATCAGGCCCGGACACGCG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSVRTRL*IRPGHA
Trigger: CGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAAC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTGTCACCCGGATATGTaGATTCATTTGGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRCHPDM*IHLAHS
Trigger: GCTGTGCGCCAAATGAATCCACATATCCGGGTGACA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTCTGGGCAAACAGGTTaGCAGCAGCCATCACATAGT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSGQTG*QQPSHS
Trigger: ACTATGTGATGGCTGCTGCCAACCTGTTTGCCCAGA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCCCCATTGGAATCTGTaGGGATCATTTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRPHWNL*GSFPLQ
Trigger: TTGGAGAGGAAATGATCCTCACAGATTCCAATGGGG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTTCTGCTGGCTGCTTaGAGAGGCCTTCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRFLLAA*RGLQTH
Trigger: ATGAGTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCCCACTGCAGGGTGTaGTCGATGGCATTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSAHCRV*SMALGK
Trigger: CTTCCCTAATGCCATCGAGCACACCCTGCAGTGGGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGGACCTGCACAGACTaGAGGAATGTGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSGTCTD*RNVATA
Trigger: TGCTGTGGCCACATTCCTGCAGTCTGTGCAGGTCCC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGCTCTTGTGCCGGTCTaGAGAAGGAATGTCATAGTT +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRALVPV*RRNVIV
Trigger: AACTATGACATTCCTTCTGCAGACCGGCACAAGAGC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTGGGATGATCTTCCCTaGAATCAGCTTGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRWDDLP*NQLALV
Trigger: CACAAGAGCAAGCTGATTGCAGGGAAGATCATCCCA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAACACGCGACGTTTCTTaGACAGCGGCGAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSTRDVS*TAASWT
Trigger: TGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGACCCACACGGTTCTaGTGGCTTGTCACCCGGATA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSGPTRF*WLVTRI
Trigger: TATCCGGGTGACAAGCCACCAGAACCGTGTGGGTCC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACAGACTGCAGGAATGTaGCCACAGCAGCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSQTAGM*PQQLGP
Trigger: AGGACCGAGCTGCTGTGGCCACATTCCTGCAGTCTG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAATGCCAGCTTCCGGATaGGGTCCTCGTCCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSMPASG*GPRPGY
Trigger: ATAACCTGGACGAGGACCTCATCCGGAAGCTGGCAT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATGGGCAGAGTGGCTTTaGGCTCCTCTAGACGACTGT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSWAEWL*APLDDC
Trigger: ACAGTCGTCTAGAGGAGCTCAAAGCCACTCTGCCCA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCACATTGCCTTTGGTaGCCAGTGTGCCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSAHCLW*PVCLTP
Trigger: TGGAGTCAGGCACACTGGGCACCAAAGGCAATGTGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAAGGGGATCACCACCTaGACATTGCCTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSKGITT*TLPLVP
Trigger: GGGCACCAAAGGCAATGTGCAGGTGGTGATCCCCTT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGTACTGGTGACGTGGTaGGGCAAGGGGTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSVLVTW*GKGFRE
Trigger: TTCTCTGAACCCCTTGCCGCACCACGTCACCAGTAC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGAAAGATCAGCCCACTaGGCAGTGCCCTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSERSAH*AVPWSC
Trigger: ACATGACCAGGGCACTGCCCAGTGGGCTGATCTTTC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACATCAACAGAGGCATTaGCGCTCTGCAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSHQQRH*RSAAPG
Trigger: ACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAGCATGGACACGCCCTaGGACAGCATGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSMDTP*DSMVIS
Trigger: AGAGATCACCATGCTGTCCCAGGGCGTGTCCATGCT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGACGGGGTCAGCGGATaGTGTATCGGACATAGGGAA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSDGVSG*CIGHRE
Trigger: TTCCCTATGTCCGATACACCATCCGCTGACCCCGTC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAGGGAACACCAGACTTaGCTAGTTGGGCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSREHQT*LVGPLP
Trigger: TGGCAGTGGCCCAACTAGCCAAGTCTGGTGTTCCCT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCTTGGCAGCTGGCATaGAGAAGGAATAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSAWQLA*RRNRAW
Trigger: CCATGCTCTATTCCTTCTTCATGCCAGCTGCCAAGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAATCTCTGTCATCGGCTaGTCCAACCGTTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSISVIG*SNRSLS
Trigger: GCTCAAGGAACGGTTGGATCAGCCGATGACAGAGAT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCCAGGTTATTTTGCTaGACTGCTGGCAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSRLFC*TAGRAR
Trigger: TCGAGCCCTGCCAGCAGTGCAGCAAAATAACCTGGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACTTCACTGCCGTTCTTaGCCATTCCGTTGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSLHCRS*PFRWLA
Trigger: TGCCAACCAACGGAATGGCCAAGAACGGCAGTGAAG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAATTTTGCTGCACTGCTaGCAGGGCTCGAGCATTCAC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSILLHC*QGSSIH
Trigger: GTGAATGCTCGAGCCCTGCCAGCAGTGCAGCAAAAT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACGTTGTCCAGGGCATTaGCCACGCCATCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSRCPGH*PRHLGF
Trigger: AAAACCTAGATGGCGTGGCCAATGCCCTGGACAACG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAATGTTGTTCGAGTACTaGGTGTGCCAGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSMLFEY*VCQWWQ
Trigger: CTGCCACCACTGGCACACCCAGTACTCGAACAACAT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCGCTCTGCAGCTCCTaGTCAGAAACATGGATCTTG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSALCSS*SETWIL
Trigger: CAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCATGGCAAAGTTCTTaGGCAGCTCACAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSWQSS*AAHSQW
Trigger: CCATTGGCTGTGAGCTGCTCAAGAACTTTGCCATGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACTATGTCTGCTTCACTaGCGTTCTTGGCCATTCCGT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSLCLLH*RSWPFR
Trigger: ACGGAATGGCCAAGAACGGCAGTGAAGCAGACATAG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATTGCCCAGCTTCTCTTaGAGGTCTGAGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSLPSFS*RSEPNT
Trigger: TGTGTTTGGCTCAGACCTGCAAGAGAAGCTGGGCAA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAATCGTCATCATAGATaGGCTCCGTGTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSNRHHR*APCQDP
Trigger: TGGGTCCTGACACGGAGCGCATCTATGATGACGATT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACTGGTTGACATTTTCTaGTGGCTGCTTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSLVDIF*WLLEEA
Trigger: GGCCTCTTCAAGCAGCCAGCAGAAAATGTCAACCAG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAAGTTGTGCAGCAGCTaGCGGATGTTGTTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSKLCSS*RMLFEY
Trigger: GTACTCGAACAACATCCGGCAGCTGCTGCACAACTT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCCTCACCATTAGGCTaGAGCCCTTGTACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSSPLG*SPCTSK
Trigger: CTTTGAGGTACAAGGGCTGCAGCCTAATGGTGAGGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAATATGTGGATTCATTTaGCGCACAGCTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSICGFI*RTAAAA
Trigger: GGCTGCTGCAGCTGTGCGCCAAATGAATCCACATAT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGAAATACTTCTGCTTaGCCAGCTTCTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSGNTSA*PASLAG
Trigger: ACCTGCAAGAGAAGCTGGGCAAGCAGAAGTATTTCC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAATGTCATAGTTTTCTaGCCGGAGGTTGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSNVIVF*PEVGCS
Trigger: GCTGCATCCAACCTCCGGGCAGAAAACTATGACATT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGTTGACATTTTCTGCTaGCTGCTTGAAGAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSVDIFC*LLEEAF
Trigger: GAAGGCCTCTTCAAGCAGCCAGCAGAAAATGTCAAC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR TCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATGGATGCAGCCACGATaGAATCCATATGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSWMQPR*NPYESC
Trigger: GCAACTTTCATATGGATTTCATCGTGGCTGCATCCA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAACATTTTCTGCTGGCTaGTTGAAGAGGCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSTFSAG*LKRPSN
Trigger: GTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAAATGT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACCACAGTTGACAAAATaGGTTTCCGCAGGCATTATT +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSPQLTK*VSAGII
Trigger: AATAATGCCTGCGGAAACCCATTTTGTCAACTGTGG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR CCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCAATGAAGTTGATTTaGGCAGTGGTTACAATAGTG +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSMKLI*AVVTIV
Trigger: CACTATTGTAACCACTGCCCAAATCAACTTCATTGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR GCA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAATCCATATGAAAGTTaGTGTCATCATCCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSNPYES*CHHPSQ
Trigger: TTGAGAAGGATGATGACAGCAACTTTCATATGGATT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 90 bp TGGTGGCAGGCCCAGGTCACGCAGTCAGCCCAGGTCTGTGGTCGCTaGAGCACCAGGCTGCGCTGCACAGCCTCCAGCACCTCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: WWQAQVTQSAQVCGR*STRLRCTASSTSKG
Trigger: GCCCTTGGAGGTGCTGGAGGCTGTGCAGCGCAGCCTGGTGCTGCAGCGACCACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp CCCTTCCCTAGCCTGAGCTGGGAGGCTCCTCTCCCTAGAAACATCTaGGCCCCCGACGTGTCCAGTCTCGCAGTCCTGAGCCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PFPSLSWEAPLPRNI*APDVSSLAVLSLQA
Trigger: CGCCTGGAGGCTCAGGACTGCGAGACTGGACACGTCGGGGGCCCAGATGTTTCTAGGGAGAGGAGCCTCCCAGCTCAGGCTAGGGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGCTGCATCCTCCTCATaGCGGGGCCGAGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCAASSS*RGRGGR
Trigger: CCGGCCACCTCGGCCCCGCAATGAGGAGGATGCAGC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS TCA 90 bp TCTGCTGCATCCTCCTCATTGCGGGGCCGAGGTGGCCGGCCATGCTaGGCACAGAACTGGTGCAGGGCCTGGAAGCCAATGTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SAASSSLRGRGGRPC*AQNWCRAWKPMCSW
Trigger: CCAGCTGCACATTGGCTTCCAGGCCCTGCACCAGTTCTGTGCTCAGCATGGCCGGCCACCTCGGCCCCGCAATGAGGAGGATGCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS TCA 90 bp TGCAGCACCAGGCTGCGCTGCACAGCCTCCAGCACCTCCAAGGGCTaGGTGCCTGCCAGCCGCAGTGTTCGCTCCACAAACTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: CSTRLRCTASSTSKG*VPASRSVRSTNLGS
Trigger: AGACCCCAAGTTTGTGGAGCGAACACTGCGGCTGGCAGGCACTCAGCCCTTGGAGGTGCTGGAGGCTGTGCAGCGCAGCCTGGTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS TCA 90 bp TCGTCAGCTCAGGAAGAGCTGGGCTCCGGTGTCCCTTCCCTAGCCTaGGCTGGGAGGCTCCTCTCCCTAGAAACATCTGGGCCCCCGACG +
Preference number: 5 (lower is better)
Translates to: SSAQEELGSGVPSLA*AGRLLSLETSGPPT
Trigger: CGTCGGGGGCCCAGATGTTTCTAGGGAGAGGAGCCTCCCAGCTCAGGCTAGGGAAGGGACACCGGAGCCCAGCTCTTCCTGAGCTGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412206.5
ENST00000427561.5
CDS CCA 90 bp TGCAGCAGCTGCCGGATGTTGTTCGAGTACTGGGTGTGCCAGTGGTaGCAGGCCCAGGTCACGCAGTCAGCCCAGGTCTGTGGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: CSSCRMLFEYWVCQW*QAQVTQSAQVCGRC
Trigger: GCAGCGACCACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp AGCTCAGGAAGAGCTGGGCTCCGGTGTCCCTTCCCTAGCCTGAGCTaGGAGGCTCCTCTCCCTAGAAACATCTGGGCCCCCGACGTGTCC +
Preference number: 5 (lower is better)
Translates to: SSGRAGLRCPFPSLS*EAPLPRNIWAPDVS
Trigger: GGACACGTCGGGGGCCCAGATGTTTCTAGGGAGAGGAGCCTCCCAGCTCAGGCTAGGGAAGGGACACCGGAGCCCAGCTCTTCCTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412206.5
ENST00000427561.5
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCTGCATCCTCCTCATaGCGGGGCCGAGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKAASSS*RGRGGR
Trigger: CCGGCCACCTCGGCCCCGCAATGAGGAGGATGCAGC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS TCA 90 bp GGACATCCCCTGTGCCGGGCGGAAGCCTCGCCTTCCTGCCAAAGATaGGCTGAAGCCACGGGGCAACGGAAGAGCAAACCACCTCTGTCG +
Preference number: 5 (lower is better)
Translates to: GHPLCRAEASPSCQR*AEATGQRKSKPPLS
Trigger: CGACAGAGGTGGTTTGCTCTTCCGTTGCCCCGTGGCTTCAGCTCATCTTTGGCAGGAAGGCGAGGCTTCCGCCCGGCACAGGGGATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS GCA 90 bp CAGGCTGCGCTGCACAGCCTCCAGCACCTCCAAGGGCTGAGTGCCTaGCAGCCGCAGTGTTCGCTCCACAAACTTGGGGTCTGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: QAALHSLQHLQGLSA*QPQCSLHKLGVCEV
Trigger: TACCTCACAGACCCCAAGTTTGTGGAGCGAACACTGCGGCTGGCAGGCACTCAGCCCTTGGAGGTGCTGGAGGCTGTGCAGCGCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp GCCATTCCGTTGGTTGGCACCGAGGGCACTTCGGACAACACGGACTaGGCAGGGGAGCAGTTAGAACCCGGCTTTGGATCAGGCCCGGAC +
Preference number: 5 (lower is better)
Translates to: AIPLVGTEGTSDNTD*AGEQLEPGFGSGPD
Trigger: GTCCGGGCCTGATCCAAAGCCGGGTTCTAACTGCTCCCCTGCCCAGTCCGTGTTGTCCGAAGTGCCCTCGGTGCCAACCAACGGAATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 90 bp TCCACGCCCAGGCCCCGCAGGCCTGATACCAGGACACTGGATGTCTaGAGCCGCTTCATTGCCTCATGGCCCAACACATACAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: STPRPRRPDTRTLDV*SRFIASWPNTYSCR
Trigger: CCGGCAGCTGTATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAGGCCTGCGGGGCCTGGGCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 90 bp TTGTGCAGCAGCTGCCGGATGTTGTTCGAGTACTGGGTGTGCCAGTaGTGGCAGGCCCAGGTCACGCAGTCAGCCCAGGTCTGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: LCSSCRMLFEYWVCQ*WQAQVTQSAQVCGR
Trigger: GCGACCACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp CCGCTCTCGTCGTTACAGCACAGCTCAAGCACCAGCGCCCGCACGTaGCGGCCCAGCTTTCGCTTCGACACACGGCTCACAATCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PLSSLQHSSSTSART*RPSFRFDTRLTISV
Trigger: GACAGAGATTGTGAGCCGTGTGTCGAAGCGAAAGCTGGGCCGCCACGTGCGGGCGCTGGTGCTTGAGCTGTGCTGTAACGACGAGAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp GGGTGGACAAGGGGCCAGCCTAGAGGAGCAGACGGGGTCAGCGGATaGTGTATCGGACATAGGGAACCTCGACATCCTCGCCGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: GWTRGQPRGADGVSG*CIGHREPRHPRRSR
Trigger: ACGAGAGCGGCGAGGATGTCGAGGTTCCCTATGTCCGATACACCATCCGCTGACCCCGTCTGCTCCTCTAGGCTGGCCCCTTGTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGGGTGTGGACAGCGTTaGGGCCCAGACCAGAACGGC +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCGCGQR*GPDQNG
Trigger: GCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACCC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 90 bp GGGAAGTTGTGCAGCAGCTGCCGGATGTTGTTCGAGTACTGGGTGTaGCAGTGGTGGCAGGCCCAGGTCACGCAGTCAGCCCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GKLCSSCRMLFEYWV*QWWQAQVTQSAQVC
Trigger: ACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCACAACTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp TTCGGACAACACGGACTGGGCAGGGGAGCAGTTAGAACCCGGCTTTaGATCAGGCCCGGACACGCGACGTTTCTTGGACAGCGGCGAGCT +
Preference number: 5 (lower is better)
Translates to: FGQHGLGRGAVRTRL*IRPGHATFLGQRRA
Trigger: AGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAACTGCTCCCCTGCCCAGTCCGTGTTGTCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 90 bp TCAGGAGGGAAGTTGTGCAGCAGCTGCCGGATGTTGTTCGAGTACTaGGTGTGCCAGTGGTGGCAGGCCCAGGTCACGCAGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SGGKLCSSCRMLFEY*VCQWWQAQVTQSAQ
Trigger: CTGGGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCACAACTTCCCTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp AGCGGGGAGTGCAGGAGGGAAGTGAGGCTTGGACATCCATCAGGGTaGCATGATGGCAGGAGCGGTAACTTGCAATGCCGGTTCCCCGGG +
Preference number: 5 (lower is better)
Translates to: SGECRREVRLGHPSG*HDGRSGNLQCRFPG
Trigger: CCCGGGGAACCGGCATTGCAAGTTACCGCTCCTGCCATCATGCCACCCTGATGGATGTCCAAGCCTCACTTCCCTCCTGCACTCCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457753.5
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGGCCATTCCGTTGGTaGGCACCGAGGGCACTTCGG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCWPFRW*APRALR
Trigger: CCGAAGTGCCCTCGGTGCCAACCAACGGAATGGCCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTATGCGGGCATCCACGTaGTCCAGGGCATTGGCCACG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCMRAST*SRALAT
Trigger: CGTGGCCAATGCCCTGGACAACGTGGATGCCCGCAT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS TCA 90 bp GGCAGTGACAGGCACATAGCTGTTGAGCTCAGCGAGGCGGGGCTGTaGTACCTCGGCCCGGTTTTTACCGATGTCCTCCTCCCGCAGGTA +
Preference number: 5 (lower is better)
Translates to: GSDRHIAVELSEAGL*YLGPVFTDVLLPQV
Trigger: TACCTGCGGGAGGAGGACATCGGTAAAAACCGGGCCGAGGTATCACAGCCCCGCCTCGCTGAGCTCAACAGCTATGTGCCTGTCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
CDS TCA 90 bp AGAAGAGCTGCCCAAACAGGCCCCGCGTGTCTGCCACCACCAGCTTaGTGCCACGGTTGTGACAGAACTCACCCACTCGCAGCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: RRAAQTGPACLPPPA*CHGCDRTHPLAAGP
Trigger: AGGACCAGCTGCGAGTGGGTGAGTTCTGTCACAACCGTGGCATCAAGCTGGTGGTGGCAGACACGCGGGGCCTGTTTGGGCAGCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000442035.5
CDS TCA 90 bp TCCCCTGTGCCGGGCGGAAGCCTCGCCTTCCTGCCAAAGATGAGCTaGAGCCACGGGGCAACGGAAGAGCAAACCACCTCTGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: SPVPGGSLAFLPKMS*SHGATEEQTTSVVQ
Trigger: TTGTACGACAGAGGTGGTTTGCTCTTCCGTTGCCCCGTGGCTTCAGCTCATCTTTGGCAGGAAGGCGAGGCTTCCGCCCGGCACAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGGCCATTCCGTTGGTaGGCACCGAGGGCACTTCGG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKWPFRW*APRALR
Trigger: CCGAAGTGCCCTCGGTGCCAACCAACGGAATGGCCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGGCGCTGGAGGCACTaGTCCTCTGTGAGGACCTCT +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCWRWRH*SSVRTS
Trigger: AGAGGTCCTCACAGAGGACAAGTGCCTCCAGCGCCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTGGTCAGGAGGGAAGTaGTGCAGCAGCTGCCGGATG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCWSGGK*CSSCRM
Trigger: CATCCGGCAGCTGCTGCACAACTTCCCTCCTGACCA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGAGGGAACACCAGACTaGGCTAGTTGGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCEGTPD*ASWATA
Trigger: GGCAGTGGCCCAACTAGCCAAGTCTGGTGTTCCCTC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 90 bp CATGACTTCCTGGGCAGCCAGGCCCCCAATGAAGGCGTTTATGGGTaGCAGATCCCCAGCAGCCACATATGCCAGCTTCCGGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: HDFLGSQAPNEGVYG*QIPSSHICQLPDEV
Trigger: GACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGGGATCTGGCACCCATAAACGCCTTCATTGGGGGCCTGGCTGCCCAGGAAGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 90 bp GCAGGGCCTGGAAGCCAATGTGCAGCTGGGCAGGGCGAGAAAACTTaGCGAAGTCCGTCACCACAAAGTCAGGTTCTGCCAGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: AGPGSQCAAGQGEKT*RSPSPQSQVLPVRP
Trigger: TGGCCTCACTGGCAGAACCTGACTTTGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTGCCCAGCTGCACATTGGCTTCCAGGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CCA 90 bp AGCGGGGAGTGCAGGAGGGAAGTGAGGCTTGGACATCCATCAGGGTaGCATGATGGCAGGAGCGGTAACTTGCTGAGAACCCAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SGECRREVRLGHPSG*HDGRSGNLLRTQSP
Trigger: TGGGGACTGGGTTCTCAGCAAGTTACCGCTCCTGCCATCATGCCACCCTGATGGATGTCCAAGCCTCACTTCCCTCCTGCACTCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTACCTGCACATTGCCTTaGGTGCCCAGTGTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCTCTLP*VPSVPD
Trigger: GTCAGGCACACTGGGCACCAAAGGCAATGTGCAGGT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTAGCAGCTGCCGGATGTaGTTCGAGTACTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSSCRM*FEYWVC
Trigger: GCACACCCAGTACTCGAACAACATCCGGCAGCTGCT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGGTCAGGAGGGAAGTaGTGCAGCAGCTGCCGGATG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKWSGGK*CSSCRM
Trigger: CATCCGGCAGCTGCTGCACAACTTCCCTCCTGACCA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTATCTTGACGCCAGACTaGGGGGTGAATTCGGGGACC +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCILTPD*GVNSGT
Trigger: GGTCCCCGAATTCACCCCCAAGTCTGGCGTCAAGAT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTCATCAACAGAGGCATaGGCGCTCTGCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSSTEA*ALCSSW
Trigger: CCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGGGAACACCAGACTaGGCTAGTTGGGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKEGTPD*ASWATA
Trigger: GGCAGTGGCCCAACTAGCCAAGTCTGGTGTTCCCTC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCGGCTCACAGCAGCCTaGACCTCCCAGGTTGAAACG +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRRLTAA*TSQVET
Trigger: CGTTTCAACCTGGGAGGTCAAGGCTGCTGTGAGCCG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS TCA 90 bp TTTCTCCACCCTCCCCGCAGCCCAGCCCAATCATGGCAAAGTTCTTaGGCAGCTCACAGCCAATGGCCCCCGCACCCACCAGGAAATACT +
Preference number: 5 (lower is better)
Translates to: FLHPPRSPAQSWQSS*AAHSQWPPHPPGNT
Trigger: AGTATTTCCTGGTGGGTGCGGGGGCCATTGGCTGTGAGCTGCTCAAGAACTTTGCCATGATTGGGCTGGGCTGCGGGGAGGGTGGAGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS TCA 90 bp AACGCCCCTTCAGCACGTCCCTTCGGCACGCTGATCCGCCCCTCGTaGATAATTCACAAGCCGAGAACCTTCAGCGGACCAGGTGCGAAA +
Preference number: 5 (lower is better)
Translates to: NAPSARPFGTLIRPS*IIHKPRTFSGPGAK
Trigger: TTTCGCACCTGGTCCGCTGAAGGTTCTCGGCTTGTGAATTATTCACGAGGGGCGGATCAGCGTGCCGAAGGGACGTGCTGAAGGGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGCCGTTGTGGTTGTGGTaGTCCCTGCCACCTCCTTAC +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRPLWLW*SLPPPY
Trigger: GTAAGGAGGTGGCAGGGACAACCACAACCACAACGG...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTTCTTGGCCATTCCGTaGGTTGGCACCGAGGGCACT +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRFLAIP*VGTEGT
Trigger: AGTGCCCTCGGTGCCAACCAACGGAATGGCCAAGAA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTGCCAAACACAGCCACTaGCCCGTCATAACGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCAKHSH*PVITVL
Trigger: CAGAACCGTTATGACGGGCAAGTGGCTGTGTTTGGC...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTCACGGTTCTGGTGGCTaGTCACCCGGATATGTGGAT +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCHGSGG*SPGYVD
Trigger: ATCCACATATCCGGGTGACAAGCCACCAGAACCGTG...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTACGTTGTCCAGGGCATaGGCCACGCCATCTAGGTTT +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCTLSRA*ATPSRF
Trigger: AAACCTAGATGGCGTGGCCAATGCCCTGGACAACGT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGACCTGCACATTGCCTTaGGTGCCCAGTGTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRTCTLP*VPSVPD
Trigger: GTCAGGCACACTGGGCACCAAAGGCAATGTGCAGGT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCATCAACAGAGGCATaGGCGCTCTGCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSSTEA*ALCSSW
Trigger: CCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCTGGGCAGAGTGGCTTaGAGCTCCTCTAGACGACTG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKLGRVA*SSSRRL
Trigger: CAGTCGTCTAGAGGAGCTCAAAGCCACTCTGCCCAG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTTCCCTGCAATCAGCTaGCTCTTGTGCCGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCFPAIS*LLCRSA
Trigger: TGCAGACCGGCACAAGAGCAAGCTGATTGCAGGGAA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS TCA 90 bp AAGGATGATGTTCTTAGCGATCTCCACGCCCAGGCCCCGCAGGCCTaGTACCAGGACACTGGATGTCTGGAGCCGCTTCATTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: KDDVLSDLHAQAPQA*YQDTGCLEPLHCLM
Trigger: CATGAGGCAATGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAGGCCTGCGGGGCCTGGGCGTGGAGATCGCTAAGAACATCATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS TCA 90 bp TTATGGGTGCCAGATCCCCAGCAGCCACATATGCCAGCTTCCGGATaGGGTCCTCGTCCAGGTTATTTTGCTGCACTGCTGGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LWVPDPQQPHMPASG*GPRPGYFAALLAGL
Trigger: GAGCCCTGCCAGCAGTGCAGCAAAATAACCTGGACGAGGACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGGGATCTGGCACCCATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCTGGAGCCGCTTCATaGCCTCATGGCCCAACACAT +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSGAAS*PHGPTH
Trigger: ATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTTCGCTCCACAAACTaGGGGTCTGTGAGGTACTGG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKVRSTN*GSVRYW
Trigger: CCAGTACCTCACAGACCCCAAGTTTGTGGAGCGAAC...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTCAGAAACATGGATCTaGACGCCAGACTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCSETWI*TPDLGV
Trigger: CACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTTTTCTGCCCGGAGGTaGGATGCAGCCACGATGAAA +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCFSARR*DAATMK
Trigger: TTTCATCGTGGCTGCATCCAACCTCCGGGCAGAAAA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGCAATCAGCTTGCTCTaGTGCCGGTCTGCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRAISLL*CRSAEG
Trigger: TCCTTCTGCAGACCGGCACAAGAGCAAGCTGATTGC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTGCCCCTGCACAACCTaGTACAGCTCCAGACACACA +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRCPCTT*YSSRHT
Trigger: TGTGTGTCTGGAGCTGTACAAGGTTGTGCAGGGGCA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp ACAATAAAGCCTGCTGTGGAAGTGAAATCTGGTGGTGGGGGTGACTaGGTCCACATGCTGGAGATGGGAGGACCCAGCGTCACTTCCCCT +
Preference number: 5 (lower is better)
Translates to: TIKPAVEVKSGGGGD*VHMLEMGGPSVTSP
Trigger: AGGGGAAGTGACGCTGGGTCCTCCCATCTCCAGCATGTGGACCCAGTCACCCCCACCACCAGATTTCACTTCCACAGCAGGCTTTATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCTCCTCCCCCGGCCGTaGTGGTTGTGGTTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRLLPRP*WLWLSL
Trigger: CAGGGACAACCACAACCACAACGGCCGGGGGAGGAG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTGTAGGGTAACAGCCTaGACCCCACCAAGGATGATG +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRCRVTA*TPPRMM
Trigger: CATCATCCTTGGTGGGGTCAAGGCTGTTACCCTACA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTGTAGGGTAACAGCCTaGACCCCACCAAGGATGATG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKCRVTA*TPPRMM
Trigger: CATCATCCTTGGTGGGGTCAAGGCTGTTACCCTACA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGGGTGTGGACAGCGTTaGGGCCCAGACCAGAACGGC +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRGCGQR*GPDQNG
Trigger: GCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACCC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAGATGCAGGGGATTGTaGACATCAAAGGTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKRCRGL*TSKVSG
Trigger: CCCGCTCACCTTTGATGTCAACAATCCCCTGCATCT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCAGAAACATGGATCTaGACGCCAGACTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSETWI*TPDLGV
Trigger: CACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCAGAAACATGGATCTaGACGCCAGACTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKSETWI*TPDLGV
Trigger: CACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTTTTCTGCCCGGAGGTaGGATGCAGCCACGATGAAA +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKFSARR*DAATMK
Trigger: TTTCATCGTGGCTGCATCCAACCTCCGGGCAGAAAA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATTAGGCTGCAGCCCTaGTACCTCAAAGCGATCCCA +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKIRLQP*YLKAIP
Trigger: TGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAACCGTTCCTTGAGCTaGGCAGCTGGCATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRNRSLS*AAGMKK
Trigger: CTTCTTCATGCCAGCTGCCAAGCTCAAGGAACGGTT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 90 bp ACATATGCCAGCTTCCGGATGAGGTCCTCGTCCAGGTTATTTTGCTaGACTGCTGGCAGGGCTCGAGCATTCACAGCCTGTGCTAAGGCT +
Preference number: 5 (lower is better)
Translates to: TYASFRMRSSSRLFC*TAGRARAFTACAKA
Trigger: AGCCTTAGCACAGGCTGTGAATGCTCGAGCCCTGCCAGCAGTGCAGCAAAATAACCTGGACGAGGACCTCATCCGGAAGCTGGCATATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS GCA 90 bp CCCAATGAAGGCGTTTATGGGTGCCAGATCCCCAGCAGCCACATATaGCAGCTTCCGGATGAGGTCCTCGTCCAGGTTATTTTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: PNEGVYGCQIPSSHI*QLPDEVLVQVILLH
Trigger: GTGCAGCAAAATAACCTGGACGAGGACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGGGATCTGGCACCCATAAACGCCTTCATTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS GCA 90 bp ACAGCGGCGAGCTGGACATTTTTGCGAATCATCAATGAACTCGTTTaGGCGGCAGACTTCAGAACGCCCCTTCAGCACGTCCCTTCGGCA +
Preference number: 5 (lower is better)
Translates to: TAASWTFLRIINELV*AADFRTPLQHVPSA
Trigger: TGCCGAAGGGACGTGCTGAAGGGGCGTTCTGAAGTCTGCCGCGCAAACGAGTTCATTGATGATTCGCAAAAATGTCCAGCTCGCCGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS CCA 90 bp TCTTCAGGGTACAGATGGGGATGGACTTCTCAGGTGGGTCCTGGCTaGAACTGTACGACTCTGTCAGGAAGGGGATCACCACCTGCACAT +
Preference number: 5 (lower is better)
Translates to: SSGYRWGWTSQVGPG*NCTTLSGRGSPPAH
Trigger: ATGTGCAGGTGGTGATCCCCTTCCTGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATCCCCATCTGTACCCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 90 bp AAGTTCTTCAGGGTACAGATGGGGATGGACTTCTCAGGTGGGTCCTaGCTGGAACTGTACGACTCTGTCAGGAAGGGGATCACCACCTGC +
Preference number: 5 (lower is better)
Translates to: KFFRVQMGMDFSGGS*LELYDSVRKGITTC
Trigger: GCAGGTGGTGATCCCCTTCCTGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATCCCCATCTGTACCCTGAAGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 90 bp TCATCAACAGAGGCATTGGCGCTCTGCAGCTCCTGGTCAGAAACATaGATCTTGACGCCAGACTTGGGGGTGAATTCGGGGACCTGCACA +
Preference number: 5 (lower is better)
Translates to: SSTEALALCSSWSET*ILTPDLGVNSGTCT
Trigger: TGTGCAGGTCCCCGAATTCACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRDTRRF*DSGELD
Trigger: GTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGAGTGGCTGCTCCCCATaGGAATCTGTGAGGATCATT +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKSGCSP*ESVRII
Trigger: AATGATCCTCACAGATTCCAATGGGGAGCAGCCACT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGAGTGGCTGCTCCCCATaGGAATCTGTGAGGATCATT +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSGCSP*ESVRII
Trigger: AATGATCCTCACAGATTCCAATGGGGAGCAGCCACT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTATCATGGCAAAGTTCTaGAGCAGCTCACAGCCAATG +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCIMAKF*SSSQPM
Trigger: CATTGGCTGTGAGCTGCTCAAGAACTTTGCCATGAT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTTTTCTGCTGGCTGCTaGAAGAGGCCTTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCFSAGC*KRPSNS
Trigger: TGAGTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAAA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCTGTGAGGTACTGGTaGACATTTTCTGCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKSVRYW*TFSAGC
Trigger: GCAGCCAGCAGAAAATGTCAACCAGTACCTCACAGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGTCCAGATGCAGGGGATaGTTGACATCAAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRSRCRG*LTSKVS
Trigger: GCTCACCTTTGATGTCAACAATCCCCTGCATCTGGA...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTTACATGTGGCCACAGTaGACAAAATGGGTTTCCGCA +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCYMWPQ*TKWVSA
Trigger: TGCGGAAACCCATTTTGTCAACTGTGGCCACATGTA...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS TCA 90 bp GTGCGGCAAGGGGTTCAGAGAAACCAAAGAAAGGCAGGGCCAAGTTaGGGAAACCATTCTTGTAGGAGTCAAGCTGTCGGTGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: VRQGVQRNQRKAGPS*GNHSCRSQAVGAPA
Trigger: TGCAGGGGCACCGACAGCTTGACTCCTACAAGAATGGTTTCCTCAACTTGGCCCTGCCTTTCTTTGGTTTCTCTGAACCCCTTGCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp CCCACACGGTTCTGGTGGCTTGTCACCCGGATATGTGGATTCATTTaGCGCACAGCTGCAGCAGCCGTGTCAGACTTTAACTTCGTGACA +
Preference number: 5 (lower is better)
Translates to: PTRFWWLVTRICGFI*RTAAAAVSDFNFVT
Trigger: TGTCACGAAGTTAAAGTCTGACACGGCTGCTGCAGCTGTGCGCCAAATGAATCCACATATCCGGGTGACAAGCCACCAGAACCGTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGACACCGGGGTTGTCCTaGGTAACCATAGAAACCATA +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGRTPGLS*VTIETI
Trigger: TATGGTTTCTATGGTTACCAAGGACAACCCCGGTGT...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGATCATGGCAAAGTTCTaGAGCAGCTCACAGCCAATG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKIMAKF*SSSQPM
Trigger: CATTGGCTGTGAGCTGCTCAAGAACTTTGCCATGAT...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGTCAATGGGGTACATCTaGAATCCAGGGAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKSMGYI*NPGSLS
Trigger: AGACAAGCTCCCTGGATTCAAGATGTACCCCATTGA...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp GACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGCCACAATGTCCACTCTaGGTTATAGTACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: DLASWATARSQMGTLGWKPQCPL*VIVLVT
Trigger: CGTCACCAGTACTATAACCAAGAGTGGACATTGTGG...CTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp ATTAGGGAAGTTCTTCAGGGTACAGATGGGGATGGACTTCTCAGGTaGGTCCTGGCTGGAACTGTACGACTCTGTCAGGAAGGGGATCAC +
Preference number: 5 (lower is better)
Translates to: IREVLQGTDGDGLLR*VLAGTVRLCQEGDH
Trigger: GTGATCCCCTTCCTGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATCCCCATCTGTACCCTGAAGAACTTCCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 90 bp TCTAGACGACTGTCATCAACAGAGGCATTGGCGCTCTGCAGCTCCTaGTCAGAAACATGGATCTTGACGCCAGACTTGGGGGTGAATTCG +
Preference number: 5 (lower is better)
Translates to: SRRLSSTEALALCSS*SETWILTPDLGVNS
Trigger: CGAATTCACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGACAGTCGTCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGCAGGGCGAGAAAACTaGGCGAAGTCCGTCACCACA +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRAGREN*AKSVTT
Trigger: TGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTGC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp GCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGGTGTACTGTCGATTCAGATTaGACTTCTCAATGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: ASWATARSQMGTLGWKGCTVDSD*TSQWCP
Trigger: TGGACACCATTGAGAAGTCAAATCTGAATCGACAGT...ACACCCCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAGCAGCTGCCGGATGTaGTTCGAGTACTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSSCRM*FEYWVC
Trigger: GCACACCCAGTACTCGAACAACATCCGGCAGCTGCT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGATCTTGACGCCAGACTaGGGGGTGAATTCGGGGACC +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRILTPD*GVNSGT
Trigger: GGTCCCCGAATTCACCCCCAAGTCTGGCGTCAAGAT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTCATCAACAGAGGCATaGGCGCTCTGCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSSTEA*ALCSSW
Trigger: CCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCTGGGCAGAGTGGCTTaGAGCTCCTCTAGACGACTG +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRLGRVA*SSSRRL
Trigger: CAGTCGTCTAGAGGAGCTCAAAGCCACTCTGCCCAG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTCTGGAGCCGCTTCATaGCCTCATGGCCCAACACAT +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRSGAAS*PHGPTH
Trigger: ATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAGA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCACGGTTCTGGTGGCTaGTCACCCGGATATGTGGAT +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRHGSGG*SPGYVD
Trigger: ATCCACATATCCGGGTGACAAGCCACCAGAACCGTG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGACGTTGTCCAGGGCATaGGCCACGCCATCTAGGTTT +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRTLSRA*ATPSRF
Trigger: AAACCTAGATGGCGTGGCCAATGCCCTGGACAACGT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGCAATCAGCTTGCTCTaGTGCCGGTCTGCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRAISLL*CRSAEG
Trigger: TCCTTCTGCAGACCGGCACAAGAGCAAGCTGATTGC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTCCCTGCAATCAGCTaGCTCTTGTGCCGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRFPAIS*LLCRSA
Trigger: TGCAGACCGGCACAAGAGCAAGCTGATTGCAGGGAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGATATGTGGATTCATTaGGCGCACAGCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRDMWIH*AHSCSS
Trigger: GCTGCTGCAGCTGTGCGCCAAATGAATCCACATATC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGAGATGCAGGGGATTGTaGACATCAAAGGTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRRCRGL*TSKVSG
Trigger: CCCGCTCACCTTTGATGTCAACAATCCCCTGCATCT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGATTAGGCTGCAGCCCTaGTACCTCAAAGCGATCCCA +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRIRLQP*YLKAIP
Trigger: TGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAAT...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 90 bp CCGGGGTTGTCCTTGGTAACCATAGAAACCATAGCACTGAGTGGCTaGTCCCCATTGGAATCTGTGAGGATCATTTCCTCTCCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PGLSLVTIETIALSG*SPLESVRIISSPKS
Trigger: TGACTTTGGAGAGGAAATGATCCTCACAGATTCCAATGGGGAGCAGCCACTCAGTGCTATGGTTTCTATGGTTACCAAGGACAACCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000442035.5
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGGTAACCACACCGGGGTaGTCCTTGGTAACCATAGAA +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRVTTPG*SLVTIE
Trigger: TTCTATGGTTACCAAGGACAACCCCGGTGTGGTTAC...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp ACTTGGCTAGTTGGGCCACTGCCAGAAGCCAAATGGGAACCCTGGGCTGGAAGGGAAAAATCAATGAAGTaGATTTGGGCAGTGGTTACA +
Preference number: 5 (lower is better)
Translates to: TWLVGPLPEAKWEPWAGREKSMK*IWAVVT
Trigger: TGTAACCACTGCCCAAATCAACTTCATTGATTTTTC...CCTTCCAGCCCAGGGTTCCCATTTGGCTTCTGGCAGTGGCCCAACTAGCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS TCA 90 bp CGAGCCCACTGCAGACAGAGCAAACAGATTACATGTGGCCACAGTTaGCAAAATGGGTTTCCGCAGGCATTATTAGAAGGACCATCAGTG +
Preference number: 5 (lower is better)
Translates to: RAHCRQSKQITCGHS*QNGFPQALLEGPSV
Trigger: CACTGATGGTCCTTCTAATAATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTCTGTCTGCAGTGGGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS GCA 90 bp CAGCTTGCTCTTGTGCCGGTCTGCAGAAGGAATGTCATAGTTTTCTaGCCGGAGGTTGGATGCAGCCACGATGAAATCCATATGAAAGTT +
Preference number: 5 (lower is better)
Translates to: QLALVPVCRRNVIVF*PEVGCSHDEIHMKV
Trigger: AACTTTCATATGGATTTCATCGTGGCTGCATCCAACCTCCGGGCAGAAAACTATGACATTCCTTCTGCAGACCGGCACAAGAGCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCTTCACTGCCGTTCTaGGCCATTCCGTTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSASLPF*AIPLVG
Trigger: GCCAACCAACGGAATGGCCAAGAACGGCAGTGAAGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGTTTTCTGCTGGCTGCTaGAAGAGGCCTTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRFSAGC*KRPSNS
Trigger: TGAGTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAAA...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAGCAGCTGCCGGATGTaGTTCGAGTACTGGGTGTGC +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSSCRM*FEYWVC
Trigger: GCACACCCAGTACTCGAACAACATCCGGCAGCTGCT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACTGGGCAGAGTGGCTTaGAGCTCCTCTAGACGACTG +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSLGRVA*SSSRRL
Trigger: CAGTCGTCTAGAGGAGCTCAAAGCCACTCTGCCCAG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp AGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGGTAGGCCACAATGTCCACTCTaGGTTATAGTACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: RIQVSNKVEGSGKRGSGRPQCPL*VIVLVT
Trigger: CGTCACCAGTACTATAACCAAGAGTGGACATTGTGG...CCTACCTGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp AAACTCATCCCGAGCCCACTGCAGACAGAGCAAACAGATTACATGTaGCCACAGTTGACAAAATGGGTTTCCGCAGGCATTATTAGAAGG +
Preference number: 5 (lower is better)
Translates to: KLIPSPLQTEQTDYM*PQLTKWVSAGIIRR
Trigger: CCTTCTAATAATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTCTGTCTGCAGTGGGCTCGGGATGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGCCAAACACAGCCACTaGCCCGTCATAACGGTTCTG +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSAKHSH*PVITVL
Trigger: CAGAACCGTTATGACGGGCAAGTGGCTGTGTTTGGC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATGCCCCTGCACAACCTaGTACAGCTCCAGACACACA +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSCPCTT*YSSRHT
Trigger: TGTGTGTCTGGAGCTGTACAAGGTTGTGCAGGGGCA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAGATATGTGGATTCATTaGGCGCACAGCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSDMWIH*AHSCSS
Trigger: GCTGCTGCAGCTGTGCGCCAAATGAATCCACATATC...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATTTTCTGCCCGGAGGTaGGATGCAGCCACGATGAAA +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSFSARR*DAATMK
Trigger: TTTCATCGTGGCTGCATCCAACCTCCGGGCAGAAAA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAATTAGGCTGCAGCCCTaGTACCTCAAAGCGATCCCA +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSIRLQP*YLKAIP
Trigger: TGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAAT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAAACCGTTCCTTGAGCTaGGCAGCTGGCATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSNRSLS*AAGMKK
Trigger: CTTCTTCATGCCAGCTGCCAAGCTCAAGGAACGGTT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCTGTGAGGTACTGGTaGACATTTTCTGCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSVRYW*TFSAGC
Trigger: GCAGCCAGCAGAAAATGTCAACCAGTACCTCACAGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCCAGATGCAGGGGATaGTTGACATCAAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSRCRG*LTSKVS
Trigger: GCTCACCTTTGATGTCAACAATCCCCTGCATCTGGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS TCA 90 bp GGGGTTATCGAGATGATAAATAACACAGAGCATAGAACCTTATTATaGATAATGAATAAAGGCCGGGTGGCGCCTCGTCAGCTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GVIEMINNTEHRTLL*IMNKGRVAPRQLRK
Trigger: CTTCCTGAGCTGACGAGGCGCCACCCGGCCTTTATTCATTATTCATAATAAGGTTCTATGCTCTGTGTTATTTATCATCTCGATAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427561.5
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAACACCGGGGTTGTCCTaGGTAACCATAGAAACCATA +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSTPGLS*VTIETI
Trigger: TATGGTTTCTATGGTTACCAAGGACAACCCCGGTGT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCATCAATGGGGTACATCTaGAATCCAGGGAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSSMGYI*NPGSLS
Trigger: AGACAAGCTCCCTGGATTCAAGATGTACCCCATTGA...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCACCACAATGTCCACTCTaGGTTATAGTACTGGTGACG +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSPQCPL*VIVLVT
Trigger: CGTCACCAGTACTATAACCAAGAGTGGACATTGTGG...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 90 bp GACTTTTATGACACTAAGTATCCCAATGTACCTAAGATTCCATCTTaGCACTTGTCACTAGCACCAACCACAATGACAAGAGCTCCCTAC +
Preference number: 5 (lower is better)
Translates to: DFYDTKYPNVPKIPS*HLSLAPTTMTRAPY
Trigger: GTAGGGAGCTCTTGTCATTGTGGTTGGTGCTAGTGACAAGTGCCAAGATGGAATCTTAGGTACATTGGGATACTTAGTGTCATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS-3UTR CAA 90 bp TTTATTAGGATTCAGGTTTCAAACAAGGTAGAAGGCAGTGGCAAGAGGGGTTCAACTGTCGATTCAGATTaGACTTCTCAATGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: FIRIQVSNKVEGSGKRGSTVDSD*TSQWCP
Trigger: TGGACACCATTGAGAAGTCAAATCTGAATCGACAGT...TGAACCCCTCTTGCCACTGCCTTCTACCTTGTTTGAAACCTGAATCCTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS GCA 90 bp AGAGGTTGCAAAAAGATAGAAAACAAACACATCCCAAGCCTCATCTaGATGCGGAGTCCCTTAAACAGGTTAACCACAATGATAAATGAG +
Preference number: 5 (lower is better)
Translates to: RGCKKIENKHIPSLI*MRSPLNRLTTMINE
Trigger: CTCATTTATCATTGTGGTTAACCTGTTTAAGGGACTCCGCATGCAGATGAGGCTTGGGATGTGTTTGTTTTCTATCTTTTTGCAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CCA 72 bp GTGGCAGGCCCAGGTCACGCAGTCAGCCCAGGTCTGTaGTCGCTGCAGCACCAGGCTGCGCTGCACAGCCTC +
Preference number: 6 (lower is better)
Translates to: VAGPGHAVSPGL*SLQHQAALHSL
Trigger: GAGGCTGTGCAGCGCAGCCTGGTGCTGCAGCGACCACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp CCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTTaGACAGCGGCGAGCTGGACATCCCCTGTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: PALDQARTRDVS*TAASWTSPVPG
Trigger: GCCCGGCACAGGGGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS CAA 72 bp TGCCGCCTTCTCCTCCCCCGGCCGTTGTGGTTGTGGTaGTCCCTGCCACCTCCTTACAGCCGAGCCGCCGAC +
Preference number: 6 (lower is better)
Translates to: CRLLLPRPLWLW*SLPPPYSRAAD
Trigger: GTCGGCGGCTCGGCTGTAAGGAGGTGGCAGGGACAACCACAACCACAACGGCCGGGGGAGGAGAAGGCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000442035.5
CDS CAA 72 bp CCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATCCCCTGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: PGFGSGPDTRRF*DSGELDIPCAG
Trigger: CCCGGCACAGGGGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS CAA 72 bp CCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATCTTCCCCACGGGG +
Preference number: 6 (lower is better)
Translates to: PGFGSGPDTRRF*DSGELDIFPTG
Trigger: CCCCGTGGGGAAGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS TCA 72 bp TCCTCCTCATTGCGGGGCCGAGGTGGCCGGCCATGCTaGGCACAGAACTGGTGCAGGGCCTGGAAGCCAATG +
Preference number: 6 (lower is better)
Translates to: SSSLRGRGGRPC*AQNWCRAWKPM
Trigger: CATTGGCTTCCAGGCCCTGCACCAGTTCTGTGCTCAGCATGGCCGGCCACCTCGGCCCCGCAATGAGGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CCA 72 bp AATCGCCGCTGCCGCCTTCTCCTCCCCCGGCCGTTGTaGTTGTGGTTGTCCCTGCCACCTCCTTACAGCCGA +
Preference number: 6 (lower is better)
Translates to: NRRCRLLLPRPL*LWLSLPPPYSR
Trigger: TCGGCTGTAAGGAGGTGGCAGGGACAACCACAACCACAACGGCCGGGGGAGGAGAAGGCGGCAGCGGCGATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000442035.5
ENST00000457753.5
CDS CCA 72 bp CCACGCCCAGGCCCCGCAGGCCTGATACCAGGACACTaGATGTCTGGAGCCGCTTCATTGCCTCATGGCCCA +
Preference number: 6 (lower is better)
Translates to: PRPGPAGLIPGH*MSGAASLPHGP
Trigger: TGGGCCATGAGGCAATGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAGGCCTGCGGGGCCTGGGCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp CAGTTCTGCTGCATCCTCCTCATTGCGGGGCCGAGGTaGCCGGCCATGCTGAGCACAGAACTGGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QFCCILLIAGPR*PAMLSTELVQG
Trigger: GCCCTGCACCAGTTCTGTGCTCAGCATGGCCGGCCACCTCGGCCCCGCAATGAGGAGGATGCAGCAGAACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CCA 72 bp CCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTTaGACAGCGGCGAGCTGGACATCTTCCCCACGGGGT +
Preference number: 6 (lower is better)
Translates to: PALDQARTRDVS*TAASWTSSPRG
Trigger: ACCCCGTGGGGAAGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CAA 90 bp CAGTTAGAACCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATCCCCTGTGCCGGGCGGAAGCCT +
Preference number: 6 (lower is better)
Translates to: QLEPGFGSGPDTRRF*DSGELDIPCAGRKP
Trigger: AGGCTTCCGCCCGGCACAGGGGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS TCA 72 bp CCTCCCCGCAGCCCAGCCCAATCATGGCAAAGTTCTTaGGCAGCTCACAGCCAATGGCCCCCGCACCCACCA +
Preference number: 6 (lower is better)
Translates to: PPRSPAQSWQSS*AAHSQWPPHPP
Trigger: TGGTGGGTGCGGGGGCCATTGGCTGTGAGCTGCTCAAGAACTTTGCCATGATTGGGCTGGGCTGCGGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS GCA 72 bp TGCAGCAGCTGCCGGATGTTGTTCGAGTACTGGGTGTaGCAGTGGTGGCAGGCCCAGGTCACGCAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: CSSCRMLFEYWV*QWWQAQVTQSA
Trigger: GGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp CCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTTaGACAGCGGCGAGCTGGACATCAATGCCGGTTCCC +
Preference number: 6 (lower is better)
Translates to: PALDQARTRDVS*TAASWTSMPVP
Trigger: GGGAACCGGCATTGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS CCA 72 bp AGCTGCCGGATGTTGTTCGAGTACTGGGTGTGCCAGTaGTGGCAGGCCCAGGTCACGCAGTCAGCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: SCRMLFEYWVCQ*WQAQVTQSAQV
Trigger: GACCTGGGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp TCGTTACAGCACAGCTCAAGCACCAGCGCCCGCACGTaGCGGCCCAGCTTTCGCTTCGACACACGGCTCACA +
Preference number: 6 (lower is better)
Translates to: SLQHSSSTSART*RPSFRFDTRLT
Trigger: TGTGAGCCGTGTGTCGAAGCGAAAGCTGGGCCGCCACGTGCGGGCGCTGGTGCTTGAGCTGTGCTGTAACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp AGCCTGAGCTGGGAGGCTCCTCTCCCTAGAAACATCTaGGCCCCCGACGTGTCCAGTCTCGCAGTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SLSWEAPLPRNI*APDVSSLAVLS
Trigger: GCTCAGGACTGCGAGACTGGACACGTCGGGGGCCCAGATGTTTCTAGGGAGAGGAGCCTCCCAGCTCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS CAA 72 bp CCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATCAATGCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: PGFGSGPDTRRF*DSGELDINAGS
Trigger: GGAACCGGCATTGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS CAA 90 bp CAGTTAGAACCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATCAATGCCGGTTCCCCGGGTCGC +
Preference number: 6 (lower is better)
Translates to: QLEPGFGSGPDTRRF*DSGELDINAGSPGR
Trigger: GCGACCCGGGGAACCGGCATTGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335972.11
CDS TCA 72 bp GCCCAAACAGGCCCCGCGTGTCTGCCACCACCAGCTTaGTGCCACGGTTGTGACAGAACTCACCCACTCGCA +
Preference number: 6 (lower is better)
Translates to: AQTGPACLPPPA*CHGCDRTHPLA
Trigger: TGCGAGTGGGTGAGTTCTGTCACAACCGTGGCATCAAGCTGGTGGTGGCAGACACGCGGGGCCTGTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000442035.5
CDS TCA 72 bp CTGTGCCGGGCGGAAGCCTCGCCTTCCTGCCAAAGATaGGCTGAAGCCACGGGGCAACGGAAGAGCAAACCA +
Preference number: 6 (lower is better)
Translates to: LCRAEASPSCQR*AEATGQRKSKP
Trigger: TGGTTTGCTCTTCCGTTGCCCCGTGGCTTCAGCTCATCTTTGGCAGGAAGGCGAGGCTTCCGCCCGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377351.8
CDS CCA 72 bp CACGGACTGGGCAGGGGAGCAGTTAGAACCCGGCTTTaGATCAGGCCCGGACACGCGACGTTTCTTGGACAG +
Preference number: 6 (lower is better)
Translates to: HGLGRGAVRTRL*IRPGHATFLGQ
Trigger: CTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAACTGCTCCCCTGCCCAGTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp TGCCGGATGTTGTTCGAGTACTGGGTGTGCCAGTGGTaGCAGGCCCAGGTCACGCAGTCAGCCCAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: CRMLFEYWVCQW*QAQVTQSAQVC
Trigger: ACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp AGGGGCCAGCCTAGAGGAGCAGACGGGGTCAGCGGATaGTGTATCGGACATAGGGAACCTCGACATCCTCGC +
Preference number: 6 (lower is better)
Translates to: RGQPRGADGVSG*CIGHREPRHPR
Trigger: GCGAGGATGTCGAGGTTCCCTATGTCCGATACACCATCCGCTGACCCCGTCTGCTCCTCTAGGCTGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp AAGTTGTGCAGCAGCTGCCGGATGTTGTTCGAGTACTaGGTGTGCCAGTGGTGGCAGGCCCAGGTCACGCAG +
Preference number: 6 (lower is better)
Translates to: KLCSSCRMLFEY*VCQWWQAQVTQ
Trigger: CTGCGTGACCTGGGCCTGCCACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCACAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 90 bp TGCAGGGCCTGGAAGCCAATGTGCAGCTGGGCAGGGCGAGAAAACTaGGCGAAGTCCGTCACCACAAAGTCAGGTTCTGCCAGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: CRAWKPMCSWAGREN*AKSVTTKSGSASEA
Trigger: GGCCTCACTGGCAGAACCTGACTTTGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTGCCCAGCTGCACATTGGCTTCCAGGCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CAA 90 bp CAGTTAGAACCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATCTTCCCCACGGGGTTATCGAGA +
Preference number: 6 (lower is better)
Translates to: QLEPGFGSGPDTRRF*DSGELDIFPTGLSR
Trigger: TCTCGATAACCCCGTGGGGAAGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGGTTCTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS TCA 72 bp AGGCACATAGCTGTTGAGCTCAGCGAGGCGGGGCTGTaGTACCTCGGCCCGGTTTTTACCGATGTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: RHIAVELSEAGL*YLGPVFTDVLL
Trigger: GAGGAGGACATCGGTAAAAACCGGGCCGAGGTATCACAGCCCCGCCTCGCTGAGCTCAACAGCTATGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp TTGGTTGGCACCGAGGGCACTTCGGACAACACGGACTaGGCAGGGGAGCAGTTAGAACCCGGCTTTGGATCA +
Preference number: 6 (lower is better)
Translates to: LVGTEGTSDNTD*AGEQLEPGFGS
Trigger: TGATCCAAAGCCGGGTTCTAACTGCTCCCCTGCCCAGTCCGTGTTGTCCGAAGTGCCCTCGGTGCCAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp AGGCCCCGCAGGCCTGATACCAGGACACTGGATGTCTaGAGCCGCTTCATTGCCTCATGGCCCAACACATAC +
Preference number: 6 (lower is better)
Translates to: RPRRPDTRTLDV*SRFIASWPNTY
Trigger: GTATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAGGCCTGCGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp ATGCAGGGGATTGTTGACATCAAAGGTGAGCGGGTGTaGACAGCGTTTGGGCCCAGACCAGAACGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: MQGIVDIKGERV*TAFGPRPERRS
Trigger: GGAGCGCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACCCGCTCACCTTTGATGTCAACAATCCCCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 90 bp TGCAGGGGATTGTTGACATCAAAGGTGAGCGGGTGTGGACAGCGTTaGGGCCCAGACCAGAACGGCGCTCCTGAGCTTGTGAGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: CRGLLTSKVSGCGQR*GPDQNGAPELVSWS
Trigger: TGACCAGCTCACAAGCTCAGGAGCGCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACCCGCTCACCTTTGATGTCAACAATCCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 90 bp GCGCTCTGCAGCTCCTGGTCAGAAACATGGATCTTGACGCCAGACTaGGGGGTGAATTCGGGGACCTGCACAGACTGCAGGAATGTGGCC +
Preference number: 6 (lower is better)
Translates to: ALCSSWSETWILTPD*GVNSGTCTDCRNVA
Trigger: GGCCACATTCCTGCAGTCTGTGCAGGTCCCCGAATTCACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 90 bp AGATCAGCCCACTGGGCAGTGCCCTGGTCATGTAGGGTAACAGCCTaGACCCCACCAAGGATGATGTTCTTAGCGATCTCCACGCCCAGG +
Preference number: 6 (lower is better)
Translates to: RSAHWAVPWSCRVTA*TPPRMMFLAISTPR
Trigger: CCTGGGCGTGGAGATCGCTAAGAACATCATCCTTGGTGGGGTCAAGGCTGTTACCCTACATGACCAGGGCACTGCCCAGTGGGCTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CAA 90 bp ACAGAGGCATTGGCGCTCTGCAGCTCCTGGTCAGAAACATGGATCTaGACGCCAGACTTGGGGGTGAATTCGGGGACCTGCACAGACTGC +
Preference number: 6 (lower is better)
Translates to: TEALALCSSWSETWI*TPDLGVNSGTCTDC
Trigger: GCAGTCTGTGCAGGTCCCCGAATTCACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS TCA 72 bp TCAGCACGTCCCTTCGGCACGCTGATCCGCCCCTCGTaGATAATTCACAAGCCGAGAACCTTCAGCGGACCA +
Preference number: 6 (lower is better)
Translates to: SARPFGTLIRPS*IIHKPRTFSGP
Trigger: TGGTCCGCTGAAGGTTCTCGGCTTGTGAATTATTCACGAGGGGCGGATCAGCGTGCCGAAGGGACGTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS GCA 72 bp CTTGTGAGCTGGTCAGGAGGGAAGTTGTGCAGCAGCTaGCGGATGTTGTTCGAGTACTGGGTGTGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: LVSWSGGKLCSS*RMLFEYWVCQW
Trigger: CCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCTGCTGCACAACTTCCCTCCTGACCAGCTCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp AACTGGGAGGAAAGATCAGCCCACTGGGCAGTGCCCTaGTCATGTAGGGTAACAGCCTTGACCCCACCAAGG +
Preference number: 6 (lower is better)
Translates to: NWEERSAHWAVP*SCRVTALTPPR
Trigger: CCTTGGTGGGGTCAAGGCTGTTACCCTACATGACCAGGGCACTGCCCAGTGGGCTGATCTTTCCTCCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp ACCCACACGGTTCTGGTGGCTTGTCACCCGGATATGTaGATTCATTTGGCGCACAGCTGCAGCAGCCGTGTC +
Preference number: 6 (lower is better)
Translates to: THTVLVACHPDM*IHLAHSCSSRV
Trigger: GACACGGCTGCTGCAGCTGTGCGCCAAATGAATCCACATATCCGGGTGACAAGCCACCAGAACCGTGTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CCA 72 bp CCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTTaGACAGCGGCGAGCTGGACATTTTTGCGAATCATC +
Preference number: 6 (lower is better)
Translates to: PALDQARTRDVS*TAASWTFLRII
Trigger: GATGATTCGCAAAAATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS CCA 72 bp GCCCGGACACGCGACGTTTCTTGGACAGCGGCGAGCTaGACATCTTCCCCACGGGGTTATCGAGATGATAAA +
Preference number: 6 (lower is better)
Translates to: ARTRDVSWTAAS*TSSPRGYRDDK
Trigger: TTTATCATCTCGATAACCCCGTGGGGAAGATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp TGCAGGAGGGAAGTGAGGCTTGGACATCCATCAGGGTaGCATGATGGCAGGAGCGGTAACTTGCAATGCCGG +
Preference number: 6 (lower is better)
Translates to: CRREVRLGHPSG*HDGRSGNLQCR
Trigger: CCGGCATTGCAAGTTACCGCTCCTGCCATCATGCCACCCTGATGGATGTCCAAGCCTCACTTCCCTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457753.5
CDS CAA 72 bp TGCGCTCCGTGTCAGGACCCACACGGTTCTGGTGGCTaGTCACCCGGATATGTGGATTCATTTGGCGCACAG +
Preference number: 6 (lower is better)
Translates to: CAPCQDPHGSGG*SPGYVDSFGAQ
Trigger: CTGTGCGCCAAATGAATCCACATATCCGGGTGACAAGCCACCAGAACCGTGTGGGTCCTGACACGGAGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CAA 72 bp TTGTTGACATCAAAGGTGAGCGGGTGTGGACAGCGTTaGGGCCCAGACCAGAACGGCGCTCCTGAGCTTGTG +
Preference number: 6 (lower is better)
Translates to: LLTSKVSGCGQR*GPDQNGAPELV
Trigger: CACAAGCTCAGGAGCGCCGTTCTGGTCTGGGCCCAAACGCTGTCCACACCCGCTCACCTTTGATGTCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 72 bp CCCGGCTTTGGATCAGGCCCGGACACGCGACGTTTCTaGGACAGCGGCGAGCTGGACATTTTTGCGAATCAT +
Preference number: 6 (lower is better)
Translates to: PGFGSGPDTRRF*DSGELDIFANH
Trigger: ATGATTCGCAAAAATGTCCAGCTCGCCGCTGTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS CAA 90 bp CATCATAGATGCGCTCCGTGTCAGGACCCACACGGTTCTGGTGGCTaGTCACCCGGATATGTGGATTCATTTGGCGCACAGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: HHRCAPCQDPHGSGG*SPGYVDSFGAQLQQ
Trigger: CTGCTGCAGCTGTGCGCCAAATGAATCCACATATCCGGGTGACAAGCCACCAGAACCGTGTGGGTCCTGACACGGAGCGCATCTATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS TCA 72 bp CCAGATCCCCAGCAGCCACATATGCCAGCTTCCGGATaGGGTCCTCGTCCAGGTTATTTTGCTGCACTGCTG +
Preference number: 6 (lower is better)
Translates to: PDPQQPHMPASG*GPRPGYFAALL
Trigger: CAGCAGTGCAGCAAAATAACCTGGACGAGGACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGGGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS TCA 72 bp ACTCAGGGACGTTCGGTGACCAAGGTTCCCACACACTaGGCTGGGACCAGACCAGGATCTGCTGACTCTGAA +
Preference number: 6 (lower is better)
Translates to: TQGRSVTKVPTH*AGTRPGSADSE
Trigger: TTCAGAGTCAGCAGATCCTGGTCTGGTCCCAGCTCAGTGTGTGGGAACCTTGGTCACCGAACGTCCCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS GCA 72 bp AGCTTCCGGATGAGGTCCTCGTCCAGGTTATTTTGCTaGACTGCTGGCAGGGCTCGAGCATTCACAGCCTGT +
Preference number: 6 (lower is better)
Translates to: SFRMRSSSRLFC*TAGRARAFTAC
Trigger: ACAGGCTGTGAATGCTCGAGCCCTGCCAGCAGTGCAGCAAAATAACCTGGACGAGGACCTCATCCGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS GCA 72 bp GGCGTTTATGGGTGCCAGATCCCCAGCAGCCACATATaGCAGCTTCCGGATGAGGTCCTCGTCCAGGTTATT +
Preference number: 6 (lower is better)
Translates to: GVYGCQIPSSHI*QLPDEVLVQVI
Trigger: AATAACCTGGACGAGGACCTCATCCGGAAGCTGGCATATGTGGCTGCTGGGGATCTGGCACCCATAAACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS GCA 72 bp CAATGGCCCCCGCACCCACCAGGAAATACTTCTGCTTaGCCAGCTTCTCTTGCAGGTCTGAGCCAAACACAG +
Preference number: 6 (lower is better)
Translates to: QWPPHPPGNTSA*PASLAGLSQTQ
Trigger: CTGTGTTTGGCTCAGACCTGCAAGAGAAGCTGGGCAAGCAGAAGTATTTCCTGGTGGGTGCGGGGGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 72 bp GGAAGCCAATGTGCAGCTGGGCAGGGCGAGAAAACTTaGCGAAGTCCGTCACCACAAAGTCAGGTTCTGCCA +
Preference number: 6 (lower is better)
Translates to: GSQCAAGQGEKT*RSPSPQSQVLP
Trigger: TGGCAGAACCTGACTTTGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTGCCCAGCTGCACATTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CCA 72 bp AGGGTACAGATGGGGATGGACTTCTCAGGTGGGTCCTaGCTGGAACTGTACGACTCTGTCAGGAAGGGGATC +
Preference number: 6 (lower is better)
Translates to: RVQMGMDFSGGS*LELYDSVRKGI
Trigger: GATCCCCTTCCTGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATCCCCATCTGTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 72 bp TGCAGGAGGGAAGTGAGGCTTGGACATCCATCAGGGTaGCATGATGGCAGGAGCGGTAACTTGCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: CRREVRLGHPSG*HDGRSGNLLRT
Trigger: GGTTCTCAGCAAGTTACCGCTCCTGCCATCATGCCACCCTGATGGATGTCCAAGCCTCACTTCCCTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CAA 72 bp CTGATACCAGGACACTGGATGTCTGGAGCCGCTTCATaGCCTCATGGCCCAACACATACAGCTGCCGGGAGT +
Preference number: 6 (lower is better)
Translates to: LIPGHWMSGAAS*PHGPTHTAAGS
Trigger: ACTCCCGGCAGCTGTATGTGTTGGGCCATGAGGCAATGAAGCGGCTCCAGACATCCAGTGTCCTGGTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CAA 72 bp TGGAAGCCAATGTGCAGCTGGGCAGGGCGAGAAAACTaGGCGAAGTCCGTCACCACAAAGTCAGGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: WKPMCSWAGREN*AKSVTTKSGSA
Trigger: GGCAGAACCTGACTTTGTGGTGACGGACTTCGCCAAGTTTTCTCGCCCTGCCCAGCTGCACATTGGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CAA 72 bp AGCTCCTGGTCAGAAACATGGATCTTGACGCCAGACTaGGGGGTGAATTCGGGGACCTGCACAGACTGCAGG +
Preference number: 6 (lower is better)
Translates to: SSWSETWILTPD*GVNSGTCTDCR
Trigger: CCTGCAGTCTGTGCAGGTCCCCGAATTCACCCCCAAGTCTGGCGTCAAGATCCATGTTTCTGACCAGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 72 bp ATACAGCTGCCGGGAGTAAAGGCCCTCGTCTATGTCTaGTTCACTGCCGTTCTTGGCCATTCCGTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: IQLPGVKALVYV*FTAVLGHSVGW
Trigger: CCAACCAACGGAATGGCCAAGAACGGCAGTGAAGCAGACATAGACGAGGGCCTTTACTCCCGGCAGCTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CCA 72 bp TACAGATGGGGATGGACTTCTCAGGTGGGTCCTGGCTaGAACTGTACGACTCTGTCAGGAAGGGGATCACCA +
Preference number: 6 (lower is better)
Translates to: YRWGWTSQVGPG*NCTTLSGRGSP
Trigger: TGGTGATCCCCTTCCTGACAGAGTCGTACAGTTCCAGCCAGGACCCACCTGAGAAGTCCATCCCCATCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000490869.1
CDS CCA 72 bp CTGTCATCAACAGAGGCATTGGCGCTCTGCAGCTCCTaGTCAGAAACATGGATCTTGACGCCAGACTTGGGG +
Preference number: 6 (lower is better)
Translates to: LSSTEALALCSS*SETWILTPDLG
Trigger: CCCCAAGTCTGGCGTCAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 72 bp CACTGGGCAGTGCCCTGGTCATGTAGGGTAACAGCCTaGACCCCACCAAGGATGATGTTCTTAGCGATCTCC +
Preference number: 6 (lower is better)
Translates to: HWAVPWSCRVTA*TPPRMMFLAIS
Trigger: GGAGATCGCTAAGAACATCATCCTTGGTGGGGTCAAGGCTGTTACCCTACATGACCAGGGCACTGCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000427561.5
ENST00000442035.5
ENST00000451702.2
ENST00000457753.5
CDS CAA 72 bp AATCCAGGGAGCTTGTCTGGGCTGGGCAGAGTGGCTTaGAGCTCCTCTAGACGACTGTCATCAACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: NPGSLSGLGRVA*SSSRRLSSTEA
Trigger: TGCCTCTGTTGATGACAGTCGTCTAGAGGAGCTCAAAGCCACTCTGCCCAGCCCAGACAAGCTCCCTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS TCA 72 bp GACAGCGGCGAGCTGGACATTTTTGCGAATCATCAATaGACTCGTTTGCGCGGCAGACTTCAGAACGCCCCT +
Preference number: 6 (lower is better)
Translates to: DSGELDIFANHQ*TRLRGRLQNAP
Trigger: AGGGGCGTTCTGAAGTCTGCCGCGCAAACGAGTTCATTGATGATTCGCAAAAATGTCCAGCTCGCCGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS TCA 72 bp CCAGCAAGGCAGAGTTTAGTGTCCTTGCCGGACAAATaGGAAGTAACTTGCCCAGGGTCACCTGCTAGGTCC +
Preference number: 6 (lower is better)
Translates to: PARQSLVSLPDK*EVTCPGSPARS
Trigger: GGACCTAGCAGGTGACCCTGGGCAAGTTACTTCTCATTTGTCCGGCAAGGACACTAAACTCTGCCTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CAA 72 bp CCCTTGTACCTCAAAGCGATCCCACAATGTCCACTCTaGGTTATAGTACTGGTGACGTGGTGCGGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: PLYLKAIPQCPL*VIVLVTWCGKG
Trigger: CCCCTTGCCGCACCACGTCACCAGTACTATAACCAAGAGTGGACATTGTGGGATCGCTTTGAGGTACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 72 bp TCTAGACGACTGTCATCAACAGAGGCATTGGCGCTCTaGAGCTCCTGGTCAGAAACATGGATCTTGACGCCA +
Preference number: 6 (lower is better)
Translates to: SRRLSSTEALAL*SSWSETWILTP
Trigger: TGGCGTCAAGATCCATGTTTCTGACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGATGACAGTCGTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CCA 72 bp TTCTGGTGGCTTGTCACCCGGATATGTGGATTCATTTaGCGCACAGCTGCAGCAGCCGTGTCAGACTTTAAC +
Preference number: 6 (lower is better)
Translates to: FWWLVTRICGFI*RTAAAAVSDFN
Trigger: GTTAAAGTCTGACACGGCTGCTGCAGCTGTGCGCCAAATGAATCCACATATCCGGGTGACAAGCCACCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CCA 72 bp CTTGGGGTCTGTGAGGTACTGGTTGACATTTTCTGCTaGCTGCTTGAAGAGGCCTTCAAACTCATCCCGAGC +
Preference number: 6 (lower is better)
Translates to: LGVCEVLVDIFC*LLEEAFKLIPS
Trigger: GCTCGGGATGAGTTTGAAGGCCTCTTCAAGCAGCCAGCAGAAAATGTCAACCAGTACCTCACAGACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 72 bp CTTGTGCCGGTCTGCAGAAGGAATGTCATAGTTTTCTaGCCGGAGGTTGGATGCAGCCACGATGAAATCCAT +
Preference number: 6 (lower is better)
Translates to: LVPVCRRNVIVF*PEVGCSHDEIH
Trigger: ATGGATTTCATCGTGGCTGCATCCAACCTCCGGGCAGAAAACTATGACATTCCTTCTGCAGACCGGCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 72 bp AGGAACTGTTTGAGGGTCATCTCCTCACCATTAGGCTaGAGCCCTTGTACCTCAAAGCGATCCCACAATGTC +
Preference number: 6 (lower is better)
Translates to: RNCLRVISSPLG*SPCTSKRSHNV
Trigger: GACATTGTGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAATGGTGAGGAGATGACCCTCAAACAGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS GCA 72 bp AGCTGGACATTTTTGCGAATCATCAATGAACTCGTTTaGGCGGCAGACTTCAGAACGCCCCTTCAGCACGTC +
Preference number: 6 (lower is better)
Translates to: SWTFLRIINELV*AADFRTPLQHV
Trigger: GACGTGCTGAAGGGGCGTTCTGAAGTCTGCCGCGCAAACGAGTTCATTGATGATTCGCAAAAATGTCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412206.5
CDS CCA 72 bp CCGAGCCCACTGCAGACAGAGCAAACAGATTACATGTaGCCACAGTTGACAAAATGGGTTTCCGCAGGCATT +
Preference number: 6 (lower is better)
Translates to: PSPLQTEQTDYM*PQLTKWVSAGI
Trigger: AATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTCTGTCTGCAGTGGGCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS CAA 72 bp TTTGAGGGTCATCTCCTCACCATTAGGCTGCAGCCCTaGTACCTCAAAGCGATCCCACAATGTCCACTCTTG +
Preference number: 6 (lower is better)
Translates to: FEGHLLTIRLQP*YLKAIPQCPLL
Trigger: CAAGAGTGGACATTGTGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAATGGTGAGGAGATGACCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS TCA 72 bp GGCGAAGTCCGTCACCACAAAGTCAGGTTCTGCCAGTaGGGCCACCAAGGATTTAAAGCTAATCTTCTTAGG +
Preference number: 6 (lower is better)
Translates to: GEVRHHKVRFCQ*GHQGFKANLLR
Trigger: CCTAAGAAGATTAGCTTTAAATCCTTGGTGGCCTCACTGGCAGAACCTGACTTTGTGGTGACGGACTTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335972.11
ENST00000377351.8
CDS CAA 90 bp GAGGAACTGTTTGAGGGTCATCTCCTCACCATTAGGCTGCAGCCCTaGTACCTCAAAGCGATCCCACAATGTCCACTCTTGGTTATAGTA +
Preference number: 6 (lower is better)
Translates to: EELFEGHLLTIRLQP*YLKAIPQCPLLVIV
Trigger: TACTATAACCAAGAGTGGACATTGTGGGATCGCTTTGAGGTACAAGGGCTGCAGCCTAATGGTGAGGAGATGACCCTCAAACAGTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335972.11
ENST00000377269.3
ENST00000377351.8
CDS CAA 90 bp CCGAGCCCACTGCAGACAGAGCAAACAGATTACATGTGGCCACAGTaGACAAAATGGGTTTCCGCAGGCATTATTAGAAGGACCATCAGT +
Preference number: 6 (lower is better)
Translates to: PSPLQTEQTDYMWPQ*TKWVSAGIIRRTIS
Trigger: ACTGATGGTCCTTCTAATAATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTCTGTCTGCAGTGGGCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS CCA 72 bp CGTCTCACTCTGTCCTCAGGGTACTCCTGTGGGGTTTaGACTGCTATCAATAATACCCCCAACTTTAAAGTG +
Preference number: 6 (lower is better)
Translates to: RLTLSSGYSCGV*TAINNTPNFKV
Trigger: CACTTTAAAGTTGGGGGTATTATTGATAGCAGTCCAAACCCCACAGGAGTACCCTGAGGACAGAGTGAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CAA 90 bp TCCTTGGTAACCATAGAAACCATAGCACTGAGTGGCTGCTCCCCATaGGAATCTGTGAGGATCATTTCCTCTCCAAAGTCACAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SLVTIETIALSGCSP*ESVRIISSPKSQKS
Trigger: GCTCTTCTGTGACTTTGGAGAGGAAATGATCCTCACAGATTCCAATGGGGAGCAGCCACTCAGTGCTATGGTTTCTATGGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000442035.5
CDS GCA 72 bp TCCTTGGTAACCATAGAAACCATAGCACTGAGTGGCTaGTCCCCATTGGAATCTGTGAGGATCATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: SLVTIETIALSG*SPLESVRIISS
Trigger: AGAGGAAATGATCCTCACAGATTCCAATGGGGAGCAGCCACTCAGTGCTATGGTTTCTATGGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335972.11
ENST00000377351.8
ENST00000412206.5
ENST00000442035.5
CDS CAA 72 bp CTGCAGACAGAGCAAACAGATTACATGTGGCCACAGTaGACAAAATGGGTTTCCGCAGGCATTATTAGAAGG +
Preference number: 6 (lower is better)
Translates to: LQTEQTDYMWPQ*TKWVSAGIIRR
Trigger: CCTTCTAATAATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTCTGTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS TCA 72 bp TGCAGACAGAGCAAACAGATTACATGTGGCCACAGTTaGCAAAATGGGTTTCCGCAGGCATTATTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: CRQSKQITCGHS*QNGFPQALLEG
Trigger: TCCTTCTAATAATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTCTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS TCA 72 bp GCACTGAGTCTTCTGTTCACACAAGTCCTCCCACACTaGGACTTTTATGACACTAAGTATCCCAATGTACCT +
Preference number: 6 (lower is better)
Translates to: ALSLLFTQVLPH*DFYDTKYPNVP
Trigger: AGGTACATTGGGATACTTAGTGTCATAAAAGTCTCAGTGTGGGAGGACTTGTGTGAACAGAAGACTCAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CCA 72 bp GAGCAAACAGATTACATGTGGCCACAGTTGACAAAATaGGTTTCCGCAGGCATTATTAGAAGGACCATCAGT +
Preference number: 6 (lower is better)
Translates to: EQTDYMWPQLTK*VSAGIIRRTIS
Trigger: ACTGATGGTCCTTCTAATAATGCCTGCGGAAACCCATTTTGTCAACTGTGGCCACATGTAATCTGTTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377269.3
CDS CCA 72 bp GACACTAAGTATCCCAATGTACCTAAGATTCCATCTTaGCACTTGTCACTAGCACCAACCACAATGACAAGA +
Preference number: 6 (lower is better)
Translates to: DTKYPNVPKIPS*HLSLAPTTMTR
Trigger: TCTTGTCATTGTGGTTGGTGCTAGTGACAAGTGCCAAGATGGAATCTTAGGTACATTGGGATACTTAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CAA 90 bp TATGACACTAAGTATCCCAATGTACCTAAGATTCCATCTTGGCACTaGTCACTAGCACCAACCACAATGACAAGAGCTCCCTACTATCTA +
Preference number: 6 (lower is better)
Translates to: YDTKYPNVPKIPSWH*SLAPTTMTRAPYYL
Trigger: TAGATAGTAGGGAGCTCTTGTCATTGTGGTTGGTGCTAGTGACAAGTGCCAAGATGGAATCTTAGGTACATTGGGATACTTAGTGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS TCA 72 bp GAGATGATAAATAACACAGAGCATAGAACCTTATTATaGATAATGAATAAAGGCCGGGTGGCGCCTCGTCAG +
Preference number: 6 (lower is better)
Translates to: EMINNTEHRTLL*IMNKGRVAPRQ
Trigger: CTGACGAGGCGCCACCCGGCCTTTATTCATTATTCATAATAAGGTTCTATGCTCTGTGTTATTTATCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427561.5
CDS GCA 72 bp CTAATCTTAACAATCCCCATGACCCAGATAACCCTATaGCCAAATCACAAATGGGAAAAGAAAGGCTTAGAG +
Preference number: 6 (lower is better)
Translates to: LILTIPMTQITL*PNHKWEKKGLE
Trigger: CTCTAAGCCTTTCTTTTCCCATTTGTGATTTGGGCATAGGGTTATCTGGGTCATGGGGATTGTTAAGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS GCA 72 bp AAAAAGATAGAAAACAAACACATCCCAAGCCTCATCTaGATGCGGAGTCCCTTAAACAGGTTAACCACAATG +
Preference number: 6 (lower is better)
Translates to: KKIENKHIPSLI*MRSPLNRLTTM
Trigger: CATTGTGGTTAACCTGTTTAAGGGACTCCGCATGCAGATGAGGCTTGGGATGTGTTTGTTTTCTATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451702.2
CDS CAA 72 bp AGAGCATACTGTGTGTCAATCAAAGAGGAAAGGGCTTaGTCTAATCTTAACAATCCCCATGACCCAGATAAC +
Preference number: 6 (lower is better)
Translates to: RAYCVSIKEERA*SNLNNPHDPDN
Trigger: GTTATCTGGGTCATGGGGATTGTTAAGATTAGACAAAGCCCTTTCCTCTTTGATTGACACACAGTATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451702.2