RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UAP1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197355

Ensembl transcript IDs: ENST00000360271.3, ENST00000409858.8, ENST00000474787.1, ENST00000476184.5

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAAGGCGGGCTCCCAAAGGGACATGCCCTCCTGTTCTCCCCAGATaGCACCACACCTCCCTTGGGCCCCAACCCGAAGCCTCCTCTCAG +
Preference number: 1 (lower is better)
Translates to: TRRAPKGTCPPVLPR*HHTSLGPQPEASSQ
Trigger: CTGAGAGGAGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGTCATCTGGGGAGAACAGGAGGGCATGTCCCTTTGGGAGCCCGCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR TCA 90 bp ACCAGGGGAAGAACCCTGGGGCAGCTGGCTTGTCCCAGCCATGCCTaGGTGCACCAAATATGGAGGCTGCGTCCTCACTCGGAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: TRGRTLGQLACPSHA*VHQIWRLRPHSESQ
Trigger: CTGGCTCTCCGAGTGAGGACGCAGCCTCCATATTTGGTGCACTCAGGCATGGCTGGGACAAGCCAGCTGCCCCAGGGTTCTTCCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTaGTGGGCATCCAGGGTGTGTGGGCTGGGATGCCCCAGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: LRATWIMDIRLFLWP*WASRVCGLGCPSLA
Trigger: GGCAAGGCTGGGGCATCCCAGCCCACACACCCTGGATGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 90 bp CCGGCCGCAGGCTCAGGTGTCCAGGCCAAGCTTCTCAGAGCCACCTaGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCATCC +
Preference number: 1 (lower is better)
Translates to: PAAGSGVQAKLLRAT*IMDIRLFLWPCWAS
Trigger: GGATGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAGAAGCTTGGCCTGGACACCTGAGCCTGCGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp GCATGTTTCATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTaGTTTCCCACCCAGAGCTCAGGCTGGGCTGTAGCCCCCAGCTCC +
Preference number: 1 (lower is better)
Translates to: ACFILCSAGWKHGAG*FPTQSSGWAVAPSS
Trigger: GGAGCTGGGGGCTACAGCCCAGCCTGAGCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAATGAAACATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp AGCTGGCTTGTCCCAGCCATGCCTGAGTGCACCAAATATGGAGGCTaGGTCCTCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCG +
Preference number: 1 (lower is better)
Translates to: SWLVPAMPECTKYGG*VLTRRARQPEHQDP
Trigger: CGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGAGGACGCAGCCTCCATATTTGGTGCACTCAGGCATGGCTGGGACAAGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp GCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGCCTaGCCAGGTCTGGGCGCCTCCACTCAGCCACTGTCCTCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: ALVSKITRCGPEPAA*PGLGASTQPLSSQC
Trigger: GCACTGGGAGGACAGTGGCTGAGTGGAGGCGCCCAGACCTGGGCAGGCAGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp ACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACACAGTACACGTaGACAAACTCCACTCCCCGGCGCTCCATGTCCTCCAGGATCTTG +
Preference number: 1 (lower is better)
Translates to: TGSASRTRMLSTQYT*TNSTPRRSMSSRIL
Trigger: CAAGATCCTGGAGGACATGGAGCGCCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR GCA 90 bp GGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTaGAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCTC +
Preference number: 1 (lower is better)
Translates to: GPALVESTSMFHSVF*RLEAWGRLLSHPEL
Trigger: GAGCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp AATCACCAGGGGAAGAACCCTGGGGCAGCTGGCTTGTCCCAGCCATaGCTGAGTGCACCAAATATGGAGGCTGCGTCCTCACTCGGAGAG +
Preference number: 1 (lower is better)
Translates to: NHQGKNPGAAGLSQP*LSAPNMEAASSLGE
Trigger: CTCTCCGAGTGAGGACGCAGCCTCCATATTTGGTGCACTCAGGCATGGCTGGGACAAGCCAGCTGCCCCAGGGTTCTTCCCCTGGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp TGCTCAAACATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTTGTaGTCCCTGAAGAACTCGGCCGTGGGCCCCAGAGTGAACTCGCTG +
Preference number: 1 (lower is better)
Translates to: CSNMTTLAGSRWKKL*SLKNSAVGPRVNSL
Trigger: CAGCGAGTTCACTCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR GCA 90 bp CAGCAGGCTGTCGCCACTTGTGTCCAGAGGCGACAGGAGAGGCCCTaGCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: QQAVATCVQRRQERP*PRGVYQHVSFCVLQ
Trigger: CTGCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGCCTCTGGACACAAGTGGCGACAGCCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 90 bp CCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCAGGCTaGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCTCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: PSWSLPACFILCSAG*KHGAGCFPTQSSGW
Trigger: CCAGCCTGAGCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 90 bp TGCAGAAGCACATCCTGTGTAGCTTATGCAGCTTCTAGTGCTCGGTaGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCC +
Preference number: 1 (lower is better)
Translates to: CRSTSCVAYAASSAR*GVVDPQGGLPKGHA
Trigger: GGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGCTACACAGGATGTGCTTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp TCCAGGATAACCTTGCCATCAAAGGTCACAGCAGGCAGCAGGCGCTaGTCAAACATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTTG +
Preference number: 1 (lower is better)
Translates to: SRITLPSKVTAGSRR*SNMTTLAGSRWKKL
Trigger: CAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGCTGTGACCTTTGATGGCAAGGTTATCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR CCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTaGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTG +
Preference number: 1 (lower is better)
Translates to: PITGSSAKEEGAALE*VELSPSFWFCICRL
Trigger: CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 90 bp TTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTaGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGCAGA +
Preference number: 1 (lower is better)
Translates to: LLVRLLRKRGQPSSG*NCPPHSGSASVGCR
Trigger: TCTGCAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 90 bp AGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTaGAGAAGCACATCCTGTGTAGCTTATGCAGCTTCTAGTGCTCGG +
Preference number: 1 (lower is better)
Translates to: SGWNCPPHSGSASVG*RSTSCVAYAASSAR
Trigger: CCGAGCACTAGAAGCTGCATAAGCTACACAGGATGTGCTTCTGCAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGTGCTCGGTGGGGTGTaGTGGATCCACAAGGCGGGC +
Preference number: 2 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEVLGGV*WIHKAG
Trigger: GCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGGCAGCCCTCGAGTaGGTGGAATTGTCCCCCTCA +
Preference number: 2 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEGAALE*VELSPS
Trigger: TGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCC...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR TCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCCTGTTCTCCCCAGATaGCACCACACCTCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEPVLPR*HHTSLG
Trigger: CCCAAGGGAGGTGTGGTGTCATCTGGGGAGAACAGG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR GCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCATCGGGACTTCCAGGATaGCGGGGCTGGCAGGTCTCG +
Preference number: 2 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQASGLPG*RGWQVS
Trigger: CGAGACCTGCCAGCCCCGGCATCCTGGAAGTCCCGA...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCTCGGGACTTCCAGGATaGCGGGGCTGGCAGGTCTCG +
Preference number: 2 (lower is better)
Translates to: AYAASSARWGVVDPQGGLSGLPG*RGWQVS
Trigger: CGAGACCTGCCAGCCCCGGCATCCTGGAAGTCCCGA...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAACCAGGATGCCGGGGCTaGCAGGTCTCGGGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: PITGSSAKEEGAALEWVEPGCRG*QVSGES
Trigger: AGACTCCCCCGAGACCTGCCAGCCCCGGCATCCTGG...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGTGCAGGCTGGAAGCATaGGGCAGGCTGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGECRLEA*GRLLSH
Trigger: GTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCA...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCCCACAGCCAGGAATaGAGCCACAGAGCCCCCAGC +
Preference number: 2 (lower is better)
Translates to: AYAASSARWGVVDPQGGLPHSQE*SHRAPS
Trigger: GCTGGGGGCTCTGTGGCTCCATTCCTGGCTGTGGGG...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCACTCGGTGGGGTGTGGTaGATCCACAAGGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQALGGVW*IHKAGS
Trigger: GGAGCCCGCCTTGTGGATCCACCACACCCCACCGAG...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR GCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGTGTGTGGGCTGGGATaGCCCAGCCTTGCCCCCATT +
Preference number: 2 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAVCGLG*PSLAPI
Trigger: AATGGGGGCAAGGCTGGGGCATCCCAGCCCACACAC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCACACCACACCTCCCTTaGGCCCCAACCCGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: AYAASSARWGVVDPQGGLTPHLP*APTRSL
Trigger: GAGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGT...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp CACACAGAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACGCCCCCGTTGCCGTCTaGGGCCATGGCAACTTTGTC +
Preference number: 2 (lower is better)
Translates to: HTEADEDRVRQPHQDVVHAPVAV*GHGNFV
Trigger: GACAAAGTTGCCATGGCCCCAGACGGCAACGGGGGC...GTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR CAA 90 bp TCTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTaGCTGGGCATCCAGGGTGTGTGGGCTGGGATGCCCCAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: SQSHLDHGHQALSVA*LGIQGVWAGMPQPC
Trigger: GCAAGGCTGGGGCATCCCAGCCCACACACCCTGGATGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 90 bp CGCTGCTCAAACATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTaGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGAGTGAACTCG +
Preference number: 2 (lower is better)
Translates to: RCSNMTTLAGSRWKK*CSLKNSAVGPRVNS
Trigger: CGAGTTCACTCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR CAA 90 bp ACACAGAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTaGTCCACACAGTACACGTGCACAAACTCCACTCCCCGGCGCTCC +
Preference number: 2 (lower is better)
Translates to: TQKPMKTGSASRTRM*STQYTCTNSTPRRS
Trigger: GGAGCGCCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAAACACCACACCTCCCTTaGGCCCCAACCCGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: PITGSSAKEEGAALEWVETPHLP*APTRSL
Trigger: GAGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGT...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTATCAGGCTCTTTCTGTaGCCTTGCTGGGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGIRLFL*PCWASR
Trigger: CCTGGATGCCCAGCAAGGCCACAGAAAGAGCCTGAT...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR TCA 90 bp AAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACACAGTACACGTGCACAAGAAGTTGTGCTCCCTaGAGAACTCGGCCGTGGGCC +
Preference number: 2 (lower is better)
Translates to: KTGSASRTRMLSTQYTCTRSCAP*RTRPWA
Trigger: GGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCT...TGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAACTGTGTTCTGCAGGCTaGAAGCATGGGGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PITGSSAKEEGAALEWVELCSAG*KHGAGC
Trigger: GCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAG...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGAGGCCCTGCCCTCGTaGAGTCTACCAGCATGTTTC +
Preference number: 2 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQEALPS*SLPACF
Trigger: GAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp CACACAGAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACTTGGCGGGGTCCAGGTaGAAGAAGTTGTGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: HTEADEDRVRQPHQDVVHLAGSR*KKLCSL
Trigger: CAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAA...GTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR GCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTTTTCATTCTGTGTTCTaGAGGCTGGAAGCATGGGGC +
Preference number: 2 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGFHSVF*RLEAWG
Trigger: GCCCCATGCTTCCAGCCTGCAGAACACAGAATGAAA...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR GCA 90 bp GAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACACAGTAGCAGGCAGCAGGCGCTaGTCAAACATGACCACGTTG +
Preference number: 2 (lower is better)
Translates to: EADEDRVRQPHQDVVHTVAGSRR*SNMTTL
Trigger: CAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGC...TACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTTCTAGTGCTCGGTaGGGTGTGGTGGATCCACAA +
Preference number: 2 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAASSAR*GVVDPQ
Trigger: TTGTGGATCCACCACACCCCACCGAGCACTAGAAGC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 90 bp GGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAATaGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGCAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GSSAKEEGAALEWVE*SPSFWFCICRLQKH
Trigger: GTGCTTCTGCAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 90 bp TCAAAGGTCACAGCAGGCAGCAGGCGCTGCTCAAACATGACCACGTaGGCGGGGTCCAGGTGGAAGAAGTTGTGCTCCCTGAAGAACTCG +
Preference number: 2 (lower is better)
Translates to: SKVTAGSRRCSNMTT*AGSRWKKLCSLKNS
Trigger: CGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGCTGTGACCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGGTCCCAAGTCCCTCTaGCTCTTGACTAGACCCCAC +
Preference number: 2 (lower is better)
Translates to: ALEWVELSPSFWFCICRLGPKSL*LLTRPH
Trigger: GTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 90 bp CCGTCTGGGGCCATGGCAACTTTGTCTTTCCGCTCCAGGATAACCTaGCCATCAAAGGTCACAGCAGGCAGCAGGCGCTGCTCAAACATG +
Preference number: 2 (lower is better)
Translates to: PSGAMATLSFRSRIT*PSKVTAGSRRCSNM
Trigger: CATGTTTGAGCAGCGCCTGCTGCCTGCTGTGACCTTTGATGGCAAGGTTATCCTGGAGCGGAAAGACAAAGTTGCCATGGCCCCAGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR GCA 90 bp CAACACACAGAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCAGGTGGAAGAAGTTGTaGTCCCTGAAGAACTCGGCC +
Preference number: 2 (lower is better)
Translates to: QHTEADEDRVRQPHQDVVRWKKL*SLKNSA
Trigger: GGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCT...GACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCCAGGATGCCGGGGCTaGCAGGTCTCGGGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAPGCRG*QVSGES
Trigger: AGACTCCCCCGAGACCTGCCAGCCCCGGCATCCTGG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCATTGTCCCCCTCATTCTaGTTCTGCATCTGTAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQALSPSF*FCICRL
Trigger: CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAA...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCCAGGGTGTGTGGGCTaGGATGCCCCAGCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAPGCVG*DAPALP
Trigger: GGGCAAGGCTGGGGCATCCCAGCCCACACACCCTGG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGAGCCACCTGGATCATaGACATCAGGCTCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAEPPGS*TSGSFC
Trigger: ACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCTCGGTGGGGTGTGGTaGATCCACAAGGCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPALGGVW*IHKAGS
Trigger: GGAGCCCGCCTTGTGGATCCACCACACCCCACCGAG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGCTTCTAGTGCTCGGTaGGGTGTGGTGGATCCACAA +
Preference number: 2 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGASSAR*GVVDPQ
Trigger: TTGTGGATCCACCACACCCCACCGAGCACTAGAAGC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGCAGCCCTCGAGTGGGTaGAATTGTCCCCCTCATTCT +
Preference number: 2 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGQPSSG*NCPPHS
Trigger: AGAATGAGGGGGACAATTCCACCCACTCGAGGGCTG...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGCTTCTCAGAGCCACCTaGATCATGGACATCAGGCTC +
Preference number: 2 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGLLRAT*IMDIRL
Trigger: GAGCCTGATGTCCATGATCCAGGTGGCTCTGAGAAG...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCCAGGGGAAGAACCCTaGGGCAGCTGGCTTGTCCCA +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAPGEEP*GSWLVP
Trigger: TGGGACAAGCCAGCTGCCCCAGGGTTCTTCCCCTGG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGGGATGCCCCAGCCTTaGCCCCATTACTGGTTCGTC +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAGMPQP*PHYWFV
Trigger: GACGAACCAGTAATGGGGGCAAGGCTGGGGCATCCC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTTGCAGGCTGGAAGCATaGGGCAGGCTGCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPACRLEA*GRLLSH
Trigger: GTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCA...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGTAGTGGCCCTCCACTaGGGACTGTGGGTTTCGAGG +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAVVALH*GLWVSR
Trigger: CCTCGAAACCCACAGTCCCCAGTGGAGGGCCACTAC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR TCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTTGTCCCAGCCATGCCTaGGTGCACCAAATATGGAGG +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPACPSHA*VHQIWR
Trigger: CCTCCATATTTGGTGCACTCAGGCATGGCTGGGACA...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCCAGCCATGCCTGAGTaGACCAAATATGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAPAMPE*TKYGGC
Trigger: GCAGCCTCCATATTTGGTGCACTCAGGCATGGCTGG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR TCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGGTGCCTCTGACTCATaGAATCCCGGATTAGTCAGC +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPAGASDS*NPGLVS
Trigger: GCTGACTAATCCGGGATTTCATGAGTCAGAGGCACC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGATCCCACTGGTTCTTaGGGAAGCACAGAAAACTCA +
Preference number: 2 (lower is better)
Translates to: IIFWALVSKITRCGPEPADPTGS*GSTENS
Trigger: TGAGTTTTCTGTGCTTCCCCAAGAACCAGTGGGATC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CAA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGACACCACACCTCCCTaGGGCCCCAACCCGAAGCCT +
Preference number: 3 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPDTTPP*GPNPKP
Trigger: AGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGTC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CAA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGACACCACACCTCCCTaGGGCCCCAACCCGAAGCCT +
Preference number: 3 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEDTTPP*GPNPKP
Trigger: AGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGTC...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR TCA 72 bp GCTCCCAAAGGGACATGCCCTCCTGTTCTCCCCAGATaGCACCACACCTCCCTTGGGCCCCAACCCGAAGCC +
Preference number: 3 (lower is better)
Translates to: APKGTCPPVLPR*HHTSLGPQPEA
Trigger: GGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGTCATCTGGGGAGAACAGGAGGGCATGTCCCTTTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR TCA 72 bp TGGAGGCTGCGTCCTCACTCGGAGAGCCAGGCAGCCTaGGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: WRLRPHSESQAA*APRSVRSSRQL
Trigger: CAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGAGGACGCAGCCTCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CAA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGCAGGCTGTCGCCACTaGTGTCCAGAGGCGACAGGA +
Preference number: 3 (lower is better)
Translates to: AYAASSARWGVVDPQGGLAGCRH*CPEATG
Trigger: TCCTGTCGCCTCTGGACACAAGTGGCGACAGCCTGC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR-3UTR CAA 90 bp AACTCCACTCCCCGGCGCTCCATGTCCTCCAGGATCTTGTGGTCCTCCAGCGCGTCAAACATGACCACGTaGGCGGGGTCCAGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: NSTPRRSMSSRILWSSSASNMTT*AGSRWK
Trigger: CTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGA...CGCGCTGGAGGACCACAAGATCCTGGAGGACATGGAGCGCCGGGGAGTGGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR GCA 72 bp TCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGCCTaGCCAGGTCTGGGCGCCTCCACTCAGCCACTGTCC +
Preference number: 3 (lower is better)
Translates to: SKITRCGPEPAA*PGLGASTQPLS
Trigger: GGACAGTGGCTGAGTGGAGGCGCCCAGACCTGGGCAGGCAGCAGGCTCAGGCCCACACCTTGTGATTTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 72 bp ATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTTGTaGTCCCTGAAGAACTCGGCCGTGGGCCCCAGAGTG +
Preference number: 3 (lower is better)
Translates to: MTTLAGSRWKKL*SLKNSAVGPRV
Trigger: CACTCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR GCA 72 bp GCCAGCCGCACCAGGATGTTGTCCACACAGTACACGTaGACAAACTCCACTCCCCGGCGCTCCATGTCCTCC +
Preference number: 3 (lower is better)
Translates to: ASRTRMLSTQYT*TNSTPRRSMSS
Trigger: GGAGGACATGGAGCGCCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CAA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCTCGAGTGGGTGGAATaGTCCCCCTCATTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGELEWVE*SPSFWF
Trigger: GAACCAGAATGAGGGGGACAATTCCACCCACTCGAG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 72 bp ACCTTGCCATCAAAGGTCACAGCAGGCAGCAGGCGCTaGTCAAACATGACCACGTTGGCGGGGTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: TLPSKVTAGSRR*SNMTTLAGSRW
Trigger: CCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGCTGTGACCTTTGATGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CAA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCAAGTCCCTCTGCCTCTaGACTAGACCCCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: AYAASSARWGVVDPQGGLKSLCL*TRPHSQ
Trigger: CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTT...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp CGCTGCTCAAACATGACCACGTTGGCGGGGTCCAGGTaGAAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTG +
Preference number: 3 (lower is better)
Translates to: RCSNMTTLAGSR*KKLCSLKNSAV
Trigger: CACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR-3UTR CAA 90 bp GAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACACAGTAGGGGCCATGGCAACTTaGTCTTTCCGCTCCAGGATA +
Preference number: 3 (lower is better)
Translates to: EADEDRVRQPHQDVVHTVGAMAT*SFRSRI
Trigger: TATCCTGGAGCGGAAAGACAAAGTTGCCATGGCCCC...TACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR TCA 72 bp CAGGCAGCTGGGGTGAGGGGTGGTGCCTCTGACTCATaGAATCCCGGATTAGTCAGCAACCATCACAGAGGC +
Preference number: 3 (lower is better)
Translates to: QAAGVRGGASDS*NPGLVSNHHRG
Trigger: GCCTCTGTGATGGTTGCTGACTAATCCGGGATTTCATGAGTCAGAGGCACCACCCCTCACCCCAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp GGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTaGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATC +
Preference number: 3 (lower is better)
Translates to: GSSAKEEGAALE*VELSPSFWFCI
Trigger: GATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp GGCTCAGGTGTCCAGGCCAAGCTTCTCAGAGCCACCTaGATCATGGACATCAGGCTCTTTCTGTGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: GSGVQAKLLRAT*IMDIRLFLWPC
Trigger: GCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAGAAGCTTGGCCTGGACACCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp ACATCCTGTGTAGCTTATGCAGCTTCTAGTGCTCGGTaGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: TSCVAYAASSAR*GVVDPQGGLPK
Trigger: CTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGCTACACAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp CGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTaGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTA +
Preference number: 3 (lower is better)
Translates to: RLLRKRGQPSSG*NCPPHSGSASV
Trigger: TACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp GTGTCCAGGCCAAGCTTCTCAGAGCCACCTGGATCATaGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: VSRPSFSEPPGS*TSGSFCGLAGH
Trigger: ATGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAGAAGCTTGGCCTGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR GCA 72 bp CTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTaGAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: LVESTSMFHSVF*RLEAWGRLLSH
Trigger: GTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp TTGTGTCCAGAGGCGACAGGAGAGGCCCTGCCCTCGTaGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: LCPEATGEALPS*SLPACFILCSA
Trigger: TGCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGCCTCTGGACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CCA 72 bp GTTTCGAGGTGGGGGCAGAGGATGAGTTGGCAGCAGTaGCATATCATAGCTCTCTTCATGTCAGCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: VSRWGQRMSWQQ*HIIALFMSAGR
Trigger: TCTCCCTGCTGACATGAAGAGAGCTATGATATGCCACTGCTGCCAACTCATCCTCTGCCCCCACCTCGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGTGCAGCGGGTCCCGTaGCGCTCACCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPVQRVP*RSPASC
Trigger: GCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCAC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGGCCGCGAGTACGCCTaGCCCTGCAGGCAGACGGGG +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPGREYA*PCRQTG
Trigger: CCCCGTCTGCCTGCAGGGCCAGGCGTACTCGCGGCC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR GCA 90 bp GGGGTCCAGGTGGAAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGGTGTCTCGGGGTCGCTaGGGCTGGCCCTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GVQVEEVVLPEELGRGPQVSRGR*GWPCPR
Trigger: GCGTGGGCAGGGCCAGCCGCAGCGACCCCGAGACAC...CTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR TCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGCAAGGGAGGCGCGGTaGGCCGGCCGCGAGTACGCC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQAREAR*AGREYA
Trigger: GGCGTACTCGCGGCCGGCTCACCGCGCCTCCCTTGC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR GCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCGCTCACCGGCCAGCTaGTCCACCCGCCGAATCCGC +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGERSPAS*STRRIR
Trigger: GCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCGTACCAGGGGACGGTaGAGCGGGTCCCGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGERTRGR*SGSRGA
Trigger: AGCGCCACGGGACCCGCTGCACCGTCCCCTGGTACG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTTGGGTGAGCAGGGCCTaGCGAGCGGTGCGGGGACTG +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGWVSRA*RAVRGL
Trigger: CAGTCCCCGCACCGCTCGCCAGGCCCTGCTCACCCA...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGTGCAGCGGGTCCCGTaGCGCTCACCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQVQRVP*RSPASC
Trigger: GCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCAC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTGGTCTCGGGGGAGTCTaGGGACAGTCTGGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGGLGGV*GQSGRV
Trigger: GACCCGCCCAGACTGTCCCCAGACTCCCCCGAGACC...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCCCCCACAGCCAGGAATaGAGCCACAGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPPHSQE*SHRAPS
Trigger: GCTGGGGGCTCTGTGGCTCCATTCCTGGCTGTGGGG...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCACACCAGGGGACGGTaGAGCGGGTCCCGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLHTRGR*SGSRGA
Trigger: AGCGCCACGGGACCCGCTGCACCGTCCCCTGGTGTG...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR GCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCAGTAGAGGCCCCCGTTaGCGTCTGGGGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPSRGPR*RLGPWQ
Trigger: TTGCCATGGCCCCAGACGGCAACGGGGGCCTCTACT...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGCCTGAGCCTGCTGCCTaGCCAGGTCTGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQPEPAA*PGLGAS
Trigger: GGAGGCGCCCAGACCTGGGCAGGCAGCAGGCTCAGG...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCGCTCCGCCTGCAGCTaGTACAGGGTCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGRSACS*YRVFRL
Trigger: CAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCGCTCCGCCTGCAGCTaGTACAGGGTCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGERSACS*YRVFRL
Trigger: CAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCAGGATGAGCGGGGACTaGAACTCCCGGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPRMSGD*NSRPCR
Trigger: CCTGCAAGGCCGGGAGTTCCAGTCCCCGCTCATCCT...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGGGGCAGCCCTCGAGTaGGTGGAATTGTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPGAALE*VELSPS
Trigger: TGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTGAAGCAGCAGGCAGCTaGGGTGAGGGGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGEAAGS*GEGWCL
Trigger: GAGGCACCACCCCTCACCCCAGCTGCCTGCTGCTTC...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCCCTGTTCTCCCCAGATaGCACCACACCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPPVLPR*HHTSLG
Trigger: CCCAAGGGAGGTGTGGTGTCATCTGGGGAGAACAGG...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGAGTAGAGGCCCCCGTTaGCGTCTGGGGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGESRGPR*RLGPWQ
Trigger: TTGCCATGGCCCCAGACGGCAACGGGGGCCTCTACT...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGGGCCTGGCGAGCGGTaGGGGGACTGTCCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLGPGER*GDCPCR
Trigger: CCGACAGGGACAGTCCCCGCACCGCTCGCCAGGCCC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCCGGGCGCGCACGTCCTaGTCCGAAGCCATGTCGCCG +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSRARTS*SEAMSP
Trigger: CGGCGACATGGCTTCGGAGCAGGACGTGCGCGCCCG...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTCCCAGGCGAGTGCCCTaGCCCCCAGCCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCPRRVP*PPASSR
Trigger: CCTGCTGCTGGCTGGGGGGCAGGGCACTCGCCTGGG...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCGGGACACCGTCCACCTaGCACACCACGCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSGTPST*HTTPTG
Trigger: GCCCGTGGGCGTGGTGTGCCAGGTGGACGGTGTCCC...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAGGATGCCGGGGCTaGCAGGTCTCGGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLPGCRG*QVSGES
Trigger: AGACTCCCCCGAGACCTGCCAGCCCCGGCATCCTGG...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCACCAGGGTGTGTGGGCTaGGATGCCCCAGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAPGCVG*DAPALP
Trigger: GGGCAAGGCTGGGGCATCCCAGCCCACACACCCTGG...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGTAGTGGCCCTCCACTaGGGACTGTGGGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPVVALH*GLWVSR
Trigger: CCTCGAAACCCACAGTCCCCAGTGGAGGGCCACTAC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTAGAAGTTGTGCTCCCTaGAGAACTCGGCCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGRSCAP*RTRPWA
Trigger: GGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCT...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp TGCGCCCTGCAACACACAGAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGAGAAGTTGTGCTCCCTaGAGAACTCGGCCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CALQHTEADEDRVRQPHQRSCAP*RTRPWA
Trigger: GGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCT...CTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTGTTGCAGGGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR TCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTGAGAGCCAGGCAGCCTaGGCACCAAGATCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGESQAA*APRSVR
Trigger: TCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTC...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTCGCTCACCGGCCAGCTaGTCCACCCGCCGAATCCGC +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCRSPAS*STRRIR
Trigger: GCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCG...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGCAATGTCCCGGTCTGTaGCGGGGTTGGGGCTCGCGT +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQQCPGL*RGWGSR
Trigger: ACGCGAGCCCCAACCCCGGCACAGACCGGGACATTG...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR GCA 90 bp CTCCAGGATCTTGTGGTCCTCCAGCGCGCAGTAGAGGCCCCCGTTGCCGTCTGGGCAGGCAGCAGGCGCTaGTCAAACATGACCACGTTG +
Preference number: 4 (lower is better)
Translates to: LQDLVVLQRAVEAPVAVWAGSRR*SNMTTL
Trigger: CAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGC...CCAGACGGCAACGGGGGCCTCTACTGCGCGCTGGAGGACCACAAGATCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR GCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGGGCCTGGCGAGCGGTaGGGGGACTGTCCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGGPGER*GDCPCR
Trigger: CCGACAGGGACAGTCCCCGCACCGCTCGCCAGGCCC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGCCTGAGCCTGCTGCCTaGCCAGGTCTGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLPEPAA*PGLGAS
Trigger: GGAGGCGCCCAGACCTGGGCAGGCAGCAGGCTCAGG...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCGTGTCTCGGGGTCGCTaGGGCTGGCCCTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCVSRGR*GWPCPR
Trigger: GCGTGGGCAGGGCCAGCCGCAGCGACCCCGAGACAC...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCGCTCCATGTCCTCCAGGATCTTGTGGTCCTCCAGCGCGCAGTAGAGGCCCCTTGGCGGGGTCCAGGTaGAAGAAGTTGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GAPCPPGSCGPPARSRGPLAGSR*KKLCSL
Trigger: CAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAA...GGGGCCTCTACTGCGCGCTGGAGGACCACAAGATCCTGGAGGACATGGAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCCTTTTCCACCACCTTaGCGCCACAGTCTGCGCCCT +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEPFPPP*RHSLRP
Trigger: AGGGCGCAGACTGTGGCGCCAAGGTGGTGGAAAAGG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCACTGTCCCTGTCGGCTaGCTCTGCGTTCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPTVPVG*LCVLQW
Trigger: CCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGT...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTGGGTGAGCAGGGCCTaGCGAGCGGTGCGGGGACTG +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCWVSRA*RAVRGL
Trigger: CAGTCCCCGCACCGCTCGCCAGGCCCTGCTCACCCA...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTTGCAGGCTGGAAGCATaGGGCAGGCTGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGCRLEA*GRLLSH
Trigger: GTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCA...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGCTGTGTTCTGCAGGCTaGAAGCATGGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGELCSAG*KHGAGC
Trigger: GCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAG...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGCTCGGTGGGGTGTGGTaGATCCACAAGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQLGGVW*IHKAGS
Trigger: GGAGCCCGCCTTGTGGATCCACCACACCCCACCGAG...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGTGCTCGGTGGGGTGTaGTGGATCCACAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLVLGGV*WIHKAG
Trigger: GCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGTAGTGGCCCTCCACTaGGGACTGTGGGTTTCGAGG +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEVVALH*GLWVSR
Trigger: CCTCGAAACCCACAGTCCCCAGTGGAGGGCCACTAC...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCCGCAGGAGGTGCTCCTaGCCAGCGCGCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCRRRCS*PARCSR
Trigger: CCGGCTGCAGCGCGCTGGCCAGGAGCACCTCCTGCG...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS-3UTR CCA 90 bp TCAAACATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTTGTGCTCCCTGAAGCGCAGGAGGTGCTCCTaGCCAGCGCGCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SNMTTLAGSRWKKLCSLKRRRCS*PARCSR
Trigger: CCGGCTGCAGCGCGCTGGCCAGGAGCACCTCCTGCG...CTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR TCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGTGCGGTCTCAGGACTaGTCTCGCTGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEVRSQD*SRCTPP
Trigger: TGGTGGAGTACAGCGAGATCAGTCCTGAGACCGCAC...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTGGAAACCAATGGGGATaGGTAGTGGCCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGGNQWG*VVALHW
Trigger: CCAGTGGAGGGCCACTACTCATCCCCATTGGTTTCC...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTGAGTACGCCTGGCCCTaGAGGCAGACGGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCEYAWP*RQTGLG
Trigger: TCCGAGCCCCGTCTGCCTGCAGGGCCAGGCGTACTC...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGGCTGGCCTGGAGGTTaGAGTGAGCCAAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLGWPGG*SEPRSR
Trigger: GCGTGACCTTGGCTCACTGCAACCTCCAGGCCAGCC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCGGGACACCGTCCACCTaGCACACCACGCCCACGGGC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCGTPST*HTTPTG
Trigger: GCCCGTGGGCGTGGTGTGCCAGGTGGACGGTGTCCC...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGCTGTACTCCACCACCTaGGGGACACCGTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQLYSTT*GTPSTW
Trigger: CCAGGTGGACGGTGTCCCCCAGGTGGTGGAGTACAG...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGAGGATGAGCGGGGACTaGAACTCCCGGCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQRMSGD*NSRPCR
Trigger: CCTGCAAGGCCGGGAGTTCCAGTCCCCGCTCATCCT...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGAGTCTGGGGACAGTCTaGGCGGGTCAGGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQSLGTV*AGQDSC
Trigger: GCAGGAGTCCTGACCCGCCCAGACTGTCCCCAGACT...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACCAGGATGCCGGGGCTaGCAGGTCTCGGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAPGCRG*QVSGES
Trigger: AGACTCCCCCGAGACCTGCCAGCCCCGGCATCCTGG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGACACCACACCTCCCTTaGGCCCCAACCCGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQTPHLP*APTRSL
Trigger: GAGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGT...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGCTTCTAGTGCTCGGTaGGGTGTGGTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPASSAR*GVVDPQ
Trigger: TTGTGGATCCACCACACCCCACCGAGCACTAGAAGC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCACAGGGTCTTCCGGCTaGGCAGCCCCACACGGTACA +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLTGSSG*AAPHGT
Trigger: TGTACCGTGTGGGGCTGCCCAGCCGGAAGACCCTGT...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409858.8
3UTR CAA 72 bp GGGCATCCAGGGTGTGTGGGCTGGGATGCCCCAGCCTaGCCCCCATTACTGGTTCGTCTGCTAAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GHPGCVGWDAPA*PPLLVRLLRKR
Trigger: CCTCTTCCTTAGCAGACGAACCAGTAATGGGGGCAAGGCTGGGGCATCCCAGCCCACACACCCTGGATGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGGTCTTCATCCAGGATaGGCGGGGACTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQGLHPG*AGTGTP
Trigger: GGGAGTTCCAGTCCCCGCTCATCCTGGATGAAGACC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGTCCACACAGTACACGTaGACAAACTCCACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGESTQYT*TNSTPR
Trigger: CCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGA...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GGGGTCCAGGTGGAAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGTCCACACAGTACACGTaGACAAACTCCACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GVQVEEVVLPEELGRGPQSTQYT*TNSTPR
Trigger: CCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGA...CTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCGGGACTTCCAGGATaGCGGGGCTGGCAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCSGLPG*RGWQVS
Trigger: CGAGACCTGCCAGCCCCGGCATCCTGGAAGTCCCGA...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCTCTTTCTGTGGCCTTaGTGGGCATCCAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGLFLWP*WASRVC
Trigger: ACACACCCTGGATGCCCAGCAAGGCCACAGAAAGAG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CAGGATAACCTTGCCATCAAAGGTCACAGCAGGCAGCAGGCGCTGCTCAAACATCGGGCGCGCACGTCCTaGTCCGAAGCCATGTCGCCG +
Preference number: 4 (lower is better)
Translates to: QDNLAIKGHSRQQALLKHRARTS*SEAMSP
Trigger: CGGCGACATGGCTTCGGAGCAGGACGTGCGCGCCCG...ATGTTTGAGCAGCGCCTGCTGCCTGCTGTGACCTTTGATGGCAAGGTTATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGGCCAGGCCCCATTTTaGGCCGGTTCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQGQAPF*AGSGQC
Trigger: ACATTGCCCAGAACCGGCCCAAAATGGGGCCTGGCC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGTGCCGTCTGGGGCCATaGCAACTTTGTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGECRLGP*QLCLSA
Trigger: AGCGGAAAGACAAAGTTGCCATGGCCCCAGACGGCA...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CAGGTGGAAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGAGTGAAGCCCCCGTTGCCGTCTaGGGCCATGGCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: QVEEVVLPEELGRGPQSEAPVAV*GHGNFV
Trigger: GACAAAGTTGCCATGGCCCCAGACGGCAACGGGGGC...TTCACTCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGCGATATCTCACAGATaGCCGGAGGGTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPAISHR*PEGLHL
Trigger: CAAATGGAGACCCTCCGGCCATCTGTGAGATATCGC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGGTCTCGGGGGAGTCTaGGGACAGTCTGGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGGLGGV*GQSGRV
Trigger: GACCCGCCCAGACTGTCCCCAGACTCCCCCGAGACC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACCCCACAGCCAGGAATaGAGCCACAGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAPHSQE*SHRAPS
Trigger: GCTGGGGGCTCTGTGGCTCCATTCCTGGCTGTGGGG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCACACCACACCTCCCTTaGGCCCCAACCCGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSTPHLP*APTRSL
Trigger: GAGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGT...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGTGCTCGGTGGGGTGTaGTGGATCCACAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLVLGGV*WIHKAG
Trigger: GCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCAGCCCTCGAGTGGGTaGAATTGTCCCCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGQPSSG*NCPPHS
Trigger: AGAATGAGGGGGACAATTCCACCCACTCGAGGGCTG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCGGGGCAGCCCTCGAGTaGGTGGAATTGTCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSGAALE*VELSPS
Trigger: TGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCC...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 72 bp CACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTaGCTGGGCATCCAGGGTGTGTGGGCTGGGATGCCC +
Preference number: 4 (lower is better)
Translates to: HLDHGHQALSVA*LGIQGVWAGMP
Trigger: GGGCATCCCAGCCCACACACCCTGGATGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 72 bp AACATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTaGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NMTTLAGSRWKK*CSLKNSAVGPR
Trigger: TCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
3UTR CAA 72 bp ACAGCAGGCAGCAGGCGCTGCTCAAACATGACCACGTaGGCGGGGTCCAGGTGGAAGAAGTTGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: TAGSRRCSNMTT*AGSRWKKLCSL
Trigger: CAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR TCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCAGAAGTTGTGCTCCCTaGAGAACTCGGCCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSRSCAP*RTRPWA
Trigger: GGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCT...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAACCTGTTCTCCCCAGATaGCACCACACCTCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVEPVLPR*HHTSLG
Trigger: CCCAAGGGAGGTGTGGTGTCATCTGGGGAGAACAGG...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCTGCCACTGCCTCCCCTaGGATGAGAAAGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSCHCLP*DEKAGE
Trigger: CTCGCCTGCTTTCTCATCTCAGGGGAGGCAGTGGCA...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCCGAATCCGCTCCGCCTaGAGCTGGTACAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSRIRSA*SWYRVF
Trigger: GAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCG...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGAGGTGGAAGAAGTTGTaGTCCCTGAAGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGERWKKL*SLKNSA
Trigger: GGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCT...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGCAGGCAGCAGGCGCTaGTCAAACATGACCACGTTG +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLAGSRR*SNMTTL
Trigger: CAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAAGGGCTCCTCGGGGTATaGCTTTTCCACCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVEGLLGV*LFHHLG
Trigger: GCCAAGGTGGTGGAAAAGGCATACCCCGAGGAGCCC...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTTGGAACTCCCGGCCTTaGAGGTACACTTCTAAACCC +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGWNSRP*RYTSKP
Trigger: GGGTTTAGAAGTGTACCTGCAAGGCCGGGAGTTCCA...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGTGTGTGGGCTGGGATaGCCCAGCCTTGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLVCGLG*PSLAPI
Trigger: AATGGGGGCAAGGCTGGGGCATCCCAGCCCACACAC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCAGGCTGGCCTGGAGGTTaGAGTGAGCCAAGGTCACGC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAGWPGG*SEPRSR
Trigger: GCGTGACCTTGGCTCACTGCAACCTCCAGGCCAGCC...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGACTGTCCCTGTCGGCTaGCTCTGCGTTCTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQTVPVG*LCVLQW
Trigger: CCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGT...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACATTTGGGGGCAAGCTaGGCAGCTCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAHLGAS*AALGAR
Trigger: CCTGGCTCCCAGAGCTGCCCAGCTTGCCCCCAAATG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCGAAGCAGCAGGCAGCTaGGGTGAGGGGTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCEAAGS*GEGWCL
Trigger: GAGGCACCACCCCTCACCCCAGCTGCCTGCTGCTTC...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCGGGCAGAGGATGAGTTaGCAGCAGTGGCATATCATA +
Preference number: 4 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPGQRMS*QQWHII
Trigger: TATGATATGCCACTGCTGCCAACTCATCCTCTGCCC...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCCACGGTACATACCCTTaGGGTAGGTCACGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSHGTYP*GRSRPG
Trigger: GCCTGGGCGTGACCTACCCCAAGGGTATGTACCGTG...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
3UTR CAA 72 bp CCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTaGTCCACACAGTACACGTGCACAAACTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: PMKTGSASRTRM*STQYTCTNSTP
Trigger: GGGAGTGGAGTTTGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR TCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCAACACACAGAAGCCGATaGAGACAGGGTCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWATHRSR*RQGPPA
Trigger: GGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTGT...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGGTCTTCATCCAGGATaGGCGGGGACTGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLGLHPG*AGTGTP
Trigger: GGGAGTTCCAGTCCCCGCTCATCCTGGATGAAGACC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCAGAGGCCGCCGGCATTaGTCCCACTGGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCRGRRH*SHWFLG
Trigger: CCCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCT...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGAGAGGCCGCCGGCATTaGTCCCACTGGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGRGRRH*SHWFLG
Trigger: CCCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCT...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGAGGGGTGGTGCCTCTaGCTCATGAAATCCCGGATT +
Preference number: 4 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAEGWCL*LMKSRI
Trigger: AATCCGGGATTTCATGAGTCAGAGGCACCACCCCTC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGAGGGGTGGTGCCTCTaGCTCATGAAATCCCGGATT +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQEGWCL*LMKSRI
Trigger: AATCCGGGATTTCATGAGTCAGAGGCACCACCCCTC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCTGTCCCAGCCATGCCTaGGTGCACCAAATATGGAGG +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLCPSHA*VHQIWR
Trigger: CCTCCATATTTGGTGCACTCAGGCATGGCTGGGACA...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CAGGTGGAAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGAGTGAACCACAGTCTGCGCCCTaGAACACACAGAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: QVEEVVLPEELGRGPQSEPQSAP*NTQKPM
Trigger: CATCGGCTTCTGTGTGTTGCAGGGCGCAGACTGTGG...TTCACTCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR GCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAACTTGGCGCCACAGTCTaGGCCCTGCAACACACAGAA +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVELGATV*ALQHTE
Trigger: TTCTGTGTGTTGCAGGGCGCAGACTGTGGCGCCAAG...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AGGGTCCGCCAGCCGCACCAGGATGTTGTCCACACAGTACACGTGCACAAACTCCTTGGCGCCACAGTCTaGGCCCTGCAACACACAGAA +
Preference number: 4 (lower is better)
Translates to: RVRQPHQDVVHTVHVHKLLGATV*ALQHTE
Trigger: TTCTGTGTGTTGCAGGGCGCAGACTGTGGCGCCAAG...GAGTTTGTGCACGTGTACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCTGTCGGCTGGCTCTaGGTTCTTCAGTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLPVGWL*VLQWGK
Trigger: TTTTCCCCACTGAAGAACGCAGAGCCAGCCGACAGG...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAAGGTCCCAAGTCCCTCTaGCTCTTGACTAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVEGPKSL*LLTRPH
Trigger: GTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACC...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCCCTCATTCTGGTTCTaGATCTGTAGGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGPSFWF*ICRLQK
Trigger: CTTCTGCAGCCTACAGATGCAGAACCAGAATGAGGG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTGGGATGCCCCAGCCTTaGCCCCATTACTGGTTCGTC +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCGMPQP*PHYWFV
Trigger: GACGAACCAGTAATGGGGGCAAGGCTGGGGCATCCC...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCACCAAATATGGAGGCTaGGTCCTCACTCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLTKYGG*VLTRRA
Trigger: GGCTCTCCGAGTGAGGACGCAGCCTCCATATTTGGT...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGCCAGCCATGCCTGAGTaGACCAAATATGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQPAMPE*TKYGGC
Trigger: GCAGCCTCCATATTTGGTGCACTCAGGCATGGCTGG...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCATACAGAACATTAAGATaGCAGCAACCGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAYRTLR*QQPARR
Trigger: GCGCCGGGCCGGTTGCTGGCATCTTAATGTTCTGTA...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGATTTTGGGCCGGTTCTaGGCAATGTCCCGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQILGRF*AMSRSV
Trigger: CACAGACCGGGACATTGCCCAGAACCGGCCCAAAAT...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR CCA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCATGCCGTCTGGGGCCATaGCAACTTTGTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQACRLGP*QLCLSA
Trigger: AGCGGAAAGACAAAGTTGCCATGGCCCCAGACGGCA...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CACAAACTCCACTCCCCGGCGCTCCATGTCCTCCAGGATCTTGTGGTCCTCCAGTGCCGTCTGGGGCCATaGCAACTTTGTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: HKLHSPALHVLQDLVVLQCRLGP*QLCLSA
Trigger: AGCGGAAAGACAAAGTTGCCATGGCCCCAGACGGCA...CTGGAGGACCACAAGATCCTGGAGGACATGGAGCGCCGGGGAGTGGAGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGCCCCCGTTGCCGTCTaGGGCCATGGCAACTTTGTC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGAPVAV*GHGNFV
Trigger: GACAAAGTTGCCATGGCCCCAGACGGCAACGGGGGC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACCTTTTCCACCACCTTaGCGCCACAGTCTGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAPFPPP*RHSLRP
Trigger: AGGGCGCAGACTGTGGCGCCAAGGTGGTGGAAAAGG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGCTGTACTCCACCACCTaGGGGACACCGTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGLYSTT*GTPSTW
Trigger: CCAGGTGGACGGTGTCCCCCAGGTGGTGGAGTACAG...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCTTCACAGCCACGTGTaGCTTCAGCAAAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGLHSHV*LQQRLK
Trigger: TTTGAGCCTTTGCTGAAGCCACACGTGGCTGTGAAG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCCATTTGGGGGCAAGCTaGGCAGCTCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCHLGAS*AALGAR
Trigger: CCTGGCTCCCAGAGCTGCCCAGCTTGCCCCCAAATG...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCATGCGGCTCCCTGGCCTaGTCTTCATCCAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWACGSLA*SSSRMS
Trigger: GCTCATCCTGGATGAAGACCAGGCCAGGGAGCCGCA...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGCAGCTGCGGCTCCCTaGCCTGGTCTTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGAAAAP*PGLHPG
Trigger: TCCTGGATGAAGACCAGGCCAGGGAGCCGCAGCTGC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCAGTCTGGGGACAGTCTaGGCGGGTCAGGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCSLGTV*AGQDSC
Trigger: GCAGGAGTCCTGACCCGCCCAGACTGTCCCCAGACT...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGTTGTCCCCCTCATTCTaGTTCTGCATCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGELSPSF*FCICRL
Trigger: CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAA...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTGAGCCACCTGGATCATaGACATCAGGCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGEPPGS*TSGSFC
Trigger: ACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTC...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCCCAGGGGAAGAACCCTaGGGCAGCTGGCTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCPGEEP*GSWLVP
Trigger: TGGGACAAGCCAGCTGCCCCAGGGTTCTTCCCCTGG...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGTGCGGTCTCAGGACTaGTCTCGCTGTACTCCACCA +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLVRSQD*SRCTPP
Trigger: TGGTGGAGTACAGCGAGATCAGTCCTGAGACCGCAC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGAGAGCCAGGCAGCCTaGGCACCAAGATCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGESQAA*APRSVR
Trigger: TCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGTGCCACTGCCTCCCCTaGGATGAGAAAGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGCHCLP*DEKAGE
Trigger: CTCGCCTGCTTTCTCATCTCAGGGGAGGCAGTGGCA...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCCGAATCCGCTCCGCCTaGAGCTGGTACAGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCRIRSA*SWYRVF
Trigger: GAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCG...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CAGGATAACCTTGCCATCAAAGGTCACAGCAGGCAGCAGGCGCTGCTCAAACATAGTAGAGGCCCCCGTTaGCGTCTGGGGCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: QDNLAIKGHSRQQALLKHSRGPR*RLGPWQ
Trigger: TTGCCATGGCCCCAGACGGCAACGGGGGCCTCTACT...ATGTTTGAGCAGCGCCTGCTGCCTGCTGTGACCTTTGATGGCAAGGTTATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR GCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACCACAGTCTGCGCCCTaGAACACACAGAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAPQSAP*NTQKPM
Trigger: CATCGGCTTCTGTGTGTTGCAGGGCGCAGACTGTGG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACTTGGCGCCACAGTCTaGGCCCTGCAACACACAGAA +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWALGATV*ALQHTE
Trigger: TTCTGTGTGTTGCAGGGCGCAGACTGTGGCGCCAAG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGGGCTCCTCGGGGTATaGCTTTTCCACCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGGLLGV*LFHHLG
Trigger: GCCAAGGTGGTGGAAAAGGCATACCCCGAGGAGCCC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCTGGAACTCCCGGCCTTaGAGGTACACTTCTAAACCC +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLWNSRP*RYTSKP
Trigger: GGGTTTAGAAGTGTACCTGCAAGGCCGGGAGTTCCA...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCGGGATGCCCCAGCCTTaGCCCCATTACTGGTTCGTC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCGMPQP*PHYWFV
Trigger: GACGAACCAGTAATGGGGGCAAGGCTGGGGCATCCC...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCATTGGCGGGGTCCAGGTaGAAGAAGTTGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWALAGSR*KKLCSL
Trigger: CAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAA...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGTGCGGCTCCCTGGCCTaGTCTTCATCCAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGCGSLA*SSSRMS
Trigger: GCTCATCCTGGATGAAGACCAGGCCAGGGAGCCGCA...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGTGCAGGCTGGAAGCATaGGGCAGGCTGCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGCRLEA*GRLLSH
Trigger: GTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCA...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGAGGCCCTGCCCTCGTaGAGTCTACCAGCATGTTTC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLEALPS*SLPACF
Trigger: GAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCATCAGGCTCTTTCTGTaGCCTTGCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSIRLFL*PCWASR
Trigger: CCTGGATGCCCAGCAAGGCCACAGAAAGAGCCTGAT...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 72 bp GCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAATaGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: AKEEGAALEWVE*SPSFWFCICRL
Trigger: CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGTGTCCCAGCCATGCCTaGGTGCACCAAATATGGAGG +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLCPSHA*VHQIWR
Trigger: CCTCCATATTTGGTGCACTCAGGCATGGCTGGGACA...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGCTGCCTCCCCTGAGATaGGAAAGCAGGCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLLPPLR*ESRRES
Trigger: TGATTCTCGCCTGCTTTCTCATCTCAGGGGAGGCAG...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCTTCCAGTCATGGCCATaGGGAACAGCTATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLFQSWP*GTAMRR
Trigger: CCTTCTCATAGCTGTTCCTCATGGCCATGACTGGAA...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTGGGCCCCAGAGTGAACTCGCTGAGGTGGAAGAAGTTGTaGTCCCTGAAGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: KKLCSLKNSAVGPRVNSLRWKKL*SLKNSA
Trigger: GGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCT...CAGCGAGTTCACTCTGGGGCCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR GCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCGCAGGCAGCAGGCGCTaGTCAAACATGACCACGTTG +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCAGSRR*SNMTTL
Trigger: CAACGTGGTCATGTTTGAGCAGCGCCTGCTGCCTGC...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCCACACAGTACACGTaGACAAACTCCACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCSTQYT*TNSTPR
Trigger: CCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGA...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCGTTGCAGATGTTGCCTaGATTGTACAGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSVADVA*IVQQAP
Trigger: GGGAGCCTGCTGTACAATGCAGGCAACATCTGCAAC...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGCCTGTCGGCTGGCTCTaGGTTCTTCAGTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLPVGWL*VLQWGK
Trigger: TTTTCCCCACTGAAGAACGCAGAGCCAGCCGACAGG...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACCAGCCATGCCTGAGTaGACCAAATATGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAPAMPE*TKYGGC
Trigger: GCAGCCTCCATATTTGGTGCACTCAGGCATGGCTGG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCAGGCACAGCATGGTTTaGAGTAAGAAGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSRHSMV*SKKGRA
Trigger: GGCTCTGCCCTTCTTACTGCAAACCATGCTGTGCCT...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGTACAGAACATTAAGATaGCAGCAACCGGCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLYRTLR*QQPARR
Trigger: GCGCCGGGCCGGTTGCTGGCATCTTAATGTTCTGTA...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCGCGATATCTCACAGATaGCCGGAGGGTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSAISHR*PEGLHL
Trigger: CAAATGGAGACCCTCCGGCCATCTGTGAGATATCGC...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGCTTCTAGTGCTCGGTaGGGTGTGGTGGATCCACAA +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLASSAR*GVVDPQ
Trigger: TTGTGGATCCACCACACCCCACCGAGCACTAGAAGC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGATCAGGCTCTTTCTGTaGCCTTGCTGGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLIRLFL*PCWASR
Trigger: CCTGGATGCCCAGCAAGGCCACAGAAAGAGCCTGAT...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGAGCCACCTGGATCATaGACATCAGGCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLEPPGS*TSGSFC
Trigger: ACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTATGAGTTGGCAGCAGTaGCATATCATAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGMSWQQ*HIIALF
Trigger: GAAGAGAGCTATGATATGCCACTGCTGCCAACTCAT...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGGGGCAGAGGATGAGTTaGCAGCAGTGGCATATCATA +
Preference number: 4 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQGQRMS*QQWHII
Trigger: TATGATATGCCACTGCTGCCAACTCATCCTCTGCCC...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAAAGATCGAGACCATCCTaGCTAACACGGTCAAACCCC +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVERSRPS*LTRSNP
Trigger: GGGGTTTGACCGTGTTAGCCAGGATGGTCTCGATCT...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 72 bp GCCATGGCAACTTTGTCTTTCCGCTCCAGGATAACCTaGCCATCAAAGGTCACAGCAGGCAGCAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AMATLSFRSRIT*PSKVTAGSRRC
Trigger: GCAGCGCCTGCTGCCTGCTGTGACCTTTGATGGCAAGGTTATCCTGGAGCGGAAAGACAAAGTTGCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR TCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCAGGTGCCTCTGACTCATaGAATCCCGGATTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWAGASDS*NPGLVS
Trigger: GCTGACTAATCCGGGATTTCATGAGTCAGAGGCACC...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGAGGTGGAAGAAGTTGTaGTCCCTGAAGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLRWKKL*SLKNSA
Trigger: GGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCT...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGGTTGCAGATGTTGCCTaGATTGTACAGCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLVADVA*IVQQAP
Trigger: GGGAGCCTGCTGTACAATGCAGGCAACATCTGCAAC...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAACCCTCATTCTGGTTCTaGATCTGTAGGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVEPSFWF*ICRLQK
Trigger: CTTCTGCAGCCTACAGATGCAGAACCAGAATGAGGG...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCACCAAATATGGAGGCTaGGTCCTCACTCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCTKYGG*VLTRRA
Trigger: GGCTCTCCGAGTGAGGACGCAGCCTCCATATTTGGT...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTGGCTTGTCCCAGCCATaGCTGAGTGCACCAAATATG +
Preference number: 4 (lower is better)
Translates to: ATGEALPSWSLPACFILCGLSQP*LSAPNM
Trigger: CATATTTGGTGCACTCAGGCATGGCTGGGACAAGCC...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGATCCCACTGGTTCTTaGGGAAGCACAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLDPTGS*GSTENS
Trigger: TGAGTTTTCTGTGCTTCCCCAAGAACCAGTGGGATC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCAAGATCGAGACCATCCTaGCTAACACGGTCAAACCCC +
Preference number: 4 (lower is better)
Translates to: LRATWIMDIRLFLWPCWARSRPS*LTRSNP
Trigger: GGGGTTTGACCGTGTTAGCCAGGATGGTCTCGATCT...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGTTCCAGTCATGGCCATaGGGAACAGCTATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLFQSWP*GTAMRR
Trigger: CCTTCTCATAGCTGTTCCTCATGGCCATGACTGGAA...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCTTGTTCAGAGAAATCTaGCGGAAACCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSLFREI*RKPSSS
Trigger: GGAGGAGGAAGGTTTCCGTCAGATTTCTCTGAACAA...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGCCTCGGGTGAAGAAGTaGTTGCAGATGTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGPRVKK*LQMLPA
Trigger: TGCAGGCAACATCTGCAACCACTTCTTCACCCGAGG...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCCTTCTCAGAGCCACCTaGATCATGGACATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCLLRAT*IMDIRL
Trigger: GAGCCTGATGTCCATGATCCAGGTGGCTCTGAGAAG...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAAGATCCCACTGGTTCTTaGGGAAGCACAGAAAACTCA +
Preference number: 4 (lower is better)
Translates to: PITGSSAKEEGAALEWVEDPTGS*GSTENS
Trigger: TGAGTTTTCTGTGCTTCCCCAAGAACCAGTGGGATC...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
3UTR CAA 72 bp CGGATTAGTCAGCAACCATCACAGAGGCCGCCGGCATaGATCCCACTGGTTCTTGGGGAAGCACAGAAAACT +
Preference number: 4 (lower is better)
Translates to: RISQQPSQRPPA*IPLVLGEAQKT
Trigger: AGTTTTCTGTGCTTCCCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGAGTGGTTGCAGATGTTaGCTGCATTGTACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGSGCRC*LHCTAG
Trigger: GCCTGCTGTACAATGCAGGCAACATCTGCAACCACT...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCTTTCATTCTGTGTTCTaGAGGCTGGAAGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: RRGPALVESTSMFHSVFCFHSVF*RLEAWG
Trigger: GCCCCATGCTTCCAGCCTGCAGAACACAGAATGAAA...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCTGTGTTCTGCAGGCTaGAAGCATGGGGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPALCSAG*KHGAGC
Trigger: GCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGGAAACCAATGGGGATaGGTAGTGGCCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPAGNQWG*VVALHW
Trigger: CCAGTGGAGGGCCACTACTCATCCCCATTGGTTTCC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCCACAGTCTGCGCCCTaGAACACACAGAAGCCGATG +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPAPQSAP*NTQKPM
Trigger: CATCGGCTTCTGTGTGTTGCAGGGCGCAGACTGTGG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGGTCCCAAGTCCCTCTaGCTCTTGACTAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPAGPKSL*LLTRPH
Trigger: GTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR TCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCTGCCTCCCCTGAGATaGGAAAGCAGGCGAGAATCA +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPALPPLR*ESRRES
Trigger: TGATTCTCGCCTGCTTTCTCATCTCAGGGGAGGCAG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCTCTTTCTGTGGCCTTaGTGGGCATCCAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPALFLWP*WASRVC
Trigger: ACACACCCTGGATGCCCAGCAAGGCCACAGAAAGAG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGATGAGTTGGCAGCAGTaGCATATCATAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGMSWQQ*HIIALF
Trigger: GAAGAGAGCTATGATATGCCACTGCTGCCAACTCAT...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGGCTTGTCCCAGCCATaGCTGAGTGCACCAAATATG +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPAGLSQP*LSAPNM
Trigger: CATATTTGGTGCACTCAGGCATGGCTGGGACAAGCC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTAGGCACAGCATGGTTTaGAGTAAGAAGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPARHSMV*SKKGRA
Trigger: GGCTCTGCCCTTCTTACTGCAAACCATGCTGTGCCT...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCCTCGGGTGAAGAAGTaGTTGCAGATGTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPAPRVKK*LQMLPA
Trigger: TGCAGGCAACATCTGCAACCACTTCTTCACCCGAGG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCGTAAACATCATCTTCTaGGCTTTGGTTTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: AYAASSARWGVVDPQGGLVNIIF*ALVSKI
Trigger: GATTTTTGAAACCAAAGCCCAGAAGATGATGTTTAC...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR GCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTAGTGGTTGCAGATGTTaGCTGCATTGTACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPASGCRC*LHCTAG
Trigger: GCCTGCTGTACAATGCAGGCAACATCTGCAACCACT...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCTTCACAGCCACGTGTaGCTTCAGCAAAGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPALHSHV*LQQRLK
Trigger: TTTGAGCCTTTGCTGAAGCCACACGTGGCTGTGAAG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTTTGTCCCCCTCATTCTaGTTCTGCATCTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: IIFWALVSKITRCGPEPALSPSF*FCICRL
Trigger: CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAA...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CCA 90 bp GCCCTCGAGTGGGTGGAATTGTCCCCCTCATTCTGGTTCTGCATCTGTAGGCTGTCATCTTCTGGGCTTTaGTTTCAAAAATCACAAGGT +
Preference number: 4 (lower is better)
Translates to: ALEWVELSPSFWFCICRLSSSGL*FQKSQG
Trigger: ACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGA...CAGCCTACAGATGCAGAACCAGAATGAGGGGGACAATTCCACCCACTCGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp CGTGGCTCCGGCGCCAGCTCGGCCCAGAAGCGCAGGAGGTGCTCCTaGCCAGCGCGCTGCAGCCGGGCGCGCACGTCCTGCTCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: RGSGASSAQKRRRCS*PARCSRARTSCSEA
Trigger: GGCTTCGGAGCAGGACGTGCGCGCCCGGCTGCAGCGCGCTGGCCAGGAGCACCTCCTGCGCTTCTGGGCCGAGCTGGCGCCGGAGCCACG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409858.8
ENST00000476184.5
CDS TCA 90 bp CCAGGAAGCGGGCCCCGGCCCGCAGAGCCCACCGGTAGTGCTGGGTaGGCAGGGCCTGGCGAGCGGTGCGGGGACTGTCCCTGTCGGCTG +
Preference number: 5 (lower is better)
Translates to: PGSGPRPAEPTGSAG*AGPGERCGDCPCRL
Trigger: CAGCCGACAGGGACAGTCCCCGCACCGCTCGCCAGGCCCTGCTCACCCAGCACTACCGGTGGGCTCTGCGGGCCGGGGCCCGCTTCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS GCA 90 bp GCCAGCTCGGCCCAGAAGCGCAGGAGGTGCTCCTGGCCAGCGCGCTaGAGCCGGGCGCGCACGTCCTGCTCCGAAGCCATGTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ASSAQKRRRCSWPAR*SRARTSCSEAMSPL
Trigger: CAGCGGCGACATGGCTTCGGAGCAGGACGTGCGCGCCCGGCTGCAGCGCGCTGGCCAGGAGCACCTCCTGCGCTTCTGGGCCGAGCTGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS CCA 90 bp GGTAGGGCAGGCAGGACACACCAGGGGACGGTGCAGCGGGTCCCGTaGCGCTCACCGGCCAGCTGCTCCACCCGCCGAATCCGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: GRAGRTHQGTVQRVP*RSPASCSTRRIRSA
Trigger: GGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGTCCCCTGGTGTGTCCTGCCTGCCCTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS GCA 90 bp CACCAGGGGACGGTGCAGCGGGTCCCGTGGCGCTCACCGGCCAGCTaGTCCACCCGCCGAATCCGCTCCGCCTGCAGCTGGTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: HQGTVQRVPWRSPAS*STRRIRSACSWYRV
Trigger: GACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGTCCCCTGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS GCA 90 bp TACCAGGGGACGGTGCAGCGGGTCCCGTGGCGCTCACCGGCCAGCTaGTCCACCCGCCGAATCCGCTCCGCCTGCAGCTGGTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: YQGTVQRVPWRSPAS*STRRIRSACSWYRV
Trigger: GACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGTCCCCTGGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS GCA 90 bp TGGCGCTCACCGGCCAGCTGCTCCACCCGCCGAATCCGCTCCGCCTaGAGCTGGTACAGGGTCTTCCGGCTGGGCAGCCCCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: WRSPASCSTRRIRSA*SWYRVFRLGSPTRY
Trigger: GTACCGTGTGGGGCTGCCCAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp AACTCGCTGGTCATGACGTACCAGGGGACGGTGCAGCGGGTCCCGTaGCGCTCACCGGCCAGCTGCTCCACCCGCCGAATCCGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: NSLVMTYQGTVQRVP*RSPASCSTRRIRSA
Trigger: GGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGTCCCCTGGTACGTCATGACCAGCGAGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS GCA 90 bp CCCAGCAGCCATTTCCAGCAGCCGAAGGCCCAACCCTGGGACCCCTaGAGTGAGGGCCAAAGGCCCTGCGAGCCGCCCTGGCAACCTGGC +
Preference number: 5 (lower is better)
Translates to: PSSHFQQPKAQPWDP*SEGQRPCEPPWQPG
Trigger: GCCAGGTTGCCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGGTTGGGCCTTCGGCTGCTGGAAATGGCTGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp CCCTGGGACCCCTGCAGTGAGGGCCAAAGGCCCTGCGAGCCGCCCTaGCAACCTGGCCAGGAGACCTCTCCTAACCATGGGTGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: PWDPCSEGQRPCEPP*QPGQETSPNHGWGQ
Trigger: CTGCCCCCACCCATGGTTAGGAGAGGTCTCCTGGCCAGGTTGCCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS TCA 90 bp CAGAGTGAACTCGCTGGTCATGACGTACCTGCAAGGGAGGCGCGGTaGGCCGGCCGCGAGTACGCCTGGCCCTGCAGGCAGACGGGGCTC +
Preference number: 5 (lower is better)
Translates to: QSELAGHDVPAREAR*AGREYAWPCRQTGL
Trigger: GAGCCCCGTCTGCCTGCAGGGCCAGGCGTACTCGCGGCCGGCTCACCGCGCCTCCCTTGCAGGTACGTCATGACCAGCGAGTTCACTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS TCA 90 bp CAGCCATTTCCAGCAGCCGAAGGCCCAACCCTGGGACCCCTGCAGTaGGGGCCAAAGGCCCTGCGAGCCGCCCTGGCAACCTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QPFPAAEGPTLGPLQ*GPKALRAALATWPG
Trigger: TCCTGGCCAGGTTGCCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGGTTGGGCCTTCGGCTGCTGGAAATGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp TCACCGGCCAGCTGCTCCACCCGCCGAATCCGCTCCGCCTGCAGCTaGTACAGGGTCTTCCGGCTGGGCAGCCCCACACGGTACATACCC +
Preference number: 5 (lower is better)
Translates to: SPASCSTRRIRSACS*YRVFRLGSPTRYIP
Trigger: GGGTATGTACCGTGTGGGGCTGCCCAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS CCA 90 bp TGGCCCAATCCCAGCAGCCATTTCCAGCAGCCGAAGGCCCAACCCTaGGACCCCTGCAGTGAGGGCCAAAGGCCCTGCGAGCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: WPNPSSHFQQPKAQP*DPCSEGQRPCEPPW
Trigger: CCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGGTTGGGCCTTCGGCTGCTGGAAATGGCTGCTGGGATTGGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 90 bp CCGAAGGCCCAACCCTGGGACCCCTGCAGTGAGGGCCAAAGGCCCTaGGAGCCGCCCTGGCAACCTGGCCAGGAGACCTCTCCTAACCAT +
Preference number: 5 (lower is better)
Translates to: PKAQPWDPCSEGQRP*EPPWQPGQETSPNH
Trigger: ATGGTTAGGAGAGGTCTCCTGGCCAGGTTGCCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGGTTGGGCCTTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp CCCGCCGAATCCGCTCCGCCTGCAGCTGGTACAGGGTCTTCCGGCTaGGCAGCCCCACACGGTACATACCCTTGGGGTAGGTCACGCCCA +
Preference number: 5 (lower is better)
Translates to: PAESAPPAAGTGSSG*AAPHGTYPWGRSRP
Trigger: TGGGCGTGACCTACCCCAAGGGTATGTACCGTGTGGGGCTGCCCAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS GCA 90 bp TCCCTGGTCAACGCAGGCGGCTCTGGCCGGCAATCCGCAGCCACCTaGTGCCGCACACCTGGTGACCGCCTTAAGGAAGCCTCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SLVNAGGSGRQSAAT*CRTPGDRLKEASGE
Trigger: TTCACCCGAGGCTTCCTTAAGGCGGTCACCAGGTGTGCGGCAGCAGGTGGCTGCGGATTGCCGGCCAGAGCCGCCTGCGTTGACCAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp CGTAGCTGTGCGGTCTCAGGACTGATCTCGCTGTACTCCACCACCTaGGGGACACCGTCCACCTGGCACACCACGCCCACGGGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RSCAVSGLISLYSTT*GTPSTWHTTPTGSS
Trigger: CGAGGAGCCCGTGGGCGTGGTGTGCCAGGTGGACGGTGTCCCCCAGGTGGTGGAGTACAGCGAGATCAGTCCTGAGACCGCACAGCTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS-3UTR CAA 90 bp GCTTATGCAGCTTCTAGTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCGGTCTGTGCCGGGGTaGGGGCTCGCGTCTGGAGCG +
Preference number: 5 (lower is better)
Translates to: AYAASSARWGVVDPQGGLRSVPG*GLASGA
Trigger: CGCTCCAGACGCGAGCCCCAACCCCGGCACAGACCG...GAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCACTAGAAGCTGCATAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS TCA 90 bp ACAGCAGGCTCCCGTCGGAGGCACGTAGCTGTGCGGTCTCAGGACTaGTCTCGCTGTACTCCACCACCTGGGGGACACCGTCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: TAGSRRRHVAVRSQD*SRCTPPPGGHRPPG
Trigger: GCCAGGTGGACGGTGTCCCCCAGGTGGTGGAGTACAGCGAGATCAGTCCTGAGACCGCACAGCTACGTGCCTCCGACGGGAGCCTGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS GCA 90 bp CTGGTCAACGCAGGCGGCTCTGGCCGGCAATCCGCAGCCACCTGCTaGCGCACACCTGGTGACCGCCTTAAGGAAGCCTCGGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: LVNAGGSGRQSAATC*RTPGDRLKEASGEE
Trigger: TTCTTCACCCGAGGCTTCCTTAAGGCGGTCACCAGGTGTGCGGCAGCAGGTGGCTGCGGATTGCCGGCCAGAGCCGCCTGCGTTGACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp GAGCCGCCCTGGCAACCTGGCCAGGAGACCTCTCCTAACCATGGGTaGGGGCAGTGGAAGGTCCGGGAGGTGGCACTACTGTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: EPPWQPGQETSPNHG*GQWKVREVALLSSQ
Trigger: TTGGGAGGACAGTAGTGCCACCTCCCGGACCTTCCACTGCCCCCACCCATGGTTAGGAGAGGTCTCCTGGCCAGGTTGCCAGGGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 90 bp CCTTTGCAAGCTCAGGATCCATTCTCCACCCCGACCCATCAGCCGTaGCTGACCACAGCCACTCCTGACCACAGCCGCTGTGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PLQAQDPFSTPTHQP*LTTATPDHSRCGPG
Trigger: CCCTGGGCCACAGCGGCTGTGGTCAGGAGTGGCTGTGGTCAGGCACGGCTGATGGGTCGGGGTGGAGAATGGATCCTGAGCTTGCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCAGAGGCCGCCGGCATaGATCCCACTGGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGQRPPA*IPLVLG
Trigger: CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS TCA 90 bp CTGATCCGGGCAGGTGAGAGCTGGGCCAGGTTTCCAGTGACAGAGTaGAGGTCTGGTCCCATGGGCAGCAAGTCTAGGGAGGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LIRAGESWARFPVTE*RSGPMGSKSREEPP
Trigger: CGGGGGCTCCTCCCTAGACTTGCTGCCCATGGGACCAGACCTTCACTCTGTCACTGGAAACCTGGCCCAGCTCTCACCTGCCCGGATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp TGGCAACCTGGCCAGGAGACCTCTCCTAACCATGGGTGGGGGCAGTaGAAGGTCCGGGAGGTGGCACTACTGTCCTCCCAAGTCCACAGC +
Preference number: 5 (lower is better)
Translates to: WQPGQETSPNHGWGQ*KVREVALLSSQVHS
Trigger: GCTGTGGACTTGGGAGGACAGTAGTGCCACCTCCCGGACCTTCCACTGCCCCCACCCATGGTTAGGAGAGGTCTCCTGGCCAGGTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp GTGCTCGGTGGGGTGTGGTGGATCCACAAGGCGGGCTCCCAAAGGGACATGCCCAAGTCCCTCTGCCTCTaGACTAGACCCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLGGVWWIHKAGSQRDMPKSLCL*TRPHSQ
Trigger: CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTT...GGGCATGTCCCTTTGGGAGCCCGCCTTGTGGATCCACCACACCCCACCGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGACACCACACCTCCCTaGGGCCCCAACCCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQADTTPP*GPNPKP
Trigger: AGGCTTCGGGTTGGGGCCCAAGGGAGGTGTGGTGTC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp GCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGTGGGATGCCCCAGCCTaGCCCCCATTACTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: ARQPEHQDPSEAAGSWGEWDAPA*PPLLVR
Trigger: ACGAACCAGTAATGGGGGCAAGGCTGGGGCATCCCA...CTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS TCA 90 bp CCACCTTGGCGCCACAGTCTGCGCCCTGCAACACACAGAAGCCGATaGAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACACAGT +
Preference number: 5 (lower is better)
Translates to: PPWRHSLRPATHRSR*RQGPPAAPGCCPHS
Trigger: ACTGTGTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTGTTGCAGGGCGCAGACTGTGGCGCCAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS TCA 90 bp CTGGTCCCATGGGCAGCAAGTCTAGGGAGGAGCCCCCGCAGGTACTaGGTGTTTTTGCTCCTGAGACGCCAGGGATGGCCCAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: LVPWAASLGRSPRRY*VFLLLRRQGWPNPS
Trigger: GCTGGGATTGGGCCATCCCTGGCGTCTCAGGAGCAAAAACACTCAGTACCTGCGGGGGCTCCTCCCTAGACTTGCTGCCCATGGGACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 90 bp CCCTGCATCCCTGTGCCAAGTGCCAGGCACCATCAGCCACATCCCTaGCCAGGCAAACAAACTGGCAAGCCCCAGAGCAGAGGTAGCACC +
Preference number: 5 (lower is better)
Translates to: PCIPVPSARHHQPHP*PGKQTGKPQSRGST
Trigger: GGTGCTACCTCTGCTCTGGGGCTTGCCAGTTTGTTTGCCTGGGCAGGGATGTGGCTGATGGTGCCTGGCACTTGGCACAGGGATGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 90 bp CCCGCGGGGCCCTTGGCTCCCTCAAGCCTCTACTTCCCTACCAGCTaGGCCTCAGTTCCCACCACCAAAACTGAGAGAAGGAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PAGPLAPSSLYFPTS*ASVPTTKTERRKKG
Trigger: CCCCTTCTTCCTTCTCTCAGTTTTGGTGGTGGGAACTGAGGCGCAGCTGGTAGGGAAGTAGAGGCTTGAGGGAGCCAAGGGCCCCGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 90 bp TTACCCTCAGGGCCAAGAGCACCCTCTGGTCTTCTCCCTGAGACTTaGCCGCGGGGCCCTTGGCTCCCTCAAGCCTCTACTTCCCTACCA +
Preference number: 5 (lower is better)
Translates to: LPSGPRAPSGLLPET*PRGPWLPQASTSLP
Trigger: TGGTAGGGAAGTAGAGGCTTGAGGGAGCCAAGGGCCCCGCGGGCAAGTCTCAGGGAGAAGACCAGAGGGTGCTCTTGGCCCTGAGGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp ATTCTGTGTTCTGCAGGCTGGAAGCATGGGGCAGGCTGCTTTCCCACCCAGAGCGGGCCAGGCCCCATTTaGGGCCGGTTCTGGGCAATG +
Preference number: 5 (lower is better)
Translates to: ILCSAGWKHGAGCFPTQSGPGPI*GRFWAM
Trigger: CATTGCCCAGAACCGGCCCAAAATGGGGCCTGGCCC...GCTCTGGGTGGGAAAGCAGCCTGCCCCATGCTTCCAGCCTGCAGAACACAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS-3UTR CAA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTAGCCGCACCAGGATGTaGTCCACACAGTACACGTGC +
Preference number: 5 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGSRTRM*STQYTC
Trigger: GCACGTGTACTGTGTGGACAACATCCTGGTGCGGCT...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTCAGATGTTGCCTGCATaGTACAGCAGGCTCCCGTCG +
Preference number: 5 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGQMLPA*YSRLPS
Trigger: CGACGGGAGCCTGCTGTACAATGCAGGCAACATCTG...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCAGGCTGTCGCCACTaGTGTCCAGAGGCGACAGGA +
Preference number: 5 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAAGCRH*CPEATG
Trigger: TCCTGTCGCCTCTGGACACAAGTGGCGACAGCCTGC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp AGCTGCGGCTCCCTGGCCTGGTCTTCATCCAGGATGAGCGGGGACTaGAACTCCCGGCCTTGCAGGTACACTTCTAAACCCTCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SCGSLAWSSSRMSGD*NSRPCRYTSKPSPE
Trigger: CTCTGGAGAGGGTTTAGAAGTGTACCTGCAAGGCCGGGAGTTCCAGTCCCCGCTCATCCTGGATGAAGACCAGGCCAGGGAGCCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp AGACCTCTCCTAACCATGGGTGGGGGCAGTGGAAGGTCCGGGAGGTaGCACTACTGTCCTCCCAAGTCCACAGCCCCAAGGACTCCCTAT +
Preference number: 5 (lower is better)
Translates to: RPLLTMGGGSGRSGR*HYCPPKSTAPRTPY
Trigger: ATAGGGAGTCCTTGGGGCTGTGGACTTGGGAGGACAGTAGTGCCACCTCCCGGACCTTCCACTGCCCCCACCCATGGTTAGGAGAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 90 bp AGCTGCGGCTCCCTGGCCTGGTCTTCATCCAGGATGAGCGGGGACTaGAACTCCCGGCCTTGCAGGTACACTTCTAAACCCTGGAGACGA +
Preference number: 5 (lower is better)
Translates to: SCGSLAWSSSRMSGD*NSRPCRYTSKPWRR
Trigger: TCGTCTCCAGGGTTTAGAAGTGTACCTGCAAGGCCGGGAGTTCCAGTCCCCGCTCATCCTGGATGAAGACCAGGCCAGGGAGCCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAATGTCCTCCAGGATCTaGTGGTCCTCCAGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAMSSRI*WSSSAQ
Trigger: CTGCGCGCTGGAGGACCACAAGATCCTGGAGGACAT...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp CACACAGAAGCCGATGAAGACAGGGTCCGCCAGCCGCACCAGGATGTTGTCCACATGTCCTCCAGGATCTaGTGGTCCTCCAGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: HTEADEDRVRQPHQDVVHMSSRI*WSSSAQ
Trigger: CTGCGCGCTGGAGGACCACAAGATCCTGGAGGACAT...GTGGACAACATCCTGGTGCGGCTGGCGGACCCTGTCTTCATCGGCTTCTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CAA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTGCCTTTTCCACCACCTaGGCGCCACAGTCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: ATGEALPSWSLPACFILCAFSTT*APQSAP
Trigger: GGGCGCAGACTGTGGCGCCAAGGTGGTGGAAAAGGC...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp GCCGCACACCTGGTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTaGTTGCAGATGTTGCCTGCATTGTACAGCAGGCTCCCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AAHLVTALRKPRVKK*LQMLPALYSRLPSE
Trigger: CTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCACCAGGTGTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp GTTGGCGGGGTCCAGGTGGAAGAAGTTGTGCTCCCTGAAGAACTCGGCCGTGGGGGGGCCATGGCAACTTaGTCTTTCCGCTCCAGGATA +
Preference number: 5 (lower is better)
Translates to: VGGVQVEEVVLPEELGRGGAMAT*SFRSRI
Trigger: TATCCTGGAGCGGAAAGACAAAGTTGCCATGGCCCC...CCCACGGCCGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGACCCCGCCAAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CAA 90 bp CACAAACTCCACTCCCCGGCGCTCCATGTCCTCCAGGATCTTGTGGTCCTCCAGAGCCGCACCAGGATGTaGTCCACACAGTACACGTGC +
Preference number: 5 (lower is better)
Translates to: HKLHSPALHVLQDLVVLQSRTRM*STQYTC
Trigger: GCACGTGTACTGTGTGGACAACATCCTGGTGCGGCT...CTGGAGGACCACAAGATCCTGGAGGACATGGAGCGCCGGGGAGTGGAGTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CAA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGCCTTTTCCACCACCTaGGCGCCACAGTCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGAFSTT*APQSAP
Trigger: GGGCGCAGACTGTGGCGCCAAGGTGGTGGAAAAGGC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGAAGTCCCTCTGCCTCTaGACTAGACCCCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQKSLCL*TRPHSQ
Trigger: CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTT...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp CTCTCACCTCTCCAGAGTAAGACACCAAGGGCGATATCTCACAGATaGCCGGAGGGTCTCCATTTGGGGGCAAGCTGGGCAGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LSPLQSKTPRAISHR*PEGLHLGASWAALG
Trigger: TCCCAGAGCTGCCCAGCTTGCCCCCAAATGGAGACCCTCCGGCCATCTGTGAGATATCGCCCTTGGTGTCTTACTCTGGAGAGGTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp GAGGCCCCCGTTGCCGTCTGGGGCCATGGCAACTTTGTCTTTCCGCTCCAGGATTCCAGGTGGAAGAAGTaGTGCTCCCTGAAGAACTCG +
Preference number: 5 (lower is better)
Translates to: EAPVAVWGHGNFVFPLQDSRWKK*CSLKNS
Trigger: CGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGA...ATCCTGGAGCGGAAAGACAAAGTTGCCATGGCCCCAGACGGCAACGGGGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CAA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGGGGCCATGGCAACTTaGTCTTTCCGCTCCAGGATA +
Preference number: 5 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQAGAMAT*SFRSRI
Trigger: TATCCTGGAGCGGAAAGACAAAGTTGCCATGGCCCC...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp CCCATTACTGGTTCGTCTGCTAAGGAAGAGGGGGCAGCCCTCGAGTGGGTGGAAAGCCGCACCAGGATGTaGTCCACACAGTACACGTGC +
Preference number: 5 (lower is better)
Translates to: PITGSSAKEEGAALEWVESRTRM*STQYTC
Trigger: GCACGTGTACTGTGTGGACAACATCCTGGTGCGGCT...TTCCACCCACTCGAGGGCTGCCCCCTCTTCCTTAGCAGACGAACCAGTAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp GGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCAGCTGGGGTGAGGGGTAAGTGGTTGCAGATGTaGCCTGCATTGTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSLSTKIRQKQQAAGVRGKWLQM*PALYSR
Trigger: CCTGCTGTACAATGCAGGCAACATCTGCAACCACTT...ACCCCTCACCCCAGCTGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp CCCATTCTCCCAGGTCCCAAGTCCCTCTGCCTCTTGACTAGACCCCACAGCCAGCTCGAGTGGGTGGAATaGTCCCCCTCATTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: PILPGPKSLCLLTRPHSQLEWVE*SPSFWF
Trigger: GAACCAGAATGAGGGGGACAATTCCACCCACTCGAG...CTGGCTGTGGGGTCTAGTCAAGAGGCAGAGGGACTTGGGACCTGGGAGAATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGCAGAGGCCGCCGGCATaGATCCCACTGGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGQRPPA*IPLVLG
Trigger: CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTG...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp CTAAACCCTCTCCAGAGTAAGACACCAAGGGCGATATCTCACAGATaGCCGGAGGGTCTCCATTTGGGGGCAAGCTGGGCAGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LNPLQSKTPRAISHR*PEGLHLGASWAALG
Trigger: TCCCAGAGCTGCCCAGCTTGCCCCCAAATGGAGACCCTCCGGCCATCTGTGAGATATCGCCCTTGGTGTCTTACTCTGGAGAGGGTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp TCACTCGGAGAGCCAGGCAGCCTGAGCACCAAGATCCGTCAGAAGCAGCAGGCATCCAGGTGGAAGAAGTaGTGCTCCCTGAAGAACTCG +
Preference number: 5 (lower is better)
Translates to: SLGEPGSLSTKIRQKQQASRWKK*CSLKNS
Trigger: CGAGTTCTTCAGGGAGCACAACTTCTTCCACCTGGA...TGCCTGCTGCTTCTGACGGATCTTGGTGCTCAGGCTGCCTGGCTCTCCGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCAAACATGACCACGTaGGCGGGGTCCAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: ATGEALPSWSLPACFILCSNMTT*AGSRWK
Trigger: CTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGA...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGATGTCCTCCAGGATCTaGTGGTCCTCCAGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGMSSRI*WSSSAQ
Trigger: CTGCGCGCTGGAGGACCACAAGATCCTGGAGGACAT...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCTGGGATGCCCCAGCCTaGCCCCCATTACTGGTTCGT +
Preference number: 5 (lower is better)
Translates to: RRGPALVESTSMFHSVFCWDAPA*PPLLVR
Trigger: ACGAACCAGTAATGGGGGCAAGGCTGGGGCATCCCA...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp TCAAACTCCCTGGTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTaGTTGCAGATGTTGCCTGCATTGTACAGCAGGCTCCCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SNSLVTALRKPRVKK*LQMLPALYSRLPSE
Trigger: CTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCACCAGGGAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp CGCTGCTCAAACATGACCACGTTGGCGGGGTCCAGGTGGAAGAAGTTGTGCTCCCGCTCCAGGATAACCTaGCCATCAAAGGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: RCSNMTTLAGSRWKKLCSRSRIT*PSKVTA
Trigger: TGCTGTGACCTTTGATGGCAAGGTTATCCTGGAGCG...GGAGCACAACTTCTTCCACCTGGACCCCGCCAACGTGGTCATGTTTGAGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476184.5
CDS-3UTR CAA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTGGGGCCATGGCAACTTaGTCTTTCCGCTCCAGGATA +
Preference number: 5 (lower is better)
Translates to: ATGEALPSWSLPACFILCGAMAT*SFRSRI
Trigger: TATCCTGGAGCGGAAAGACAAAGTTGCCATGGCCCC...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCCAGATGTTGCCTGCATaGTACAGCAGGCTCCCGTCG +
Preference number: 5 (lower is better)
Translates to: RRGPALVESTSMFHSVFCQMLPA*YSRLPS
Trigger: CGACGGGAGCCTGCTGTACAATGCAGGCAACATCTG...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTCTCGAGTGGGTGGAATaGTCCCCCTCATTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: ATGEALPSWSLPACFILCLEWVE*SPSFWF
Trigger: GAACCAGAATGAGGGGGACAATTCCACCCACTCGAG...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS GCA 90 bp CTTGATCACAGAGCCTTACAGCAGCTGCCTGCTGAGCACGGCTTGTaGCTGATCTCCAGCACCTCTGCCTTTGCAAGCTCAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: LDHRALQQLPAEHGL*LISSTSAFASSGSI
Trigger: AATGGATCCTGAGCTTGCAAAGGCAGAGGTGCTGGAGATCAGGCACAAGCCGTGCTCAGCAGGCAGCTGCTGTAAGGCTCTGTGATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 90 bp GCAAATTTAAACCACCGACCCCATTGGTTAACCGAGGTAGAGCTGTaGCGTCTCCACCCGAGCAGCCACCTCTCCCCAGATGGTATTCCA +
Preference number: 5 (lower is better)
Translates to: ANLNHRPHWLTEVEL*RLHPSSHLSPDGIP
Trigger: TGGAATACCATCTGGGGAGAGGTGGCTGCTCGGGTGGAGACGGCACAGCTCTACCTCGGTTAACCAATGGGGTCGGTGGTTTAAATTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp CTCAGAGCCACCTGGATCATGGACATCAGGCTCTTTCTGTGGCCTTGCTGGGCACGCTCCAGGATAACCTaGCCATCAAAGGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: LRATWIMDIRLFLWPCWARSRIT*PSKVTA
Trigger: TGCTGTGACCTTTGATGGCAAGGTTATCCTGGAGCG...TGCCCAGCAAGGCCACAGAAAGAGCCTGATGTCCATGATCCAGGTGGCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp ATTCCCCTCCTCATCCACATACGGGACCTTCTTCACAGCCACGTGTaGCTTCAGCAAAGGCTCAAACTCCCTGGTGACCGCCTTAAGGAA +
Preference number: 5 (lower is better)
Translates to: IPLLIHIRDLLHSHV*LQQRLKLPGDRLKE
Trigger: TTCCTTAAGGCGGTCACCAGGGAGTTTGAGCCTTTGCTGAAGCCACACGTGGCTGTGAAGAAGGTCCCGTATGTGGATGAGGAGGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTGCAGGCTGTCGCCACTaGTGTCCAGAGGCGACAGGA +
Preference number: 5 (lower is better)
Translates to: IIFWALVSKITRCGPEPAAGCRH*CPEATG
Trigger: TCCTGTCGCCTCTGGACACAAGTGGCGACAGCCTGC...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGAAGTGGTTGCAGATGTaGCCTGCATTGTACAGCAGG +
Preference number: 5 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGKWLQM*PALYSR
Trigger: CCTGCTGTACAATGCAGGCAACATCTGCAACCACTT...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 90 bp CCATATCTTGGAAAGTCTTCTGCAAATTTAAACCACCGACCCCATTaGTTAACCGAGGTAGAGCTGTGCCGTCTCCACCCGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PYLGKSSANLNHRPH*LTEVELCRLHPSSH
Trigger: GTGGCTGCTCGGGTGGAGACGGCACAGCTCTACCTCGGTTAACCAATGGGGTCGGTGGTTTAAATTTGCAGAAGACTTTCCAAGATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS-3UTR CAA 90 bp ATCATCTTCTGGGCTTTGGTTTCAAAAATCACAAGGTGTGGGCCTGAGCCTGCTCGCTCCAGGATAACCTaGCCATCAAAGGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: IIFWALVSKITRCGPEPARSRIT*PSKVTA
Trigger: TGCTGTGACCTTTGATGGCAAGGTTATCCTGGAGCG...AGCAGGCTCAGGCCCACACCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp GCGACAGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTATCATCTTCTGGGCTTaGGTTTCAAAAATCACAAGG +
Preference number: 5 (lower is better)
Translates to: ATGEALPSWSLPACFILCIIFWA*VSKITR
Trigger: CCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT...ACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCTGTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp AGGAGAGGCCCTGCCCTCGTGGAGTCTACCAGCATGTTTCATTCTGTGTTCTGCATCATCTTCTGGGCTTaGGTTTCAAAAATCACAAGG +
Preference number: 5 (lower is better)
Translates to: RRGPALVESTSMFHSVFCIIFWA*VSKITR
Trigger: CCTTGTGATTTTTGAAACCAAAGCCCAGAAGATGAT...GCAGAACACAGAATGAAACATGCTGGTAGACTCCACGAGGGCAGGGCCTCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS-3UTR CAA 90 bp ATTAGTCAGCAACCATCACAGAGGCCGCCGGCATTGATCCCACTGGTTCTTGGGGTCAATTACGGCACCTaGTGTTTATTGGAAATATTC +
Preference number: 5 (lower is better)
Translates to: ISQQPSQRPPALIPLVLGVNYGT*CLLEIF
Trigger: GAATATTTCCAATAAACACAAGGTGCCGTAATTGAC...CCCAAGAACCAGTGGGATCAATGCCGGCGGCCTCTGTGATGGTTGCTGACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS GCA 72 bp CTTCCTCCTCCCAGCGCCGCCGTGTCTCGGGGTCGCTaGGGCTGGCCCTGCCCACGCGCTCTGGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LPPPSAAVSRGR*GWPCPRALGAG
Trigger: CCCTGCCCCCAGAGCGCGTGGGCAGGGCCAGCCGCAGCGACCCCGAGACACGGCGGCGCTGGGAGGAGGAAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409858.8
ENST00000476184.5
CDS GCA 72 bp ACGGTGCAGCGGGTCCCGTGGCGCTCACCGGCCAGCTaGTCCACCCGCCGAATCCGCTCCGCCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TVQRVPWRSPAS*STRRIRSACSW
Trigger: CCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 72 bp GGGACCCCGCGGGTCCCTGGTCAACGCAGGCGGCTCTaGCCGGCAATCCGCAGCCACCTGCTGCCGCACACC +
Preference number: 6 (lower is better)
Translates to: GTPRVPGQRRRL*PAIRSHLLPHT
Trigger: GGTGTGCGGCAGCAGGTGGCTGCGGATTGCCGGCCAGAGCCGCCTGCGTTGACCAGGGACCCGCGGGGTCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp CCGGCCAGCTGCTCCACCCGCCGAATCCGCTCCGCCTaGAGCTGGTACAGGGTCTTCCGGCTGGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: PASCSTRRIRSA*SWYRVFRLGSP
Trigger: GGGGCTGCCCAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCTGGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS GCA 72 bp GCCCAGAAGCGCAGGAGGTGCTCCTGGCCAGCGCGCTaGAGCCGGGCGCGCACGTCCTGCTCCGAAGCCATG +
Preference number: 6 (lower is better)
Translates to: AQKRRRCSWPAR*SRARTSCSEAM
Trigger: CATGGCTTCGGAGCAGGACGTGCGCGCCCGGCTGCAGCGCGCTGGCCAGGAGCACCTCCTGCGCTTCTGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409858.8
ENST00000476184.5
CDS CCA 72 bp GGCAGGACACACCAGGGGACGGTGCAGCGGGTCCCGTaGCGCTCACCGGCCAGCTGCTCCACCCGCCGAATC +
Preference number: 6 (lower is better)
Translates to: GRTHQGTVQRVP*RSPASCSTRRI
Trigger: GATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGTCCCCTGGTGTGTCCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS CCA 72 bp CCAGGGCACTCAGCTCACTGGGACCCCGCGGGTCCCTaGTCAACGCAGGCGGCTCTGGCCGGCAATCCGCAG +
Preference number: 6 (lower is better)
Translates to: PGHSAHWDPAGP*STQAALAGNPQ
Trigger: CTGCGGATTGCCGGCCAGAGCCGCCTGCGTTGACCAGGGACCCGCGGGGTCCCAGTGAGCTGAGTGCCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp GACCACAGCCGCTGTGGCCCAGGGCACTCAGCTCACTaGGACCCCGCGGGTCCCTGGTCAACGCAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: DHSRCGPGHSAH*DPAGPWSTQAA
Trigger: AGCCGCCTGCGTTGACCAGGGACCCGCGGGGTCCCAGTGAGCTGAGTGCCCTGGGCCACAGCGGCTGTGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS TCA 72 bp CTCGCTGGTCATGACGTACCTGCAAGGGAGGCGCGGTaGGCCGGCCGCGAGTACGCCTGGCCCTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LAGHDVPAREAR*AGREYAWPCRQ
Trigger: CTGCCTGCAGGGCCAGGCGTACTCGCGGCCGGCTCACCGCGCCTCCCTTGCAGGTACGTCATGACCAGCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360271.3
CDS CCA 72 bp AGCTGCTCCACCCGCCGAATCCGCTCCGCCTGCAGCTaGTACAGGGTCTTCCGGCTGGGCAGCCCCACACGG +
Preference number: 6 (lower is better)
Translates to: SCSTRRIRSACS*YRVFRLGSPTR
Trigger: CCGTGTGGGGCTGCCCAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCGGATTCGGCGGGTGGAGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS CCA 72 bp GTCATGACGTACCAGGGGACGGTGCAGCGGGTCCCGTaGCGCTCACCGGCCAGCTGCTCCACCCGCCGAATC +
Preference number: 6 (lower is better)
Translates to: VMTYQGTVQRVP*RSPASCSTRRI
Trigger: GATTCGGCGGGTGGAGCAGCTGGCCGGTGAGCGCCACGGGACCCGCTGCACCGTCCCCTGGTACGTCATGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS GCA 72 bp GCAGGCGGCTCTGGCCGGCAATCCGCAGCCACCTGCTaGCGCACACCTGGTGACCGCCTTAAGGAAGCCTCG +
Preference number: 6 (lower is better)
Translates to: AGGSGRQSAATC*RTPGDRLKEAS
Trigger: CGAGGCTTCCTTAAGGCGGTCACCAGGTGTGCGGCAGCAGGTGGCTGCGGATTGCCGGCCAGAGCCGCCTGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp CAACCCTGGGACCCCTGCAGTGAGGGCCAAAGGCCCTaGGAGCCGCCCTGGCAACCTGGCCAGGAGACCTCT +
Preference number: 6 (lower is better)
Translates to: QPWDPCSEGQRP*EPPWQPGQETS
Trigger: AGAGGTCTCCTGGCCAGGTTGCCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp CATTTCCAGCAGCCGAAGGCCCAACCCTGGGACCCCTaGAGTGAGGGCCAAAGGCCCTGCGAGCCGCCCTGG +
Preference number: 6 (lower is better)
Translates to: HFQQPKAQPWDP*SEGQRPCEPPW
Trigger: CCAGGGCGGCTCGCAGGGCCTTTGGCCCTCACTGCAGGGGTCCCAGGGTTGGGCCTTCGGCTGCTGGAAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp TCGCTGTACTCCACCACCTGGGGGACACCGTCCACCTaGCACACCACGCCCACGGGCTCCTCGGGGTATGCC +
Preference number: 6 (lower is better)
Translates to: SLYSTTWGTPST*HTTPTGSSGYA
Trigger: GGCATACCCCGAGGAGCCCGTGGGCGTGGTGTGCCAGGTGGACGGTGTCCCCCAGGTGGTGGAGTACAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS GCA 72 bp CACCTGGCACACCACGCCCACGGGCTCCTCGGGGTATaGCTTTTCCACCACCTTGGCGCCACAGTCTGCGCC +
Preference number: 6 (lower is better)
Translates to: HLAHHAHGLLGV*LFHHLGATVCA
Trigger: GGCGCAGACTGTGGCGCCAAGGTGGTGGAAAAGGCATACCCCGAGGAGCCCGTGGGCGTGGTGTGCCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS GCA 72 bp AACGCAGGCGGCTCTGGCCGGCAATCCGCAGCCACCTaGTGCCGCACACCTGGTGACCGCCTTAAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: NAGGSGRQSAAT*CRTPGDRLKEA
Trigger: GGCTTCCTTAAGGCGGTCACCAGGTGTGCGGCAGCAGGTGGCTGCGGATTGCCGGCCAGAGCCGCCTGCGTT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp GCGGTCTCAGGACTGATCTCGCTGTACTCCACCACCTaGGGGACACCGTCCACCTGGCACACCACGCCCACG +
Preference number: 6 (lower is better)
Translates to: AVSGLISLYSTT*GTPSTWHTTPT
Trigger: CGTGGGCGTGGTGTGCCAGGTGGACGGTGTCCCCCAGGTGGTGGAGTACAGCGAGATCAGTCCTGAGACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CCA 72 bp TCCGCTCCGCCTGCAGCTGGTACAGGGTCTTCCGGCTaGGCAGCCCCACACGGTACATACCCTTGGGGTAGG +
Preference number: 6 (lower is better)
Translates to: SAPPAAGTGSSG*AAPHGTYPWGR
Trigger: CCTACCCCAAGGGTATGTACCGTGTGGGGCTGCCCAGCCGGAAGACCCTGTACCAGCTGCAGGCGGAGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409858.8
CDS CCA 72 bp TGTCCTCCCTCCGCAAGGCCCCCACCAAGGCCTGACTaGCCCCACACTGGGCTCAGACCTGGGCTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: CPPSARPPPRPD*PHTGLRPGLSH
Trigger: ATGAGACAGCCCAGGTCTGAGCCCAGTGTGGGGCCAGTCAGGCCTTGGTGGGGGCCTTGCGGAGGGAGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp GGGCCAAGAGCACCCTCTGGTCTTCTCCCTGAGACTTaGCCGCGGGGCCCTTGGCTCCCTCAAGCCTCTACT +
Preference number: 6 (lower is better)
Translates to: GPRAPSGLLPET*PRGPWLPQAST
Trigger: AGTAGAGGCTTGAGGGAGCCAAGGGCCCCGCGGGCAAGTCTCAGGGAGAAGACCAGAGGGTGCTCTTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS TCA 72 bp TCCCGTCGGAGGCACGTAGCTGTGCGGTCTCAGGACTaGTCTCGCTGTACTCCACCACCTGGGGGACACCGT +
Preference number: 6 (lower is better)
Translates to: SRRRHVAVRSQD*SRCTPPPGGHR
Trigger: ACGGTGTCCCCCAGGTGGTGGAGTACAGCGAGATCAGTCCTGAGACCGCACAGCTACGTGCCTCCGACGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS TCA 72 bp CCCACGTCCCAGCACAGAGGCCCTGATCCGGGCAGGTaGGAGCTGGGCCAGGTTTCCAGTGACAGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: PTSQHRGPDPGR*ELGQVSSDRVK
Trigger: CTTCACTCTGTCACTGGAAACCTGGCCCAGCTCTCACCTGCCCGGATCAGGGCCTCTGTGCTGGGACGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS TCA 72 bp AAAGGGCTAGTCACCCACGTCCCAGCACAGAGGCCCTaGTCCGGGCAGGTGAGAGCTGGGCCAGGTTTCCAG +
Preference number: 6 (lower is better)
Translates to: KGLVTHVPAQRP*SGQVRAGPGFQ
Trigger: CTGGAAACCTGGCCCAGCTCTCACCTGCCCGGATCAGGGCCTCTGTGCTGGGACGTGGGTGACTAGCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp GCTCAGGATCCATTCTCCACCCCGACCCATCAGCCGTaGCTGACCACAGCCACTCCTGACCACAGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: AQDPFSTPTHQP*LTTATPDHSRC
Trigger: ACAGCGGCTGTGGTCAGGAGTGGCTGTGGTCAGGCACGGCTGATGGGTCGGGGTGGAGAATGGATCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp CTAACCATGGGTGGGGGCAGTGGAAGGTCCGGGAGGTaGCACTACTGTCCTCCCAAGTCCACAGCCCCAAGG +
Preference number: 6 (lower is better)
Translates to: LTMGGGSGRSGR*HYCPPKSTAPR
Trigger: CCTTGGGGCTGTGGACTTGGGAGGACAGTAGTGCCACCTCCCGGACCTTCCACTGCCCCCACCCATGGTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp TGGCAACCTGGCCAGGAGACCTCTCCTAACCATGGGTaGGGGCAGTGGAAGGTCCGGGAGGTGGCACTACTG +
Preference number: 6 (lower is better)
Translates to: WQPGQETSPNHG*GQWKVREVALL
Trigger: CAGTAGTGCCACCTCCCGGACCTTCCACTGCCCCCACCCATGGTTAGGAGAGGTCTCCTGGCCAGGTTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS TCA 72 bp CAGATATGGCACCGCTGGGGGCTCTGTCCCCACTTCTaGGCACACCCAGCTGGGTGGGACAGGATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: QIWHRWGLCPHF*AHPAGWDRMAE
Trigger: TTCTGCCATCCTGTCCCACCCAGCTGGGTGTGCTCAGAAGTGGGGACAGAGCCCCCAGCGGTGCCATATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS TCA 72 bp TGGGCAGCAAGTCTAGGGAGGAGCCCCCGCAGGTACTaGGTGTTTTTGCTCCTGAGACGCCAGGGATGGCCC +
Preference number: 6 (lower is better)
Translates to: WAASLGRSPRRY*VFLLLRRQGWP
Trigger: GGGCCATCCCTGGCGTCTCAGGAGCAAAAACACTCAGTACCTGCGGGGGCTCCTCCCTAGACTTGCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CAA 72 bp GAGACGAGCAGGGGACAATGGCCAAGTACCCACCTTTaGGCGGGTCACAGCCCCTCTGGCCACACCAAGAGC +
Preference number: 6 (lower is better)
Translates to: ETSRGQWPSTHL*AGHSPSGHTKS
Trigger: GCTCTTGGTGTGGCCAGAGGGGCTGTGACCCGCCAAAAGGTGGGTACTTGGCCATTGTCCCCTGCTCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp CCTGTGCCAAGTGCCAGGCACCATCAGCCACATCCCTaGCCAGGCAAACAAACTGGCAAGCCCCAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: PVPSARHHQPHP*PGKQTGKPQSR
Trigger: TCTGCTCTGGGGCTTGCCAGTTTGTTTGCCTGGGCAGGGATGTGGCTGATGGTGCCTGGCACTTGGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp AACCACCGACCCCATTGGTTAACCGAGGTAGAGCTGTaGCGTCTCCACCCGAGCAGCCACCTCTCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: NHRPHWLTEVEL*RLHPSSHLSPD
Trigger: ATCTGGGGAGAGGTGGCTGCTCGGGTGGAGACGGCACAGCTCTACCTCGGTTAACCAATGGGGTCGGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS GCA 72 bp GGGGTATGCCTTTTCCACCACCTTGGCGCCACAGTCTaGGCCCTGCAACACACAGAAGCCGATGAAGACAGG +
Preference number: 6 (lower is better)
Translates to: GVCLFHHLGATV*ALQHTEADEDR
Trigger: CCTGTCTTCATCGGCTTCTGTGTGTTGCAGGGCGCAGACTGTGGCGCCAAGGTGGTGGAAAAGGCATACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS GCA 72 bp GCACGGCTTGTGCCTGATCTCCAGCACCTCTGCCTTTaGAAGCTCAGGATCCATTCTCCACCCCGACCCATC +
Preference number: 6 (lower is better)
Translates to: ARLVPDLQHLCL*KLRIHSPPRPI
Trigger: GATGGGTCGGGGTGGAGAATGGATCCTGAGCTTGCAAAGGCAGAGGTGCTGGAGATCAGGCACAAGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp TCCCTGGCCTGGTCTTCATCCAGGATGAGCGGGGACTaGAACTCCCGGCCTTGCAGGTACACTTCTAAACCC +
Preference number: 6 (lower is better)
Translates to: SLAWSSSRMSGD*NSRPCRYTSKP
Trigger: GGGTTTAGAAGTGTACCTGCAAGGCCGGGAGTTCCAGTCCCCGCTCATCCTGGATGAAGACCAGGCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CAA 90 bp GCACACCTGGTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTGGTaGCAGATGTTGCCTGCATTGTACAGCAGGCTCCCGTCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: AHLVTALRKPRVKKW*QMLPALYSRLPSEA
Trigger: TGCCTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCACCAGGTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CAA 90 bp GTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTGGTTGCAGATGTaGCCTGCATTGTACAGCAGGCTCCCGTCGGAGGCACGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: VTALRKPRVKKWLQM*PALYSRLPSEARSC
Trigger: ACAGCTACGTGCCTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CAA 90 bp AACTCCCTGGTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTGGTaGCAGATGTTGCCTGCATTGTACAGCAGGCTCCCGTCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: NSLVTALRKPRVKKW*QMLPALYSRLPSEA
Trigger: TGCCTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCACCAGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360271.3
ENST00000409858.8
CDS GCA 72 bp AGAGCCTTACAGCAGCTGCCTGCTGAGCACGGCTTGTaGCTGATCTCCAGCACCTCTGCCTTTGCAAGCTCA +
Preference number: 6 (lower is better)
Translates to: RALQQLPAEHGL*LISSTSAFASS
Trigger: TGAGCTTGCAAAGGCAGAGGTGCTGGAGATCAGGCACAAGCCGTGCTCAGCAGGCAGCTGCTGTAAGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CCA 72 bp TGGAACTCCCGGCCTTGCAGGTACACTTCTAAACCCTaGAGACGAGCAGGGGACAATGGCCAAGTACCCACC +
Preference number: 6 (lower is better)
Translates to: WNSRPCRYTSKP*RRAGDNGQVPT
Trigger: GGTGGGTACTTGGCCATTGTCCCCTGCTCGTCTCCAGGGTTTAGAAGTGTACCTGCAAGGCCGGGAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CAA 72 bp CCTCGGGTGAAGAAGTGGTTGCAGATGTTGCCTGCATaGTACAGCAGGCTCCCGTCGGAGGCACGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: PRVKKWLQMLPA*YSRLPSEARSC
Trigger: ACAGCTACGTGCCTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CAA 90 bp TTAAGGAAGCCTCGGGTGAAGAAGTGGTTGCAGATGTTGCCTGCATaGTACAGCAGGCTCCCGTCGGAGGCACGTAGCTGTGCGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LRKPRVKKWLQMLPA*YSRLPSEARSCAVS
Trigger: TGAGACCGCACAGCTACGTGCCTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CAA 72 bp GTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTGGTaGCAGATGTTGCCTGCATTGTACAGCAGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: VTALRKPRVKKW*QMLPALYSRLP
Trigger: CGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CCA 72 bp CTGGTGACCGCCTTAAGGAAGCCTCGGGTGAAGAAGTaGTTGCAGATGTTGCCTGCATTGTACAGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: LVTALRKPRVKK*LQMLPALYSRL
Trigger: GAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAAGGCGGTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CAA 72 bp TTAAGGAAGCCTCGGGTGAAGAAGTGGTTGCAGATGTaGCCTGCATTGTACAGCAGGCTCCCGTCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: LRKPRVKKWLQM*PALYSRLPSEA
Trigger: TGCCTCCGACGGGAGCCTGCTGTACAATGCAGGCAACATCTGCAACCACTTCTTCACCCGAGGCTTCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360271.3
ENST00000409858.8
ENST00000474787.1
CDS CCA 72 bp GGAAAGTCTTCTGCAAATTTAAACCACCGACCCCATTaGTTAACCGAGGTAGAGCTGTGCCGTCTCCACCCG +
Preference number: 6 (lower is better)
Translates to: GKSSANLNHRPH*LTEVELCRLHP
Trigger: CGGGTGGAGACGGCACAGCTCTACCTCGGTTAACCAATGGGGTCGGTGGTTTAAATTTGCAGAAGACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CAA 90 bp CCCATATCTTGGAAAGTCTTCTGCAAATTTAAACCACCGACCCCATaGGTTAACCGAGGTAGAGCTGTGCCGTCTCCACCCGAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PISWKVFCKFKPPTP*VNRGRAVPSPPEQP
Trigger: TGGCTGCTCGGGTGGAGACGGCACAGCTCTACCTCGGTTAACCAATGGGGTCGGTGGTTTAAATTTGCAGAAGACTTTCCAAGATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1
CDS CAA 72 bp TGGAAAGTCTTCTGCAAATTTAAACCACCGACCCCATaGGTTAACCGAGGTAGAGCTGTGCCGTCTCCACCC +
Preference number: 6 (lower is better)
Translates to: WKVFCKFKPPTP*VNRGRAVPSPP
Trigger: GGGTGGAGACGGCACAGCTCTACCTCGGTTAACCAATGGGGTCGGTGGTTTAAATTTGCAGAAGACTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474787.1