Pregenerated sensors for UAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000117143Ensembl transcript IDs: ENST00000271469.7, ENST00000367926.8, ENST00000474728.1, ENST00000476240.1, ENST00000486089.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCGGCCACCCCGCCCCTCTCGCCACGACTAGTGGCTGCCGACGCCTaGAGGAGTGGAAGCCGACCGCCCAGACACGTCAGCGCCGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PATPPLSPRLVAADA*RSGSRPPRHVSAGS Trigger: GCTCCCGGCGCTGACGTGTCTGGGCGGTCGGCTTCCACTCCTTCAGGCGTCGGCAGCCACTAGTCGTGGCGAGAGGGGCGGGGTGGCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271469.7 ENST00000367926.8 |
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| CDS CCA 90 bp | CCCGCCCCTCTCGCCACGACTAGTGGCTGCCGACGCCTGAAGGAGTaGAAGCCGACCGCCCAGACACGTCAGCGCCGGGAGCACAGACGA | + |
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Preference number: 5 (lower is better) Translates to: PAPLATTSGCRRLKE*KPTAQTRQRREHRR Trigger: TCGTCTGTGCTCCCGGCGCTGACGTGTCTGGGCGGTCGGCTTCCACTCCTTCAGGCGTCGGCAGCCACTAGTCGTGGCGAGAGGGGCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271469.7 |
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| CDS GCA 90 bp | CAGCGACAGGCCAAAGTTCAAGCAGCCATATGTTCAGCATACGTGTaGTCAGCCCTCCAATACCATCCTTCTTTCTCGGCGCGACCGCAG | + |
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Preference number: 5 (lower is better) Translates to: QRQAKVQAAICSAYV*SALQYHPSFSARPQ Trigger: CTGCGGTCGCGCCGAGAAAGAAGGATGGTATTGGAGGGCTGAGCACACGTATGCTGAACATATGGCTGCTTGAACTTTGGCCTGTCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476240.1 |
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| CDS GCA 72 bp | CCCGGCCACCCCGCCCCTCTCGCCACGACTAGTGGCTaGCGACGCCTGAAGGAGTGGAAGCCGACCGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGHPAPLATTSG*RRLKEWKPTAQ Trigger: CTGGGCGGTCGGCTTCCACTCCTTCAGGCGTCGGCAGCCACTAGTCGTGGCGAGAGGGGCGGGGTGGCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271469.7 ENST00000367926.8 |
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| CDS TCA 72 bp | CCGCCCCTCTCGCCACGACTAGTGGCTGCCGACGCCTaGAGGAGTGGAAGCCGACCGCCCAGACACGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPLSPRLVAADA*RSGSRPPRHVS Trigger: GCTGACGTGTCTGGGCGGTCGGCTTCCACTCCTTCAGGCGTCGGCAGCCACTAGTCGTGGCGAGAGGGGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271469.7 ENST00000367926.8 |
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| CDS CCA 72 bp | CTCGCCACGACTAGTGGCTGCCGACGCCTGAAGGAGTaGAAGCCGACCGCCCAGACACGTCAGCGCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LATTSGCRRLKE*KPTAQTRQRRE Trigger: CTCCCGGCGCTGACGTGTCTGGGCGGTCGGCTTCCACTCCTTCAGGCGTCGGCAGCCACTAGTCGTGGCGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000271469.7 ENST00000367926.8 |
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| CDS GCA 72 bp | GCCAAAGTTCAAGCAGCCATATGTTCAGCATACGTGTaGTCAGCCCTCCAATACCATCCTTCTTTCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: AKVQAAICSAYV*SALQYHPSFSA Trigger: CGCCGAGAAAGAAGGATGGTATTGGAGGGCTGAGCACACGTATGCTGAACATATGGCTGCTTGAACTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476240.1 |
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| CDS CCA 72 bp | ATCCTCAGGAAAGATGAATTCTGTGGGATATGGACTTaGGGTGTCTGCATCCCTCTCAAGTGTCTTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ILRKDEFCGIWT*GVCIPLKCLSF Trigger: GAAACTAAGACACTTGAGAGGGATGCAGACACCCCAAGTCCATATCCCACAGAATTCATCTTTCCTGAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474728.1 |
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| CDS GCA 72 bp | CCAAGCCCAATGCTAGGTGCTCTGAAGCCTTCATATTaGATTTTAATCTTCACCACTACCTTGGTACTATTA | + |
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Preference number: 6 (lower is better) Translates to: PSPMLGALKPSY*ILIFTTTLVLL Trigger: TAATAGTACCAAGGTAGTGGTGAAGATTAAAATGCAATATGAAGGCTTCAGAGCACCTAGCATTGGGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486089.1 |
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| CDS GCA 72 bp | ACTAGGTATATACTATATGCCAAGCCCAATGCTAGGTaGTCTGAAGCCTTCATATTGCATTTTAATCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: TRYILYAKPNAR*SEAFILHFNLH Trigger: GTGAAGATTAAAATGCAATATGAAGGCTTCAGAGCACCTAGCATTGGGCTTGGCATATAGTATATACCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486089.1 |
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| CDS GCA 72 bp | CAAGTATGTGTTAAAGACTTTGCTTCCCATGTTACTTaGCAGAGCAAAAGTACAAACCATAACTTTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QVCVKDFASHVT*QSKSTNHNFPL Trigger: CAGAGGAAAGTTATGGTTTGTACTTTTGCTCTGGCAAGTAACATGGGAAGCAAAGTCTTTAACACATACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486089.1 |
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