RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for UACA (Homo sapiens)

Ensembl gene IDs: ENSG00000137831

Ensembl transcript IDs: ENST00000322954.11, ENST00000379983.6, ENST00000539319.5, ENST00000558758.5, ENST00000559156.5, ENST00000559183.1, ENST00000559206.1, ENST00000559290.1, ENST00000560167.1, ENST00000560441.5, ENST00000560523.5, ENST00000560831.1, ENST00000560951.1

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAGTTACAACACATTCCTCACAACTGTATTATGTCTCAAGGTTCTaGGGATCTGAAAGGTCTTTTGATCCACCTAAAAGTGGCCACCAA +
Preference number: 1 (lower is better)
Translates to: QVTTHSSQLYYVSRF*GSERSFDPPKSGHQ
Trigger: TTGGTGGCCACTTTTAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTTGTGAGGAATGTGTTGTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR-3UTR GCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATGAAAGACCATGGAGTTaGACAAAGAATGTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHERPWS*TKNVQH
Trigger: GTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR-3UTR GCA 90 bp CACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTTGGCCATATGTTCAATGGAGTCTTGCTATTaGCCAAGCTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: HSLHLRQRHSSFLLAICSMESCY*PSWSAV
Trigger: CACTGCACTCCAGCTTGGGCAATAGCAAGACTCCAT...TGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR-3UTR CCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATTTCTCCCTTGTACTTTaGAGTCCATCGTTTCCTACT +
Preference number: 2 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHFSLVL*SPSFPT
Trigger: AGTAGGAAACGATGGACTCCAAAGTACAAGGGAGAA...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR CAA 90 bp AGAGAGCACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTaGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGG +
Preference number: 2 (lower is better)
Translates to: REHSLHLRQRHSSFL*AICSGLIVFLNTEW
Trigger: CCATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTGCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR-3UTR CCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGGGCCCAGAAAGACCATaGAGTTGCACAAAGAATGTT +
Preference number: 2 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMGPERP*SCTKNV
Trigger: AACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCC...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR CAA 90 bp CACAACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTaGATCCACCTAAAAGTGGCCACCAACCAAATTAATTTCTCTGAA +
Preference number: 2 (lower is better)
Translates to: HNCIMSQGSEDLKGL*IHLKVATNQINFSE
Trigger: TTCAGAGAAATTAATTTGGTTGGTGGCCACTTTTAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR CCA 72 bp TCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTaGCCAGCATTGTCCATTATCTATGTTCCGCTTGTT +
Preference number: 3 (lower is better)
Translates to: SGLIVFLNTEWQ*PALSIIYVPLV
Trigger: AACAAGCGGAACATAGATAATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR-3UTR CAA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAAAATGGGTATTCTCCCTaGTACTTTGGAGTCCATCGT +
Preference number: 3 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQNGYSP*YFGVHR
Trigger: ACGATGGACTCCAAAGTACAAGGGAGAATACCCATT...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322954.11
3UTR TCA 72 bp GTTGTAAACGCAATTTCTGCCTTCGATATCAAAAGGTaGGTGAATGAGACAAGATTAGTTGAAGGAAGTACT +
Preference number: 3 (lower is better)
Translates to: VVNAISAFDIKR*VNETRLVEGST
Trigger: AGTACTTCCTTCAACTAATCTTGTCTCATTCACTCACCTTTTGATATCGAAGGCAGAAATTGCGTTTACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGTAGACGGCAGCGGCTaGAGCAGAGGCGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPAVDGSG*SRGGAG
Trigger: GCCCGCGCCGCCTCTGCTGCAGCCGCTGCCGTCTAC...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCCCTGCCGCATTTGTATaGTCTGGAGCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTPAAFV*SGAEPP
Trigger: AGGAGGCTCTGCTCCAGATCATACAAATGCGGCAGG...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTAGGGCCGGGCACGTCCTaGCTCCTCAGGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLGPGTS*LLRRDL
Trigger: CAAGTCCCGCCTGAGGAGGCAGGACGTGCCCGGCCC...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTCCAATCTGCTGCATaGGCGCTGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDFQSAA*ALAAAA
Trigger: CGCCGCCGCCGCCAGCGCGCATGCAGCAGATTGGAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS-3UTR CCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTGGCTCTGCCTCTTaGTGGGGTTCCCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPAGSAS*WGSHLC
Trigger: ACACAAGTGGGAACCCCACCAAGAGGCAGAGCCAGC...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGAGTGTCAATCAGCTaGCTCTGCCTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTRVSIS*LCLLVG
Trigger: CCCCACCAAGAGGCAGAGCCAGCTGATTGACACTCT...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCCCCCACTGGAAAACTTaGACAGCACTCTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSPHWKT*TALCIL
Trigger: CAGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGG...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCCCCTGCAGGTCTGCATaGTCAGTGGGACAATTGTAC +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTPCRSA*SVGQLY
Trigger: GTACAATTGTCCCACTGAGCATGCAGACCTGCAGGG...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGTGCAGTTCTTCCCTaGAGGTCTGCATGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSSAVLP*RSACSV
Trigger: CACTGAGCATGCAGACCTGCAGGGAAGAACTGCACT...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCCTCATCTTTGCCTCGTaGTCTGCCAGGCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTLIFAS*SARLMY
Trigger: GTACATCAGCCTGGCAGAGCACGAGGCAAAGATGAG...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATCAATCAGCTGGCTCTaGCTCTTGGTGGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPSISWL*LLVGFP
Trigger: TGGGAACCCCACCAAGAGGCAGAGCCAGCTGATTGA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCACTGCTGCCTCAACACTaGAACACAGACGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPALLPQH*NTDAAV
Trigger: CACTGCAGCGTCTGTGTTGCAGTGTTGAGGCAGCAG...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCCTGCTGCCTCAACACTaGAACACAGACGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSLLPQH*NTDAAV
Trigger: CACTGCAGCGTCTGTGTTGCAGTGTTGAGGCAGCAG...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCGCCCGTCTACATCTTTaGCATTCACAGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTARLHL*HSQRPH
Trigger: ATGGGGCCTCTGTGAATGCCAAAGATGTAGACGGGC...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCAGAGTGTCAATCAGCTaGCTCTGCCTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSRVSIS*LCLLVG
Trigger: CCCCACCAAGAGGCAGAGCCAGCTGATTGACACTCT...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCCATTGCGGCATCGTaGAGTGCAGTTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSAIAAS*SAVLPC
Trigger: GCAGGGAAGAACTGCACTTCACGATGCCGCAATGGC...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATCCTCGGTTAGTCTGTaGTTCCCTGAGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPASSVSL*FPEAAS
Trigger: TGAAGCAGCCTCAGGGAATCACAGACTAACCGAGGA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAAGGGCCAACTTCGCTaGCAATTCTTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPAKGQLR*QFFCLA
Trigger: GGCCAGGCAAAAGAATTGTCAGCGAAGTTGGCCCTT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTCTGGTTTGACGTGCTaGGCAAGCTTGGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSSGLTC*ASLALT
Trigger: TGTTAAGGCCAAGCTTGCTCAGCACGTCAAACCAGA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCTGGTTTGACGTGCTaGGCAAGCTTGGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSGLTC*ASLALT
Trigger: TGTTAAGGCCAAGCTTGCTCAGCACGTCAAACCAGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCCATGTTCCTCTGGTTTaGCGTGCTGAGCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSHVPLV*RAEQAW
Trigger: CCAAGCTTGCTCAGCACGTCAAACCAGAGGAACATG...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCATGTTCCTCTGGTTTaGCGTGCTGAGCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKHVPLV*RAEQAW
Trigger: CCAAGCTTGCTCAGCACGTCAAACCAGAGGAACATG...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATACCTGCCGCATTTGTATaGTCTGGAGCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIPAAFV*SGAEPP
Trigger: AGGAGGCTCTGCTCCAGATCATACAAATGCGGCAGG...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCGCTAGAAGGACAATCTaGCATTGCGGCATCGTGAAG +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSARRTI*HCGIVK
Trigger: CTTCACGATGCCGCAATGGCAGATTGTCCTTCTAGC...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCCCTGCACCTTTCTCATaGTCTGACTTAGCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTPAPFS*SDLASS
Trigger: TGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGG...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCCCTGCACCTTTCTCATaGTCTGACTTAGCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSPAPFS*SDLASS
Trigger: TGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGG...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGGCATCGGCCAGCTGTTaGTCCAGAGATTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKASASC*SRDFTW
Trigger: CCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGC...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCACAGCACTCTGCATCCTaGTGCCTCAACACTGCAACA +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPAQHSAS*CLNTAT
Trigger: TGTTGCAGTGTTGAGGCAGCAGGATGCAGAGTGCTG...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTAGCCAGAACAAGTaGTGTCCGCCCGTCTACATC +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPASSQNK*CPPVYI
Trigger: GATGTAGACGGGCGGACACCACTTGTTCTGGCTACT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCCATTGCGGCATCGTaGAGTGCAGTTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTAIAAS*SAVLPC
Trigger: GCAGGGAAGAACTGCACTTCACGATGCCGCAATGGC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGTTGGCCTACTCATCTaGGTAGCCAGAACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPVGLLI*VARTSG
Trigger: ACCACTTGTTCTGGCTACTCAGATGAGTAGGCCAAC...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTGGGGAAGTACACTGTaGGTCTGCCATATACATCTG +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTWGSTL*VCHIHL
Trigger: CAGATGTATATGGCAGACTCACAGTGTACTTCCCCA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATCTGGTTTGACGTGCTaGGCAAGCTTGGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPASGLTC*ASLALT
Trigger: TGTTAAGGCCAAGCTTGCTCAGCACGTCAAACCAGA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCCAAACTCCTGACAAGTaGCTCAGTCCCTCACATGCT +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSQTPDK*LSPSHA
Trigger: AGCATGTGAGGGACTGAGTCACTTGTCAGGAGTTTG...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATCTCAGACAAACTCCTaGCAAGTGACTCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPASQTNS*QVTQSL
Trigger: GAGGGACTGAGTCACTTGTCAGGAGTTTGTCTGAGA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCGAACCTTAAAGGCTaGGGAGTGCCAGCGCGCAAG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDANLKG*GVPARK
Trigger: CTTGCGCGCTGGCACTCCGCAGCCTTTAAGGTTCGC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTCATGGCTAACTCTTaGCTGGCCCCCGCGCGAACC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDFMANS*LAPART
Trigger: GGTTCGCGCGGGGGCCAGGCAAGAGTTAGCCATGAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAATTCCAATCTGCTGCATaGGCGCTGGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQFQSAA*ALAAAA
Trigger: CGCCGCCGCCGCCAGCGCGCATGCAGCAGATTGGAA...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAGCCCGTCTACATCTTTaGCATTCACAGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIARLHL*HSQRPH
Trigger: ATGGGGCCTCTGTGAATGCCAAAGATGTAGACGGGC...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCGCTTTGCATATGGGCTaGTATACCTGGGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTALHMG*YTWGST
Trigger: TGTACTTCCCCAGGTATACCAGCCCATATGCAAAGC...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCGAGCTCCTTCTTCTaGGCTTTAATTTCGGCATGC +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSSSFF*ALISAC
Trigger: GCATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGGCTCTGCCTCTTGGTaGGGTTCCCACTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECGSASW*GSHLCR
Trigger: CCTACACAAGTGGGAACCCCACCAAGAGGCAGAGCC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGGGCTCTGCCTCTTGGTaGGGTTCCCACTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQGSASW*GSHLCR
Trigger: CCTACACAAGTGGGAACCCCACCAAGAGGCAGAGCC...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGGCTGGCTCTGCCTCTTaGTGGGGTTCCCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQAGSAS*WGSHLC
Trigger: ACACAAGTGGGAACCCCACCAAGAGGCAGAGCCAGC...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCAGTGGCGAGATCTTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDAVARS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAAGATCTCGCCACTGC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTCCTCAGGCGGGACTTaGGGCTCTTCATGGCTAACT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSSGGT*GSSWLT
Trigger: AGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATCCTCAGGCGGGACTTaGGGCTCTTCATGGCTAACT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSSGGT*GSSWLT
Trigger: AGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATTCGCAACCTAGCATaGGGGCAGTTCTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTIRNLA*GQFCFV
Trigger: AACAAAACAGAACTGCCCTCATGCTAGGTTGCGAAT...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTGGGGAAGTACACTGTaGGTCTGCCATATACATCTG +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSWGSTL*VCHIHL
Trigger: CAGATGTATATGGCAGACTCACAGTGTACTTCCCCA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTCGGTCTTGTTTTGCTaGCTCACAGAAAGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSSVLFC*LTESSH
Trigger: ATGCGAACTTTCTGTGAGTCAGCAAAACAAGACCGA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCACATGTTCCTCTGGTTTaGCGTGCTGAGCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSHVPLV*RAEQAW
Trigger: CCAAGCTTGCTCAGCACGTCAAACCAGAGGAACATG...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCACGTGCTCTGCCAGGCTaGTGTACTCAGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPRALPG*CTQLLF
Trigger: AAATAAAAGCTGAGTACATCAGCCTGGCAGAGCACG...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGACATCTTCATCCATGTaGCCCTGTGCAGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKTSSSM*PCAALR
Trigger: TCTTAGTGCTGCACAGGGTCACATGGATGAAGATGT...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCCTGCCGCATTTGTATaGTCTGGAGCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQPAAFV*SGAEPP
Trigger: AGGAGGCTCTGCTCCAGATCATACAAATGCGGCAGG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCACTGGTCTCGAACTTCTaGCCTCAGGTGATCTACCTC +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSLVSNF*PQVIYL
Trigger: GAGGTAGATCACCTGAGGTCAGAAGTTCGAGACCAG...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGCGGCATCGTGAAGTaGAGTTCTTCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQCGIVK*SSSLQV
Trigger: GACCTGCAGGGAAGAACTGCACTTCACGATGCCGCA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAATCAGCTGGCTCTaGCTCTTGGTGGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECSISWL*LLVGFP
Trigger: TGGGAACCCCACCAAGAGGCAGAGCCAGCTGATTGA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATCCATGTGACCCTGTaGAGCACTAAGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKIHVTL*STKKVC
Trigger: ACACACCTTCTTAGTGCTGCACAGGGTCACATGGAT...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGGCACCTGCCACCATaGAGGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTRHLPP*RANFCI
Trigger: AATACAAAAATTAGCCCTGCATGGTGGCAGGTGCCT...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACTCAGTCCCTCACATaGTGTGCTACACTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSTQSLT*CATLSL
Trigger: CAAGCTAAGTGTAGCACAGCATGTGAGGGACTGAGT...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCGGTCTGCATGCTCAGTaGGACAATTGTACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTGLHAQ*DNCTVE
Trigger: TTCTACAGTACAATTGTCCCACTGAGCATGCAGACC...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAAGTAGCCAGAACAAGTaGTGTCCGCCCGTCTACATC +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSSSQNK*CPPVYI
Trigger: GATGTAGACGGGCGGACACCACTTGTTCTGGCTACT...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTTTGCATATGGGCTaGTATACCTGGGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPALHMG*YTWGST
Trigger: TGTACTTCCCCAGGTATACCAGCCCATATGCAAAGC...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCACTGTTCATGTTCCTCTaGTTTGACGTGCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPALFMFL*FDVLSK
Trigger: CTTGCTCAGCACGTCAAACCAGAGGAACATGAACAG...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGGCTCTGCCTCTTGGTaGGGTTCCCACTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDGSASW*GSHLCR
Trigger: CCTACACAAGTGGGAACCCCACCAAGAGGCAGAGCC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTTGGCCATATGTTCAGCTGGCTCTGCCTCTTaGTGGGGTTCCCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: HSLHLRQRHSSFLLAICSAGSAS*WGSHLC
Trigger: ACACAAGTGGGAACCCCACCAAGAGGCAGAGCCAGC...TGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAGAGTGTCAATCAGCTaGCTCTGCCTCTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQRVSIS*LCLLVG
Trigger: CCCCACCAAGAGGCAGAGCCAGCTGATTGACACTCT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAACACAGAATGGCAGTaGCCAGCATTGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSNTEWQ*PALSII
Trigger: GATAATGGACAATGCTGGCCACTGCCATTCTGTGTT...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATACTCAAGATTCCCCTTTaGGGTCACAACATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKILKIPL*GHNMED
Trigger: GTCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAG...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGCCATTGCGGCATCGTaGAGTGCAGTTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKAIAAS*SAVLPC
Trigger: GCAGGGAAGAACTGCACTTCACGATGCCGCAATGGC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATGCTCCCTCTGATGTaGCTTCACATTTACTTCATC +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTMLPLM*LHIYFI
Trigger: GATGAAGTAAATGTGAAGTCACATCAGAGGGAGCAT...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCAGAGTATGACGTTTaGCTGGGTAAAGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSEYDV*LGKDSS
Trigger: GGAACTATCTTTACCCAGTCAAACGTCATACTCTGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTCCTCGGTTAGTCTGTaGTTCCCTGAGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSSVSL*FPEAAS
Trigger: TGAAGCAGCCTCAGGGAATCACAGACTAACCGAGGA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAAGGGCCAACTTCGCTaGCAATTCTTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQKGQLR*QFFCLA
Trigger: GGCCAGGCAAAAGAATTGTCAGCGAAGTTGGCCCTT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCATGTTCCTCTGGTTTaGCGTGCTGAGCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQHVPLV*RAEQAW
Trigger: CCAAGCTTGCTCAGCACGTCAAACCAGAGGAACATG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGTGGCCCAAAACTTGTaGAACAGAACTCATGCTGAA +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPAVAQNL*NRTHAE
Trigger: TTCAGCATGAGTTCTGTTTCACAAGTTTTGGGCCAC...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTTGCAATGCAGAACTTaGTTAAGAGCAGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSLQCRT*LRAAPS
Trigger: ACTTGGGGCTGCTCTTAATCAAGTTCTGCATTGCAA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCACAAACTCCTGACAAGTaGCTCAGTCCCTCACATGCT +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSQTPDK*LSPSHA
Trigger: AGCATGTGAGGGACTGAGTCACTTGTCAGGAGTTTG...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGTTAAAGGCTGCGGAGTaGCAGCGCGCAAGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMLKAAE*QRARSR
Trigger: TCTACTCCTTGCGCGCTGGCACTCCGCAGCCTTTAA...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCATGGAAGACAGATCTaGCTTCCACATCTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKHGRQI*LPHLVC
Trigger: GCAAACTAGATGTGGAAGGCAGATCTGTCTTCCATG...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAAGTGCAGTTCTTCCCTaGAGGTCTGCATGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSAVLP*RSACSV
Trigger: CACTGAGCATGCAGACCTGCAGGGAAGAACTGCACT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGCGGCATCGTGAAGTaGAGTTCTTCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKECGIVK*SSSLQV
Trigger: GACCTGCAGGGAAGAACTGCACTTCACGATGCCGCA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTGCGGCATCGTGAAGTaGAGTTCTTCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDCGIVK*SSSLQV
Trigger: GACCTGCAGGGAAGAACTGCACTTCACGATGCCGCA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTCATCTTTGCCTCGTaGTCTGCCAGGCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLIFAS*SARLMY
Trigger: GTACATCAGCCTGGCAGAGCACGAGGCAAAGATGAG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAAGAGATTTCACTTGGTaGTGCAGAGTGTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPRDFTW*CRVSIS
Trigger: GCTGATTGACACTCTGCAGCACCAAGTGAAATCTCT...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAATGGAGTCTTGCTATTaGCCAAGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSMESCY*PSWSAV
Trigger: CACTGCACTCCAGCTTGGGCAATAGCAAGACTCCAT...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACAGCACTCTGCATCCTaGTGCCTCAACACTGCAACA +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTQHSAS*CLNTAT
Trigger: TGTTGCAGTGTTGAGGCAGCAGGATGCAGAGTGCTG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATCGCTGTTGCAAAGATaGCCCTTTCTTCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPSLLQR*PFLPKF
Trigger: GAACTTTGGAAGAAAGGGCCATCTTTGCAACAGCGA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAATTTTTCAGCTGGAATaGAAAGGGCCAACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPIFQLE*KGPTSL
Trigger: CAGCGAAGTTGGCCCTTTCCATTCCAGCTGAAAAAT...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGGCTCTGCCTCTTGGTaGGGTTCCCACTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIGSASW*GSHLCR
Trigger: CCTACACAAGTGGGAACCCCACCAAGAGGCAGAGCC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGCTGGCTCTGCCTCTTaGTGGGGTTCCCACTTGTGT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKAGSAS*WGSHLC
Trigger: ACACAAGTGGGAACCCCACCAAGAGGCAGAGCCAGC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGGGCCCAGAAAGACCATaGAGTTGCACAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKGPERP*SCTKNV
Trigger: AACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCC...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTACTTAGCAGCCAGGTaGAGAGCATTTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQYLAAR*RAFLPA
Trigger: TGCAGGGAGAAATGCTCTTCACCTGGCTGCTAAGTA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTACTTAGCAGCCAGGTaGAGAGCATTTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECYLAAR*RAFLPA
Trigger: TGCAGGGAGAAATGCTCTTCACCTGGCTGCTAAGTA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGTTGGCCTACTCATCTaGGTAGCCAGAACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECVGLLI*VARTSG
Trigger: ACCACTTGTTCTGGCTACTCAGATGAGTAGGCCAAC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAATTCGCAACCTAGCATaGGGGCAGTTCTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIIRNLA*GQFCFV
Trigger: AACAAAACAGAACTGCCCTCATGCTAGGTTGCGAAT...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCTTTATCTGTTCATCTaGATCCTCCTTGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKLYLFI*ILLDPF
Trigger: GAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAG...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCCTTTATCTGTTCATCTaGATCCTCCTTGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSLYLFI*ILLDPF
Trigger: GAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAG...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTTTCCCCACTTCTGCTaGAGCACCTTCATATTTTAC +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKFPHFC*STFIFY
Trigger: GTAAAATATGAAGGTGCTTCAGCAGAAGTGGGGAAA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATTTCCCCACTTCTGCTaGAGCACCTTCATATTTTAC +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPAFPHFC*STFIFY
Trigger: GTAAAATATGAAGGTGCTTCAGCAGAAGTGGGGAAA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAACCTTTCTCATGCTCTaGCTTAGCGAGCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKITFLML*LSELIF
Trigger: AAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGT...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCGCTCTTTCCATTTCATaGGACTTCTCAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTALSIS*DFSMRT
Trigger: AGTTCTCATTGAGAAGTCTCATGAAATGGAAAGAGC...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACCTGCCGCATTTGTATaGTCTGGAGCAGAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIPAAFV*SGAEPP
Trigger: AGGAGGCTCTGCTCCAGATCATACAAATGCGGCAGG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATCTCAGACAAACTCCTaGCAAGTGACTCAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSQTNS*QVTQSL
Trigger: GAGGGACTGAGTCACTTGTCAGGAGTTTGTCTGAGA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGCCCTGCAGGTCTGCATaGTCAGTGGGACAATTGTAC +
Preference number: 4 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMPCRSA*SVGQLY
Trigger: GTACAATTGTCCCACTGAGCATGCAGACCTGCAGGG...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATCCCTGCAGGTCTGCATaGTCAGTGGGACAATTGTAC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDPCRSA*SVGQLY
Trigger: GTACAATTGTCCCACTGAGCATGCAGACCTGCAGGG...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAACCCTGCAGGTCTGCATaGTCAGTGGGACAATTGTAC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEPCRSA*SVGQLY
Trigger: GTACAATTGTCCCACTGAGCATGCAGACCTGCAGGG...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGTGCAGTTCTTCCCTaGAGGTCTGCATGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSAVLP*RSACSV
Trigger: CACTGAGCATGCAGACCTGCAGGGAAGAACTGCACT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATGCGGCATCGTGAAGTaGAGTTCTTCCCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQICGIVK*SSSLQV
Trigger: GACCTGCAGGGAAGAACTGCACTTCACGATGCCGCA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTAGAAGGACAATCTaGCATTGCGGCATCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTARRTI*HCGIVK
Trigger: CTTCACGATGCCGCAATGGCAGATTGTCCTTCTAGC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGTCAAATTTCGCTGTTaGAAAGATGGCCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPVKFRC*KDGPFF
Trigger: GAAGAAAGGGCCATCTTTGCAACAGCGAAATTTGAC...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTTGCTTTTCTTTAGCTaGCAAAAGGGACTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTLLFFS*QKGLQL
Trigger: AAGCTGAAGTCCCTTTTGGCAGCTAAAGAAAAGCAA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAACATAGATCTGCTTTaGATATGGGCTGGTATACCT +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTNIDLL*IWAGIP
Trigger: AGGTATACCAGCCCATATGCAAAGCAGATCTATGTT...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATCTCATCTTTGCCTCGTaGTCTGCCAGGCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDLIFAS*SARLMY
Trigger: GTACATCAGCCTGGCAGAGCACGAGGCAAAGATGAG...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACCTGCACCTTTCTCATaGTCTGACTTAGCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTPAPFS*SDLASS
Trigger: TGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATCTTTAATCTGCAAATaGTCTGCCAGGGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPASLICK*SARGTE
Trigger: TTCTGTACCCCTGGCAGAGCATTTGCAGATTAAAGA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCAATGCTTCTTTAATCTaGAAATGCTCTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSNASLI*KCSARG
Trigger: ACCCCTGGCAGAGCATTTGCAGATTAAAGAAGCATT...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCAATCAGCTGGCTCTaGCTCTTGGTGGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISISWL*LLVGFP
Trigger: TGGGAACCCCACCAAGAGGCAGAGCCAGCTGATTGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATCAATCAGCTGGCTCTaGCTCTTGGTGGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKSISWL*LLVGFP
Trigger: TGGGAACCCCACCAAGAGGCAGAGCCAGCTGATTGA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCATCGGCCAGCTGTTaGTCCAGAGATTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDASASC*SRDFTW
Trigger: CCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGCAATTACTTCTTGGTaGTGTCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECAITSW*CLSASA
Trigger: GGCCGATGCTGACAGACAGCACCAAGAAGTAATTGC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGTATGACGTTTGACTaGGTAAAGATAGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSSMTFD*VKIVPE
Trigger: CTCTGGAACTATCTTTACCCAGTCAAACGTCATACT...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATCCAGAGATTTCACTTaGTGCTGCAGAGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKISRDFT*CCRVSI
Trigger: GATTGACACTCTGCAGCACCAAGTGAAATCTCTGGA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATTGCAATTACTTCTTaGTGCTGTCTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKIAITS*CCLSAS
Trigger: CGATGCTGACAGACAGCACCAAGAAGTAATTGCAAT...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATGGCCCAGAAAGACCATaGAGTTGCACAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHGPERP*SCTKNV
Trigger: AACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCC...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCCTTTTTAGCAAGGATTaGGGTCACTTTTTCTACATC +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSLFSKD*GHFFYI
Trigger: GATGTAGAAAAAGTGACCTCAATCCTTGCTAAAAAG...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTCTCAAGATTCCCCTTTaGGGTCACAACATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECLKIPL*GHNMED
Trigger: GTCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAG...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACTCAAGATTCCCCTTTaGGGTCACAACATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLKIPL*GHNMED
Trigger: GTCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATACTTAGCAGCCAGGTaGAGAGCATTTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEYLAAR*RAFLPA
Trigger: TGCAGGGAGAAATGCTCTTCACCTGGCTGCTAAGTA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCACTTCTTTTCGGTTACTaGAATGACTTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPALLFGY*NDFLIL
Trigger: TAGGATCAGGAAGTCATTTCAGTAACCGAAAAGAAG...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000379983.6
CDS-3UTR TCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTCTGCCATATACATCTaGCCTTGTTTAAGAAGCATA +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSSAIYI*PCLRSI
Trigger: TATGCTTCTTAAACAAGGTCAGATGTATATGGCAGA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGGGGAAGTACACTGTaGGTCTGCCATATACATCTG +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQWGSTL*VCHIHL
Trigger: CAGATGTATATGGCAGACTCACAGTGTACTTCCCCA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATTCAGAGTATGACGTTTaGCTGGGTAAAGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHSEYDV*LGKDSS
Trigger: GGAACTATCTTTACCCAGTCAAACGTCATACTCTGA...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCATCGGTCTTGTTTTGCTaGCTCACAGAAAGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSSVLFC*LTESSH
Trigger: ATGCGAACTTTCTGTGAGTCAGCAAAACAAGACCGA...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATCCTCGGTTAGTCTGTaGTTCCCTGAGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKSSVSL*FPEAAS
Trigger: TGAAGCAGCCTCAGGGAATCACAGACTAACCGAGGA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCTGGTTTGACGTGCTaGGCAAGCTTGGCCTTAACA +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSGLTC*ASLALT
Trigger: TGTTAAGGCCAAGCTTGCTCAGCACGTCAAACCAGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATATGTGCTTGCTCCTTaGGGAGCTTATTATCCAAAT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPYVLAP*GAYYPN
Trigger: ATTTGGATAATAAGCTCCTCAAGGAGCAAGCACATA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTATGTGCTTGCTCCTTaGGGAGCTTATTATCCAAAT +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSYVLAP*GAYYPN
Trigger: ATTTGGATAATAAGCTCCTCAAGGAGCAAGCACATA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCGTGCTCTGCCAGGCTaGTGTACTCAGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQRALPG*CTQLLF
Trigger: AAATAAAAGCTGAGTACATCAGCCTGGCAGAGCACG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTCGTGCTCTGCCAGGCTaGTGTACTCAGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECRALPG*CTQLLF
Trigger: AAATAAAAGCTGAGTACATCAGCCTGGCAGAGCACG...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCGCACTCCTCAAAGCTaGCAATTGGGGCGTATTTTA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQRTPQS*QLGRIL
Trigger: TAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACGCACTCCTCAAAGCTaGCAATTGGGGCGTATTTTA +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTRTPQS*QLGRIL
Trigger: TAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCAAGCTGGCTTTTATaGTTCCAACTTCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSSWLL*FQLLSQ
Trigger: TTGAGAAAGAAGTTGGAATCATAAAAGCCAGCTTGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGACATCTTCATCCATGTaGCCCTGTGCAGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQTSSSM*PCAALR
Trigger: TCTTAGTGCTGCACAGGGTCACATGGATGAAGATGT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATATGTCTCAAGGTTCTaGGGATCTGAAAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPYVSRF*GSERSF
Trigger: AAAAGACCTTTCAGATCCTCAGAACCTTGAGACATA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACCCCACTGGAAAACTTaGACAGCACTCTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIPHWKT*TALCIL
Trigger: CAGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGATATTTATTCCAATCTaGTGCATGCGCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMIFIPI*CMRAGG
Trigger: GCCGCCAGCGCGCATGCAGCAGATTGGAATAAATAT...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATATTTATTCCAATCTaGTGCATGCGCGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDIFIPI*CMRAGG
Trigger: GCCGCCAGCGCGCATGCAGCAGATTGGAATAAATAT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAAGTGCAGTTCTTCCCTaGAGGTCTGCATGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKSAVLP*RSACSV
Trigger: CACTGAGCATGCAGACCTGCAGGGAAGAACTGCACT...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCTAGAAGGACAATCTaGCATTGCGGCATCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDARRTI*HCGIVK
Trigger: CTTCACGATGCCGCAATGGCAGATTGTCCTTCTAGC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCACTAATGCTAAAGCTTTaGATTCTGCCACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPLMLKL*ILPLCV
Trigger: CACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAG...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTCATCTTTGCCTCGTaGTCTGCCAGGCTGATGTAC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILIFAS*SARLMY
Trigger: GTACATCAGCCTGGCAGAGCACGAGGCAAAGATGAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATCTTTAATCTGCAAATaGTCTGCCAGGGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKISLICK*SARGTE
Trigger: TTCTGTACCCCTGGCAGAGCATTTGCAGATTAAAGA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTGCTCAATGCTGAAATaGAGTAATTCCTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSCSMLK*SNSFSS
Trigger: AGATGAGAAGGAATTACTGCATTTCAGCATTGAGCA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGCATCGGCCAGCTGTTaGTCCAGAGATTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIASASC*SRDFTW
Trigger: CCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAGCAATTACTTCTTGGTaGTGTCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEAITSW*CLSASA
Trigger: GGCCGATGCTGACAGACAGCACCAAGAAGTAATTGC...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCAATTACTTCTTGGTaGTGTCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDAITSW*CLSASA
Trigger: GGCCGATGCTGACAGACAGCACCAAGAAGTAATTGC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAATCCATGTGACCCTGTaGAGCACTAAGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTIHVTL*STKKVC
Trigger: ACACACCTTCTTAGTGCTGCACAGGGTCACATGGAT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGGTCTGCATGCTCAGTaGGACAATTGTACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSGLHAQ*DNCTVE
Trigger: TTCTACAGTACAATTGTCCCACTGAGCATGCAGACC...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGCCCGTCTACATCTTTaGCATTCACAGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIARLHL*HSQRPH
Trigger: ATGGGGCCTCTGTGAATGCCAAAGATGTAGACGGGC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGGATCTGCTTTGCATATaGGCTGGTATACCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQDLLCI*AGIPGE
Trigger: TTCCCCAGGTATACCAGCCCATATGCAAAGCAGATC...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACTGTTCATGTTCCTCTaGTTTGACGTGCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLFMFL*FDVLSK
Trigger: CTTGCTCAGCACGTCAAACCAGAGGAACATGAACAG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTGTTCATGTTCCTCTaGTTTGACGTGCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLFMFL*FDVLSK
Trigger: CTTGCTCAGCACGTCAAACCAGAGGAACATGAACAG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCGTCTGCTCTGATAACTaGTCTTTTAGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSVCSDN*SFSSFS
Trigger: AGAGAAAGAACTAAAAGACCAGTTATCAGAGCAGAC...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATACAATTGATGCAGTTTaGTCACTGTCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHTIDAV*SLSAAL
Trigger: AAGAGCAGCAGACAGTGACCAAACTGCATCAATTGT...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTTTCTGAACACAGAATaGCAGTGGCCAGCATTGTCC +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECFLNTE*QWPALS
Trigger: GGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATACTTAGCAGCCAGGTaGAGAGCATTTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKYLAAR*RAFLPA
Trigger: TGCAGGGAGAAATGCTCTTCACCTGGCTGCTAAGTA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTAGTTGGCCTACTCATCTaGGTAGCCAGAACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLVGLLI*VARTSG
Trigger: ACCACTTGTTCTGGCTACTCAGATGAGTAGGCCAAC...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAATGCTCCCTCTGATGTaGCTTCACATTTACTTCATC +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSMLPLM*LHIYFI
Trigger: GATGAAGTAAATGTGAAGTCACATCAGAGGGAGCAT...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCGGTCTTGTTTTGCTaGCTCACAGAAAGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECSVLFC*LTESSH
Trigger: ATGCGAACTTTCTGTGAGTCAGCAAAACAAGACCGA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTTAACTGGCACATACTaGTTACTCATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSLTGTY*LLIIFF
Trigger: GAAGAAGATGATGAGTAATCAGTATGTGCCAGTTAA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGACCTTTCTCATGCTCTaGCTTAGCGAGCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQTFLML*LSELIF
Trigger: AAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAACGCACTCCTCAAAGCTaGCAATTGGGGCGTATTTTA +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKERTPQS*QLGRIL
Trigger: TAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCG...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACATCTTCATCCATGTaGCCCTGTGCAGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDTSSSM*PCAALR
Trigger: TCTTAGTGCTGCACAGGGTCACATGGATGAAGATGT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTTTACTCCAGATAGCTaGATGAAAATGGGTATTCTC +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSFTPDS*MKMGIL
Trigger: GAGAATACCCATTTTCATTCAGCTATCTGGAGTAAA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCGTTGAAGGAAGTACTTaGTATTTTACTCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSVEGST*YFTPDS
Trigger: GCTATCTGGAGTAAAATATCAAGTACTTCCTTCAAC...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGCTAGAAGGACAATCTaGCATTGCGGCATCGTGAAG +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKARRTI*HCGIVK
Trigger: CTTCACGATGCCGCAATGGCAGATTGTCCTTCTAGC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTCATACATCCTCTTCTaGACATCTTTTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSSYILF*TSFNAS
Trigger: AGATGCATTAAAAGATGTGCAGAAGAGGATGTATGA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTACCTGCACCTTTCTCATaGTCTGACTTAGCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLPAPFS*SDLASS
Trigger: TGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGG...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATGCTCAATGCTGAAATaGAGTAATTCCTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPCSMLK*SNSFSS
Trigger: AGATGAGAAGGAATTACTGCATTTCAGCATTGAGCA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGCAATTACTTCTTGGTaGTGTCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIAITSW*CLSASA
Trigger: GGCCGATGCTGACAGACAGCACCAAGAAGTAATTGC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCCATGTGACCCTGTaGAGCACTAAGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDIHVTL*STKKVC
Trigger: ACACACCTTCTTAGTGCTGCACAGGGTCACATGGAT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAACTCAGTCCCTCACATaGTGTGCTACACTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKETQSLT*CATLSL
Trigger: CAAGCTAAGTGTAGCACAGCATGTGAGGGACTGAGT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTATTCACAGAGGCCCCATaGTCACAAAGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLFTEAP*SQSSCM
Trigger: CATACAGCTGCTTTGTGACCATGGGGCCTCTGTGAA...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGTTCTCTCCCTTTGTTaGTATTTTCCGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: YTSTVRPRKTMELHKECSVLSLC*YFPMQS
Trigger: AGACTGCATCGGAAAATACCAACAAAGGGAGAGAAC...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGATCTGCTTTGCATATaGGCTGGTATACCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDDLLCI*AGIPGE
Trigger: TTCCCCAGGTATACCAGCCCATATGCAAAGCAGATC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGTGCCAGTTCATTTTaGAGCTTCAGTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQCASSF*SFSRSC
Trigger: ACAAGACCGACTGAAGCTCCAAAATGAACTGGCACA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATGTGCCAGTTCATTTTaGAGCTTCAGTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTCASSF*SFSRSC
Trigger: ACAAGACCGACTGAAGCTCCAAAATGAACTGGCACA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTATTTTTCAGCTGGAATaGAAAGGGCCAACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECIFQLE*KGPTSL
Trigger: CAGCGAAGTTGGCCCTTTCCATTCCAGCTGAAAAAT...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTTCAAATTTTTCAGCTaGAATGGAAAGGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKFKFFS*NGKGQL
Trigger: AAGTTGGCCCTTTCCATTCCAGCTGAAAAATTTGAA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCGAGCTCCTTCTTCTaGGCTTTAATTTCGGCATGC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSSSFF*ALISAC
Trigger: GCATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATCCAGAGATTTCACTTaGTGCTGCAGAGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSRDFT*CCRVSI
Trigger: GATTGACACTCTGCAGCACCAAGTGAAATCTCTGGA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGGCCCAGAAAGACCATaGAGTTGCACAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECGPERP*SCTKNV
Trigger: AACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGTGCTACACTTAGCTTaGATCTCTAACGATATTTTC +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPAVLHLA*ISNDIF
Trigger: GAAAATATCGTTAGAGATCCAAGCTAAGTGTAGCAC...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTCAAGATTCCCCTTTaGGGTCACAACATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILKIPL*GHNMED
Trigger: GTCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTATCTATCAGCAGTTaGCATATTGTTGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLSISS*HIVGLL
Trigger: GAGTAGGCCAACAATATGTCAACTGCTGATAGATAG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAATTCGCAACCTAGCATaGGGGCAGTTCTGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEIRNLA*GQFCFV
Trigger: AACAAAACAGAACTGCCCTCATGCTAGGTTGCGAAT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCTCCCTCTGATGTaGCTTCACATTTACTTCATC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQMLPLM*LHIYFI
Trigger: GATGAAGTAAATGTGAAGTCACATCAGAGGGAGCAT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATGGGGAAGTACACTGTaGGTCTGCCATATACATCTG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIWGSTL*VCHIHL
Trigger: CAGATGTATATGGCAGACTCACAGTGTACTTCCCCA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATCAGAGTATGACGTTTaGCTGGGTAAAGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSEYDV*LGKDSS
Trigger: GGAACTATCTTTACCCAGTCAAACGTCATACTCTGA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCGGTCTTGTTTTGCTaGCTCACAGAAAGTTCGCAT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSVLFC*LTESSH
Trigger: ATGCGAACTTTCTGTGAGTCAGCAAAACAAGACCGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTCATCTGAATCCTCCTTaGCCCTTTCACATTCTAATG +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECHLNPP*PFHILM
Trigger: CATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATG...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACATCTGAATCCTCCTTaGCCCTTTCACATTCTAATG +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTHLNPP*PFHILM
Trigger: CATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACTTTATCTGTTCATCTaGATCCTCCTTGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLYLFI*ILLDPF
Trigger: GAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAAAAGGGCCAACTTCGCTaGCAATTCTTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQKGQLR*QFFCLA
Trigger: GGCCAGGCAAAAGAATTGTCAGCGAAGTTGGCCCTT...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATTAACTGGCACATACTaGTTACTCATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKILTGTY*LLIIFF
Trigger: GAAGAAGATGATGAGTAATCAGTATGTGCCAGTTAA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACGTGCTCTGCCAGGCTaGTGTACTCAGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIRALPG*CTQLLF
Trigger: AAATAAAAGCTGAGTACATCAGCCTGGCAGAGCACG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACCTTTCTCATGCTCTaGCTTAGCGAGCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDTFLML*LSELIF
Trigger: AAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACGCACTCCTCAAAGCTaGCAATTGGGGCGTATTTTA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIRTPQS*QLGRIL
Trigger: TAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGGTTGGGAAAGGCCATTaGGTGCCTGTTTTAATCTTT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQVGKGH*VPVLIF
Trigger: AAAGATTAAAACAGGCACTCAATGGCCTTTCCCAAC...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAACATCTTCATCCATGTaGCCCTGTGCAGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKTSSSM*PCAALR
Trigger: TCTTAGTGCTGCACAGGGTCACATGGATGAAGATGT...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CATGTAACTTGGCCAGCCAAGTTACAACACATTCCTCACAACTGTATTATGTCTCCAATAGGAATTGAGTaGTTCTCTCAGAGAGCACTC +
Preference number: 4 (lower is better)
Translates to: HVTWPAKLQHIPHNCIMSPIGIE*FSQRAL
Trigger: GAGTGCTCTCTGAGAGAATCACTCAATTCCTATTGG...AGACATAATACAGTTGTGAGGAATGTGTTGTAACTTGGCTGGCCAAGTTACATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAACATGGAAGACAGATCTaGCTTCCACATCTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEHGRQI*LPHLVC
Trigger: GCAAACTAGATGTGGAAGGCAGATCTGTCTTCCATG...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATCATGGAAGACAGATCTaGCTTCCACATCTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDHGRQI*LPHLVC
Trigger: GCAAACTAGATGTGGAAGGCAGATCTGTCTTCCATG...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGTCAAATTTCGCTGTTaGAAAGATGGCCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECVKFRC*KDGPFF
Trigger: GAAGAAAGGGCCATCTTTGCAACAGCGAAATTTGAC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGAAAATGGGTCTaGATTTGTTTAACTTTACCT +
Preference number: 4 (lower is better)
Translates to: STVRPRKTMELHKECSAPARKWV*ICLTLP
Trigger: AGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGC...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATGTTAAGTTATGTGCTTaGTCCTTGAGGAGCTTATTA +
Preference number: 4 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHVKLCA*SLRSLL
Trigger: TAATAAGCTCCTCAAGGAGCAAGCACATAACTTAAC...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATGCTCGTCTGTTTTTCTaGTTAATGCTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHARLFF*LMLFPF
Trigger: AAATGGAAAGAGCATTAAGCAGAAAAACAGACGAGC...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAGCTCGTCTGTTTTTCTaGTTAATGCTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIARLFF*LMLFPF
Trigger: AAATGGAAAGAGCATTAAGCAGAAAAACAGACGAGC...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATCTTTAATCTGCAAATaGTCTGCCAGGGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSLICK*SARGTE
Trigger: TTCTGTACCCCTGGCAGAGCATTTGCAGATTAAAGA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTCTTTAATCTGCAAATaGTCTGCCAGGGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSLICK*SARGTE
Trigger: TTCTGTACCCCTGGCAGAGCATTTGCAGATTAAAGA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGAGATTTCACTTGGTaGTGCAGAGTGTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDRDFTW*CRVSIS
Trigger: GCTGATTGACACTCTGCAGCACCAAGTGAAATCTCT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAAGAGATTTCACTTGGTaGTGCAGAGTGTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKERDFTW*CRVSIS
Trigger: GCTGATTGACACTCTGCAGCACCAAGTGAAATCTCT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAATCCATGTGACCCTGTaGAGCACTAAGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKIHVTL*STKKVC
Trigger: ACACACCTTCTTAGTGCTGCACAGGGTCACATGGAT...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGGAAAGACCATGGAGTTaGACAAAGAATGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQERPWS*TKNVQH
Trigger: GTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAAAGACCATGGAGTTaGACAAAGAATGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTERPWS*TKNVQH
Trigger: GTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCGCTGTTGCAAAGATaGCCCTTTCTTCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSLLQR*PFLPKF
Trigger: GAACTTTGGAAGAAAGGGCCATCTTTGCAACAGCGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGCTTTGCATATGGGCTaGTATACCTGGGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIALHMG*YTWGST
Trigger: TGTACTTCCCCAGGTATACCAGCCCATATGCAAAGC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGATCTGCTTTGCATATaGGCTGGTATACCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIDLLCI*AGIPGE
Trigger: TTCCCCAGGTATACCAGCCCATATGCAAAGCAGATC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGCCAGTTCATTTTaGAGCTTCAGTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKECASSF*SFSRSC
Trigger: ACAAGACCGACTGAAGCTCCAAAATGAACTGGCACA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATTAAGGGCAAGAAAATaGGTCTGCATTTGTTTAACT +
Preference number: 4 (lower is better)
Translates to: TVRPRKTMELHKECSAPALRARK*VCICLT
Trigger: AGTTAAACAAATGCAGACCCATTTTCTTGCCCTTAA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CATGTAACTTGGCCAGCCAAGTTACAACACATTCCTCACAACTGTATTATGTCTATTTTTCAGCTGGAATaGAAAGGGCCAACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: HVTWPAKLQHIPHNCIMSIFQLE*KGPTSL
Trigger: CAGCGAAGTTGGCCCTTTCCATTCCAGCTGAAAAAT...AGACATAATACAGTTGTGAGGAATGTGTTGTAACTTGGCTGGCCAAGTTACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTGTTCATGTTCCTCTaGTTTGACGTGCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILFMFL*FDVLSK
Trigger: CTTGCTCAGCACGTCAAACCAGAGGAACATGAACAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTATCGAGCTCCTTCTTCTaGGCTTTAATTTCGGCATGC +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLSSSFF*ALISAC
Trigger: GCATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGA...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCCAGAGATTTCACTTaGTGCTGCAGAGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSRDFT*CCRVSI
Trigger: GATTGACACTCTGCAGCACCAAGTGAAATCTCTGGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGCTATCTATCAGCAGTTaGCATATTGTTGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMLSISS*HIVGLL
Trigger: GAGTAGGCCAACAATATGTCAACTGCTGATAGATAG...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATGCTCCCTCTGATGTaGCTTCACATTTACTTCATC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDMLPLM*LHIYFI
Trigger: GATGAAGTAAATGTGAAGTCACATCAGAGGGAGCAT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAACATCTGAATCCTCCTTaGCCCTTTCACATTCTAATG +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEHLNPP*PFHILM
Trigger: CATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATG...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTTCCCCACTTCTGCTaGAGCACCTTCATATTTTAC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDFPHFC*STFIFY
Trigger: GTAAAATATGAAGGTGCTTCAGCAGAAGTGGGGAAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTAACCTTTCTCATGCTCTaGCTTAGCGAGCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLTFLML*LSELIF
Trigger: AAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGT...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGGCTCTTTCCATTTCATaGGACTTCTCAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQALSIS*DFSMRT
Trigger: AGTTCTCATTGAGAAGTCTCATGAAATGGAAAGAGC...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTCTTTCCATTTCATaGGACTTCTCAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTALSIS*DFSMRT
Trigger: AGTTCTCATTGAGAAGTCTCATGAAATGGAAAGAGC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAGTTGGGAAAGGCCATTaGGTGCCTGTTTTAATCTTT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEVGKGH*VPVLIF
Trigger: AAAGATTAAAACAGGCACTCAATGGCCTTTCCCAAC...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTGCAATGCAGAACTTaGTTAAGAGCAGCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILQCRT*LRAAPS
Trigger: ACTTGGGGCTGCTCTTAATCAAGTTCTGCATTGCAA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAACATTTACTTCATCTTaGATGTGTGTCAAATTTCGC +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKITFTSS*MCVKFR
Trigger: GCGAAATTTGACACACATGCAAGATGAAGTAAATGT...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATTGCTTTTCTTTAGCTaGCAAAAGGGACTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLLFFS*QKGLQL
Trigger: AAGCTGAAGTCCCTTTTGGCAGCTAAAGAAAAGCAA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTAACATAGATCTGCTTTaGATATGGGCTGGTATACCT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECNIDLL*IWAGIP
Trigger: AGGTATACCAGCCCATATGCAAAGCAGATCTATGTT...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATCATACATCCTCTTCTaGACATCTTTTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKISYILF*TSFNAS
Trigger: AGATGCATTAAAAGATGTGCAGAAGAGGATGTATGA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAAGAGATTTCACTTGGTaGTGCAGAGTGTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKRDFTW*CRVSIS
Trigger: GCTGATTGACACTCTGCAGCACCAAGTGAAATCTCT...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTVCPIN*NYFLVL
Trigger: CAGCACCAAGAAGTAATTGCAATTTATCGGACACAC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGAAAGACCATGGAGTTaGACAAAGAATGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDERPWS*TKNVQH
Trigger: GTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAATATTTATTCCAATCTaGTGCATGTCTGTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIIFIPI*CMSVLR
Trigger: CCTAAGAACAGACATGCAGCAGATTGGAATAAATAT...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGGTCTGCATGCTCAGTaGGACAATTGTACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIGLHAQ*DNCTVE
Trigger: TTCTACAGTACAATTGTCCCACTGAGCATGCAGACC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTTGGCCATATGTTCAGTTCTCTCCCTTTGTTaGTATTTTCCGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HSLHLRQRHSSFLLAICSVLSLC*YFPMQS
Trigger: AGACTGCATCGGAAAATACCAACAAAGGGAGAGAAC...TGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCGCTGTTGCAAAGATaGCCCTTTCTTCCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISLLQR*PFLPKF
Trigger: GAACTTTGGAAGAAAGGGCCATCTTTGCAACAGCGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTAGTATGACGTTTGACTaGGTAAAGATAGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECSMTFD*VKIVPE
Trigger: CTCTGGAACTATCTTTACCCAGTCAAACGTCATACT...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATGTGCCAGTTCATTTTaGAGCTTCAGTCGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKCASSF*SFSRSC
Trigger: ACAAGACCGACTGAAGCTCCAAAATGAACTGGCACA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAATTTTTCAGCTGGAATaGAAAGGGCCAACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIIFQLE*KGPTSL
Trigger: CAGCGAAGTTGGCCCTTTCCATTCCAGCTGAAAAAT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATATTTTAACCTCTTCATaGGTTTTAACTGGCACATAC +
Preference number: 4 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHILTSS*VLTGTY
Trigger: GTATGTGCCAGTTAAAACCCATGAAGAGGTTAAAAT...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAATTTTAACCTCTTCATaGGTTTTAACTGGCACATAC +
Preference number: 4 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIILTSS*VLTGTY
Trigger: GTATGTGCCAGTTAAAACCCATGAAGAGGTTAAAAT...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACAATTGATGCAGTTTaGTCACTGTCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDTIDAV*SLSAAL
Trigger: AAGAGCAGCAGACAGTGACCAAACTGCATCAATTGT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTGCAATTACTTCTTaGTGCTGTCTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDIAITS*CCLSAS
Trigger: CGATGCTGACAGACAGCACCAAGAAGTAATTGCAAT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTTTTTAGCAAGGATTaGGGTCACTTTTTCTACATC +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLFSKD*GHFFYI
Trigger: GATGTAGAAAAAGTGACCTCAATCCTTGCTAAAAAG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTATCTATCAGCAGTTaGCATATTGTTGGCCTACTC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILSISS*HIVGLL
Trigger: GAGTAGGCCAACAATATGTCAACTGCTGATAGATAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp CACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTTGGCCATATGTTCACTTCTTTTCGGTTACTaGAATGACTTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: HSLHLRQRHSSFLLAICSLLFGY*NDFLIL
Trigger: TAGGATCAGGAAGTCATTTCAGTAACCGAAAAGAAG...TGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATCTTCTTTTCGGTTACTaGAATGACTTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDLLFGY*NDFLIL
Trigger: TAGGATCAGGAAGTCATTTCAGTAACCGAAAAGAAG...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
CDS-3UTR TCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTCTGCCATATACATCTaGCCTTGTTTAAGAAGCATA +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSAIYI*PCLRSI
Trigger: TATGCTTCTTAAACAAGGTCAGATGTATATGGCAGA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATCAGAGTATGACGTTTaGCTGGGTAAAGATAGTTCC +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKSEYDV*LGKDSS
Trigger: GGAACTATCTTTACCCAGTCAAACGTCATACTCTGA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTTTATCTGTTCATCTaGATCCTCCTTGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILYLFI*ILLDPF
Trigger: GAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATTTCCCCACTTCTGCTaGAGCACCTTCATATTTTAC +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKFPHFC*STFIFY
Trigger: GTAAAATATGAAGGTGCTTCAGCAGAAGTGGGGAAA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTATGTGCTTGCTCCTTaGGGAGCTTATTATCCAAAT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDYVLAP*GAYYPN
Trigger: ATTTGGATAATAAGCTCCTCAAGGAGCAAGCACATA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATTAACTGGCACATACTaGTTACTCATCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLTGTY*LLIIFF
Trigger: GAAGAAGATGATGAGTAATCAGTATGTGCCAGTTAA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGCTCTTTCCATTTCATaGGACTTCTCAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDALSIS*DFSMRT
Trigger: AGTTCTCATTGAGAAGTCTCATGAAATGGAAAGAGC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAAGCTGGCTTTTATaGTTCCAACTTCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECSSWLL*FQLLSQ
Trigger: TTGAGAAAGAAGTTGGAATCATAAAAGCCAGCTTGA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGTTGGGAAAGGCCATTaGGTGCCTGTTTTAATCTTT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIVGKGH*VPVLIF
Trigger: AAAGATTAAAACAGGCACTCAATGGCCTTTCCCAAC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAACTCCAGATAGCTGAATaGAAATGGGTATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKLQIAE*KWVFSL
Trigger: AAGGGAGAATACCCATTTTCATTCAGCTATCTGGAG...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGTTGCTTTTCTTTAGCTaGCAAAAGGGACTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMLLFFS*QKGLQL
Trigger: AAGCTGAAGTCCCTTTTGGCAGCTAAAGAAAAGCAA...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTGCTTTTCTTTAGCTaGCAAAAGGGACTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDLLFFS*QKGLQL
Trigger: AAGCTGAAGTCCCTTTTGGCAGCTAAAGAAAAGCAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAACATAGATCTGCTTTaGATATGGGCTGGTATACCT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDNIDLL*IWAGIP
Trigger: AGGTATACCAGCCCATATGCAAAGCAGATCTATGTT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGTTAAGTTATGTGCTTaGTCCTTGAGGAGCTTATTA +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECVKLCA*SLRSLL
Trigger: TAATAAGCTCCTCAAGGAGCAAGCACATAACTTAAC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAATGCTTCTTTAATCTaGAAATGCTCTGCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQINASLI*KCSARG
Trigger: ACCCCTGGCAGAGCATTTGCAGATTAAAGAAGCATT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGCTCAATGCTGAAATaGAGTAATTCCTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQCSMLK*SNSFSS
Trigger: AGATGAGAAGGAATTACTGCATTTCAGCATTGAGCA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATGCTCAATGCTGAAATaGAGTAATTCCTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTCSMLK*SNSFSS
Trigger: AGATGAGAAGGAATTACTGCATTTCAGCATTGAGCA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDVCPIN*NYFLVL
Trigger: CAGCACCAAGAAGTAATTGCAATTTATCGGACACAC...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAAGACCATGGAGTTaGACAAAGAATGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKERPWS*TKNVQH
Trigger: GTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGTTCTCTCCCTTTGTTaGTATTTTCCGATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKVLSLC*YFPMQS
Trigger: AGACTGCATCGGAAAATACCAACAAAGGGAGAGAAC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTCAAAGCTGACAATTaGGGCGTATTTTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLKADN*GVFYLN
Trigger: ATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACTCAAAGCTGACAATTaGGGCGTATTTTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLKADN*GVFYLN
Trigger: ATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAACAATTGATGCAGTTTaGTCACTGTCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKTIDAV*SLSAAL
Trigger: AAGAGCAGCAGACAGTGACCAAACTGCATCAATTGT...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAACAATTGATGCAGTTTaGTCACTGTCTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQITIDAV*SLSAAL
Trigger: AAGAGCAGCAGACAGTGACCAAACTGCATCAATTGT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTAATTGCAATTACTTCTTaGTGCTGTCTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLIAITS*CCLSAS
Trigger: CGATGCTGACAGACAGCACCAAGAAGTAATTGCAAT...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGCTACACTTAGCTTaGATCTCTAACGATATTTTC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTVLHLA*ISNDIF
Trigger: GAAAATATCGTTAGAGATCCAAGCTAAGTGTAGCAC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAATTTCGTACATCTTTaGCATTCACAGAGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQINFVHL*HSQRPH
Trigger: ATGGGGCCTCTGTGAATGCCAAAGATGTACGAAATT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539319.5
3UTR CAA 72 bp TCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTaGGCCATATGTTCAGGTCTCATAGTCTTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLHLRQRHSSFL*AICSGLIVFLN
Trigger: GTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCTGCCATATACATCTaGCCTTGTTTAAGAAGCATA +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSAIYI*PCLRSI
Trigger: TATGCTTCTTAAACAAGGTCAGATGTATATGGCAGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATATGTGCTTGCTCCTTaGGGAGCTTATTATCCAAAT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKYVLAP*GAYYPN
Trigger: ATTTGGATAATAAGCTCCTCAAGGAGCAAGCACATA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGTCAAGCTGGCTTTTATaGTTCCAACTTCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMSSWLL*FQLLSQ
Trigger: TTGAGAAAGAAGTTGGAATCATAAAAGCCAGCTTGA...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCAAGCTGGCTTTTATaGTTCCAACTTCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSSWLL*FQLLSQ
Trigger: TTGAGAAAGAAGTTGGAATCATAAAAGCCAGCTTGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAACATAGATCTGCTTTaGATATGGGCTGGTATACCT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQINIDLL*IWAGIP
Trigger: AGGTATACCAGCCCATATGCAAAGCAGATCTATGTT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTAATGCTAAAGCTTTaGATTCTGCCACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILMLKL*ILPLCV
Trigger: CACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCAAGAAAATGGGTCTaGATTTGTTTAACTTTACCT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTARKWV*ICLTLP
Trigger: AGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTGCAAGAAAATGGGTCTaGATTTGTTTAACTTTACCT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECARKWV*ICLTLP
Trigger: AGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGC...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIVCPIN*NYFLVL
Trigger: CAGCACCAAGAAGTAATTGCAATTTATCGGACACAC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTAAACGCAATTTCTaGCTTCGATATCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKECKRNF*LRYQKV
Trigger: CACCTTTTGATATCGAAGGCAGAAATTGCGTTTACA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAAGGTCTGCATGCTCAGTaGGACAATTGTACTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQGLHAQ*DNCTVE
Trigger: TTCTACAGTACAATTGTCCCACTGAGCATGCAGACC...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTAAGTATGACGTTTGACTaGGTAAAGATAGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLSMTFD*VKIVPE
Trigger: CTCTGGAACTATCTTTACCCAGTCAAACGTCATACT...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAGTATGACGTTTGACTaGGTAAAGATAGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISMTFD*VKIVPE
Trigger: CTCTGGAACTATCTTTACCCAGTCAAACGTCATACT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATTAAGGGCAAGAAAATaGGTCTGCATTTGTTTAACT +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTLRARK*VCICLT
Trigger: AGTTAAACAAATGCAGACCCATTTTCTTGCCCTTAA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTCAAATTTTTCAGCTaGAATGGAAAGGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDFKFFS*NGKGQL
Trigger: AAGTTGGCCCTTTCCATTCCAGCTGAAAAATTTGAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTTCATGGGTTTTAACTaGCACATACTGATTACTCAT +
Preference number: 4 (lower is better)
Translates to: NYTSTVRPRKTMELHKECFMGFN*HILITH
Trigger: ATGAGTAATCAGTATGTGCCAGTTAAAACCCATGAA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp CATGTAACTTGGCCAGCCAAGTTACAACACATTCCTCACAACTGTATTATGTCTGTCTGCTCTGATAACTaGTCTTTTAGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HVTWPAKLQHIPHNCIMSVCSDN*SFSSFS
Trigger: AGAGAAAGAACTAAAAGACCAGTTATCAGAGCAGAC...AGACATAATACAGTTGTGAGGAATGTGTTGTAACTTGGCTGGCCAAGTTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAATATTTCCTTCTTTTTaGCATGCAAAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTIFPSF*HAKLPH
Trigger: GTGAGGAAGTTTTGCATGCCAAAAAGAAGGAAATAT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
3UTR CAA 72 bp ATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTaGATCCACCTAAAAGTGGCCACCAACCAAATTAAT +
Preference number: 4 (lower is better)
Translates to: IMSQGSEDLKGL*IHLKVATNQIN
Trigger: ATTAATTTGGTTGGTGGCCACTTTTAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR TCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAACTTTTTAGCAAGGATTaGGGTCACTTTTTCTACATC +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKLFSKD*GHFFYI
Trigger: GATGTAGAAAAAGTGACCTCAATCCTTGCTAAAAAG...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR TCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCTGCCATATACATCTaGCCTTGTTTAAGAAGCATA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISAIYI*PCLRSI
Trigger: TATGCTTCTTAAACAAGGTCAGATGTATATGGCAGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAACATTTACTTCATCTTaGATGTGTGTCAAATTTCGC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKETFTSS*MCVKFR
Trigger: GCGAAATTTGACACACATGCAAGATGAAGTAAATGT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATCATACATCCTCTTCTaGACATCTTTTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKESYILF*TSFNAS
Trigger: AGATGCATTAAAAGATGTGCAGAAGAGGATGTATGA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAGCAAGAAAATGGGTCTaGATTTGTTTAACTTTACCT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEARKWV*ICLTLP
Trigger: AGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGC...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGTTAAGTTATGTGCTTaGTCCTTGAGGAGCTTATTA +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKVKLCA*SLRSLL
Trigger: TAATAAGCTCCTCAAGGAGCAAGCACATAACTTAAC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGTTAAGTTATGTGCTTaGTCCTTGAGGAGCTTATTA +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIVKLCA*SLRSLL
Trigger: TAATAAGCTCCTCAAGGAGCAAGCACATAACTTAAC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGCTCGTCTGTTTTTCTaGTTAATGCTCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIARLFF*LMLFPF
Trigger: AAATGGAAAGAGCATTAAGCAGAAAAACAGACGAGC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR GCA 90 bp CACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTTGGCCATATGTTCATGCATATATAATGAGTaGTTGGTTACTATAGTAGCG +
Preference number: 4 (lower is better)
Translates to: HSLHLRQRHSSFLLAICSCIYNE*LVTIVA
Trigger: CGCTACTATAGTAACCAAGCACTCATTATATATGCA...TGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTCTCAAGTAAGGATTaGACTCCAATAGGAATTGAG +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIFSSKD*TPIGIE
Trigger: CTCAATTCCTATTGGAGTGCAATCCTTACTTGAGAA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAATATTTATTCCAATCTaGTGCATGTCTGTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEIFIPI*CMSVLR
Trigger: CCTAAGAACAGACATGCAGCAGATTGGAATAAATAT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATTCAAATTTTTCAGCTaGAATGGAAAGGGCCAACTT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKFKFFS*NGKGQL
Trigger: AAGTTGGCCCTTTCCATTCCAGCTGAAAAATTTGAA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATTCATGGGTTTTAACTaGCACATACTGATTACTCAT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEFMGFN*HILITH
Trigger: ATGAGTAATCAGTATGTGCCAGTTAAAACCCATGAA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTTTAACCTCTTCATaGGTTTTAACTGGCACATAC +
Preference number: 4 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDILTSS*VLTGTY
Trigger: GTATGTGCCAGTTAAAACCCATGAAGAGGTTAAAAT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTCAAAGCTGACAATTaGGGCGTATTTTACCTTAAT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILKADN*GVFYLN
Trigger: ATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGTCTGCTCTGATAACTaGTCTTTTAGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKVCSDN*SFSSFS
Trigger: AGAGAAAGAACTAAAAGACCAGTTATCAGAGCAGAC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGTCTGCTCTGATAACTaGTCTTTTAGTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIVCSDN*SFSSFS
Trigger: AGAGAAAGAACTAAAAGACCAGTTATCAGAGCAGAC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp CACTCATTACATCTTAGACAACGTCACTCTTCTTTCCTCTTGGCCATATGTTCAATATTTCCTTCTTTTTaGCATGCAAAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HSLHLRQRHSSFLLAICSIFPSF*HAKLPH
Trigger: GTGAGGAAGTTTTGCATGCCAAAAAGAAGGAAATAT...TGAACATATGGCCAAGAGGAAAGAAGAGTGACGTTGTCTAAGATGTAATGAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAATATTTCCTTCTTTTTaGCATGCAAAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEIFPSF*HAKLPH
Trigger: GTGAGGAAGTTTTGCATGCCAAAAAGAAGGAAATAT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CCA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGGGATTTAAAAATCTaGTTCGGGATGTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEWDLKI*FGMFKD
Trigger: ATCTTTGAACATCCCGAACCAGATTTTTAAATCCCA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAACATTTACTTCATCTTaGATGTGTGTCAAATTTCGC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQITFTSS*MCVKFR
Trigger: GCGAAATTTGACACACATGCAAGATGAAGTAAATGT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR GCA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAACTAATGCTAAAGCTTTaGATTCTGCCACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQLMLKL*ILPLCV
Trigger: CACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAG...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR GCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCATACATCCTCTTCTaGACATCTTTTAATGCATCT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISYILF*TSFNAS
Trigger: AGATGCATTAAAAGATGTGCAGAAGAGGATGTATGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTAAGGGCAAGAAAATaGGTCTGCATTTGTTTAACT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILRARK*VCICLT
Trigger: AGTTAAACAAATGCAGACCCATTTTCTTGCCCTTAA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTCATGGGTTTTAACTaGCACATACTGATTACTCAT +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIFMGFN*HILITH
Trigger: ATGAGTAATCAGTATGTGCCAGTTAAAACCCATGAA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CCA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAATATTTCCTTCTTTTTaGCATGCAAAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIIFPSF*HAKLPH
Trigger: GTGAGGAAGTTTTGCATGCCAAAAAGAAGGAAATAT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR TCA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAAAAACAGAACTCATGCTaGAGGACGACATTAATCATA +
Preference number: 4 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQKQNSC*RTTLII
Trigger: TATGATTAATGTCGTCCTTCAGCATGAGTTCTGTTT...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CCA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAATTCATGGGTTTTAACTaGCACATACTGATTACTCAT +
Preference number: 4 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQFMGFN*HILITH
Trigger: ATGAGTAATCAGTATGTGCCAGTTAAAACCCATGAA...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS TCA 90 bp CAGACGACGCGGGGCCGGGCACGTCCTGCCTCCTCAGGCGGGACTTaGGGCTCTTCATGGCTAACTCTTGCCTGGCCCCCGCGCGAACCT +
Preference number: 5 (lower is better)
Translates to: QTTRGRARPASSGGT*GSSWLTLAWPPREP
Trigger: AGGTTCGCGCGGGGGCCAGGCAAGAGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAGGCAGGACGTGCCCGGCCCCGCGTCGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 90 bp GCTAACTCTTGCCTGGCCCCCGCGCGAACCTTAAAGGCTGCGGAGTaGCAGCGCGCAAGGAGTAGACGGCAGCGGCTGCAGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: ANSCLAPARTLKAAE*QRARSRRQRLQQRR
Trigger: CCGCCTCTGCTGCAGCCGCTGCCGTCTACTCCTTGCGCGCTGGCACTCCGCAGCCTTTAAGGTTCGCGCGGGGGCCAGGCAAGAGTTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 90 bp TCCTGCCTCCTCAGGCGGGACTTGAGGCTCTTCATGGCTAACTCTTaGCTGGCCCCCGCGCGAACCTTAAAGGCTGCGGAGTGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SCLLRRDLRLFMANS*LAPARTLKAAECQR
Trigger: GCGCTGGCACTCCGCAGCCTTTAAGGTTCGCGCGGGGGCCAGGCAAGAGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAGGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 90 bp CTGTCAGCATCGGCCAGCTGTTGCTCCAGAGATTTCACTTGGTGCTaGAGAGTGTCAATCAGCTGGCTCTGCCTCTTGGTGGGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: LSASASCCSRDFTWC*RVSISWLCLLVGFP
Trigger: TGGGAACCCCACCAAGAGGCAGAGCCAGCTGATTGACACTCTGCAGCACCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS CCA 90 bp TGCTGTCTGTCAGCATCGGCCAGCTGTTGCTCCAGAGATTTCACTTaGTGCTGCAGAGTGTCAATCAGCTGGCTCTGCCTCTTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: CCLSASASCCSRDFT*CCRVSISWLCLLVG
Trigger: CCCCACCAAGAGGCAGAGCCAGCTGATTGACACTCTGCAGCACCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCTGACAGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS GCA 90 bp TGTCTGTCAGCATCGGCCAGCTGTTGCTCCAGAGATTTCACTTGGTaGTGCAGAGTGTCAATCAGCTGGCTCTGCCTCTTGGTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: CLSASASCCSRDFTW*CRVSISWLCLLVGF
Trigger: GAACCCCACCAAGAGGCAGAGCCAGCTGATTGACACTCTGCAGCACCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCTGACAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTGCAGTGGCGAGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTCSGEI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCTCGCCACTGCA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCCGCCCGTCTACATCTTaGGCATTCACAGAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSRPSTS*AFTEAP
Trigger: TGGGGCCTCTGTGAATGCCAAAGATGTAGACGGGCG...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS CCA 90 bp CCATGGTTTCAGGCATCCACTGGGGATCTTGGAACATACCCTCAGTaGATAAGAGAGGGACTACTCTACAGGCAGGGCTTTTACTGCCCT +
Preference number: 5 (lower is better)
Translates to: PWFQASTGDLGTYPQ*IREGLLYRQGFYCP
Trigger: AGGGCAGTAAAAGCCCTGCCTGTAGAGTAGTCCCTCTCTTATCCACTGAGGGTATGTTCCAAGATCCCCAGTGGATGCCTGAAACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCGCCCGTCTACATCTTaGGCATTCACAGAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKRPSTS*AFTEAP
Trigger: TGGGGCCTCTGTGAATGCCAAAGATGTAGACGGGCG...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCACGCCCGTCTACATCTTaGGCATTCACAGAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPARPSTS*AFTEAP
Trigger: TGGGGCCTCTGTGAATGCCAAAGATGTAGACGGGCG...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTTAGCGAGCTCATCTTaGCCTCGTGCTCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSLASSS*PRALPG
Trigger: GCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTTAGCGAGCTCATCTTaGCCTCGTGCTCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKLASSS*PRALPG
Trigger: GCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATTAGCGAGCTCATCTTaGCCTCGTGCTCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKILASSS*PRALPG
Trigger: GCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAAGCCCCTGCCGCATTaGTATGATCTGGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPAKPLPH*YDLEQS
Trigger: GCTCTGCTCCAGATCATACAAATGCGGCAGGGGCTT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS TCA 90 bp TTGGCCAAGATTTCAGCATTACTATCCTGCACCTTTCTCATGCTCTaGCTTAGCGAGCTCATCTTTGCCTCGTGCTCTGCCAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: LAKISALLSCTFLML*LSELIFASCSARLM
Trigger: CATCAGCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGGATAGTAATGCTGAAATCTTGGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS TCA 90 bp GCTATCTTTCAAAGTTGTCCCTTTGAGGGACCCCACTGGAAAACTTaGACAGCACTCTGCATCCTGCTGCCTCAACACTGCAACACAGAC +
Preference number: 5 (lower is better)
Translates to: AIFQSCPFEGPHWKT*TALCILLPQHCNTD
Trigger: GTCTGTGTTGCAGTGTTGAGGCAGCAGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGGTCCCTCAAAGGGACAACTTTGAAAGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS GCA 90 bp TGTAGTTGGCCAAGATTTCAGCATTACTATCCTGCACCTTTCTCATaGTCTGACTTAGCGAGCTCATCTTTGCCTCGTGCTCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: CSWPRFQHYYPAPFS*SDLASSSLPRALPG
Trigger: GCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGGATAGTAATGCTGAAATCTTGGCCAACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCGTGTGCCAGTTCATTTaGGAGCTTCAGTCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSVCQFI*ELQSVL
Trigger: CAAGACCGACTGAAGCTCCAAAATGAACTGGCACAC...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCGCTGACAATTCTTTaGCCTGGCCTTCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSLTIL*PGLPSL
Trigger: CAGAGATGGAAGGCCAGGCAAAAGAATTGTCAGCGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGAGCATCGGCCAGCTGTaGCTCCAGAGATTTCACTTG +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKSIGQL*LQRFHL
Trigger: CAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCT...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAAGCATCGGCCAGCTGTaGCTCCAGAGATTTCACTTG +
Preference number: 5 (lower is better)
Translates to: STVRPRKTMELHKECSAPSIGQL*LQRFHL
Trigger: CAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCT...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCATCGGCCAGCTGTaGCTCCAGAGATTTCACTTG +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPASIGQL*LQRFHL
Trigger: CAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAGCCCCTGCCGCATTaGTATGATCTGGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIKPLPH*YDLEQS
Trigger: GCTCTGCTCCAGATCATACAAATGCGGCAGGGGCTT...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCGATGGAGTCTTGCTATaGCCCAAGCTGGAGTGCAGT +
Preference number: 5 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSDGVLL*PKLECS
Trigger: ACTGCACTCCAGCTTGGGCAATAGCAAGACTCCATC...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 90 bp ATCCATGTGACCCTGTGCAGCACTAAGAAGGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTGTCTGTCAGCATCGGCCAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: IHVTLCSTKKVCPIN*NYFLVLSVSIGQLL
Trigger: CAACAGCTGGCCGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAGGGTCACATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS CCA 90 bp GGAATTAACATCCGCTCCTCTATCTATCAGCAGTTGACATATTGTTaGCCTACTCATCTGAGTAGCCAGAACAAGTGGTGTCCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: GINIRSSIYQQLTYC*PTHLSSQNKWCPPV
Trigger: GACGGGCGGACACCACTTGTTCTGGCTACTCAGATGAGTAGGCCAACAATATGTCAACTGCTGATAGATAGAGGAGCGGATGTTAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000558758.5
ENST00000560167.1
ENST00000560441.5
ENST00000560523.5
CDS CCA 90 bp ATAGGGTTCATTCAGCAGGTCCTATCCATGGTTTCAGGCATCCACTaGGGATCTTGGAACATACCCTCAGTGGATAAGAGAGGGACTACT +
Preference number: 5 (lower is better)
Translates to: IGFIQQVLSMVSGIH*GSWNIPSVDKRGTT
Trigger: AGTAGTCCCTCTCTTATCCACTGAGGGTATGTTCCAAGATCCCCAGTGGATGCCTGAAACCATGGATAGGACCTGCTGAATGAACCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS-3UTR CAA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTCTCCTCAGGCGGGACTaGAGGCTCTTCATGGCTAAC +
Preference number: 5 (lower is better)
Translates to: NYTSTVRPRKTMELHKECLLRRD*RLFMAN
Trigger: GTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAG...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCCTTCCACATCTAGTTaGCCTGGATTGACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKPSTSS*PGLTPF
Trigger: AAAGGGGGTCAATCCAGGCAAACTAGATGTGGAAGG...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGTGTGCCAGTTCATTTaGGAGCTTCAGTCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPAVCQFI*ELQSVL
Trigger: CAAGACCGACTGAAGCTCCAAAATGAACTGGCACAC...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTTAGCGAGCTCATCTTaGCCTCGTGCTCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLASSS*PRALPG
Trigger: GCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAACTTGTGTAGGTGAGTaGGGAAAGGCCATTGAGTGC +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPATCVGE*GKAIEC
Trigger: GCACTCAATGGCCTTTCCCAACTCACCTACACAAGT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAACCCCACTGGAAAACTaGAACAGCACTCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPATPLEN*NSTLHP
Trigger: AGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGGT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTTCAAAGTTGTCCCTTaGAGGGACCCCACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTFKVVP*RDPTGK
Trigger: TTTTCCAGTGGGGTCCCTCAAAGGGACAACTTTGAA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCCTTGCAATGCAGAACTaGATTAAGAGCAGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSLAMQN*IKSSPK
Trigger: CTTGGGGCTGCTCTTAATCAAGTTCTGCATTGCAAG...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCACTCAAGATTCCCCTTaGAGGTCACAACATGGAAGA +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTTQDSP*RSQHGR
Trigger: TCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAGT...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCAGCAGTTGACATATaGTTGGCCTACTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSAVDI*LAYSSE
Trigger: CTCAGATGAGTAGGCCAACAATATGTCAACTGCTGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAGTGTGCCAGTTCATTTaGGAGCTTCAGTCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIVCQFI*ELQSVL
Trigger: CAAGACCGACTGAAGCTCCAAAATGAACTGGCACAC...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATCGCTGACAATTCTTTaGCCTGGCCTTCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKISLTIL*PGLPSL
Trigger: CAGAGATGGAAGGCCAGGCAAAAGAATTGTCAGCGA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCACTTGCAATGCAGAACTaGATTAAGAGCAGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPALAMQN*IKSSPK
Trigger: CTTGGGGCTGCTCTTAATCAAGTTCTGCATTGCAAG...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTCCTCAGGCGGGACTaGAGGCTCTTCATGGCTAAC +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILLRRD*RLFMAN
Trigger: GTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAACTCAAGATTCCCCTTaGAGGTCACAACATGGAAGA +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPATQDSP*RSQHGR
Trigger: TCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAGT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATCAGCAGTTGACATATaGTTGGCCTACTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: STVRPRKTMELHKECSAPSAVDI*LAYSSE
Trigger: CTCAGATGAGTAGGCCAACAATATGTCAACTGCTGA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGAGTTCTCTCCCTTTGTaGGTATTTTCCGATGCAGTC +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKSSLPL*VFSDAV
Trigger: GACTGCATCGGAAAATACCAACAAAGGGAGAGAACT...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTGTCAAATTTCGCTGTaGCAAAGATGGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTCQISL*QRWPFL
Trigger: AAGAAAGGGCCATCTTTGCAACAGCGAAATTTGACA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAACTTGTGTAGGTGAGTaGGGAAAGGCCATTGAGTGC +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSTCVGE*GKAIEC
Trigger: GCACTCAATGGCCTTTCCCAACTCACCTACACAAGT...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCGGTGTGTCCGATAAATaGCAATTACTTCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSGVSDK*QLLLGA
Trigger: AGCACCAAGAAGTAATTGCAATTTATCGGACACACC...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS TCA 90 bp GTGCTGTCTGTCAGCATCCTAGAAATGTGGAAAGATGGACAGATGTaGCTATCAGCGTTCACATTTCCAAACTTTGGACAATGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: VLSVSILEMWKDGQM*LSAFTFPNFGQCSG
Trigger: GCCTGAGCATTGTCCAAAGTTTGGAAATGTGAACGCTGATAGTCACATCTGTCCATCTTTCCACATTTCTAGGATGCTGACAGACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 90 bp ATCCATGTGACCCTGTGCAGCACTAAGAAGGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTGTCTGTCAGCATCCTAGAAATGTGG +
Preference number: 5 (lower is better)
Translates to: IHVTLCSTKKVCPIN*NYFLVLSVSILEMW
Trigger: CCACATTTCTAGGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAGGGTCACATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS-3UTR CAA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTCCTTCCACATCTAGTTaGCCTGGATTGACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: NYTSTVRPRKTMELHKECPSTSS*PGLTPF
Trigger: AAAGGGGGTCAATCCAGGCAAACTAGATGTGGAAGG...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACCTTCCACATCTAGTTaGCCTGGATTGACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTPSTSS*PGLTPF
Trigger: AAAGGGGGTCAATCCAGGCAAACTAGATGTGGAAGG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCACAAAGTTCTCTCCCTTaGTTGGTATTTTCCGATGCA +
Preference number: 5 (lower is better)
Translates to: STVRPRKTMELHKECSAPQSSLP*LVFSDA
Trigger: TGCATCGGAAAATACCAACAAAGGGAGAGAACTTTG...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTGTCAAATTTCGCTGTaGCAAAGATGGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKCQISL*QRWPFL
Trigger: AAGAAAGGGCCATCTTTGCAACAGCGAAATTTGACA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCTCATCTGAATCCTCCTaGACCCTTTCACATTCTAAT +
Preference number: 5 (lower is better)
Translates to: QHSKAQKDHGVAQRMFSTSSESS*TLSHSN
Trigger: ATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGA...GGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTCGCTGACAATTCTTTaGCCTGGCCTTCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSLTIL*PGLPSL
Trigger: CAGAGATGGAAGGCCAGGCAAAAGAATTGTCAGCGA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTTATGTGCTTGCTCCTaGAGGAGCTTATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSLCACS*RSLLSK
Trigger: TTTGGATAATAAGCTCCTCAAGGAGCAAGCACATAA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCTTTCTCGTAACACCTTaGCATACTCTTCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSFLVTP*HTLQFF
Trigger: GAAGAACTGAAGAGTATGCAAAGGTGTTACGAGAAA...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCGAGACTTCTTCCATTTaGTTTTGGCTTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSETSSI*FWLSSS
Trigger: GGAAGAAGAAAGCCAAAACAAAATGGAAGAAGTCTC...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCAGTTGGGAAAGGCCATaGAGTGCCTGTTTTAATCTT +
Preference number: 5 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSSWERP*SACFNL
Trigger: AAGATTAAAACAGGCACTCAATGGCCTTTCCCAACT...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAACTTGTGTAGGTGAGTaGGGAAAGGCCATTGAGTGC +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTTCVGE*GKAIEC
Trigger: GCACTCAATGGCCTTTCCCAACTCACCTACACAAGT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGACTTGTGTAGGTGAGTaGGGAAAGGCCATTGAGTGC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQTCVGE*GKAIEC
Trigger: GCACTCAATGGCCTTTCCCAACTCACCTACACAAGT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAGGTGTGTCCGATAAATaGCAATTACTTCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPAGVSDK*QLLLGA
Trigger: AGCACCAAGAAGTAATTGCAATTTATCGGACACACC...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAAGCCCCTGCCGCATTaGTATGATCTGGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIKPLPH*YDLEQS
Trigger: GCTCTGCTCCAGATCATACAAATGCGGCAGGGGCTT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 90 bp TTTCGGCATGCAGTGTCACAATCTCTTCTTGGCCTTTTCTGTAGTTaGCCAAGATTTCAGCATTACTATCCTGCACCTTTCTCATGCTCT +
Preference number: 5 (lower is better)
Translates to: FRHAVSQSLLGLFCS*PRFQHYYPAPFSCS
Trigger: AGAGCATGAGAAAGGTGCAGGATAGTAATGCTGAAATCTTGGCCAACTACAGAAAAGGCCAAGAAGAGATTGTGACACTGCATGCCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTGCTCAGTGGGACAATaGTACTGTAGAAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKCSVGQ*YCRSFC
Trigger: ACAAAAACTTCTACAGTACAATTGTCCCACTGAGCA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCTCTATCTATCAGCAGTaGACATATTGTTGGCCTACT +
Preference number: 5 (lower is better)
Translates to: YQHSKAQKDHGVAQRMFSSIYQQ*TYCWPT
Trigger: AGTAGGCCAACAATATGTCAACTGCTGATAGATAGA...GCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATACAAAGTTCTCTCCCTTaGTTGGTATTTTCCGATGCA +
Preference number: 5 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKIQSSLP*LVFSDA
Trigger: TGCATCGGAAAATACCAACAAAGGGAGAGAACTTTG...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATATGTCAAATTTCGCTGTaGCAAAGATGGCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: KAQKDHGVAQRMFSTSKICQISL*QRWPFL
Trigger: AAGAAAGGGCCATCTTTGCAACAGCGAAATTTGACA...TATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCCACATTTACTTCATCTaGCATGTGTGTCAAATTTCG +
Preference number: 5 (lower is better)
Translates to: HSKAQKDHGVAQRMFSTSHIYFI*HVCQIS
Trigger: CGAAATTTGACACACATGCAAGATGAAGTAAATGTG...GCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCATCAGTCGGTCTTGTTTaGCTGACTCACAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSSVGLV*LTHRKF
Trigger: GAACTTTCTGTGAGTCAGCAAAACAAGACCGACTGA...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCATTGCATTCTGCCACTTaGTGTGCCAGTTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSLHSAT*CASSFW
Trigger: CCAAAATGAACTGGCACACAAAGTGGCAGAATGCAA...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCATCTAATGCTAAAGCTTaGCATTCTGCCACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: STVRPRKTMELHKECSAPSNAKA*HSATLC
Trigger: ACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGA...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATCATCTGAATCCTCCTaGACCCTTTCACATTCTAAT +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPASSESS*TLSHSN
Trigger: ATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCGCTGACAATTCTTTaGCCTGGCCTTCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSLTIL*PGLPSL
Trigger: CAGAGATGGAAGGCCAGGCAAAAGAATTGTCAGCGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTTATGTGCTTGCTCCTaGAGGAGCTTATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKLCACS*RSLLSK
Trigger: TTTGGATAATAAGCTCCTCAAGGAGCAAGCACATAA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGTACCTTAATGCATTCTaGTATTGTGTCGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKYLNAF*YCVELL
Trigger: AAGGAGCTCGACACAATACAAGAATGCATTAAGGTA...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAATCTCAGAAGTCTGTTaGGCATTTTCTTCTACTAGC +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPAISEVC*AFSSTS
Trigger: GCTAGTAGAAGAAAATGCCAAACAGACTTCTGAGAT...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp ACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCATTTCTCGTAACACCTTaGCATACTCTTCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TVRPRKTMELHKECSAPAFLVTP*HTLQFF
Trigger: GAAGAACTGAAGAGTATGCAAAGGTGTTACGAGAAA...TGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCACTGATCCTTAATTTCTaGCTCAATGCTGAAATGCAG +
Preference number: 5 (lower is better)
Translates to: STVRPRKTMELHKECSAPLILNF*LNAEMQ
Trigger: CTGCATTTCAGCATTGAGCAAGAAATTAAGGATCAG...TGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAGCATCGGCCAGCTGTaGCTCCAGAGATTTCACTTG +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISIGQL*LQRFHL
Trigger: CAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGATCTGAAAGGTCTTTaGATCCACCTAAAAGTGGCC +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSDLKGL*IHLKVA
Trigger: GGCCACTTTTAGGTGGATCAAAAGACCTTTCAGATC...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACCCCACTGGAAAACTaGAACAGCACTCTGCATCCT +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDTPLEN*NSTLHP
Trigger: AGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGGT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAACTCAAGATTCCCCTTaGAGGTCACAACATGGAAGA +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTTQDSP*RSQHGR
Trigger: TCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAGT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATTGCTCAGTGGGACAATaGTACTGTAGAAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHCSVGQ*YCRSFC
Trigger: ACAAAAACTTCTACAGTACAATTGTCCCACTGAGCA...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAGTTCTCTCCCTTTGTaGGTATTTTCCGATGCAGTC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSSLPL*VFSDAV
Trigger: GACTGCATCGGAAAATACCAACAAAGGGAGAGAACT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGCACATTTACTTCATCTaGCATGTGTGTCAAATTTCG +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKHIYFI*HVCQIS
Trigger: CGAAATTTGACACACATGCAAGATGAAGTAAATGTG...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTCAGTCGGTCTTGTTTaGCTGACTCACAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQSVGLV*LTHRKF
Trigger: GAACTTTCTGTGAGTCAGCAAAACAAGACCGACTGA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGTGTGCCAGTTCATTTaGGAGCTTCAGTCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIVCQFI*ELQSVL
Trigger: CAAGACCGACTGAAGCTCCAAAATGAACTGGCACAC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TTCAGGTCTCATAGTCTTTCTGAACACAGAATGGCAGTGGCCAGCATTGTCCATTTTTCTTCTATCAGCTaGCCTTCATCCCTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: FRSHSLSEHRMAVASIVHFSSIS*PSSLLN
Trigger: GTTTAAGAGGGATGAAGGCAAGCTGATAGAAGAAAA...ATGGACAATGCTGGCCACTGCCATTCTGTGTTCAGAAAGACTATGAGACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp AGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGAATTCTCTGTTAGTTTaGGCTAACGTGTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: SKAQKDHGVAQRMFSTSKNSLLV*ANVSFS
Trigger: ACTGAATGACACGTTAGCCAAAACTAACAGAGAATT...CTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGTCACAATCTCTTCTaGGCCTTTTCTGTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQCHNLF*AFSVVG
Trigger: GCCAACTACAGAAAAGGCCAAGAAGAGATTGTGACA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATGTCACAATCTCTTCTaGGCCTTTTCTGTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTCHNLF*AFSVVG
Trigger: GCCAACTACAGAAAAGGCCAAGAAGAGATTGTGACA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAAATTGCAATTACTTCTaGGTGCTGTCTGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSNCNYF*VLSVSI
Trigger: GATGCTGACAGACAGCACCAAGAAGTAATTGCAATT...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCTCCCTTGTACTTaGGAGTCCATCGTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQILPCT*ESIVSY
Trigger: GTAGGAAACGATGGACTCCAAAGTACAAGGGAGAAT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTAATGGGTATTCTCCCTaGTACTTTGGAGTCCATCGT +
Preference number: 5 (lower is better)
Translates to: NYTSTVRPRKTMELHKECNGYSP*YFGVHR
Trigger: ACGATGGACTCCAAAGTACAAGGGAGAATACCCATT...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTATGGCAGTGGCCAGCATaGTCCATTATCTATGTTCCG +
Preference number: 5 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLWQWPA*SIIYVP
Trigger: CGGAACATAGATAATGGACAATGCTGGCCACTGCCA...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTCAAAGTTGTCCCTTaGAGGGACCCCACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDFKVVP*RDPTGK
Trigger: TTTTCCAGTGGGGTCCCTCAAAGGGACAACTTTGAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS TCA 90 bp TCTAATCTGCTCTTAACCTGTTCATGTTCCTCTGGTTTGACGTGCTaGGCAAGCTTGGCCTTAACATTCTCAAGTTCTCTCTTTAACTGT +
Preference number: 5 (lower is better)
Translates to: SNLLLTCSCSSGLTC*ASLALTFSSSLFNC
Trigger: ACAGTTAAAGAGAGAACTTGAGAATGTTAAGGCCAAGCTTGCTCAGCACGTCAAACCAGAGGAACATGAACAGGTTAAGAGCAGATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAACTCAAGATTCCCCTTaGAGGTCACAACATGGAAGA +
Preference number: 5 (lower is better)
Translates to: FNYTSTVRPRKTMELHKETQDSP*RSQHGR
Trigger: TCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAGT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCATGCTCAGTGGGACAATaGTACTGTAGAAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSCSVGQ*YCRSFC
Trigger: ACAAAAACTTCTACAGTACAATTGTCCCACTGAGCA...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATCAGCAGTTGACATATaGTTGGCCTACTCATCTGAG +
Preference number: 5 (lower is better)
Translates to: FNYTSTVRPRKTMELHKESAVDI*LAYSSE
Trigger: CTCAGATGAGTAGGCCAACAATATGTCAACTGCTGA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCATCTATCTATCAGCAGTaGACATATTGTTGGCCTACT +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSSIYQQ*TYCWPT
Trigger: AGTAGGCCAACAATATGTCAACTGCTGATAGATAGA...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGTCAGTCGGTCTTGTTTaGCTGACTCACAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMSVGLV*LTHRKF
Trigger: GAACTTTCTGTGAGTCAGCAAAACAAGACCGACTGA...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCATTATGTGCTTGCTCCTaGAGGAGCTTATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSLCACS*RSLLSK
Trigger: TTTGGATAATAAGCTCCTCAAGGAGCAAGCACATAA...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTCACAATCTCTTCTaGGCCTTTTCTGTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: FNYTSTVRPRKTMELHKECHNLF*AFSVVG
Trigger: GCCAACTACAGAAAAGGCCAAGAAGAGATTGTGACA...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAAGTTGGGAAAGGCCATaGAGTGCCTGTTTTAATCTT +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSWERP*SACFNL
Trigger: AAGATTAAAACAGGCACTCAATGGCCTTTCCCAACT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAAATTGCAATTACTTCTaGGTGCTGTCTGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTNCNYF*VLSVSI
Trigger: GATGCTGACAGACAGCACCAAGAAGTAATTGCAATT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAATTGCAATTACTTCTaGGTGCTGTCTGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQNCNYF*VLSVSI
Trigger: GATGCTGACAGACAGCACCAAGAAGTAATTGCAATT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAACACTCTTCTTTCCTCTaGGCCATATGTTCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKHSSFL*AICSGL
Trigger: GAGACCTGAACATATGGCCAAGAGGAAAGAAGAGTG...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAATTTCGTACATCTTaGGCATTCACAGAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDKFRTS*AFTEAP
Trigger: TGGGGCCTCTGTGAATGCCAAAGATGTACGAAATTT...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539319.5
CDS CCA 90 bp CCTGAGGCTGCTTCACTTGTTAAGTGTTCTTTAAGGGCAAGAAAATaGGTCTGCATTTGTTTAACTTTACCTTCTGACTCATACATCCTC +
Preference number: 5 (lower is better)
Translates to: PEAASLVKCSLRARK*VCICLTLPSDSYIL
Trigger: GAGGATGTATGAGTCAGAAGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGCCCTTAAAGAACACTTAACAAGTGAAGCAGCCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560441.5
CDS CCA 90 bp TATTTTACCTTAATGCATTCTTGTATTGTGTCGAGCTCCTTCTTCTaGGCTTTAATTTCGGCATGCAGTGTCACAATCTCTTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: YFTLMHSCIVSSSFF*ALISACSVTISSWP
Trigger: AGGCCAAGAAGAGATTGTGACACTGCATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGACACAATACAAGAATGCATTAAGGTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 90 bp CTCTGTTGCTTTAAATTTTCTCTCGCACTCCTCAAAGCTGACAATTaGGGCGTATTTTACCTTAATGCATTCTTGTATTGTGTCGAGCTC +
Preference number: 5 (lower is better)
Translates to: LCCFKFSLALLKADN*GVFYLNAFLYCVEL
Trigger: GAGCTCGACACAATACAAGAATGCATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCGAGAGAAAATTTAAAGCAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTGCTCAGTGGGACAATaGTACTGTAGAAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQCSVGQ*YCRSFC
Trigger: ACAAAAACTTCTACAGTACAATTGTCCCACTGAGCA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAGTTCTCTCCCTTTGTaGGTATTTTCCGATGCAGTC +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISSLPL*VFSDAV
Trigger: GACTGCATCGGAAAATACCAACAAAGGGAGAGAACT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAACAAAGTTCTCTCCCTTaGTTGGTATTTTCCGATGCA +
Preference number: 5 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEQSSLP*LVFSDA
Trigger: TGCATCGGAAAATACCAACAAAGGGAGAGAACTTTG...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTCACACAGAAAGTTCGCATaGCTTCTAACTCTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: YTSTVRPRKTMELHKECSHRKFA*LLTLSL
Trigger: TAAAGAAAGAGTTAGAAGCAATGCGAACTTTCTGTG...TGAACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCAGTCGGTCTTGTTTaGCTGACTCACAGAAAGTTC +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISVGLV*LTHRKF
Trigger: GAACTTTCTGTGAGTCAGCAAAACAAGACCGACTGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATTGCATTCTGCCACTTaGTGTGCCAGTTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKLHSAT*CASSFW
Trigger: CCAAAATGAACTGGCACACAAAGTGGCAGAATGCAA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATTGCATTCTGCCACTTaGTGTGCCAGTTCATTTTGG +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILHSAT*CASSFW
Trigger: CCAAAATGAACTGGCACACAAAGTGGCAGAATGCAA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATCTAATGCTAAAGCTTaGCATTCTGCCACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTSNAKA*HSATLC
Trigger: ACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATTTTCTTCTATCAGCTaGCCTTCATCCCTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTFSSIS*PSSLLN
Trigger: GTTTAAGAGGGATGAAGGCAAGCTGATAGAAGAAAA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTTTTCTTCTATCAGCTaGCCTTCATCCCTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQFSSIS*PSSLLN
Trigger: GTTTAAGAGGGATGAAGGCAAGCTGATAGAAGAAAA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAATGTTTTTCTTCTATCAGCTaGCCTTCATCCCTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: NYTSTVRPRKTMELHKECFSSIS*PSSLLN
Trigger: GTTTAAGAGGGATGAAGGCAAGCTGATAGAAGAAAA...ACATTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATGTCACAATCTCTTCTaGGCCTTTTCTGTAGTTGGC +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQICHNLF*AFSVVG
Trigger: GCCAACTACAGAAAAGGCCAAGAAGAGATTGTGACA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACATACCTTAATGCATTCTaGTATTGTGTCGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTYLNAF*YCVELL
Trigger: AAGGAGCTCGACACAATACAAGAATGCATTAAGGTA...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATCTCAGAAGTCTGTTaGGCATTTTCTTCTACTAGC +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQISEVC*AFSSTS
Trigger: GCTAGTAGAAGAAAATGCCAAACAGACTTCTGAGAT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGTTGATTCTCCAACAATaGATGCAGTTTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLILQQ*MQFGHC
Trigger: ACAGTGACCAAACTGCATCAATTGTTGGAGAATCAA...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAGACTTCTTCCATTTaGTTTTGGCTTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTETSSI*FWLSSS
Trigger: GGAAGAAGAAAGCCAAAACAAAATGGAAGAAGTCTC...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGCTGATCCTTAATTTCTaGCTCAATGCTGAAATGCAG +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQLILNF*LNAEMQ
Trigger: CTGCATTTCAGCATTGAGCAAGAAATTAAGGATCAG...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAAAGTTGGGAAAGGCCATaGAGTGCCTGTTTTAATCTT +
Preference number: 5 (lower is better)
Translates to: FNYTSTVRPRKTMELHKESWERP*SACFNL
Trigger: AAGATTAAAACAGGCACTCAATGGCCTTTCCCAACT...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp CATGTAACTTGGCCAGCCAAGTTACAACACATTCCTCACAACTGTATTATGTCTACTGTAACATGTAACTaGGCCAGCCAAGTTACAACA +
Preference number: 5 (lower is better)
Translates to: HVTWPAKLQHIPHNCIMSTVTCN*ASQVTT
Trigger: TGTTGTAACTTGGCTGGCCAAGTTACATGTTACAGT...AGACATAATACAGTTGTGAGGAATGTGTTGTAACTTGGCTGGCCAAGTTACATG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 90 bp GCTGCTTCACTTGTTAAGTGTTCTTTAAGGGCAAGAAAATGGGTCTaGATTTGTTTAACTTTACCTTCTGACTCATACATCCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: AASLVKCSLRARKWV*ICLTLPSDSYILFC
Trigger: GCAGAAGAGGATGTATGAGTCAGAAGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGCCCTTAAAGAACACTTAACAAGTGAAGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560441.5
CDS GCA 90 bp ATTCAGGTGAGAGGTACAAAAATGACACAGGATGATGATCAGAATTaGTCAAGGTACCTGATTACTTTCTCTTCAGGGTTTGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: IQVRGTKMTQDDDQN*SRYLITFSSGFANA
Trigger: AGCATTTGCAAACCCTGAAGAGAAAGTAATCAGGTACCTTGAGCAATTCTGATCATCATCCTGTGTCATTTTTGTACCTCTCACCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559183.1
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACACACAGAAAGTTCGCATaGCTTCTAACTCTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTHRKFA*LLTLSL
Trigger: TAAAGAAAGAGTTAGAAGCAATGCGAACTTTCTGTG...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTCATCTGAATCCTCCTaGACCCTTTCACATTCTAAT +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDSSESS*TLSHSN
Trigger: ATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTATGTGCTTGCTCCTaGAGGAGCTTATTATCCAAA +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDLCACS*RSLLSK
Trigger: TTTGGATAATAAGCTCCTCAAGGAGCAAGCACATAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CCAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAAATTCTCTGTTAGTTTaGGCTAACGTGTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: PERPWSCTKNVQHQQDKTNSLLV*ANVSFS
Trigger: ACTGAATGACACGTTAGCCAAAACTAACAGAGAATT...TGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp CAGAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGAATTCTCTGTTAGTTTaGGCTAACGTGTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: QKDHGVAQRMFSTSKIKQNSLLV*ANVSFS
Trigger: ACTGAATGACACGTTAGCCAAAACTAACAGAGAATT...CTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TTCTTTCCTCTTGGCCATATGTTCAGGTCTCATAGTCTTTCTGAACACAGAATGTACCTTAATGCATTCTaGTATTGTGTCGAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FFPLGHMFRSHSLSEHRMYLNAF*YCVELL
Trigger: AAGGAGCTCGACACAATACAAGAATGCATTAAGGTA...CATTCTGTGTTCAGAAAGACTATGAGACCTGAACATATGGCCAAGAGGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTTCTCGTAACACCTTaGCATACTCTTCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDFLVTP*HTLQFF
Trigger: GAAGAACTGAAGAGTATGCAAAGGTGTTACGAGAAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATTTGATTCTCCAACAATaGATGCAGTTTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDLILQQ*MQFGHC
Trigger: ACAGTGACCAAACTGCATCAATTGTTGGAGAATCAA...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp GAAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATCTGATCCTTAATTTCTaGCTCAATGCTGAAATGCAG +
Preference number: 5 (lower is better)
Translates to: ERPWSCTKNVQHQQDKTDLILNF*LNAEMQ
Trigger: CTGCATTTCAGCATTGAGCAAGAAATTAAGGATCAG...ATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAGGTGTGTCCGATAAATaGCAATTACTTCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIGVSDK*QLLLGA
Trigger: AGCACCAAGAAGTAATTGCAATTTATCGGACACACC...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCTATCTATCAGCAGTaGACATATTGTTGGCCTACT +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISIYQQ*TYCWPT
Trigger: AGTAGGCCAACAATATGTCAACTGCTGATAGATAGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAACACATTTACTTCATCTaGCATGTGTGTCAAATTTCG +
Preference number: 5 (lower is better)
Translates to: FNYTSTVRPRKTMELHKEHIYFI*HVCQIS
Trigger: CGAAATTTGACACACATGCAAGATGAAGTAAATGTG...TTCTTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATCTAATGCTAAAGCTTaGCATTCTGCCACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKSNAKA*HSATLC
Trigger: ACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCTAATGCTAAAGCTTaGCATTCTGCCACTTTGTGT +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISNAKA*HSATLC
Trigger: ACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATATCATCTGAATCCTCCTaGACCCTTTCACATTCTAAT +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQISSESS*TLSHSN
Trigger: ATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGA...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AACTGTATTATGTCTCAAGGTTCTGAGGATCTGAAAGGTCTTTTGATCCACCTAATCTCAGAAGTCTGTTaGGCATTTTCTTCTACTAGC +
Preference number: 5 (lower is better)
Translates to: NCIMSQGSEDLKGLLIHLISEVC*AFSSTS
Trigger: GCTAGTAGAAGAAAATGCCAAACAGACTTCTGAGAT...TAGGTGGATCAAAAGACCTTTCAGATCCTCAGAACCTTGAGACATAATACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAATCTCAGAAGTCTGTTaGGCATTTTCTTCTACTAGC +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIISEVC*AFSSTS
Trigger: GCTAGTAGAAGAAAATGCCAAACAGACTTCTGAGAT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAATTTCTCGTAACACCTTaGCATACTCTTCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKFLVTP*HTLQFF
Trigger: GAAGAACTGAAGAGTATGCAAAGGTGTTACGAGAAA...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAAGAGACTTCTTCCATTTaGTTTTGGCTTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKETSSI*FWLSSS
Trigger: GGAAGAAGAAAGCCAAAACAAAATGGAAGAAGTCTC...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACTGATCCTTAATTTCTaGCTCAATGCTGAAATGCAG +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQILILNF*LNAEMQ
Trigger: CTGCATTTCAGCATTGAGCAAGAAATTAAGGATCAG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 90 bp GAGAATCCAAATTCATCAGTTTGGTTCTCAATGACTTCCACAGTTTaGCTTCAAACATTAACTTTCAAATACAGCAGTCCCCTCTTATTG +
Preference number: 5 (lower is better)
Translates to: ENPNSSVWFSMTSTV*LQTLTFKYSSPLLL
Trigger: CAATAAGAGGGGACTGCTGTATTTGAAAGTTAATGTTTGAAGCCAAACTGTGGAAGTCATTGAGAACCAAACTGATGAATTTGGATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACACATTTACTTCATCTaGCATGTGTGTCAAATTTCG +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIHIYFI*HVCQIS
Trigger: CGAAATTTGACACACATGCAAGATGAAGTAAATGTG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TATTTTAATTATACCAGCACAGTAAGGCCCAGAAAGACCATGGAGTTGCACAAACACAGAAAGTTCGCATaGCTTCTAACTCTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: YFNYTSTVRPRKTMELHKHRKFA*LLTLSL
Trigger: TAAAGAAAGAGTTAGAAGCAATGCGAACTTTCTGTG...TTTGTGCAACTCCATGGTCTTTCTGGGCCTTACTGTGCTGGTATAATTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATACACAGAAAGTTCGCATaGCTTCTAACTCTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQIHRKFA*LLTLSL
Trigger: TAAAGAAAGAGTTAGAAGCAATGCGAACTTTCTGTG...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp AAAGACCATGGAGTTGCACAAAGAATGTTCAGCACCAGCAAGATAAAACAGATAAATTCTCTGTTAGTTTaGGCTAACGTGTCATTCAGT +
Preference number: 5 (lower is better)
Translates to: KDHGVAQRMFSTSKIKQINSLLV*ANVSFS
Trigger: ACTGAATGACACGTTAGCCAAAACTAACAGAGAATT...TATCTGTTTTATCTTGCTGGTGCTGAACATTCTTTGTGCAACTCCATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS-3UTR CAA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAAGGTGTGTCCGATAAATaGCAATTACTTCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQGVSDK*QLLLGA
Trigger: AGCACCAAGAAGTAATTGCAATTTATCGGACACACC...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS TCA 90 bp TTAATGCATCTTCTAATTGCTTTATCTGTTCATCTGAATCCTCCTTaGCCCTTTCACATTCTAATGCTAAAGCTTTGCATTCTGCCACTT +
Preference number: 5 (lower is better)
Translates to: LMHLLIALSVHLNPP*PFHILMLKLCILPL
Trigger: AAGTGGCAGAATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAGCAATTAGAAGATGCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS TCA 90 bp TGTAACTCTGTGATTGTTGTTAAGGACTTATCACATCGTTCCTTCTaGTCCTTAATTTCTTGCTCAATGCTGAAATGCAGTAATTCCTTC +
Preference number: 5 (lower is better)
Translates to: CNSVIVVKDLSHRSF*SLISCSMLKCSNSF
Trigger: GAAGGAATTACTGCATTTCAGCATTGAGCAAGAAATTAAGGATCAGAAGGAACGATGTGATAAGTCCTTAACAACAATCACAGAGTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS GCA 90 bp GCGATCCTGCTACTTCTAACAACAAACTACCTTGGACCTACCAGATaGAGAATTTCAAAACGTAACAATATAAACTTCTGTAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: AILLLLTTNYLGPTR*RISKRNNINFCKEC
Trigger: ACATTCTTTACAGAAGTTTATATTGTTACGTTTTGAAATTCTGCATCTGGTAGGTCCAAGGTAGTTTGTTGTTAGAAGTAGCAGGATCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 90 bp TATCAGCGTTCACATTTCCAAACTTTGGACAATGCTCAGGCTTCATaGTACAAAACTATTATTATTATTAAGGCGATCCTGCTACTTCTA +
Preference number: 5 (lower is better)
Translates to: YQRSHFQTLDNAQAS*YKTIIIIKAILLLL
Trigger: TAGAAGTAGCAGGATCGCCTTAATAATAATAATAGTTTTGTAGCATGAAGCCTGAGCATTGTCCAAAGTTTGGAAATGTGAACGCTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS-3UTR CAA 90 bp TTAAAAAGCTTTGGTCTTCAGTGTTGTAAACGCAATTTCTGCCTTCGATATCAATTGATTCTCCAACAATaGATGCAGTTTGGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LKSFGLQCCKRNFCLRYQLILQQ*MQFGHC
Trigger: ACAGTGACCAAACTGCATCAATTGTTGGAGAATCAA...TTGATATCGAAGGCAGAAATTGCGTTTACAACACTGAAGACCAAAGCTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 72 bp CGGAGTGCCAGCGCGCAAGGAGTAGACGGCAGCGGCTaGAGCAGAGGCGGCGCGGGCTGTACCAGCCCCACC +
Preference number: 6 (lower is better)
Translates to: RSASAQGVDGSG*SRGGAGCTSPT
Trigger: GGTGGGGCTGGTACAGCCCGCGCCGCCTCTGCTGCAGCCGCTGCCGTCTACTCCTTGCGCGCTGGCACTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 72 bp GCGGCGGCGCCAGACGACGCGGGGCCGGGCACGTCCTaGCTCCTCAGGCGGGACTTGAGGCTCTTCATGGCT +
Preference number: 6 (lower is better)
Translates to: AAAPDDAGPGTS*LLRRDLRLFMA
Trigger: AGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAGGCAGGACGTGCCCGGCCCCGCGTCGTCTGGCGCCGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS CAA 90 bp CCAGACGACGCGGGGCCGGGCACGTCCTGCCTCCTCAGGCGGGACTaGAGGCTCTTCATGGCTAACTCTTGCCTGGCCCCCGCGCGAACC +
Preference number: 6 (lower is better)
Translates to: PDDAGPGTSCLLRRD*RLFMANSCLAPART
Trigger: GGTTCGCGCGGGGGCCAGGCAAGAGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAGGCAGGACGTGCCCGGCCCCGCGTCGTCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 72 bp TGCCTGGCCCCCGCGCGAACCTTAAAGGCTGCGGAGTaGCAGCGCGCAAGGAGTAGACGGCAGCGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: CLAPARTLKAAE*QRARSRRQRLQ
Trigger: CTGCAGCCGCTGCCGTCTACTCCTTGCGCGCTGGCACTCCGCAGCCTTTAAGGTTCGCGCGGGGGCCAGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS CAA 72 bp GCGGGGCCGGGCACGTCCTGCCTCCTCAGGCGGGACTaGAGGCTCTTCATGGCTAACTCTTGCCTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: AGPGTSCLLRRD*RLFMANSCLAP
Trigger: GGGGGCCAGGCAAGAGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAGGAGGCAGGACGTGCCCGGCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322954.11
ENST00000539319.5
CDS GCA 72 bp CTCAGGCGGGACTTGAGGCTCTTCATGGCTAACTCTTaGCTGGCCCCCGCGCGAACCTTAAAGGCTGCGGAG +
Preference number: 6 (lower is better)
Translates to: LRRDLRLFMANS*LAPARTLKAAE
Trigger: CTCCGCAGCCTTTAAGGTTCGCGCGGGGGCCAGGCAAGAGTTAGCCATGAAGAGCCTCAAGTCCCGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322954.11
CDS GCA 72 bp GCTAGAAGGACAATCTGCCATTGCGGCATCGTGAAGTaGAGTTCTTCCCTGCAGGTCTGCATGCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: ARRTICHCGIVK*SSSLQVCMLSG
Trigger: CCCACTGAGCATGCAGACCTGCAGGGAAGAACTGCACTTCACGATGCCGCAATGGCAGATTGTCCTTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560167.1
ENST00000560441.5
ENST00000560523.5
CDS GCA 72 bp TCGGCCAGCTGTTGCTCCAGAGATTTCACTTGGTGCTaGAGAGTGTCAATCAGCTGGCTCTGCCTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SASCCSRDFTWC*RVSISWLCLLV
Trigger: CACCAAGAGGCAGAGCCAGCTGATTGACACTCTGCAGCACCAAGTGAAATCTCTGGAGCAACAGCTGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS GCA 72 bp GCATCGGCCAGCTGTTGCTCCAGAGATTTCACTTGGTaGTGCAGAGTGTCAATCAGCTGGCTCTGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ASASCCSRDFTW*CRVSISWLCLL
Trigger: CAAGAGGCAGAGCCAGCTGATTGACACTCTGCAGCACCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS GCA 72 bp GACCCCACTGGAAAACTTGAACAGCACTCTGCATCCTaGTGCCTCAACACTGCAACACAGACGCTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: DPTGKLEQHSAS*CLNTATQTLQC
Trigger: GCACTGCAGCGTCTGTGTTGCAGTGTTGAGGCAGCAGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379983.6
ENST00000560441.5
CDS TCA 72 bp CTAACGGCTAGCACACAAGCCCCTGCCGCATTTGTATaGTCTGGAGCAGAGCCTCCTGAACATCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: LTASTQAPAAFV*SGAEPPEHLHP
Trigger: TGGATGAAGATGTTCAGGAGGCTCTGCTCCAGATCATACAAATGCGGCAGGGGCTTGTGTGCTAGCCGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000559206.1
ENST00000560441.5
ENST00000560831.1
CDS CCA 72 bp CAGGCATCCACTGGGGATCTTGGAACATACCCTCAGTaGATAAGAGAGGGACTACTCTACAGGCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: QASTGDLGTYPQ*IREGLLYRQGF
Trigger: AAAGCCCTGCCTGTAGAGTAGTCCCTCTCTTATCCACTGAGGGTATGTTCCAAGATCCCCAGTGGATGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS TCA 72 bp ATTTCAGCATTACTATCCTGCACCTTTCTCATGCTCTaGCTTAGCGAGCTCATCTTTGCCTCGTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: ISALLSCTFLML*LSELIFASCSA
Trigger: GGCAGAGCACGAGGCAAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGGATAGTAATGCTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS GCA 72 bp ACCCTGTGCAGCACTAAGAAGGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTGTCTGTCAGCATCGGC +
Preference number: 6 (lower is better)
Translates to: TLCSTKKVCPIN*NYFLVLSVSIG
Trigger: GCCGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS CCA 72 bp TATTGTTGGCCTACTCATCTGAGTAGCCAGAACAAGTaGTGTCCGCCCGTCTACATCTTTGGCATTCACAGA +
Preference number: 6 (lower is better)
Translates to: YCWPTHLSSQNK*CPPVYIFGIHR
Trigger: TCTGTGAATGCCAAAGATGTAGACGGGCGGACACCACTTGTTCTGGCTACTCAGATGAGTAGGCCAACAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000558758.5
ENST00000560167.1
ENST00000560441.5
ENST00000560523.5
CDS CCA 72 bp ATTCAGCAGGTCCTATCCATGGTTTCAGGCATCCACTaGGGATCTTGGAACATACCCTCAGTGGATAAGAGA +
Preference number: 6 (lower is better)
Translates to: IQQVLSMVSGIH*GSWNIPSVDKR
Trigger: TCTCTTATCCACTGAGGGTATGTTCCAAGATCCCCAGTGGATGCCTGAAACCATGGATAGGACCTGCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 72 bp CCAAGATTTCAGCATTACTATCCTGCACCTTTCTCATaGTCTGACTTAGCGAGCTCATCTTTGCCTCGTGCT +
Preference number: 6 (lower is better)
Translates to: PRFQHYYPAPFS*SDLASSSLPRA
Trigger: AGCACGAGGCAAAGATGAGCTCGCTAAGTCAGAGCATGAGAAAGGTGCAGGATAGTAATGCTGAAATCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 72 bp GAAGTGCAGTTCTTCCCTGCAGGTCTGCATGCTCAGTaGGACAATTGTACTGTAGAAGTTTTTGTAGGCACA +
Preference number: 6 (lower is better)
Translates to: EVQFFPAGLHAQ*DNCTVEVFVGT
Trigger: TGTGCCTACAAAAACTTCTACAGTACAATTGTCCCACTGAGCATGCAGACCTGCAGGGAAGAACTGCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560167.1
ENST00000560441.5
ENST00000560523.5
CDS CAA 72 bp ACTAAGAAGGTGTGTCCGATAAATTGCAATTACTTCTaGGTGCTGTCTGTCAGCATCGGCCAGCTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: TKKVCPINCNYF*VLSVSIGQLLL
Trigger: GAGCAACAGCTGGCCGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
ENST00000560831.1
CDS TCA 72 bp CTCTTAACCTGTTCATGTTCCTCTGGTTTGACGTGCTaGGCAAGCTTGGCCTTAACATTCTCAAGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: LLTCSCSSGLTC*ASLALTFSSSL
Trigger: GAGAGAACTTGAGAATGTTAAGGCCAAGCTTGCTCAGCACGTCAAACCAGAGGAACATGAACAGGTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS TCA 72 bp TTAGCGAGCTCATCTTTGCCTCGTGCTCTGCCAGGCTaGTGTACTCAGCTTTTATTTGGTTCTGAGTGTTTT +
Preference number: 6 (lower is better)
Translates to: LASSSLPRALPG*CTQLLFGSECF
Trigger: AAAACACTCAGAACCAAATAAAAGCTGAGTACATCAGCCTGGCAGAGCACGAGGCAAAGATGAGCTCGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS GCA 72 bp ACCCTGTGCAGCACTAAGAAGGTGTGTCCGATAAATTaGAATTACTTCTTGGTGCTGTCTGTCAGCATCCTA +
Preference number: 6 (lower is better)
Translates to: TLCSTKKVCPIN*NYFLVLSVSIL
Trigger: TAGGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS CAA 72 bp ACAACATGGAAGACAGATCTGCCTTCCACATCTAGTTaGCCTGGATTGACCCCCTTTTTAGCAAGGATTGAG +
Preference number: 6 (lower is better)
Translates to: TTWKTDLPSTSS*PGLTPFLARIE
Trigger: CTCAATCCTTGCTAAAAAGGGGGTCAATCCAGGCAAACTAGATGTGGAAGGCAGATCTGTCTTCCATGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560167.1
ENST00000560441.5
ENST00000560523.5
CDS CAA 90 bp TTTGAGGTCACAACATGGAAGACAGATCTGCCTTCCACATCTAGTTaGCCTGGATTGACCCCCTTTTTAGCAAGGATTGAGGTCACTTTT +
Preference number: 6 (lower is better)
Translates to: FEVTTWKTDLPSTSS*PGLTPFLARIEVTF
Trigger: AAAAGTGACCTCAATCCTTGCTAAAAAGGGGGTCAATCCAGGCAAACTAGATGTGGAAGGCAGATCTGTCTTCCATGTTGTGACCTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560167.1
ENST00000560441.5
ENST00000560523.5
CDS CAA 90 bp CTGTGCAGCACTAAGAAGGTGTGTCCGATAAATTGCAATTACTTCTaGGTGCTGTCTGTCAGCATCCTAGAAATGTGGAAAGATGGACAG +
Preference number: 6 (lower is better)
Translates to: LCSTKKVCPINCNYF*VLSVSILEMWKDGQ
Trigger: CTGTCCATCTTTCCACATTTCTAGGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 72 bp TGCTTTCATCAATCGGTCATCATATTTATTCCAATCTaGTGCATGCAAGGCCGGTGCAAATTCAGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: CFHQSVIIFIPI*CMQGRCKFRVV
Trigger: AACCACCCTGAATTTGCACCGGCCTTGCATGCAGCAGATTGGAATAAATATGATGACCGATTGATGAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560167.1
CDS CAA 90 bp CTTCTTCTGGGCTTTAATTTCGGCATGCAGTGTCACAATCTCTTCTaGGCCTTTTCTGTAGTTGGCCAAGATTTCAGCATTACTATCCTG +
Preference number: 6 (lower is better)
Translates to: LLLGFNFGMQCHNLF*AFSVVGQDFSITIL
Trigger: CAGGATAGTAATGCTGAAATCTTGGCCAACTACAGAAAAGGCCAAGAAGAGATTGTGACACTGCATGCCGAAATTAAAGCCCAGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CAA 90 bp CTCCTCAAAGCTGACAATTGGGGCGTATTTTACCTTAATGCATTCTaGTATTGTGTCGAGCTCCTTCTTCTGGGCTTTAATTTCGGCATG +
Preference number: 6 (lower is better)
Translates to: LLKADNWGVFYLNAF*YCVELLLLGFNFGM
Trigger: CATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGACACAATACAAGAATGCATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CAA 90 bp TTCTTTAATCTGCAAATGCTCTGCCAGGGGTACAGAAGAGTTCTTTaGATTCTCCAACAATTGATGCAGTTTGGTCACTGTCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: FFNLQMLCQGYRRVL*ILQQLMQFGHCLLL
Trigger: GAGCAGCAGACAGTGACCAAACTGCATCAATTGTTGGAGAATCAAAAGAACTCTTCTGTACCCCTGGCAGAGCATTTGCAGATTAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS TCA 72 bp AAATACAGCAGTCCCCTCTTATTGGCAGTTTTGCGATaGGCAGTTTCACTTTCTCTATTTCTGTTGCCCATG +
Preference number: 6 (lower is better)
Translates to: KYSSPLLLAVLR*AVSLSLFLLPM
Trigger: CATGGGCAACAGAAATAGAGAAAGTGAAACTGCTCATCGCAAAACTGCCAATAAGAGGGGACTGCTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 72 bp AAAGATAGTTCCAGAGGTCTTAACATAGATCTGCTTTaGATATGGGCTGGTATACCTGGGGAAGTACACTGT +
Preference number: 6 (lower is better)
Translates to: KDSSRGLNIDLL*IWAGIPGEVHC
Trigger: ACAGTGTACTTCCCCAGGTATACCAGCCCATATGCAAAGCAGATCTATGTTAAGACCTCTGGAACTATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS CAA 72 bp TCCTCCTTGACCCTTTCACATTCTAATGCTAAAGCTTaGCATTCTGCCACTTTGTGTGCCAGTTCATTTTGG +
Preference number: 6 (lower is better)
Translates to: SSLTLSHSNAKA*HSATLCASSFW
Trigger: CCAAAATGAACTGGCACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS CAA 72 bp AATCTGTATTTTGCCTCTCTAACTACCCAGAACTCCTaGGGGACAGGAATGGCATACTTTCTTTATCCCACT +
Preference number: 6 (lower is better)
Translates to: NLYFASLTTQNS*GTGMAYFLYPT
Trigger: AGTGGGATAAAGAAAGTATGCCATTCCTGTCCCCAAGGAGTTCTGGGTAGTTAGAGAGGCAAAATACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS CAA 72 bp GACAATCACCCCAGTTTTGCCAAAGAGGCAACAAGTTaGAAGACTTTAAATAAGCAGCCCAAGGTCACACTA +
Preference number: 6 (lower is better)
Translates to: DNHPSFAKEATS*KTLNKQPKVTL
Trigger: TAGTGTGACCTTGGGCTGCTTATTTAAAGTCTTCAAACTTGTTGCCTCTTTGGCAAAACTGGGGTGATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559156.5
CDS CAA 90 bp TCATCTGAATCCTCCTTGACCCTTTCACATTCTAATGCTAAAGCTTaGCATTCTGCCACTTTGTGTGCCAGTTCATTTTGGAGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: SSESSLTLSHSNAKA*HSATLCASSFWSFS
Trigger: ACTGAAGCTCCAAAATGAACTGGCACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS TCA 72 bp CCTGGGGAAGTACACTGTGAGTCTGCCATATACATCTaGCCTTGTTTAAGAAGCATATCTTCTTTTCGGTTA +
Preference number: 6 (lower is better)
Translates to: PGEVHCESAIYI*PCLRSISSFRL
Trigger: TAACCGAAAAGAAGATATGCTTCTTAAACAAGGTCAGATGTATATGGCAGACTCACAGTGTACTTCCCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
CDS GCA 72 bp TTTCATCAATCGGTCATCATATTTATTCCAATCTGCTaGATGCAAGGCCGGTGCAAATTCAGGGTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: FHQSVIIFIPIC*MQGRCKFRVVF
Trigger: AAAAACCACCCTGAATTTGCACCGGCCTTGCATGCAGCAGATTGGAATAAATATGATGACCGATTGATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560167.1
CDS CCA 72 bp TTAATGCATTCTTGTATTGTGTCGAGCTCCTTCTTCTaGGCTTTAATTTCGGCATGCAGTGTCACAATCTCT +
Preference number: 6 (lower is better)
Translates to: LMHSCIVSSSFF*ALISACSVTIS
Trigger: AGAGATTGTGACACTGCATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGACACAATACAAGAATGCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 72 bp AAACTAGCTTCTACCACACCACTAATCTTTCCTTCCTaGAAACCCCTATCACTTAGAATCTGCATTCTCAGT +
Preference number: 6 (lower is better)
Translates to: KLASTTPLIFPS*KPLSLRICILS
Trigger: ACTGAGAATGCAGATTCTAAGTGATAGGGGTTTCCAGGAAGGAAAGATTAGTGGTGTGGTAGAAGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS CAA 72 bp GCTGACAATTGGGGCGTATTTTACCTTAATGCATTCTaGTATTGTGTCGAGCTCCTTCTTCTGGGCTTTAAT +
Preference number: 6 (lower is better)
Translates to: ADNWGVFYLNAF*YCVELLLLGFN
Trigger: ATTAAAGCCCAGAAGAAGGAGCTCGACACAATACAAGAATGCATTAAGGTAAAATACGCCCCAATTGTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS TCA 72 bp CCTGGGGAAGTACACTGTGAGTCTGCCATATACATCTaGCCTTGTTTAAGAAGCATATCTTCTTTTCCTAAA +
Preference number: 6 (lower is better)
Translates to: PGEVHCESAIYI*PCLRSISSFPK
Trigger: TTTAGGAAAAGAAGATATGCTTCTTAAACAAGGTCAGATGTATATGGCAGACTCACAGTGTACTTCCCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559290.1
CDS CAA 72 bp ACTAAGAAGGTGTGTCCGATAAATTGCAATTACTTCTaGGTGCTGTCTGTCAGCATCCTAGAAATGTGGAAA +
Preference number: 6 (lower is better)
Translates to: TKKVCPINCNYF*VLSVSILEMWK
Trigger: TTTCCACATTTCTAGGATGCTGACAGACAGCACCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 72 bp ATCTTTCCTTCCTGGAAACCCCTATCACTTAGAATCTaGATTCTCAGTTCTACATTTGACATCTCTCATCTT +
Preference number: 6 (lower is better)
Translates to: IFPSWKPLSLRI*ILSSTFDISHL
Trigger: AAGATGAGAGATGTCAAATGTAGAACTGAGAATGCAGATTCTAAGTGATAGGGGTTTCCAGGAAGGAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS GCA 72 bp AGAGGTACAAAAATGACACAGGATGATGATCAGAATTaGTCAAGGTACCTGATTACTTTCTCTTCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: RGTKMTQDDDQN*SRYLITFSSGF
Trigger: AAACCCTGAAGAGAAAGTAATCAGGTACCTTGAGCAATTCTGATCATCATCCTGTGTCATTTTTGTACCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559183.1
CDS CAA 90 bp TTGCCTTCATCCCTCTTAAACTCTTCTACTATCATCTCATTTTGTTaGATTTGGTTTCTTAATTTCCCCACTTCTGCTGAAGCACCTTCA +
Preference number: 6 (lower is better)
Translates to: LPSSLLNSSTIISFC*IWFLNFPTSAEAPS
Trigger: TGAAGGTGCTTCAGCAGAAGTGGGGAAATTAAGAAACCAAATCAAACAAAATGAGATGATAGTAGAAGAGTTTAAGAGGGATGAAGGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000560441.5
CDS TCA 72 bp TGCTTAATGCTCTTTCCATTTCATGAGACTTCTCAATaGGAACTGTCTTATCTCTCAAATCTTTCTGAAGGG +
Preference number: 6 (lower is better)
Translates to: CLMLFPFHETSQ*ELSYLSNLSEG
Trigger: CCCTTCAGAAAGATTTGAGAGATAAGACAGTTCTCATTGAGAAGTCTCATGAAATGGAAAGAGCATTAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS TCA 72 bp GTGATTGTTGTTAAGGACTTATCACATCGTTCCTTCTaGTCCTTAATTTCTTGCTCAATGCTGAAATGCAGT +
Preference number: 6 (lower is better)
Translates to: VIVVKDLSHRSF*SLISCSMLKCS
Trigger: ACTGCATTTCAGCATTGAGCAAGAAATTAAGGATCAGAAGGAACGATGTGATAAGTCCTTAACAACAATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 72 bp AATTCATCAGTTTGGTTCTCAATGACTTCCACAGTTTaGCTTCAAACATTAACTTTCAAATACAGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: NSSVWFSMTSTV*LQTLTFKYSSP
Trigger: GGGACTGCTGTATTTGAAAGTTAATGTTTGAAGCCAAACTGTGGAAGTCATTGAGAACCAAACTGATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS CAA 72 bp CATTTACTTCATCTTGCATGTGTGTCAAATTTCGCTTaGGTAAAACATAAGAAAACACGGGTCAGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: HLLHLACVSNFA*VKHKKTRVSKC
Trigger: ACACTTGCTGACCCGTGTTTTCTTATGTTTTACCAAAGCGAAATTTGACACACATGCAAGATGAAGTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560951.1
CDS CAA 90 bp TTTAATGCATCTTCTAATTGCTTTATCTGTTCATCTGAATCCTCCTaGACCCTTTCACATTCTAATGCTAAAGCTTTGCATTCTGCCACT +
Preference number: 6 (lower is better)
Translates to: FNASSNCFICSSESS*TLSHSNAKALHSAT
Trigger: AGTGGCAGAATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAGCAATTAGAAGATGCATTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS CAA 90 bp GTGACTTCACATTTACTTCATCTTGCATGTGTGTCAAATTTCGCTTaGGTAAAACATAAGAAAACACGGGTCAGCAAGTGTAAGAATACA +
Preference number: 6 (lower is better)
Translates to: VTSHLLHLACVSNFA*VKHKKTRVSKCKNT
Trigger: TGTATTCTTACACTTGCTGACCCGTGTTTTCTTATGTTTTACCAAAGCGAAATTTGACACACATGCAAGATGAAGTAAATGTGAAGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560951.1
CDS CAA 90 bp CACATACTAAGTTCCTTCTGTAATCGCTTATTTTCTTCTATCAGCTaGCCTTCATCCCTCTTAAACTCTTCTACTATCATCTCATTTTGT +
Preference number: 6 (lower is better)
Translates to: HILSSFCNRLFSSIS*PSSLLNSSTIISFC
Trigger: ACAAAATGAGATGATAGTAGAAGAGTTTAAGAGGGATGAAGGCAAGCTGATAGAAGAAAATAAGCGATTACAGAAGGAACTTAGTATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS TCA 72 bp CTTCTAATTGCTTTATCTGTTCATCTGAATCCTCCTTaGCCCTTTCACATTCTAATGCTAAAGCTTTGCATT +
Preference number: 6 (lower is better)
Translates to: LLIALSVHLNPP*PFHILMLKLCI
Trigger: AATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAGCAATTAGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS GCA 72 bp CTTGTTAAGTGTTCTTTAAGGGCAAGAAAATGGGTCTaGATTTGTTTAACTTTACCTTCTGACTCATACATC +
Preference number: 6 (lower is better)
Translates to: LVKCSLRARKWV*ICLTLPSDSYI
Trigger: GATGTATGAGTCAGAAGGTAAAGTTAAACAAATGCAGACCCATTTTCTTGCCCTTAAAGAACACTTAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS CCA 72 bp TTTAAATTTTCTCTCGCACTCCTCAAAGCTGACAATTaGGGCGTATTTTACCTTAATGCATTCTTGTATTGT +
Preference number: 6 (lower is better)
Translates to: FKFSLALLKADN*GVFYLNAFLYC
Trigger: ACAATACAAGAATGCATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCGAGAGAAAATTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5
CDS CCA 72 bp GAAATAGGGAAACATCAGCAACAATTTACATGTGACTaGGCCGTTTTACTTAGCATTTCAATGTGTATTAGT +
Preference number: 6 (lower is better)
Translates to: EIGKHQQQFTCD*AVLLSISMCIS
Trigger: ACTAATACACATTGAAATGCTAAGTAAAACGGCCCAGTCACATGTAAATTGTTGCTGATGTTTCCCTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559206.1
CDS CAA 72 bp TCTTCTAATTGCTTTATCTGTTCATCTGAATCCTCCTaGACCCTTTCACATTCTAATGCTAAAGCTTTGCAT +
Preference number: 6 (lower is better)
Translates to: SSNCFICSSESS*TLSHSNAKALH
Trigger: ATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGAACAGATAAAGCAATTAGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000558758.5
ENST00000559290.1
ENST00000560441.5
CDS CCA 72 bp ATTCAGTGTCATTTTAACCTCTTCATGGGTTTTAACTaGCACATACTGATTACTCATCATCTTCTTCAAGTT +
Preference number: 6 (lower is better)
Translates to: IQCHFNLFMGFN*HILITHHLLQV
Trigger: AACTTGAAGAAGATGATGAGTAATCAGTATGTGCCAGTTAAAACCCATGAAGAGGTTAAAATGACACTGAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322954.11
ENST00000379983.6
ENST00000539319.5
ENST00000560441.5