Pregenerated sensors for U8 (Homo sapiens)
Ensembl gene IDs: ENSG00000199713, ENSG00000200026, ENSG00000200191, ENSG00000201810, ENSG00000202269, ENSG00000202537, ENSG00000206987, ENSG00000207430, ENSG00000207432, ENSG00000212145, ENSG00000212249, ENSG00000212581, ENSG00000239142, ENSG00000276367Ensembl transcript IDs: ENST00000362843.1, ENST00000363156.1, ENST00000363321.1, ENST00000364940.1, ENST00000365399.1, ENST00000365667.1, ENST00000384260.1, ENST00000384699.1, ENST00000384701.1, ENST00000390843.2, ENST00000390947.2, ENST00000391279.1, ENST00000459285.1, ENST00000459536.1, ENST00000610613.1, ENST00000616059.1, ENST00000622240.1, ENST00000631377.1, ENST00000632494.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAAAGGAGCAGTCAGGGTATTGCATGCCATCATTACACAGAGATATaGATCAAGTATCATGCAACTCCAACTACCACATTCTGCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ERSSQGIACHHYTEI*IKYHATPTTTFCCP Trigger: AGGGCAGCAGAATGTGGTAGTTGGAGTTGCATGATACTTGATTCATATCTCTGTGTAATGATGGCATGCAATACCCTGACTGCTCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000384699.1 ENST00000459285.1 ENST00000616059.1 ENST00000632494.1 |
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| CDS TCA 90 bp | GAAAGGAGCAGTCAGGGTATTGCATGCCATCATTACACAGAGATATaGATCAAGTATCATGCAACTCCAACTACCACATTCTACTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ERSSQGIACHHYTEI*IKYHATPTTTFYCP Trigger: AGGGCAGTAGAATGTGGTAGTTGGAGTTGCATGATACTTGATTCATATCTCTGTGTAATGATGGCATGCAATACCCTGACTGCTCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000610613.1 ENST00000622240.1 |
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| CDS GCA 90 bp | GGGTATTGCATGCCATCATTACACAGAGATATCAATCAAGTATCATaGAACTCCAACTACCACATTCTACTGCCCTCCAAAAGGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: GYCMPSLHRDINQVS*NSNYHILLPSKRRN Trigger: GTTCCTCCTTTTGGAGGGCAGTAGAATGTGGTAGTTGGAGTTGCATGATACTTGATTGATATCTCTGTGTAATGATGGCATGCAATACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000384260.1 |
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| CDS TCA 90 bp | ACAGAGTTATTAATCACGTTTCATTCTTCTCCAATCATCATGTTCTaGTCTGCCCTCCAAAAGGAGAAACAGGTAAGGATGATCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: TELLITFHSSPIIMF*SALQKEKQVRMIPP Trigger: AGGTGGGATCATCCTTACCTGTTTCTCCTTTTGGAGGGCAGATCAGAACATGATGATTGGAGAAGAATGAAACGTGATTAATAACTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000365399.1 |
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| CDS GCA 90 bp | AGAGAATTAATCACATATCATGTAAACTCTAGTCATCGTGAACTCTaGCCTCCAAAAGAAGGAACAGGTAAGGATGATCTCACCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: RELITYHVNSSHREL*PPKEGTGKDDLTCG Trigger: TCCACAGGTGAGATCATCCTTACCTGTTCCTTCTTTTGGAGGGCAGAGTTCACGATGACTAGAGTTTACATGATATGTGATTAATTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000363321.1 |
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| CDS GCA 72 bp | ATCAAGTATCATGCAATTCCAACTACCACATTCTGCTaGCCTCCAAAAGGAGGCACAGGTAAGGATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: IKYHAIPTTTFC*PPKGGTGKDYP Trigger: GGGATAATCCTTACCTGTGCCTCCTTTTGGAGGGCAGCAGAATGTGGTAGTTGGAATTGCATGATACTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000384701.1 ENST00000631377.1 |
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| CDS GCA 72 bp | ATCAAGTATCATGCAACTCCAACTACCACATTCTACTaGCCTCCAAAAGGAGGCACAGGTAAGGATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: IKYHATPTTTFY*PPKGGTGKDYP Trigger: GGGATAATCCTTACCTGTGCCTCCTTTTGGAGGGCAGTAGAATGTGGTAGTTGGAGTTGCATGATACTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000610613.1 ENST00000622240.1 |
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| CDS GCA 72 bp | CACGTTTCATTCTTCTCCAATCATCATGTTCTGATCTaGCCTCCAAAAGGAGAAACAGGTAAGGATGATCCC | + |
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Preference number: 6 (lower is better) Translates to: HVSFFSNHHVLI*PPKGETGKDDP Trigger: GGGATCATCCTTACCTGTTTCTCCTTTTGGAGGGCAGATCAGAACATGATGATTGGAGAAGAATGAAACGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000365399.1 |
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| CDS GCA 72 bp | CCACATTTCATGCATCTCCAATCAGCCTATTCTTCCTaGCCTCCAAAAGGAGAAACAGGTAAGAATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: PHFMHLQSAYSS*PPKGETGKNYP Trigger: GGGATAATTCTTACCTGTTTCTCCTTTTGGAGGGCAGGAAGAATAGGCTGATTGGAGATGCATGAAATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000365667.1 |
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| CDS GCA 72 bp | CATGGATCATGCAAACTCCAATTATCCTGTTCTATCTaGCCTCCAAAACGAGGAACAGGTAAGGATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: HGSCKLQLSCSI*PPKRGTGKDYP Trigger: GGGATAATCCTTACCTGTTCCTCGTTTTGGAGGGCAGATAGAACAGGATAATTGGAGTTTGCATGATCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362843.1 |
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| CDS GCA 72 bp | ATCAAGTATCATGCAACTCCAACTACCACATTCTACTaGCCTCCAAAAGGAGGAACAGGTAAGGATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: IKYHATPTTTFY*PPKGGTGKDYP Trigger: GGGATAATCCTTACCTGTTCCTCCTTTTGGAGGGCAGTAGAATGTGGTAGTTGGAGTTGCATGATACTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000384260.1 |
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| CDS GCA 72 bp | TCACATTTCATGCATCTCCAATCATCATGTTCTATCTaGCCTCCAAAACGAGGAACAGGTAAGGATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: SHFMHLQSSCSI*PPKRGTGKDYP Trigger: GGGATAATCCTTACCTGTTCCTCGTTTTGGAGGGCAGATAGAACATGATGATTGGAGATGCATGAAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000363156.1 |
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| CDS GCA 72 bp | TTTCATGCATCTCCAATTATCATGTTCTATCTGCCCTaGAAAGGAGAAACAGGTAAGGGTTATCCCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: FHASPIIMFYLP*KGETGKGYPST Trigger: AGTGCTGGGATAACCCTTACCTGTTTCTCCTTTGCAGGGCAGATAGAACATGATAATTGGAGATGCATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390947.2 |
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| CDS GCA 72 bp | ATCACATATCATGTAAACTCTAGTCATCGTGAACTCTaGCCTCCAAAAGAAGGAACAGGTAAGGATGATCTC | + |
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Preference number: 6 (lower is better) Translates to: ITYHVNSSHREL*PPKEGTGKDDL Trigger: GAGATCATCCTTACCTGTTCCTTCTTTTGGAGGGCAGAGTTCACGATGACTAGAGTTTACATGATATGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000363321.1 |
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| CDS GCA 72 bp | ATCAAGTATTATGCCACTCCAATTACCACATTCTACTaGCCTCCAAAAGGAGGAACAGATAGGGATTATCCT | + |
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Preference number: 6 (lower is better) Translates to: IKYYATPITTFY*PPKGGTDRDYP Trigger: AGGATAATCCCTATCTGTTCCTCCTTTTGGAGGGCAGTAGAATGTGGTAATTGGAGTGGCATAATACTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390843.2 |
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| CDS GCA 72 bp | ATCGCATACTATGTGAACCCCAATCATGTCCTAATTTaGCCTCCAAAAGAAGGAACAGGTAAAGATTATCCC | + |
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Preference number: 6 (lower is better) Translates to: IAYYVNPNHVLI*PPKEGTGKDYP Trigger: GGGATAATCTTTACCTGTTCCTTCTTTTGGAGGGCAAATTAGGACATGATTGGGGTTCACATAGTATGCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391279.1 |
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| CDS TCA 72 bp | TTAATCACGTTTCATTCTTCTCCAATCATCATGTTCTaGTCTGCCCTCCAAAAGGAGAAACAGGTAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LITFHSSPIIMF*SALQKEKQVRM Trigger: CATCCTTACCTGTTTCTCCTTTTGGAGGGCAGATCAGAACATGATGATTGGAGAAGAATGAAACGTGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000365399.1 |
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| CDS GCA 72 bp | ATGTATTGTGCAAACTACATTCATCATGTTCTAATCTaGCCTCCAAAGGAAGGAACAAGTGAAAACTATCCC | + |
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Preference number: 6 (lower is better) Translates to: MYCANYIHHVLI*PPKEGTSENYP Trigger: GGGATAGTTTTCACTTGTTCCTTCCTTTGGAGGGCAGATTAGAACATGATGAATGTAGTTTGCACAATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459536.1 |
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| CDS GCA 72 bp | ATGTATCATGTGAACTCCAATTATCATGTTCTAATCTaGCCTTCAAAAGGAGAAACAGATAAGGATTATTCC | + |
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Preference number: 6 (lower is better) Translates to: MYHVNSNYHVLI*PSKGETDKDYS Trigger: GGAATAATCCTTATCTGTTTCTCCTTTTGAAGGGCAGATTAGAACATGATAATTGGAGTTCACATGATACAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364940.1 |
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