RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for U2SURP (Homo sapiens)

Ensembl gene IDs: ENSG00000163714

Ensembl transcript IDs: ENST00000461591.5, ENST00000461844.1, ENST00000463563.6, ENST00000467348.1, ENST00000470400.5, ENST00000473835.7, ENST00000480029.5, ENST00000485374.5, ENST00000488497.7, ENST00000488587.1, ENST00000493598.6, ENST00000493782.5, ENST00000600150.5

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAAGCTACTGTAGGTGTGCACCGTTTGGAAATAGTGTATCTCACTaGTCAGCTAATATAGGAACTCTCCAAACCATGGGTGCACATCTT +
Preference number: 1 (lower is better)
Translates to: QSYCRCAPFGNSVSH*SANIGTLQTMGAHL
Trigger: AAGATGTGCACCCATGGTTTGGAGAGTTCCTATATTAGCTGAGCAGTGAGATACACTATTTCCAAACGGTGCACACCTACAGTAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR CCA 90 bp AAGAGCCTAAGTCATGCCCTTTATAAGAACTGTGGAAAACAACTCTaGCACGTAGCTGTGGTAGAGGACAGTAAGTGTCCACAGATAGAA +
Preference number: 1 (lower is better)
Translates to: KSLSHALYKNCGKQL*HVAVVEDSKCPQIE
Trigger: TTCTATCTGTGGACACTTACTGTCCTCTACCACAGCTACGTGCCAGAGTTGTTTTCCACAGTTCTTATAAAGGGCATGACTTAGGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR GCA 90 bp AGTGCTCCCTTTTTACTAGGTTCCTCTACAAAAGCTTCTGTTTCTTaGTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: SAPFLLGSSTKASVS*SSDIPCKYGFNGGG
Trigger: GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGAGGAACCTAGTAAAAAGGGAGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR GCA 90 bp GGTTCCTCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATaGAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTT +
Preference number: 1 (lower is better)
Translates to: GSSTKASVSCSSDIP*KYGFNGGGLQKDPF
Trigger: AAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGAGGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR TCA 90 bp AATCCATTTACATTGAAGCTCCATGAGGTGGTACTGAATAAACACTaGGGCATCAAATTTTCAACAATGGAACAAGGCTCACGGAACAGC +
Preference number: 1 (lower is better)
Translates to: NPFTLKLHEVVLNKH*GIKFSTMEQGSRNS
Trigger: GCTGTTCCGTGAGCCTTGTTCCATTGTTGAAAATTTGATGCCTCAGTGTTTATTCAGTACCACCTCATGGAGCTTCAATGTAAATGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR TCA 90 bp AGAGAAATAAGCATCCCTTGCAACTTGACTGGAAAGATTATTACCTaGCCAATTATTTCTAAGCCTATACTAGAAACCAGTGCAAGATGG +
Preference number: 1 (lower is better)
Translates to: REISIPCNLTGKIIT*PIISKPILETSARW
Trigger: CCATCTTGCACTGGTTTCTAGTATAGGCTTAGAAATAATTGGTCAGGTAATAATCTTTCCAGTCAAGTTGCAAGGGATGCTTATTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR GCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCATCACTCGTCTACCACTaGTACTGCGAGATGGGCTGG +
Preference number: 2 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPSLVYH*YCEMGW
Trigger: CCAGCCCATCTCGCAGTAGCAGTGGTAGACGAGTGA...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR-3UTR TCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAAATCTTCCCATGCTCTaGAGCAAGTCATTACCCGTT +
Preference number: 2 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPNLPML*SKSLPV
Trigger: AACGGGTAATGACTTGCTTCAGAGCATGGGAAGATT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR-3UTR CCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCCAAGCTCTTCCTCGATaGGGGCACCATCAAGGTCAT +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPQALPR*GHHQGH
Trigger: ATGACCTTGATGGTGCCCCCATCGAGGAAGAGCTTG...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR TCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCCATTCTCCCAGGCAATaGGCAGGGGAGAAAAACATG +
Preference number: 2 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPHSPRQ*AGEKNM
Trigger: CATGTTTTTCTCCCCTGCTCATTGCCTGGGAGAATG...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR TCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTTGTTTCTTGCTCTTCTaGCATTCCATGCAAGTACGG +
Preference number: 2 (lower is better)
Translates to: SSHALKQVITRCLKFSDCCFLLF*HSMQVR
Trigger: CCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACA...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR-3UTR TCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCAGATGCAGTTGCTCATaGGTTTACACATGCATACAC +
Preference number: 2 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSRCSCS*VYTCIH
Trigger: GTGTATGCATGTGTAAACTCATGAGCAACTGCATCT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
3UTR-3UTR TCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTTGTTTCTTGCTCTTCTaGCATTCCATGCAAGTACGG +
Preference number: 2 (lower is better)
Translates to: TIASPISFFLGVNPRKISCFLLF*HSMQVR
Trigger: CCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACA...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR-3UTR GCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCCAGTGCAAGATGGAATaGCAAAATCACCACCAACTC +
Preference number: 2 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIQCKME*QNHHQL
Trigger: GAGTTGGTGGTGATTTTGGCATTCCATCTTGCACTG...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACTTTGTGAGATGACCTaGACCGTGAGCTCTCTTTAT +
Preference number: 2 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKLCEMT*TVSSLY
Trigger: ATAAAGAGAGCTCACGGTCCAGGTCATCTCACAAAG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR CCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCGAAACCAGTGCAAGATaGAATGCCAAAATCACCACC +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPETSAR*NAKITT
Trigger: GGTGGTGATTTTGGCATTCCATCTTGCACTGGTTTC...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTATGTGGAAAACAACTCTaGCACGTAGCTGTGGTAGAG +
Preference number: 2 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVCGKQL*HVAVVE
Trigger: CTCTACCACAGCTACGTGCCAGAGTTGTTTTCCACA...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAGATGCAGTTGCTCATaGGTTTACACATGCATACAC +
Preference number: 2 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKRCSCS*VYTCIH
Trigger: GTGTATGCATGTGTAAACTCATGAGCAACTGCATCT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
3UTR-3UTR TCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATAATCTTCCCATGCTCTaGAGCAAGTCATTACCCGTT +
Preference number: 2 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNNLPML*SKSLPV
Trigger: AACGGGTAATGACTTGCTTCAGAGCATGGGAAGATT...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCGCATCCCTTGCAACTTaGCTGGAAAGATTATTACCT +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPASLAT*LERLLP
Trigger: AGGTAATAATCTTTCCAGTCAAGTTGCAAGGGATGC...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAAAGCTTCTGTTTCTTaGTCTTCTGACATTCCATGC +
Preference number: 2 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKKASVS*SSDIPC
Trigger: GCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATCTCCAAACCATGGGTaGACATCTTATTTTGTGACT +
Preference number: 2 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKSPNHG*TSYFVT
Trigger: AGTCACAAAATAAGATGTGCACCCATGGTTTGGAGA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCCATAGCTTCAAACATTaGCCCTTCACGTACAACAAA +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPHSFKH*PFTYNK
Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR CCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATACATGGGCTGGTGTCTaGTTTTCAAATAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNTWAGV*FSNKNL
Trigger: CAGGTTCTTATTTGAAAACCAGACACCAGCCCATGT...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGAACTCTCCAAACCATaGGTGCACATCTTATTTTGT +
Preference number: 2 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKELSKP*VHILFC
Trigger: ACAAAATAAGATGTGCACCCATGGTTTGGAGAGTTC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATCCCTTGCAACTTGACTaGAAAGATTATTACCTGACC +
Preference number: 2 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNPLQLD*KDYYLT
Trigger: GGTCAGGTAATAATCTTTCCAGTCAAGTTGCAAGGG...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCATTAGCAACTTTGGCTaGAGAGTTGTACAAAACATC +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPISNFG*RVVQNI
Trigger: GATGTTTTGTACAACTCTTCAGCCAAAGTTGCTAAT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR TCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTAATAATCCATTTACATTaGAGCTCCATGAGGTGGTAC +
Preference number: 2 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVIIHLH*SSMRWY
Trigger: GTACCACCTCATGGAGCTTCAATGTAAATGGATTAT...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR GCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCGAAATAAGCATCCCTTaGAACTTGACTGGAAAGATT +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPEISIP*NLTGKI
Trigger: AATCTTTCCAGTCAAGTTGCAAGGGATGCTTATTTC...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR CAA 90 bp ACATTCCCACCTTTTAGTCTAGCATCACAACACTTCCCCTGGGATTaGTACTTATTTATATATTATCTAAGTCCTAGGAAGTTGGTAACA +
Preference number: 2 (lower is better)
Translates to: TFPPFSLASQHFPWD*YLFIYYLSPRKLVT
Trigger: TGTTACCAACTTCCTAGGACTTAGATAATATATAAATAAGTACAAATCCCAGGGGAAGTGTTGTGATGCTAGACTAAAAGGTGGGAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR TCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTATCTAAAACATGCGTGTaGAATATGAAGAGATCAAGC +
Preference number: 2 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVSKTCV*NMKRSS
Trigger: GCTTGATCTCTTCATATTTCACACGCATGTTTTAGA...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR GCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCAATAGTGTATCTCACTaGTCAGCTAATATAGGAACT +
Preference number: 2 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPNSVSH*SANIGT
Trigger: AGTTCCTATATTAGCTGAGCAGTGAGATACACTATT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CAA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCGATCTACAGATGCAGTaGCTCATGAGTTTACACATG +
Preference number: 3 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGDLQMQ*LMSLHM
Trigger: CATGTGTAAACTCATGAGCAACTGCATCTGTAGATC...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR CCA 72 bp ATTATTTCTAAGCCTATACTAGAAACCAGTGCAAGATaGAATGCCAAAATCACCACCAACTCGACACGACCG +
Preference number: 3 (lower is better)
Translates to: IISKPILETSAR*NAKITTNSTRP
Trigger: CGGTCGTGTCGAGTTGGTGGTGATTTTGGCATTCCATCTTGCACTGGTTTCTAGTATAGGCTTAGAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR GCA 72 bp ACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATaGAAGTACGGATTTAATGGTGGTGGCCTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: TKASVSCSSDIP*KYGFNGGGLQK
Trigger: TTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR-3UTR CAA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCGTAGGTGTGCACCGTTaGGAAATAGTGTATCTCACT +
Preference number: 3 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPVGVHR*EIVYLT
Trigger: AGTGAGATACACTATTTCCAAACGGTGCACACCTAC...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGATCTACAGATGCAGTaGCTCATGAGTTTACACATG +
Preference number: 3 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKDLQMQ*LMSLHM
Trigger: CATGTGTAAACTCATGAGCAACTGCATCTGTAGATC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
3UTR-3UTR CAA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCCAATATCATTTTTCCTaGGAGTTAATCCCCGCAAGA +
Preference number: 3 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSQYHFS*ELIPAR
Trigger: TCTTGCGGGGATTAACTCCAAGGAAAAATGATATTG...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCAGCATCCCTTGCAACTaGACTGGAAAGATTATTACC +
Preference number: 3 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPSIPCN*TGKIIT
Trigger: GGTAATAATCTTTCCAGTCAAGTTGCAAGGGATGCT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR-3UTR CAA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATGATCTACAGATGCAGTaGCTCATGAGTTTACACATG +
Preference number: 3 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNDLQMQ*LMSLHM
Trigger: CATGTGTAAACTCATGAGCAACTGCATCTGTAGATC...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
3UTR-3UTR CAA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCAGAAATAAGCATCCCTaGCAACTTGACTGGAAAGAT +
Preference number: 3 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPRNKHP*QLDWKD
Trigger: ATCTTTCCAGTCAAGTTGCAAGGGATGCTTATTTCT...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR GCA 72 bp AATGTTTTAGCCAGGCATTCCACTAACAAAACGCCATaGCATATCTACCTAGTCTTTGATATCTGGGTATTA +
Preference number: 3 (lower is better)
Translates to: NVLARHSTNKTP*HIYLVFDIWVL
Trigger: TAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTTGTTAGTGGAATGCCTGGCTAAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
3UTR CCA 72 bp ATAAATAAGCAAGTATTCCCTCCAAGATTCACTAATTaGGATAAAAGTCTCAGGGTAAGCCCACAAGAATGG +
Preference number: 3 (lower is better)
Translates to: INKQVFPPRFTN*DKSLRVSPQEW
Trigger: CCATTCTTGTGGGCTTACCCTGAGACTTTTATCCCAATTAGTGAATCTTGGAGGGAATACTTGCTTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR TCA 72 bp AGCATCCCTTGCAACTTGACTGGAAAGATTATTACCTaGCCAATTATTTCTAAGCCTATACTAGAAACCAGT +
Preference number: 3 (lower is better)
Translates to: SIPCNLTGKIIT*PIISKPILETS
Trigger: ACTGGTTTCTAGTATAGGCTTAGAAATAATTGGTCAGGTAATAATCTTTCCAGTCAAGTTGCAAGGGATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR CCA 72 bp GTTGATTTCTCTGTTCATAATCATAGCTTCAAACATTaGCCCTTCACGTACAACAAACTCTATCATTCGATG +
Preference number: 3 (lower is better)
Translates to: VDFSVHNHSFKH*PFTYNKLYHSM
Trigger: CATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATGATTATGAACAGAGAAATCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
3UTR TCA 72 bp ATTGTAAATGGCCTTGAATTGTACGATAGGTGGCATTaGGGTCTGAAAATATCTGACATAACTTTGTTTCAA +
Preference number: 3 (lower is better)
Translates to: IVNGLELYDRWH*GLKISDITLFQ
Trigger: TTGAAACAAAGTTATGTCAGATATTTTCAGACCTCAATGCCACCTATCGTACAATTCAAGGCCATTTACAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
3UTR CCA 72 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTaGGTATTAGTATTACCCAAGAGAAACTTATCAAAA +
Preference number: 3 (lower is better)
Translates to: KTPCHIYLVFDI*VLVLPKRNLSK
Trigger: TTTTGATAAGTTTCTCTTGGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCCGCCATCTTGAGCTTTaGCCCTCCTTCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGRHLEL*PSFGGG
Trigger: GCCGCCGCCGAAGGAGGGGCAAAGCTCAAGATGGCG...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR TCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAAAGAGCGGATCTCAGTaGAGCCCGCCAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPKSGSQ*SPPEAP
Trigger: AGGCGCCTCTGGCGGGCTTCACTGAGATCCGCTCTT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCGGGAGTCACGGTGCTTaGTCGCGTTATTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGGSHGA*SRYWVR
Trigger: CCGGACCCAATAACGCGACCAAGCACCGTGACTCCC...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR TCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCGGGCAGCCGCTCACGTaGCTTCCGGTGTCAGTAATT +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGGQPLT*LPVSVI
Trigger: AATTACTGACACCGGAAGTCACGTGAGCGGCTGCCC...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR TCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTACTGGAGCTGACTGGTaGCCTGGCGCTCGATGGACG +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISTGADW*PGARWT
Trigger: CGTCCATCGAGCGCCAGGTCACCAGTCAGCTCCAGT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR GCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTACGCCATCTTGAGCTTTaGCCCTCCTTCGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVRHLEL*PSFGGG
Trigger: GCCGCCGCCGAAGGAGGGGCAAAGCTCAAGATGGCG...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCACAGTCCGGATGGAGGTaGGGGAAGCGTATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPQSGWR*GKRMFH
Trigger: ATGGAACATACGCTTCCCCCACCTCCATCCGGACTG...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCTTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGFELAF*DPPGVL
Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAAACCGCTCTCTAGGCTaGGCATTAAAAGGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPNRSLG*ALKGSP
Trigger: CGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGGTT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCACAAGCTCTTCCTCGATaGGGGCACCATCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPQALPR*GHHQGH
Trigger: ATGACCTTGATGGTGCCCCCATCGAGGAAGAGCTTG...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCTTTTGTCCGCCATCTTaGGCTTTGCCCCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSFCPPS*ALPLLR
Trigger: CCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAA...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTTTTTGTCCGCCATCTTaGGCTTTGCCCCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCFCPPS*ALPLLR
Trigger: CCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAA...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR TCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTAGGCGCCTGCAAGGCTaGATAGTCGACTGTCGAGAT +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCRRLQG*IVDCRD
Trigger: ATCTCGACAGTCGACTATTCAGCCTTGCAGGCGCCT...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR GCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGTCACTCGTCTACCACTaGTACTGCGAGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLSLVYH*YCEMGW
Trigger: CCAGCCCATCTCGCAGTAGCAGTGGTAGACGAGTGA...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCCGCTTTTTAAAGACGTaGACTGGCCATCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGRFLKT*TGHLGR
Trigger: CCTCCCTAGATGGCCAGTGCACGTCTTTAAAAAGCG...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAATCTCGTCTTTGAACTaGCCTTCTGAGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPISSLN*PSEIRL
Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGACGAGAT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGTTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLFELAF*DPPGVL
Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp TCAAACATTGGCCCTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGATCTCCTACATCATGTaGGCCAGGTGCGTAATCATC +
Preference number: 4 (lower is better)
Translates to: SNIGPSRTTNSIIRCIRAISYIM*ARCVII
Trigger: GATGATTACGCACCTGGCTCACATGATGTAGGAGAT...CGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR TCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCATCTCCTACATCATGTaGGCCAGGTGCGTAATCATC +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGISYIM*ARCVII
Trigger: GATGATTACGCACCTGGCTCACATGATGTAGGAGAT...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATCACTCGTCTACCACTaGTACTGCGAGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKSLVYH*YCEMGW
Trigger: CCAGCCCATCTCGCAGTAGCAGTGGTAGACGAGTGA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR GCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTTCCTGGGAGTCACGGTaGTTGGTCGCGTTATTGGGT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISSWESR*LVALLG
Trigger: ACCCAATAACGCGACCAAGCACCGTGACTCCCAGGA...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGCTTCTGAGATCCGCCTaGCGTTTTGTCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLLLRSA*RFVRHL
Trigger: AAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAG...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCCAGTCCGGATGGAGGTaGGGGAAGCGTATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPQSGWR*GKRMFH
Trigger: ATGGAACATACGCTTCCCCCACCTCCATCCGGACTG...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCAGTCCGGATGGAGGTaGGGGAAGCGTATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISQSGWR*GKRMFH
Trigger: ATGGAACATACGCTTCCCCCACCTCCATCCGGACTG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACAGTCCGGATGGAGGTaGGGGAAGCGTATGTTCCAT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKQSGWR*GKRMFH
Trigger: ATGGAACATACGCTTCCCCCACCTCCATCCGGACTG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAAAAGGCAGTCCGGATaGAGGTGGGGGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKKRQSG*RWGKRM
Trigger: CATACGCTTCCCCCACCTCCATCCGGACTGCCTTTT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCAAAAGGCAGTCCGGATaGAGGTGGGGGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPKRQSG*RWGKRM
Trigger: CATACGCTTCCCCCACCTCCATCCGGACTGCCTTTT...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTAAAAGGCAGTCCGGATaGAGGTGGGGGAAGCGTATG +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISKRQSG*RWGKRM
Trigger: CATACGCTTCCCCCACCTCCATCCGGACTGCCTTTT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCAGGAGATCTAGACCGTaGTCGCCTAGACCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSRRSRP*SPRPFR
Trigger: CCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCTTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPFELAF*DPPGVL
Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATTTGAACTGGCCTTCTaGGATCCGCCTGGCGTTTTG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKFELAF*DPPGVL
Trigger: CAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAAA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTCTAGGAGAATCTTTGTaGGATGACCTGGACCGTGAG +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCLGESL*DDLDRE
Trigger: CTCACGGTCCAGGTCATCTCACAAAGATTCTCCTAG...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGAGAATCAGGGCCAGCTaGTACTTCACCCTCTTATCC +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLRIRAS*YFTLLS
Trigger: GGATAAGAGGGTGAAGTATCAGCTGGCCCTGATTCT...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAACCGCTCTCTAGGCTaGGCATTAAAAGGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKNRSLG*ALKGSP
Trigger: CGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGGTT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR GCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTAACCGCTCTCTAGGCTaGGCATTAAAAGGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISNRSLG*ALKGSP
Trigger: CGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGGTT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTATCACTCGTCTACCACTaGTACTGCGAGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVSLVYH*YCEMGW
Trigger: CCAGCCCATCTCGCAGTAGCAGTGGTAGACGAGTGA...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACAAGCTCTTCCTCGATaGGGGCACCATCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKQALPR*GHHQGH
Trigger: ATGACCTTGATGGTGCCCCCATCGAGGAAGAGCTTG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCCAAGCTCTTCCTCGATaGGGGCACCATCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPQALPR*GHHQGH
Trigger: ATGACCTTGATGGTGCCCCCATCGAGGAAGAGCTTG...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGATCTCGTCTTTGAACTaGCCTTCTGAGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLISSLN*PSEIRL
Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGACGAGAT...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCATCTCGTCTTTGAACTaGCCTTCTGAGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSISSLN*PSEIRL
Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGACGAGAT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCTTCTGAGATCCGCCTaGCGTTTTGTCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISLLRSA*RFVRHL
Trigger: AAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACTTCTGAGATCCGCCTaGCGTTTTGTCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKLLRSA*RFVRHL
Trigger: AAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTTTGTGAGATGACCTaGACCGTGAGCTCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGLCEMT*TVSSLY
Trigger: ATAAAGAGAGCTCACGGTCCAGGTCATCTCACAAAG...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGGCTTGGTCGCGTTATTaGGTCCGGGAATTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLAWSRY*VREFRE
Trigger: TTCTCTGAATTCCCGGACCCAATAACGCGACCAAGC...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR TCA 90 bp CTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGAGCAAATTCCTTTCTGACCATCAGAATCTaGCTGAGGAGGTTCAAATCG +
Preference number: 4 (lower is better)
Translates to: LHVQQTLSFDVSGRANSFLTIRI*LRRFKS
Trigger: CGATTTGAACCTCCTCAGTCAGATTCTGATGGTCAG...AAAGGAATTTGCTCGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR TCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGCTGACCATCAGAATCTaGCTGAGGAGGTTCAAATCG +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLLTIRI*LRRFKS
Trigger: CGATTTGAACCTCCTCAGTCAGATTCTGATGGTCAG...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTCTAGGAGAATCTTTGTaGGATGACCTGGACCGTGAG +
Preference number: 4 (lower is better)
Translates to: STKASVSCSSDIPCKYGFLGESL*DDLDRE
Trigger: CTCACGGTCCAGGTCATCTCACAAAGATTCTCCTAG...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACTAGGAGAATCTTTGTaGGATGACCTGGACCGTGAG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKLGESL*DDLDRE
Trigger: CTCACGGTCCAGGTCATCTCACAAAGATTCTCCTAG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTTGTGGAGATCTGGACTaGGATCTGGACTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCCGDLD*DLDFFP
Trigger: AGGAAAGAAGTCCAGATCCCAGTCCAGATCTCCACA...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAATCTCGTCTTTGAACTaGCCTTCTGAGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKISSLN*PSEIRL
Trigger: CAGGCGGATCTCAGAAGGCCAGTTCAAAGACGAGAT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TCAAACATTGGCCCTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGCACAAGAAGAGATGGTaGTCTTTCATTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: SNIGPSRTTNSIIRCIRAHKKRW*SFIGRL
Trigger: CAGTCTTCCAATGAAAGACCACCATCTCTTCTTGTG...CGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR CCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTACTTCTGAGATCCGCCTaGCGTTTTGTCCGCCATCTT +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVLLRSA*RFVRHL
Trigger: AAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAG...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCAGGCGGAATGTATATTaGATGTGGAGGAATAGGTAC +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGRRNVY*MWRNRY
Trigger: GTACCTATTCCTCCACATCCAATATACATTCCGCCT...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTCGTCCGCCATTTAGTTaGAGAATCTCCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCRPPFS*RISLQN
Trigger: ATTCTGCAGGGAGATTCTCCAACTAAATGGCGGACG...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCTTCCAGAAGAGGTCTTaGGAGATTCTGATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSFQKRS*EILMRR
Trigger: TCTCCTCATCAGAATCTCTCAAGACCTCTTCTGGAA...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGTTCCAGAAGAGGTCTTaGGAGATTCTGATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLFQKRS*EILMRR
Trigger: TCTCCTCATCAGAATCTCTCAAGACCTCTTCTGGAA...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTCCATCAGAATCTGACTaGGGAGGTTCAAATCGACTT +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCPSESD*GGSNRL
Trigger: AAGTCGATTTGAACCTCCTCAGTCAGATTCTGATGG...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACTGACCATCAGAATCTaGCTGAGGAGGTTCAAATCG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKLTIRI*LRRFKS
Trigger: CGATTTGAACCTCCTCAGTCAGATTCTGATGGTCAG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCATCTCCTACATCATGTaGGCCAGGTGCGTAATCATC +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPISYIM*ARCVII
Trigger: GATGATTACGCACCTGGCTCACATGATGTAGGAGAT...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAATCTCCTACATCATGTaGGCCAGGTGCGTAATCATC +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKISYIM*ARCVII
Trigger: GATGATTACGCACCTGGCTCACATGATGTAGGAGAT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGTGTTTCTTGCTCTTCTaGCATTCCATGCAAGTACGG +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLCFLLF*HSMQVR
Trigger: CCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACA...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGAATCTTCCCATGCTCTaGAGCAAGTCATTACCCGTT +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLNLPML*SKSLPV
Trigger: AACGGGTAATGACTTGCTTCAGAGCATGGGAAGATT...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTACTAGGAGAATCTTTGTaGGATGACCTGGACCGTGAG +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVLGESL*DDLDRE
Trigger: CTCACGGTCCAGGTCATCTCACAAAGATTCTCCTAG...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAAAAGCTTCTGTTTCTTaGTCTTCTGACATTCCATGC +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPKASVS*SSDIPC
Trigger: GCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCCAGTGCAAGATGGAATaGCAAAATCACCACCAACTC +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSQCKME*QNHHQL
Trigger: GAGTTGGTGGTGATTTTGGCATTCCATCTTGCACTG...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATGTGGAGATCTGGACTaGGATCTGGACTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKCGDLD*DLDFFP
Trigger: AGGAAAGAAGTCCAGATCCCAGTCCAGATCTCCACA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAATGGTGGTCTTTCATTaGAAGACTGATTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPMVVFH*KTDLED
Trigger: ATCCTCCAAATCAGTCTTCCAATGAAAGACCACCAT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCGTCCGCCATTTAGTTaGAGAATCTCCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISRPPFS*RISLQN
Trigger: ATTCTGCAGGGAGATTCTCCAACTAAATGGCGGACG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACGTCCGCCATTTAGTTaGAGAATCTCCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKRPPFS*RISLQN
Trigger: ATTCTGCAGGGAGATTCTCCAACTAAATGGCGGACG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATGTGGAAAACAACTCTaGCACGTAGCTGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKCGKQL*HVAVVE
Trigger: CTCTACCACAGCTACGTGCCAGAGTTGTTTTCCACA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp TCAAACATTGGCCCTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGGATTCCAATTCATCCTaGAACTTCATAACTTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNIGPSRTTNSIIRCIRADSNSS*NFITLS
Trigger: GCTCAAAGTTATGAAGTTTCAGGATGAATTGGAATC...CGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR TCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAGATTCCAATTCATCCTaGAACTTCATAACTTTGAGC +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPDSNSS*NFITLS
Trigger: GCTCAAAGTTATGAAGTTTCAGGATGAATTGGAATC...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATTCCAGAAGAGGTCTTaGGAGATTCTGATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKFQKRS*EILMRR
Trigger: TCTCCTCATCAGAATCTCTCAAGACCTCTTCTGGAA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCCCATCAGAATCTGACTaGGGAGGTTCAAATCGACTT +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPPSESD*GGSNRL
Trigger: AAGTCGATTTGAACCTCCTCAGTCAGATTCTGATGG...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACCATCAGAATCTGACTaGGGAGGTTCAAATCGACTT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKPSESD*GGSNRL
Trigger: AAGTCGATTTGAACCTCCTCAGTCAGATTCTGATGG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTACTGACCATCAGAATCTaGCTGAGGAGGTTCAAATCG +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVLTIRI*LRRFKS
Trigger: CGATTTGAACCTCCTCAGTCAGATTCTGATGGTCAG...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCTGTTTCTTGCTCTTCTaGCATTCCATGCAAGTACGG +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPCFLLF*HSMQVR
Trigger: CCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACA...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATGTTTCTTGCTCTTCTaGCATTCCATGCAAGTACGG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKCFLLF*HSMQVR
Trigger: CCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAATTAGCAACTTTGGCTaGAGAGTTGTACAAAACATC +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPISNFG*RVVQNI
Trigger: GATGTTTTGTACAACTCTTCAGCCAAAGTTGCTAAT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAATCTTCCCATGCTCTaGAGCAAGTCATTACCCGTT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKNLPML*SKSLPV
Trigger: AACGGGTAATGACTTGCTTCAGAGCATGGGAAGATT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGTCTGATGCCAGTGTTTaGAAGATAGCCTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLSDASV*KIAYRR
Trigger: TCTTCTGTAGGCTATCTTTCAAACACTGGCATCAGA...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR GCA 90 bp TCAAACATTGGCCCTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGACTAACAAAACGCCATaGCATATCTACCTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SNIGPSRTTNSIIRCIRATNKTP*HIYLVF
Trigger: AAAGACTAGGTAGATATGGCATGGCGTTTTGTTAGT...CGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR GCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCGAACATGATCTTTCCTaGAACTGGAAGACCATGCTT +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSEHDLS*NWKTML
Trigger: AAGCATGGTCTTCCAGTTGCAGGAAAGATCATGTTC...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCCAACCCTTGATAGATaGGAACCAGTCGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISPTLDR*EPVVFP
Trigger: AGGAAATACGACTGGTTCGCATCTATCAAGGGTTGG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATTGTGGAGATCTGGACTaGGATCTGGACTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNCGDLD*DLDFFP
Trigger: AGGAAAGAAGTCCAGATCCCAGTCCAGATCTCCACA...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTCACAAGAAGAGATGGTaGTCTTTCATTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCHKKRW*SFIGRL
Trigger: CAGTCTTCCAATGAAAGACCACCATCTCTTCTTGTG...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGAGGCGGAATGTATATTaGATGTGGAGGAATAGGTAC +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLRRNVY*MWRNRY
Trigger: GTACCTATTCCTCCACATCCAATATACATTCCGCCT...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCAGGCGGAATGTATATTaGATGTGGAGGAATAGGTAC +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSRRNVY*MWRNRY
Trigger: GTACCTATTCCTCCACATCCAATATACATTCCGCCT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTACATGGGCTGGTGTCTaGTTTTCAAATAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCTWAGV*FSNKNL
Trigger: CAGGTTCTTATTTGAAAACCAGACACCAGCCCATGT...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCCTTTGTGAGATGACCTaGACCGTGAGCTCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPLCEMT*TVSSLY
Trigger: ATAAAGAGAGCTCACGGTCCAGGTCATCTCACAAAG...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCTTTGTGAGATGACCTaGACCGTGAGCTCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISLCEMT*TVSSLY
Trigger: ATAAAGAGAGCTCACGGTCCAGGTCATCTCACAAAG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCGAACTTACGCCACCATaGAGGCAAATGTGTACAGAA +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIELTPP*RQMCTE
Trigger: TTCTGTACACATTTGCCTCCATGGTGGCGTAAGTTC...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACGTCCGCCATTTAGTTaGAGAATTTGCCTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKRPPFS*RICLQN
Trigger: ATTCTGCAGGCAAATTCTCCAACTAAATGGCGGACG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493598.6
CDS-3UTR TCA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAGATGCAGTTGCTCATaGGTTTACACATGCATACAC +
Preference number: 4 (lower is better)
Translates to: STKASVSCSSDIPCKYGFRCSCS*VYTCIH
Trigger: GTGTATGCATGTGTAAACTCATGAGCAACTGCATCT...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCAGATGCAGTTGCTCATaGGTTTACACATGCATACAC +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPRCSCS*VYTCIH
Trigger: GTGTATGCATGTGTAAACTCATGAGCAACTGCATCT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATCTGATGCCAGTGTTTaGAAGATAGCCTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKSDASV*KIAYRR
Trigger: TCTTCTGTAGGCTATCTTTCAAACACTGGCATCAGA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTATCCATGAGGTGGTACTaGATAAACACTGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVSMRWY*INTEAS
Trigger: TGATGCCTCAGTGTTTATTCAGTACCACCTCATGGA...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATATAAAGTGACAGTCTaGTCTGGAAAGCAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKYKVTV*SGKQLN
Trigger: GTTGAGCTGCTTTCCAGATCAGACTGTCACTTTATA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCATGTTCTTCTTTAGCTaGATTAACAACACCCCCTCG +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPMFFFS*INNTPS
Trigger: CGAGGGGGTGTTGTTAATGCAGCTAAAGAAGAACAT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCAAAGCTTCTGTTTCTTaGTCTTCTGACATTCCATGC +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSKASVS*SSDIPC
Trigger: GCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCCAAGTCATTACCCGTTaGTTAAAGTTTTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGQVITR*LKFSDC
Trigger: ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTG...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCACAAGTCATTACCCGTTaGTTAAAGTTTTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPQVITR*LKFSDC
Trigger: ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTG...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCCACAAGAAGAGATGGTaGTCTTTCATTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPHKKRW*SFIGRL
Trigger: CAGTCTTCCAATGAAAGACCACCATCTCTTCTTGTG...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACACAAGAAGAGATGGTaGTCTTTCATTGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKHKKRW*SFIGRL
Trigger: CAGTCTTCCAATGAAAGACCACCATCTCTTCTTGTG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCAATGTATATTGGATGTaGAGGAATAGGTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGNVYWM*RNRYSF
Trigger: AAAGCTGTACCTATTCCTCCACATCCAATATACATT...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAGGCGGAATGTATATTaGATGTGGAGGAATAGGTAC +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKRRNVY*MWRNRY
Trigger: GTACCTATTCCTCCACATCCAATATACATTCCGCCT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAACATGGGCTGGTGTCTaGTTTTCAAATAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKTWAGV*FSNKNL
Trigger: CAGGTTCTTATTTGAAAACCAGACACCAGCCCATGT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGATCTTTCCTGCAACTaGAAGACCATGCTTATGAAC +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKDLSCN*KTMLMN
Trigger: GTTCATAAGCATGGTCTTCCAGTTGCAGGAAAGATC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGGTCGTATTTCCTTTGTaGGAAAGGAGTCGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLVVFPL*ERSRFL
Trigger: TAAAAAGCGACTCCTTTCCCACAAAGGAAATACGAC...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR TCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCGATTCCAATTCATCCTaGAACTTCATAACTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSDSNSS*NFITLS
Trigger: GCTCAAAGTTATGAAGTTTCAGGATGAATTGGAATC...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR TCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTAGCATCCCTTGCAACTTaGCTGGAAAGATTATTACCT +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVASLAT*LERLLP
Trigger: AGGTAATAATCTTTCCAGTCAAGTTGCAAGGGATGC...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCTTTTGCTCTGTAACTTaGGTGTCCTTCAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPFCSVT*VSFRQE
Trigger: TTCTTGTCTGAAGGACACTCAAGTTACAGAGCAAAA...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCCATGCGTGTGAAATATaGAGAGATCAAGCACTTTGT +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIHACEI*RDQALC
Trigger: ACAAAGTGCTTGATCTCTTCATATTTCACACGCATG...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTACTTTGACTATGGCTTaGGACAGAGTCTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISTLTMA*DRVFSK
Trigger: TTTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR GCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCACTTTGACTATGGCTTaGGACAGAGTCTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWITLTMA*DRVFSK
Trigger: TTTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGT...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAACTTTGACTATGGCTTaGGACAGAGTCTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKTLTMA*DRVFSK
Trigger: TTTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR GCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCTCTTCTGACATTCCATaGAAGTACGGATTTAATGGT +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSSSDIP*KYGFNG
Trigger: ACCATTAAATCCGTACTTGCATGGAATGTCAGAAGA...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp ATTTTTGAACATACGAAAATCTTCCGTCCGCCATTTAGTTGGAGAATCTCCCTGTCTTCTGACATTCCATaGAAGTACGGATTTAATGGT +
Preference number: 4 (lower is better)
Translates to: IFEHTKIFRPPFSWRISLSSDIP*KYGFNG
Trigger: ACCATTAAATCCGTACTTGCATGGAATGTCAGAAGA...CAGGGAGATTCTCCAACTAAATGGCGGACGGAAGATTTTCGTATGTTCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTAAAGCTTCTGTTTCTTaGTCTTCTGACATTCCATGC +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISKASVS*SSDIPC
Trigger: GCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCTCTCCAAACCATGGGTaGACATCTTATTTTGTGACT +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWISPNHG*TSYFVT
Trigger: AGTCACAAAATAAGATGTGCACCCATGGTTTGGAGA...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAATCTGGACTGGGATCTaGACTTCTTTCCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKIWTGI*TSFLIF
Trigger: AAAAATCAGGAAAGAAGTCCAGATCCCAGTCCAGAT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTATAATTATGTTTTCTTaGGCTCTTAGGTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: STKASVSCSSDIPCKYGFIIMFS*ALRSCP
Trigger: CGGACACGACCTAAGAGCCCAAGAAAACATAATTAT...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAATAATTATGTTTTCTTaGGCTCTTAGGTCGTGTCCG +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKIIMFS*ALRSCP
Trigger: CGGACACGACCTAAGAGCCCAAGAAAACATAATTAT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAATGGTGGTCTTTCATTaGAAGACTGATTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKMVVFH*KTDLED
Trigger: ATCCTCCAAATCAGTCTTCCAATGAAAGACCACCAT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTATGGTGGTCTTTCATTaGAAGACTGATTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISMVVFH*KTDLED
Trigger: ATCCTCCAAATCAGTCTTCCAATGAAAGACCACCAT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCATAGCTTCAAACATTaGCCCTTCACGTACAACAAA +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISHSFKH*PFTYNK
Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTCATAGCTTCAAACATTaGCCCTTCACGTACAACAAA +
Preference number: 4 (lower is better)
Translates to: STKASVSCSSDIPCKYGFHSFKH*PFTYNK
Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACATAGCTTCAAACATTaGCCCTTCACGTACAACAAA +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKHSFKH*PFTYNK
Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCGAACTCTCCAAACCATaGGTGCACATCTTATTTTGT +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPELSKP*VHILFC
Trigger: ACAAAATAAGATGTGCACCCATGGTTTGGAGAGTTC...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCTCAAATTTTCAACAATaGAACAAGGCTCACGGAACA +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSSNFQQ*NKAHGT
Trigger: TGTTCCGTGAGCCTTGTTCCATTGTTGAAAATTTGA...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGATTCCAATTCATCCTaGAACTTCATAACTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKDSNSS*NFITLS
Trigger: GCTCAAAGTTATGAAGTTTCAGGATGAATTGGAATC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCATTAGCAACTTTGGCTaGAGAGTTGTACAAAACATC +
Preference number: 4 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPISNFG*RVVQNI
Trigger: GATGTTTTGTACAACTCTTCAGCCAAAGTTGCTAAT...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTATTAGCAACTTTGGCTaGAGAGTTGTACAAAACATC +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISISNFG*RVVQNI
Trigger: GATGTTTTGTACAACTCTTCAGCCAAAGTTGCTAAT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR TCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAATTAGCAACTTTGGCTaGAGAGTTGTACAAAACATC +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKISNFG*RVVQNI
Trigger: GATGTTTTGTACAACTCTTCAGCCAAAGTTGCTAAT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR TCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCAAAGCAAAGATCTTTTaGTTCAGCGCCTTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPKAKIF*FSAFCC
Trigger: ACAACAAAAGGCGCTGAATCAAAAGATCTTTGCTTT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR TCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCAGAAAAACTATAAAGTaGCAGTCTGATCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIRKTIK*QSDLES
Trigger: GCTTTCCAGATCAGACTGTCACTTTATAGTTTTTCT...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCTCTTCTGATTCTTCATaGTGGTCAAATAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSSSDSS*WSNNSH
Trigger: ATGGGAATTATTTGACCAGCATGAAGAATCAGAAGA...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTTCTTCTGATTCTTCATaGTGGTCAAATAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSHALKQVITRCLKFSDCSSDSS*WSNNSH
Trigger: ATGGGAATTATTTGACCAGCATGAAGAATCAGAAGA...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATCTTCTGACATTCCATaGAAGTACGGATTTAATGGT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKSSDIP*KYGFNG
Trigger: ACCATTAAATCCGTACTTGCATGGAATGTCAGAAGA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR GCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCACTAACAAAACGCCATaGCATATCTACCTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWITNKTP*HIYLVF
Trigger: AAAGACTAGGTAGATATGGCATGGCGTTTTGTTAGT...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCTAAAAGTAAGTAGTTaGTCAGAACATGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: TIASPISFFLGVNPRKISLKVSS*SEHGLD
Trigger: ATCCAACCCATGTTCTGAGCAACTACTTACTTTTAG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR GCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCATTATTAACTGGGCTTaGATCGGAAAAACAATATGG +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSIINWA*IGKTIW
Trigger: CCATATTGTTTTTCCGATGCAAGCCCAGTTAATAAT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATATCTGGACTGGGATCTaGACTTCTTTCCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNIWTGI*TSFLIF
Trigger: AAAAATCAGGAAAGAAGTCCAGATCCCAGTCCAGAT...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCAATGTATATTGGATGTaGAGGAATAGGTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSNVYWM*RNRYSF
Trigger: AAAGCTGTACCTATTCCTCCACATCCAATATACATT...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATCATAGCTTCAAACATTaGCCCTTCACGTACAACAAA +
Preference number: 4 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNHSFKH*PFTYNK
Trigger: TTTGTTGTACGTGAAGGGCCAATGTTTGAAGCTATG...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCGCTCAGAACATGGGTTaGATGTATGGAAATCATATT +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPAQNMG*MYGNHI
Trigger: AATATGATTTCCATACATCCAACCCATGTTCTGAGC...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CCA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCGTAAGCCCACAAGAATaGTCTGCAATAAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSVSPQE*SAIKKN
Trigger: ATTTTTCTTTATTGCAGACCATTCTTGTGGGCTTAC...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACCAAGATTCACTAATTaGGATAAAAGTCTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKPRFTN*DKSLRV
Trigger: TACCCTGAGACTTTTATCCCAATTAGTGAATCTTGG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCTCTTCTGATTCTTCATaGTGGTCAAATAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPSSDSS*WSNNSH
Trigger: ATGGGAATTATTTGACCAGCATGAAGAATCAGAAGA...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATCTTCTGATTCTTCATaGTGGTCAAATAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKSSDSS*WSNNSH
Trigger: ATGGGAATTATTTGACCAGCATGAAGAATCAGAAGA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463563.6
ENST00000467348.1
ENST00000473835.7
ENST00000493598.6
CDS-3UTR GCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATTCTTCTGACATTCCATaGAAGTACGGATTTAATGGT +
Preference number: 4 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNSSDIP*KYGFNG
Trigger: ACCATTAAATCCGTACTTGCATGGAATGTCAGAAGA...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCCAAGTCATTACCCGTTaGTTAAAGTTTTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIQVITR*LKFSDC
Trigger: ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTG...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACAAGTCATTACCCGTTaGTTAAAGTTTTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKQVITR*LKFSDC
Trigger: ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR GCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATCTAAAAGTAAGTAGTTaGTCAGAACATGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNLKVSS*SEHGLD
Trigger: ATCCAACCCATGTTCTGAGCAACTACTTACTTTTAG...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR GCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAATAGTGTATCTCACTaGTCAGCTAATATAGGAACT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKNSVSH*SANIGT
Trigger: AGTTCCTATATTAGCTGAGCAGTGAGATACACTATT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGTATATTGGATGTaGAGGAATAGGTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: STKASVSCSSDIPCKYGFNVYWM*RNRYSF
Trigger: AAAGCTGTACCTATTCCTCCACATCCAATATACATT...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CCA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAAATGTATATTGGATGTaGAGGAATAGGTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKNVYWM*RNRYSF
Trigger: AAAGCTGTACCTATTCCTCCACATCCAATATACATT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CCA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTAAGAAATCACACTGTGTaGTCATCAGAACAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVRNHTV*SSEQFK
Trigger: CTTAAACTGTTCTGATGACCACACAGTGTGATTTCT...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CCA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATTCACAACACTTCCCCTaGGATTTGTACTTATTTATA +
Preference number: 4 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNSQHFP*DLYLFI
Trigger: TATAAATAAGTACAAATCCCAGGGGAAGTGTTGTGA...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
3UTR CAA 72 bp TCTTTGGAGCGAGATTCCAATTTTTCTTTATCTTTCTaGTCTCTTTCTCGTTCTCTTTCTAACTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLERDSNFSLSF*SLSRSLSNSFS
Trigger: AGAGAAAGAGTTAGAAAGAGAACGAGAAAGAGACAAGAAAGATAAAGAAAAATTGGAATCTCGCTCCAAAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS GCA 90 bp GGCCTTCTGAGATCCGCCTGGCGTTTTGTCCGCCATCTTGAGCTTTaGCCCTCCTTCGGCGGCGGCAGCAGCACGGGCGAGTCGAGCACC +
Preference number: 5 (lower is better)
Translates to: GLLRSAWRFVRHLEL*PSFGGGSSTGESST
Trigger: GGTGCTCGACTCGCCCGTGCTGCTGCCGCCGCCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473835.7
ENST00000488497.7
ENST00000493782.5
CDS TCA 90 bp CGGCAGCAGCACGGGCGAGTCGAGCACCGAAAGAGCGGATCTCAGTaGAGCCCGCCAGAGGCGCCTGCAAGGCTGAATAGTCGACTGTCG +
Preference number: 5 (lower is better)
Translates to: RQQHGRVEHRKSGSQ*SPPEAPARLNSRLS
Trigger: CGACAGTCGACTATTCAGCCTTGCAGGCGCCTCTGGCGGGCTTCACTGAGATCCGCTCTTTCGGTGCTCGACTCGCCCGTGCTGCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 90 bp TTGAACTGGCCTTCTGAGATCCGCCTGGCGTTTTGTCCGCCATCTTaGGCTTTGCCCCTCCTTCGGCGGCGGCAGCAGCACGGGCGAGTC +
Preference number: 5 (lower is better)
Translates to: LNWPSEIRLAFCPPS*ALPLLRRRQQHGRV
Trigger: GACTCGCCCGTGCTGCTGCCGCCGCCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAGGCCAGTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473835.7
ENST00000488497.7
ENST00000493782.5
CDS TCA 90 bp GAAAGAGCGGATCTCAGTGAAGCCCGCCAGAGGCGCCTGCAAGGCTaGATAGTCGACTGTCGAGATAGCGACCTTAGGGGCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: ERADLSEARQRRLQG*IVDCRDSDLRGSRS
Trigger: TGAGCGGCTGCCCCTAAGGTCGCTATCTCGACAGTCGACTATTCAGCCTTGCAGGCGCCTCTGGCGGGCTTCACTGAGATCCGCTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CCA 90 bp CTCAGCCGCGCTCACTCCGCTAGTTTTCCTGGGAGTCACGGTGCTTaGTCGCGTTATTGGGTCCGGGAATTCAGAGAATCAGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: LSRAHSASFPGSHGA*SRYWVREFRESGPA
Trigger: AGCTGGCCCTGATTCTCTGAATTCCCGGACCCAATAACGCGACCAAGCACCGTGACTCCCAGGAAAACTAGCGGAGTGAGCGCGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CCA 90 bp CACTCCGCTAGTTTTCCTGGGAGTCACGGTGCTTGGTCGCGTTATTaGGTCCGGGAATTCAGAGAATCAGGGCCAGCTGATACTTCACCC +
Preference number: 5 (lower is better)
Translates to: HSASFPGSHGAWSRY*VREFRESGPADTSP
Trigger: GGGTGAAGTATCAGCTGGCCCTGATTCTCTGAATTCCCGGACCCAATAACGCGACCAAGCACCGTGACTCCCAGGAAAACTAGCGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 90 bp GGAGGAGCTTTTACTTCAACTCAAAATAGGACTGGAGCTGACTGGTaGCCTGGCGCTCGATGGACGGAAACGCTGTTCTTGCCGCTTCGG +
Preference number: 5 (lower is better)
Translates to: GGAFTSTQNRTGADW*PGARWTETLFLPLR
Trigger: CCGAAGCGGCAAGAACAGCGTTTCCGTCCATCGAGCGCCAGGTCACCAGTCAGCTCCAGTCCTATTTTGAGTTGAAGTAAAAGCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 90 bp TTGGTCGCGTTATTGGGTCCGGGAATTCAGAGAATCAGGGCCAGCTaGTACTTCACCCTCTTATCCCAACGCCAACCCTTGATAGATGCG +
Preference number: 5 (lower is better)
Translates to: LVALLGPGIQRIRAS*YFTLLSQRQPLIDA
Trigger: CGCATCTATCAAGGGTTGGCGTTGGGATAAGAGGGTGAAGTATCAGCTGGCCCTGATTCTCTGAATTCCCGGACCCAATAACGCGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CCA 90 bp CCAACGCCAACCCTTGATAGATGCGAACCAGTCGTATTTCCTTTGTaGGAAAGGAGTCGCTTTTTAAAGACGTGCACTGGCCATCTAGGG +
Preference number: 5 (lower is better)
Translates to: PTPTLDRCEPVVFPL*ERSRFLKTCTGHLG
Trigger: CCCTAGATGGCCAGTGCACGTCTTTAAAAAGCGACTCCTTTCCCACAAAGGAAATACGACTGGTTCGCATCTATCAAGGGTTGGCGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CAA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAGATCCGCCTGGCGTTTaGTCCGCCATCTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPDPPGV*SAILSF
Trigger: AAAGCTCAAGATGGCGGACAAAACGCCAGGCGGATC...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CAA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCGTTTTGTCCGCCATCTaGAGCTTTGCCCCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGVLSAI*SFAPPS
Trigger: CGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAAC...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CAA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTTGGGAGTCACGGTGCTaGGTCGCGTTATTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: SSHALKQVITRCLKFSDCWESRC*VALLGP
Trigger: CGGACCCAATAACGCGACCAAGCACCGTGACTCCCA...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS GCA 90 bp CAGCTGATACTTCACCCTCTTATCCCAACGCCAACCCTTGATAGATaGGAACCAGTCGTATTTCCTTTGTGGGAAAGGAGTCGCTTTTTA +
Preference number: 5 (lower is better)
Translates to: QLILHPLIPTPTLDR*EPVVFPLWERSRFL
Trigger: TAAAAAGCGACTCCTTTCCCACAAAGGAAATACGACTGGTTCGCATCTATCAAGGGTTGGCGTTGGGATAAGAGGGTGAAGTATCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CAA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTTCCCAACGCCAACCCTaGATAGATGCGAACCAGTCG +
Preference number: 5 (lower is better)
Translates to: SSHALKQVITRCLKFSDCSQRQP*IDANQS
Trigger: CGACTGGTTCGCATCTATCAAGGGTTGGCGTTGGGA...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 90 bp CAATTCAGACTCCTTCTAACTTCCTGTTGTCAACCAAGCTCTCCTTaGGCAATGATGCTTGTCCTGGTGCTGAAAAACGTGCTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: QFRLLLTSCCQPSSP*AMMLVLVLKNVLKS
Trigger: AGACTTCAGCACGTTTTTCAGCACCAGGACAAGCATCATTGCTCAAGGAGAGCTTGGTTGACAACAGGAAGTTAGAAGGAGTCTGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGATCCGCCTGGCGTTTaGTCCGCCATCTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKDPPGV*SAILSF
Trigger: AAAGCTCAAGATGGCGGACAAAACGCCAGGCGGATC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp TCAAACATTGGCCCTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGGTTGGGATAACCACTTaGACTATGGCTTGCGACAGA +
Preference number: 5 (lower is better)
Translates to: SNIGPSRTTNSIIRCIRAVGITT*TMACDR
Trigger: TCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAAC...CGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAGGGCCAATGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR CAA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCCCAGTCGTATTTCCTTaGTGGGAAAGGAGTCGCTTT +
Preference number: 5 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGPVVFP*WERSRF
Trigger: AAAGCGACTCCTTTCCCACAAAGGAAATACGACTGG...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 90 bp AAGGCTTCTCCCTTTGGTACATTTTCTGTGAACACACACACACAGTaGTCTTGGTGCTCTTGCCACACTTGTTACAATTCAGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: KASPFGTFSVNTHTQ*SWCSCHTCYNSDSF
Trigger: GAAGGAGTCTGAATTGTAACAAGTGTGGCAAGAGCACCAAGATCACTGTGTGTGTGTGTTCACAGAAAATGTACCAAAGGGAGAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS-3UTR CAA 90 bp TTTCCTGATATTTCAAATCACCAGAGATGTAACAGACAAGAACCCGTTGAAGTAGTTTTGTCCGCCATCTaGAGCTTTGCCCCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: FPDISNHQRCNRQEPVEVVLSAI*SFAPPS
Trigger: CGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAAC...TACTTCAACGGGTTCTTGTCTGTTACATCTCTGGTGATTTGAAATATCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTTGCTTGGTCGCGTTATaGGGTCCGGGAATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: STKASVSCSSDIPCKYGFCLVAL*GPGIQR
Trigger: TCTCTGAATTCCCGGACCCAATAACGCGACCAAGCA...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS-3UTR CAA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCGTTGGGATAACCACTTaGACTATGGCTTGCGACAGA +
Preference number: 5 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSVGITT*TMACDR
Trigger: TCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAAC...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTCTGATGATCTCGTCTTaGAACTGGCCTTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: TIASPISFFLGVNPRKISLMISS*NWPSEI
Trigger: GATCTCAGAAGGCCAGTTCAAAGACGAGATCATCAG...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACTGATGATCTCGTCTTaGAACTGGCCTTCTGAGATC +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKLMISS*NWPSEI
Trigger: GATCTCAGAAGGCCAGTTCAAAGACGAGATCATCAG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp CTTCACGTACAACAAACTCTATCATTCGATGTATCAGGGCGAGCAAATTCCTTTTTTCCAGAAGAGGTCTaGAGAGATTCTGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: LHVQQTLSFDVSGRANSFFPEEV*RDSDEE
Trigger: CTCCTCATCAGAATCTCTCAAGACCTCTTCTGGAAA...AAAGGAATTTGCTCGCCCTGATACATCGAATGATAGAGTTTGTTGTACGTGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000463563.6
CDS-3UTR CAA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCTTCTCAAAATCCTCTTaGTTTTTAGGTGGCGGTAAC +
Preference number: 5 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGFSKSS*FLGGGN
Trigger: GTTACCGCCACCTAAAAACAAAGAGGATTTTGAGAA...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCCACTTTGACTATGGCTaGCGACAGAGTCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSHFDYG*RQSLLK
Trigger: TTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTG...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGTTGGGATAACCACTTaGACTATGGCTTGCGACAGA +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKVGITT*TMACDR
Trigger: TCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAAC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp TCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTAATGGTGGTGGCCAATATCATTTTTCCTaGGAGTTAATCCCCGCAAGA +
Preference number: 5 (lower is better)
Translates to: SVSCSSDIPCKYGFNGGGQYHFS*ELIPAR
Trigger: TCTTGCGGGGATTAACTCCAAGGAAAAATGATATTG...GCCACCACCATTAAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp TTTTTAGGAGATCTAGACCGTGATCGCCTAGACCTTTTAGGTGTCCTTGAACCAACTTTGGCTGAAGAGTaGTACAAAACATCAGAAACC +
Preference number: 5 (lower is better)
Translates to: FLGDLDRDRLDLLGVLEPTLAEE*YKTSET
Trigger: GGTTTCTGATGTTTTGTACAACTCTTCAGCCAAAGT...TGGTTCAAGGACACCTAAAAGGTCTAGGCGATCACGGTCTAGATCTCCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACACTTTGACTATGGCTaGCGACAGAGTCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKHFDYG*RQSLLK
Trigger: TTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGTAGGTGTGCACCGTTaGGAAATAGTGTATCTCACT +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKVGVHR*EIVYLT
Trigger: AGTGAGATACACTATTTCCAAACGGTGCACACCTAC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCGATCTACAGATGCAGTaGCTCATGAGTTTACACATG +
Preference number: 5 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPDLQMQ*LMSLHM
Trigger: CATGTGTAAACTCATGAGCAACTGCATCTGTAGATC...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATCACTTTGACTATGGCTaGCGACAGAGTCTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNHFDYG*RQSLLK
Trigger: TTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTG...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTGCAAGTCATTACCCGTaGCTTAAAGTTTTCAGATTG +
Preference number: 5 (lower is better)
Translates to: SSHALKQVITRCLKFSDCASHYP*LKVFRL
Trigger: CAATCTGAAAACTTTAAGCAACGGGTAATGACTTGC...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCAGCATCCCTTGCAACTaGACTGGAAAGATTATTACC +
Preference number: 5 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPSIPCN*TGKIIT
Trigger: GGTAATAATCTTTCCAGTCAAGTTGCAAGGGATGCT...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp ATTCCATGCAAGTACGGATTTAATGGTGGTGGCCTCCAAAAAGATCCATTTTTGGACTTAATCTGCCTTTaGTTTTATGTCTCTCATCAC +
Preference number: 5 (lower is better)
Translates to: IPCKYGFNGGGLQKDPFLDLICL*FYVSHH
Trigger: GTGATGAGAGACATAAAACAAAAGGCAGATTAAGTC...CAAAAATGGATCTTTTTGGAGGCCACCACCATTAAATCCGTACTTGCATGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp TCTTCCCATGCTCTGAAGCAAGTCATTACCCGTTGCTTAAAGTTTTCAGATTGTGACTTAATCTGCCTTTaGTTTTATGTCTCTCATCAC +
Preference number: 5 (lower is better)
Translates to: SSHALKQVITRCLKFSDCDLICL*FYVSHH
Trigger: GTGATGAGAGACATAAAACAAAAGGCAGATTAAGTC...ACAATCTGAAAACTTTAAGCAACGGGTAATGACTTGCTTCAGAGCATGGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCTTCTCAAAATCCTCTTaGTTTTTAGGTGGCGGTAAC +
Preference number: 5 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPFSKSS*FLGGGN
Trigger: GTTACCGCCACCTAAAAACAAAGAGGATTTTGAGAA...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAATTCTCAAAATCCTCTTaGTTTTTAGGTGGCGGTAAC +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKFSKSS*FLGGGN
Trigger: GTTACCGCCACCTAAAAACAAAGAGGATTTTGAGAA...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACAATATCATTTTTCCTaGGAGTTAATCCCCGCAAGA +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKQYHFS*ELIPAR
Trigger: TCTTGCGGGGATTAACTCCAAGGAAAAATGATATTG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCCAATATCATTTTTCCTaGGAGTTAATCCCCGCAAGA +
Preference number: 5 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPQYHFS*ELIPAR
Trigger: TCTTGCGGGGATTAACTCCAAGGAAAAATGATATTG...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp ACCATTGCATCTCCAATATCATTTTTCCTTGGAGTTAATCCCCGCAAGATTTCTACTTTGGCTGAAGAGTaGTACAAAACATCAGAAACC +
Preference number: 5 (lower is better)
Translates to: TIASPISFFLGVNPRKISTLAEE*YKTSET
Trigger: GGTTTCTGATGTTTTGTACAACTCTTCAGCCAAAGT...AGAAATCTTGCGGGGATTAACTCCAAGGAAAAATGATATTGGAGATGCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAACTTTGGCTGAAGAGTaGTACAAAACATCAGAAACC +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKTLAEE*YKTSET
Trigger: GGTTTCTGATGTTTTGTACAACTCTTCAGCCAAAGT...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp AACAAACTTCACAGAATATATATTCTATCAGGCCTAAGAAATCCTCACCCACCCGAAGCATTAGCAACTTaGGCTGAAGAGTTGTACAAA +
Preference number: 5 (lower is better)
Translates to: NKLHRIYILSGLRNPHPPEALAT*AEELYK
Trigger: TTTGTACAACTCTTCAGCCAAAGTTGCTAATGCTTC...GGGTGGGTGAGGATTTCTTAGGCCTGATAGAATATATATTCTGTGAAGTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp TCTACAAAAGCTTCTGTTTCTTGCTCTTCTGACATTCCATGCAAGTACGGATTTGAAGCATTAGCAACTTaGGCTGAAGAGTTGTACAAA +
Preference number: 5 (lower is better)
Translates to: STKASVSCSSDIPCKYGFEALAT*AEELYK
Trigger: TTTGTACAACTCTTCAGCCAAAGTTGCTAATGCTTC...AAATCCGTACTTGCATGGAATGTCAGAAGAGCAAGAAACAGAAGCTTTTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000488497.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGAAGCATTAGCAACTTaGGCTGAAGAGTTGTACAAA +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKEALAT*AEELYK
Trigger: TTTGTACAACTCTTCAGCCAAAGTTGCTAATGCTTC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCGCAAGTCATTACCCGTaGCTTAAAGTTTTCAGATTG +
Preference number: 5 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIASHYP*LKVFRL
Trigger: CAATCTGAAAACTTTAAGCAACGGGTAATGACTTGC...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGCAAGTCATTACCCGTaGCTTAAAGTTTTCAGATTG +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKASHYP*LKVFRL
Trigger: CAATCTGAAAACTTTAAGCAACGGGTAATGACTTGC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp GAAACTTATCAAAAGCAAATGGTTAGCAAACCACCAAATAGGAGTCTCAGGTCCCTCAGGTCCCTTAATTaGGATAGTCATCTTAGTAAA +
Preference number: 5 (lower is better)
Translates to: ETYQKQMVSKPPNRSLRSLRSLN*DSHLSK
Trigger: TTTACTAAGATGACTATCCAAATTAAGGGACCTGAG...GGACCTGAGACTCCTATTTGGTGGTTTGCTAACCATTTGCTTTTGATAAGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCAGAAATAAGCATCCCTaGCAACTTGACTGGAAAGAT +
Preference number: 5 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPRNKHP*QLDWKD
Trigger: ATCTTTCCAGTCAAGTTGCAAGGGATGCTTATTTCT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp AAGAAAGTCAGTTTCACCCACTGTAAGATAAACCATGACACTTGTATCTGGATCATTTTGCTCTGTAACTaGAGTGTCCTTCAGACAAGA +
Preference number: 5 (lower is better)
Translates to: KKVSFTHCKINHDTCIWIILLCN*SVLQTR
Trigger: TCTTGTCTGAAGGACACTCAAGTTACAGAGCAAAAT...GATCCAGATACAAGTGTCATGGTTTATCTTACAGTGGGTGAAACTGACTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCGACTTAATCTGCCTTTaGTTTTATGTCTCTCATCAC +
Preference number: 5 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPDLICL*FYVSHH
Trigger: GTGATGAGAGACATAAAACAAAAGGCAGATTAAGTC...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAAGACTTAATCTGCCTTTaGTTTTATGTCTCTCATCAC +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKDLICL*FYVSHH
Trigger: GTGATGAGAGACATAAAACAAAAGGCAGATTAAGTC...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS-3UTR CAA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATTTCTCAAAATCCTCTTaGTTTTTAGGTGGCGGTAAC +
Preference number: 5 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNFSKSS*FLGGGN
Trigger: GTTACCGCCACCTAAAAACAAAGAGGATTTTGAGAA...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATACTTTGGCTGAAGAGTaGTACAAAACATCAGAAACC +
Preference number: 5 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNTLAEE*YKTSET
Trigger: GGTTTCTGATGTTTTGTACAACTCTTCAGCCAAAGT...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp AACCACCAAATAGGAGTCTCAGGTCCCTTAATTTGGATAGTCATCTTAGTAAATGAAGCATTAGCAACTTaGGCTGAAGAGTTGTACAAA +
Preference number: 5 (lower is better)
Translates to: NHQIGVSGPLIWIVILVNEALAT*AEELYK
Trigger: TTTGTACAACTCTTCAGCCAAAGTTGCTAATGCTTC...ATTTACTAAGATGACTATCCAAATTAAGGGACCTGAGACTCCTATTTGGTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp GACAGATCTACAGATGCAGTTGCTCATGAGTTTACACATGCATACACAAACAAACTCAGGTCCCTTAATTaGGATAGTCATCTTAGTAAA +
Preference number: 5 (lower is better)
Translates to: DRSTDAVAHEFTHAYTNKLRSLN*DSHLSK
Trigger: TTTACTAAGATGACTATCCAAATTAAGGGACCTGAG...TTTGTTTGTGTATGCATGTGTAAACTCATGAGCAACTGCATCTGTAGATCTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463563.6
ENST00000473835.7
CDS-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCAAAAGCAAAGATCTTTaGATTCAGCGCCTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPKSKDL*IQRLLL
Trigger: CAACAAAAGGCGCTGAATCAAAAGATCTTTGCTTTT...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS-3UTR CAA 90 bp AAAACGCCATGCCATATCTACCTAGTCTTTGATATCTGGGTATTAGTATTACCCTATAATCCATTTACATaGAAGCTCCATGAGGTGGTA +
Preference number: 5 (lower is better)
Translates to: KTPCHIYLVFDIWVLVLPYNPFT*KLHEVV
Trigger: TACCACCTCATGGAGCTTCAATGTAAATGGATTATA...GGGTAATACTAATACCCAGATATCAAAGACTAGGTAGATATGGCATGGCGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473835.7
CDS TCA 90 bp TCCCTCCAAAACAAGAGATTGATATGCCTGTACACTATCAATCAATaGAGAAATTATGTTGCCAAAGCCTTAAGTGAATGGAGTACTACT +
Preference number: 5 (lower is better)
Translates to: SLQNKRLICLYTINQ*RNYVAKALSEWSTT
Trigger: AGTAGTACTCCATTCACTTAAGGCTTTGGCAACATAATTTCTTCATTGATTGATAGTGTACAGGCATATCAATCTCTTGTTTTGGAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480029.5
CDS GCA 72 bp AGATCCGCCTGGCGTTTTGTCCGCCATCTTGAGCTTTaGCCCTCCTTCGGCGGCGGCAGCAGCACGGGCGAG +
Preference number: 6 (lower is better)
Translates to: RSAWRFVRHLEL*PSFGGGSSTGE
Trigger: CTCGCCCGTGCTGCTGCCGCCGCCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAACGCCAGGCGGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473835.7
ENST00000488497.7
ENST00000493782.5
CDS TCA 72 bp CCTTCTGAGATCCGCCTGGCGTTTTGTCCGCCATCTTaGGCTTTGCCCCTCCTTCGGCGGCGGCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: PSEIRLAFCPPS*ALPLLRRRQQH
Trigger: GTGCTGCTGCCGCCGCCGAAGGAGGGGCAAAGCTCAAGATGGCGGACAAAACGCCAGGCGGATCTCAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473835.7
ENST00000488497.7
ENST00000493782.5
CDS TCA 72 bp CACGGGCGAGTCGAGCACCGAAAGAGCGGATCTCAGTaGAGCCCGCCAGAGGCGCCTGCAAGGCTGAATAGT +
Preference number: 6 (lower is better)
Translates to: HGRVEHRKSGSQ*SPPEAPARLNS
Trigger: ACTATTCAGCCTTGCAGGCGCCTCTGGCGGGCTTCACTGAGATCCGCTCTTTCGGTGCTCGACTCGCCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 72 bp GATCTCAGTGAAGCCCGCCAGAGGCGCCTGCAAGGCTaGATAGTCGACTGTCGAGATAGCGACCTTAGGGGC +
Preference number: 6 (lower is better)
Translates to: DLSEARQRRLQG*IVDCRDSDLRG
Trigger: GCCCCTAAGGTCGCTATCTCGACAGTCGACTATTCAGCCTTGCAGGCGCCTCTGGCGGGCTTCACTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CCA 72 bp CCGCTCTCTAGGCTGCGCATTAAAAGGCAGTCCGGATaGAGGTGGGGGAAGCGTATGTTCCATCATAGAAGG +
Preference number: 6 (lower is better)
Translates to: PLSRLRIKRQSG*RWGKRMFHHRR
Trigger: CCTTCTATGATGGAACATACGCTTCCCCCACCTCCATCCGGACTGCCTTTTAATGCGCAGCCTAGAGAGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000461591.5
ENST00000463563.6
ENST00000473835.7
ENST00000488497.7
ENST00000488587.1
ENST00000493598.6
CDS CCA 72 bp AGTTTTCCTGGGAGTCACGGTGCTTGGTCGCGTTATTaGGTCCGGGAATTCAGAGAATCAGGGCCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: SFPGSHGAWSRY*VREFRESGPAD
Trigger: ATCAGCTGGCCCTGATTCTCTGAATTCCCGGACCCAATAACGCGACCAAGCACCGTGACTCCCAGGAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CCA 72 bp GCTCACTCCGCTAGTTTTCCTGGGAGTCACGGTGCTTaGTCGCGTTATTGGGTCCGGGAATTCAGAGAATCA +
Preference number: 6 (lower is better)
Translates to: AHSASFPGSHGA*SRYWVREFRES
Trigger: TGATTCTCTGAATTCCCGGACCCAATAACGCGACCAAGCACCGTGACTCCCAGGAAAACTAGCGGAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CCA 72 bp TCTAGGCTGCGCATTAAAAGGCAGTCCGGATGGAGGTaGGGGAAGCGTATGTTCCATCATAGAAGGCGGAAT +
Preference number: 6 (lower is better)
Translates to: SRLRIKRQSGWR*GKRMFHHRRRN
Trigger: ATTCCGCCTTCTATGATGGAACATACGCTTCCCCCACCTCCATCCGGACTGCCTTTTAATGCGCAGCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461591.5
ENST00000463563.6
ENST00000473835.7
ENST00000488497.7
ENST00000488587.1
ENST00000493598.6
CDS TCA 72 bp TTATTGGGTCCGGGAATTCAGAGAATCAGGGCCAGCTaGTACTTCACCCTCTTATCCCAACGCCAACCCTTG +
Preference number: 6 (lower is better)
Translates to: LLGPGIQRIRAS*YFTLLSQRQPL
Trigger: CAAGGGTTGGCGTTGGGATAAGAGGGTGAAGTATCAGCTGGCCCTGATTCTCTGAATTCCCGGACCCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS TCA 72 bp TTTACTTCAACTCAAAATAGGACTGGAGCTGACTGGTaGCCTGGCGCTCGATGGACGGAAACGCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: FTSTQNRTGADW*PGARWTETLFL
Trigger: CAAGAACAGCGTTTCCGTCCATCGAGCGCCAGGTCACCAGTCAGCTCCAGTCCTATTTTGAGTTGAAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CAA 90 bp ATCCCAACGCCAACCCTTGATAGATGCGAACCAGTCGTATTTCCTTaGTGGGAAAGGAGTCGCTTTTTAAAGACGTGCACTGGCCATCTA +
Preference number: 6 (lower is better)
Translates to: IPTPTLDRCEPVVFP*WERSRFLKTCTGHL
Trigger: TAGATGGCCAGTGCACGTCTTTAAAAAGCGACTCCTTTCCCACAAAGGAAATACGACTGGTTCGCATCTATCAAGGGTTGGCGTTGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CAA 90 bp GCTCTTGCCACACTTGTTACAATTCAGACTCCTTCTAACTTCCTGTaGTCAACCAAGCTCTCCTTGAGCAATGATGCTTGTCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: ALATLVTIQTPSNFL*STKLSLSNDACPGA
Trigger: AGCACCAGGACAAGCATCATTGCTCAAGGAGAGCTTGGTTGACAACAGGAAGTTAGAAGGAGTCTGAATTGTAACAAGTGTGGCAAGAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS TCA 72 bp ATATTTACCAAGTGCTCACTGGTGCCAGGTACCTTGTaGGGCAATGATGAGCAAAAACAAGTTTGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: IFTKCSLVPGTL*GNDEQKQVWSP
Trigger: GGGGGACCAAACTTGTTTTTGCTCATCATTGCCTCACAAGGTACCTGGCACCAGTGAGCACTTGGTAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461844.1
CDS CCA 72 bp ACCCTTGATAGATGCGAACCAGTCGTATTTCCTTTGTaGGAAAGGAGTCGCTTTTTAAAGACGTGCACTGGC +
Preference number: 6 (lower is better)
Translates to: TLDRCEPVVFPL*ERSRFLKTCTG
Trigger: GCCAGTGCACGTCTTTAAAAAGCGACTCCTTTCCCACAAAGGAAATACGACTGGTTCGCATCTATCAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CAA 90 bp ACAATTCAGACTCCTTCTAACTTCCTGTTGTCAACCAAGCTCTCCTaGAGCAATGATGCTTGTCCTGGTGCTGAAAAACGTGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: TIQTPSNFLLSTKLS*SNDACPGAEKRAEV
Trigger: GACTTCAGCACGTTTTTCAGCACCAGGACAAGCATCATTGCTCAAGGAGAGCTTGGTTGACAACAGGAAGTTAGAAGGAGTCTGAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 72 bp AGGGCGAGCAAATTCCTTTCTGTTGGGATAACCACTTaGACTATGGCTTGCGACAGAGTCTTCTCAAAATCC +
Preference number: 6 (lower is better)
Translates to: RASKFLSVGITT*TMACDRVFSKS
Trigger: GGATTTTGAGAAGACTCTGTCGCAAGCCATAGTCAAAGTGGTTATCCCAACAGAAAGGAATTTGCTCGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473835.7
ENST00000493598.6
CDS CAA 72 bp CCAACCCTTGATAGATGCGAACCAGTCGTATTTCCTTaGTGGGAAAGGAGTCGCTTTTTAAAGACGTGCACT +
Preference number: 6 (lower is better)
Translates to: PTLDRCEPVVFP*WERSRFLKTCT
Trigger: AGTGCACGTCTTTAAAAAGCGACTCCTTTCCCACAAAGGAAATACGACTGGTTCGCATCTATCAAGGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488497.7
CDS CAA 72 bp ACTCCTTCTAACTTCCTGTTGTCAACCAAGCTCTCCTaGAGCAATGATGCTTGTCCTGGTGCTGAAAAACGT +
Preference number: 6 (lower is better)
Translates to: TPSNFLLSTKLS*SNDACPGAEKR
Trigger: ACGTTTTTCAGCACCAGGACAAGCATCATTGCTCAAGGAGAGCTTGGTTGACAACAGGAAGTTAGAAGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 90 bp TTCTGTGAACACACACACACAGTGATCTTGGTGCTCTTGCCACACTaGTTACAATTCAGACTCCTTCTAACTTCCTGTTGTCAACCAAGC +
Preference number: 6 (lower is better)
Translates to: FCEHTHTVILVLLPH*LQFRLLLTSCCQPS
Trigger: GCTTGGTTGACAACAGGAAGTTAGAAGGAGTCTGAATTGTAACAAGTGTGGCAAGAGCACCAAGATCACTGTGTGTGTGTGTTCACAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CCA 72 bp AAGCGTATGTTCCATCATAGAAGGCGGAATGTATATTaGATGTGGAGGAATAGGTACAGCTTTACCCCAACC +
Preference number: 6 (lower is better)
Translates to: KRMFHHRRRNVY*MWRNRYSFTPT
Trigger: GGTTGGGGTAAAGCTGTACCTATTCCTCCACATCCAATATACATTCCGCCTTCTATGATGGAACATACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461591.5
ENST00000463563.6
ENST00000473835.7
ENST00000488497.7
ENST00000488587.1
ENST00000493598.6
CDS CAA 72 bp ACTATGGCTTGCGACAGAGTCTTCTCAAAATCCTCTTaGTTTTTAGGTGGCGGTAACATAGGAGCATTAGGG +
Preference number: 6 (lower is better)
Translates to: TMACDRVFSKSS*FLGGGNIGALG
Trigger: CCCTAATGCTCCTATGTTACCGCCACCTAAAAACAAAGAGGATTTTGAGAAGACTCTGTCGCAAGCCATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463563.6
ENST00000473835.7
ENST00000493598.6
CDS CAA 72 bp CACACACACACAGTGATCTTGGTGCTCTTGCCACACTaGTTACAATTCAGACTCCTTCTAACTTCCTGTTGT +
Preference number: 6 (lower is better)
Translates to: HTHTVILVLLPH*LQFRLLLTSCC
Trigger: ACAACAGGAAGTTAGAAGGAGTCTGAATTGTAACAAGTGTGGCAAGAGCACCAAGATCACTGTGTGTGTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 90 bp AACGTGCTGAAGTCTTCCCTCATCAATGCCCTCCATGATCAGCCTTaGACTCTGGAATCCCTTAATATATTCCTCAGATCATTAGAGGTT +
Preference number: 6 (lower is better)
Translates to: NVLKSSLINALHDQP*TLESLNIFLRSLEV
Trigger: AACCTCTAATGATCTGAGGAATATATTAAGGGATTCCAGAGTCAAAGGCTGATCATGGAGGGCATTGATGAGGGAAGACTTCAGCACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS TCA 72 bp TTGTTTTTAAGGCTTCTCCCTTTGGTACATTTTCTGTaGACACACACACACAGTGATCTTGGTGCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: LFLRLLPLVHFL*THTHSDLGALA
Trigger: GGCAAGAGCACCAAGATCACTGTGTGTGTGTGTTCACAGAAAATGTACCAAAGGGAGAAGCCTTAAAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 72 bp AAGTCTTCCCTCATCAATGCCCTCCATGATCAGCCTTaGACTCTGGAATCCCTTAATATATTCCTCAGATCA +
Preference number: 6 (lower is better)
Translates to: KSSLINALHDQP*TLESLNIFLRS
Trigger: TGATCTGAGGAATATATTAAGGGATTCCAGAGTCAAAGGCTGATCATGGAGGGCATTGATGAGGGAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 72 bp TTCTGTGAACACACACACACAGTGATCTTGGTGCTCTaGCCACACTTGTTACAATTCAGACTCCTTCTAACT +
Preference number: 6 (lower is better)
Translates to: FCEHTHTVILVL*PHLLQFRLLLT
Trigger: AGTTAGAAGGAGTCTGAATTGTAACAAGTGTGGCAAGAGCACCAAGATCACTGTGTGTGTGTGTTCACAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 90 bp TGGTACATTTTCTGTGAACACACACACACAGTGATCTTGGTGCTCTaGCCACACTTGTTACAATTCAGACTCCTTCTAACTTCCTGTTGT +
Preference number: 6 (lower is better)
Translates to: WYIFCEHTHTVILVL*PHLLQFRLLLTSCC
Trigger: ACAACAGGAAGTTAGAAGGAGTCTGAATTGTAACAAGTGTGGCAAGAGCACCAAGATCACTGTGTGTGTGTGTTCACAGAAAATGTACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600150.5
CDS CAA 72 bp AGCTGGCAAATAACAATTGGGAAAAGCAAAAGGATATaGGCTCTTGGTACAAAGCACACACTAAATTACACC +
Preference number: 6 (lower is better)
Translates to: SWQITIGKSKRI*ALGTKHTLNYT
Trigger: GGTGTAATTTAGTGTGTGCTTTGTACCAAGAGCCAATATCCTTTTGCTTTTCCCAATTGTTATTTGCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480029.5
CDS CAA 72 bp GAGGGTCCAGATGCATCCATAAGCTTGAATTTTATATaGGTAACAGTTGTTTTCCTTGAAGTAACAGGTTCG +
Preference number: 6 (lower is better)
Translates to: EGPDASISLNFI*VTVVFLEVTGS
Trigger: CGAACCTGTTACTTCAAGGAAAACAACTGTTACCAATATAAAATTCAAGCTTATGGATGCATCTGGACCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485374.5
CDS CAA 90 bp TCCATACACAGCTGGCAAATAACAATTGGGAAAAGCAAAAGGATATaGGCTCTTGGTACAAAGCACACACTAAATTACACCTTTAGCATT +
Preference number: 6 (lower is better)
Translates to: SIHSWQITIGKSKRI*ALGTKHTLNYTFSI
Trigger: AATGCTAAAGGTGTAATTTAGTGTGTGCTTTGTACCAAGAGCCAATATCCTTTTGCTTTTCCCAATTGTTATTTGCCAGCTGTGTATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480029.5
CDS CAA 90 bp CATCAGAATCTGACTGAGGAGGTTCAAATCGACTTAATCTGCCTTTaGTTTTATGTCTCTCATCACGTTCCTCTTGAATTTGCTTTAATT +
Preference number: 6 (lower is better)
Translates to: HQNLTEEVQIDLICL*FYVSHHVPLEFALI
Trigger: AATTAAAGCAAATTCAAGAGGAACGTGATGAGAGACATAAAACAAAAGGCAGATTAAGTCGATTTGAACCTCCTCAGTCAGATTCTGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461591.5
ENST00000463563.6
ENST00000470400.5
ENST00000473835.7
ENST00000488497.7
ENST00000488587.1
ENST00000493598.6
CDS TCA 72 bp AACAAGAGATTGATATGCCTGTACACTATCAATCAATaGAGAAATTATGTTGCCAAAGCCTTAAGTGAATGG +
Preference number: 6 (lower is better)
Translates to: NKRLICLYTINQ*RNYVAKALSEW
Trigger: CCATTCACTTAAGGCTTTGGCAACATAATTTCTTCATTGATTGATAGTGTACAGGCATATCAATCTCTTGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480029.5