Pregenerated sensors for U1 (Homo sapiens)
Ensembl gene IDs: ENSG00000262656, ENSG00000263871, ENSG00000263971, ENSG00000264389, ENSG00000264704, ENSG00000264909, ENSG00000264960, ENSG00000265248, ENSG00000265983, ENSG00000266081, ENSG00000266689, ENSG00000266884, ENSG00000273516, ENSG00000273636, ENSG00000275205, ENSG00000275987, ENSG00000277374Ensembl transcript IDs: ENST00000572849.1, ENST00000577618.1, ENST00000577825.1, ENST00000578081.1, ENST00000578102.1, ENST00000578508.1, ENST00000579513.1, ENST00000579987.1, ENST00000580213.1, ENST00000580281.1, ENST00000580475.1, ENST00000581325.1, ENST00000581688.1, ENST00000582199.1, ENST00000582426.1, ENST00000583575.1, ENST00000583936.1, ENST00000584018.1, ENST00000584937.1, ENST00000610293.1, ENST00000610702.1, ENST00000612925.1, ENST00000618083.1, ENST00000619058.1, ENST00000620684.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGTTTCCCACATGGAGGAAATCACAGGAATCAGCAACTCTAGAGTaGGATGAAGAAGCTTCACTCTGGGAGAACCCCCTTCGTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: PFPTWRKSQESATLE*DEEASLWENPLRDH Trigger: GTGGTCACGAAGGGGGTTCTCCCAGAGTGAAGCTTCTTCATCGCACTCTAGAGTTGCTGATTCCTGTGATTTCCTCCATGTGGGAAACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618083.1 |
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| CDS TCA 90 bp | TTTGGGGAAATCACAGTGGTAAGCACACCTATGGAGTGCAATGGATaGGCCTCAGCCTGGGAAAACCACCTTCATGATCATGGCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: FGEITVVSTPMECNG*ASAWENHLHDHGIS Trigger: GGAGATGCCATGATCATGAAGGTGGTTTTCCCAGGCTGAGGCTCATCCATTGCACTCCATAGGTGTGCTTACCACTGTGATTTCCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619058.1 |
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| CDS GCA 90 bp | CCGTTTCCCACATTGAAGAAATCACAGAGATCAGCAACTCTAGAGTaGGATGAAGAAGCTTCACTCTGGGAGAACCCCCTTCGTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: PFPTLKKSQRSATLE*DEEASLWENPLRDH Trigger: GTGGTCACGAAGGGGGTTCTCCCAGAGTGAAGCTTCTTCATCGCACTCTAGAGTTGCTGATCTCTGTGATTTCTTCAATGTGGGAAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610293.1 |
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| CDS CCA 72 bp | GCGCAGCCTCTTCTAGCACAAACACCGTTTCCCACATaGAGGAAATCACAGGAATCAGCAACTCTAGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: AQPLLAQTPFPT*RKSQESATLEC Trigger: GCACTCTAGAGTTGCTGATTCCTGTGATTTCCTCCATGTGGGAAACGGTGTTTGTGCTAGAAGAGGCTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618083.1 |
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| CDS TCA 72 bp | ACATTTGGGGCAATTCCAGGGATCAGCATATCCCTATaGTGGATCCAGAGTGGAATGGATAAGCCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TFGAIPGISISL*WIQSGMDKPCP Trigger: AGGGCAAGGCTTATCCATTCCACTCTGGATCCATCATAGGGATATGCTGATCCCTGGAATTGCCCCAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612925.1 ENST00000620684.1 |
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| CDS GCA 72 bp | ACATGGAGGAAATCACAGGAATCAGCAACTCTAGAGTaGGATGAAGAAGCTTCACTCTGGGAGAACCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TWRKSQESATLE*DEEASLWENPL Trigger: AAGGGGGTTCTCCCAGAGTGAAGCTTCTTCATCGCACTCTAGAGTTGCTGATTCCTGTGATTTCCTCCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618083.1 |
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| CDS CCA 72 bp | TCTGACATTTGGGGAAATCATAGGGGTCAGCACATCTaGAGTATAACGGATAAGCCTCGCCTTGGGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SDIWGNHRGQHI*SITDKPRLGKA Trigger: AGCTTTCCCAAGGCGAGGCTTATCCGTTATACTCCAGATGTGCTGACCCCTATGATTTCCCCAAATGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610702.1 |
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| CDS CAA 72 bp | CGCAGCCCTCTTCTAGCACAAACACCGTTTCCCACATaGAAGAAATCACAGAGATCAGCAACTCTAGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RSPLLAQTPFPT*KKSQRSATLEC Trigger: GCACTCTAGAGTTGCTGATCTCTGTGATTTCTTCAATGTGGGAAACGGTGTTTGTGCTAGAAGAGGGCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610293.1 |
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| CDS CCA 72 bp | TCTCATCATCTGGAGTGCAAGGATCGAAACTTGCCTTaGGAAAACTACCCTCATGTTCATGGTATCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SHHLECKDRNLP*ENYPHVHGISP Trigger: AGGGGAGATACCATGAACATGAGGGTAGTTTTCCCAAGGCAAGTTTCGATCCTTGCACTCCAGATGATGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000582426.1 |
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| CDS CAA 72 bp | GTCTCATCATCCAGACTGCATGGGTTGAAACTTGCCTaGGGAAAACTATCCTCATGTTCATGGTATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VSSSRLHGLKLA*GKLSSCSWYLP Trigger: GGGGAGATACCATGAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAACCCATGCAGTCTGGATGATGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577618.1 |
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| CDS CAA 72 bp | CCACTACAACAAATTATGCAGTCGAGTTTTCCACATTaGGGAATATCACAGGGGTCAGCACATCCGGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: PLQQIMQSSFPH*GISQGSAHPEC Trigger: GCACTCCGGATGTGCTGACCCCTGTGATATTCCCAAATGTGGAAAACTCGACTGCATAATTTGTTGTAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572849.1 |
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| CDS CAA 90 bp | GTGAAGTCGGTGTTTCCACAGTATCCATCACCCAAATCACATGCATaGTATCCATTAAGTAATGTCTCATCATCCGGAGTGCAAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VKSVFPQYPSPKSHA*YPLSNVSSSGVQGW Trigger: CCACCCTTGCACTCCGGATGATGAGACATTACTTAATGGATACAATGCATGTGATTTGGGTGATGGATACTGTGGAAACACCGACTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580213.1 ENST00000580281.1 |
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| CDS GCA 72 bp | GAAAGCGCGAATGCAGTCCCCCACTACAACAAATTATaGAGTCGAGTTTTCCACATTTGGGAATATCACAGG | + |
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Preference number: 6 (lower is better) Translates to: ESANAVPHYNKL*SRVFHIWEYHR Trigger: CCTGTGATATTCCCAAATGTGGAAAACTCGACTGCATAATTTGTTGTAGTGGGGGACTGCATTCGCGCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000572849.1 |
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| CDS CAA 72 bp | GTCTCATCATCCAGAGTGCATGGGTTGAAACTTGCCTaGGGAAAACTATCCTCATGTTTATGGTATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VSSSRVHGLKLA*GKLSSCLWYLP Trigger: GGGGAGATACCATAAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAACCCATGCACTCTGGATGATGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578081.1 ENST00000579987.1 |
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| CDS CAA 72 bp | CTCTCATCATCTAGAGTGCAAGGGTTGAAACTTGCCTaGGGAAAACTACCCTCATGTTCATGGTATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSSSRVQGLKLA*GKLPSCSWYLL Trigger: GAGGAGATACCATGAACATGAGGGTAGTTTTCCCAAGGCAAGTTTCAACCCTTGCACTCTAGATGATGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577825.1 ENST00000578508.1 ENST00000580475.1 ENST00000583575.1 |
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| CDS CAA 72 bp | ATCTCATCATCTAGAGTGCAAGGGTTGAAACTTGCCTaGGGAAAACTATCCTCATGTTCATGGTGTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ISSSRVQGLKLA*GKLSSCSWCLP Trigger: GGGGAGACACCATGAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAACCCTTGCACTCTAGATGATGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581688.1 |
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| CDS CCA 72 bp | ACATGCATTGTACCCGTTAAGCAATCTCTCATCACCTaGAGTGCAAGGGTTGAAACTTGCCTTGGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: TCIVPVKQSLIT*SARVETCLGKI Trigger: AATTTTCCCAAGGCAAGTTTCAACCCTTGCACTCCAGGTGATGAGAGATTGCTTAACGGGTACAATGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578102.1 ENST00000582199.1 ENST00000584018.1 |
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| CDS CCA 72 bp | CACTACCAAAAATTTTGCAGTAGAGCTTCCCACATTTaGGGCAATTCCAGGGATCAGCATATCCCTATGATG | + |
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Preference number: 6 (lower is better) Translates to: HYQKFCSRASHI*GNSRDQHIPMM Trigger: CATCATAGGGATATGCTGATCCCTGGAATTGCCCCAAATGTGGGAAGCTCTACTGCAAAATTTTTGGTAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000612925.1 ENST00000620684.1 |
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| CDS CAA 72 bp | CCGTTAAGCAATCTCTCATCACCTGGAGTGCAAGGGTaGAAACTTGCCTTGGGAAAATTACCCTCATGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PLSNLSSPGVQG*KLALGKLPSCL Trigger: TAAACATGAGGGTAATTTTCCCAAGGCAAGTTTCAACCCTTGCACTCCAGGTGATGAGAGATTGCTTAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000578102.1 ENST00000582199.1 ENST00000584018.1 |
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| CDS CAA 90 bp | GTGAAGTTAGTGTTTCTACAGTATCCACCACCCAAATCACATGCATaGTCCCCATTAAGTAATGTCTCATCATCCAGAGTGCATGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VKLVFLQYPPPKSHA*SPLSNVSSSRVHGL Trigger: CAACCCATGCACTCTGGATGATGAGACATTACTTAATGGGGACAATGCATGTGATTTGGGTGGTGGATACTGTAGAAACACTAACTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578081.1 ENST00000579987.1 |
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| CDS CAA 90 bp | GCACTGTACCCATTAAGTAATCTCTCATCATCCGCAGTGCAAGCATaGAAACTTGCCTTGGGAAAACTATCCTCATGTTCATGGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: ALYPLSNLSSSAVQA*KLALGKLSSCSWYL Trigger: GAGATACCATGAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAATGCTTGCACTGCGGATGATGAGAGATTACTTAATGGGTACAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000579513.1 ENST00000581325.1 |
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| CDS CAA 90 bp | GTGAAGTTAGTGTTTCTACAGTATCCACCACCCAAATCACATGCATaGTCCCCATTAAGTAATGTCTCATCATCCAGACTGCATGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VKLVFLQYPPPKSHA*SPLSNVSSSRLHGL Trigger: CAACCCATGCAGTCTGGATGATGAGACATTACTTAATGGGGACAATGCATGTGATTTGGGTGGTGGATACTGTAGAAACACTAACTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577618.1 |
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| CDS CAA 90 bp | GCATTGTCCCCATTAAGTAATGTCTCATCATCTGGAGTGCAAGGATaGAAACTTGCCTTGGGAAAACTACCCTCATGTTCATGGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: ALSPLSNVSSSGVQG*KLALGKLPSCSWYL Trigger: GAGATACCATGAACATGAGGGTAGTTTTCCCAAGGCAAGTTTCAATCCTTGCACTCCAGATGATGAGACATTACTTAATGGGGACAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583936.1 |
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| CDS CAA 90 bp | GCATTGTACCCATTAAGTAATCTCTCATCATCCGCAGTGCAAGCGTaGAAACTTGCCTTGGGAAAACTATCCTCATGTTCATGGTATCTC | + |
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Preference number: 6 (lower is better) Translates to: ALYPLSNLSSSAVQA*KLALGKLSSCSWYL Trigger: GAGATACCATGAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAACGCTTGCACTGCGGATGATGAGAGATTACTTAATGGGTACAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584937.1 |
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| CDS CAA 72 bp | GTGTTTCTACAGTATCCACCACCCAAATCACATGCATaGTCCCCATTAAGTAATGTCTCATCATCCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VFLQYPPPKSHA*SPLSNVSSSRV Trigger: CACTCTGGATGATGAGACATTACTTAATGGGGACAATGCATGTGATTTGGGTGGTGGATACTGTAGAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578081.1 ENST00000579987.1 |
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| CDS CAA 72 bp | GTGTTTCTACAGTATCCACCACCCAAATCACATGCATaGTCCCCATTAAGTAATGTCTCATCATCCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: VFLQYPPPKSHA*SPLSNVSSSRL Trigger: CAGTCTGGATGATGAGACATTACTTAATGGGGACAATGCATGTGATTTGGGTGGTGGATACTGTAGAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577618.1 |
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| CDS CAA 72 bp | CCATTAAGTAATCTCTCATCATCCGCAGTGCAAGCGTaGAAACTTGCCTTGGGAAAACTATCCTCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLSNLSSSAVQA*KLALGKLSSCS Trigger: TGAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAACGCTTGCACTGCGGATGATGAGAGATTACTTAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584937.1 |
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| CDS CAA 72 bp | GTGTTTCCACAGTATCCATCACCCAAATCACATGCATaGTATCCATTAAGTAATGTCTCATCATCCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VFPQYPSPKSHA*YPLSNVSSSGV Trigger: CACTCCGGATGATGAGACATTACTTAATGGATACAATGCATGTGATTTGGGTGATGGATACTGTGGAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580213.1 ENST00000580281.1 |
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| CDS CAA 72 bp | CCATTAAGTAATCTCTCATCATCTAGAGTGCAAGGGTaGAAACTTGCCTTGGGAAAACTACCCTCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLSNLSSSRVQG*KLALGKLPSCS Trigger: TGAACATGAGGGTAGTTTTCCCAAGGCAAGTTTCAACCCTTGCACTCTAGATGATGAGAGATTACTTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577825.1 ENST00000578508.1 ENST00000580475.1 ENST00000583575.1 |
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| CDS CAA 72 bp | CCATTAAGTAATGTCTCATCATCTGGAGTGCAAGGATaGAAACTTGCCTTGGGAAAACTACCCTCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLSNVSSSGVQG*KLALGKLPSCS Trigger: TGAACATGAGGGTAGTTTTCCCAAGGCAAGTTTCAATCCTTGCACTCCAGATGATGAGACATTACTTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583936.1 |
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| CDS CAA 90 bp | GTGACATCAGTGTTTCTACAGTATCCATCACCCAAATCACATGCATaGTACCCATTAAGTAATCTCTCATCATCTAGAGTGCAAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VTSVFLQYPSPKSHA*YPLSNLSSSRVQGL Trigger: CAACCCTTGCACTCTAGATGATGAGAGATTACTTAATGGGTACAATGCATGTGATTTGGGTGATGGATACTGTAGAAACACTGATGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000580475.1 ENST00000583575.1 |
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| CDS CAA 72 bp | CCATTAAGTAATGTCTCATCATCCAGAGTGCATGGGTaGAAACTTGCCTTGGGAAAACTATCCTCATGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PLSNVSSSRVHG*KLALGKLSSCL Trigger: TAAACATGAGGATAGTTTTCCCAAGGCAAGTTTCAACCCATGCACTCTGGATGATGAGACATTACTTAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000578081.1 ENST00000579987.1 |
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