RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TYW3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162623

Ensembl transcript IDs: ENST00000370867.8, ENST00000449696.3, ENST00000457880.6, ENST00000479111.5, ENST00000483990.1, ENST00000485401.5, ENST00000486467.1

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGTCCACCAGACTAGAAGAAATGCTCCAGGCATTCCGACACTGTaGGTTCCCTTTCCTGCCCAAATTTCCTTCCCAGAAGGACTGCTG +
Preference number: 1 (lower is better)
Translates to: SVHQTRRNAPGIPTL*VPFPAQISFPEGLL
Trigger: CAGCAGTCCTTCTGGGAAGGAAATTTGGGCAGGAAAGGGAACTCACAGTGTCGGAATGCCTGGAGCATTTCTTCTAGTCTGGTGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 90 bp CATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTTaGCTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTATTCCC +
Preference number: 1 (lower is better)
Translates to: HARLERPFTVGHQLP*LASHAVFQPFWTIP
Trigger: GGGAATAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 90 bp GGGGAATGTTCCCTCCCAAGTGGTACAGAGTTCAACTTACATAGCTaGACGAGTTGCCATGCTTTCCTGGAAACTGCCTTAGACCCAATG +
Preference number: 1 (lower is better)
Translates to: GECSLPSGTEFNLHS*TSCHAFLETALDPM
Trigger: CATTGGGTCTAAGGCAGTTTCCAGGAAAGCATGGCAACTCGTTCAGCTATGTAAGTTGAACTCTGTACCACTTGGGAGGGAACATTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 90 bp ATAACTTACCTAAGCTCTTGCTTATTCTCCTATAAAGTGTACACATaGAATCCCTGGCACAGGTACACTGCAACATCTGTTCATGTGACC +
Preference number: 1 (lower is better)
Translates to: ITYLSSCLFSYKVYT*NPWHRYTATSVHVT
Trigger: GGTCACATGAACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 90 bp TTTTTCCCATCATGTGAACTTGTATCTTGTCCTTTTAGTCCTAAATaGAATGGTATCTCCTTGAACTGGAATTCCAGTACTTCCTCACCT +
Preference number: 1 (lower is better)
Translates to: FFPSCELVSCPFSPK*NGISLNWNSSTSSP
Trigger: AGGTGAGGAAGTACTGGAATTCCAGTTCAAGGAGATACCATTTCATTTAGGACTAAAAGGACAAGATACAAGTTCACATGATGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR GCA 90 bp CCATACTTTTATATGACTGTCACCACAAACGTGGGTAATGTGTTGTaGTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTT +
Preference number: 1 (lower is better)
Translates to: PYFYMTVTTNVGNVL*YSFTMTTSLAIGIF
Trigger: AAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAACACATTACCCACGTTTGTGGTGACAGTCATATAAAAGTATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 90 bp AAATGTTATGTAGCTCATGAATGTATATTAAGGAATGTTAAGGAGTaGATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGT +
Preference number: 1 (lower is better)
Translates to: KCYVAHECILRNVKE*MGFNVFLGLWPAPG
Trigger: ACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCACTCCTTAACATTCCTTAATATACATTCATGAGCTACATAACATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp CAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGTCTTCTTAGGTTTATaGCCAGCACCTGGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: QGQNPQYHCLPPPHLVPLVFLGL*PAPGVS
Trigger: GGAGACACCAGGTGCTGGCCATAAACCTAAGAAGAC...CAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACAGCTTAGATGACAACTaGACATCCTCTGGGCAACAA +
Preference number: 2 (lower is better)
Translates to: SLSLHRVRILSITVFLLHSLDDN*TSSGQQ
Trigger: TTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCT...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp CAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGTGAGTTCCCTTTCCTaGCCAAATTTCCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: QGQNPQYHCLPPPHLVPLVSSLS*PNFLPR
Trigger: TCTGGGAAGGAAATTTGGGCAGGAAAGGGAACTCAC...CAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACCCAGGATTAAGATTCTaGTTTGGAAGATCTGCGGCA +
Preference number: 2 (lower is better)
Translates to: SLSLHRVRILSITVFLLHPGLRF*FGRSAA
Trigger: TGCCGCAGATCTTCCAAACCAGAATCTTAATCCTGG...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CAA 90 bp CCCTTTCCTGCCCAAATTTCCTTCCCAGAAGGACTGCTGTATATGTaGGTAGATAAGAATGTGCACTGCACAACTTCGAGTGCCACTGAC +
Preference number: 2 (lower is better)
Translates to: PFPAQISFPEGLLYM*VDKNVHCTTSSATD
Trigger: GTCAGTGGCACTCGAAGTTGTGCAGTGCACATTCTTATCTACCAACATATACAGCAGTCCTTCTGGGAAGGAAATTTGGGCAGGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCGGGCATCAACTACCTTaGCTCGCATCACATGCTGTG +
Preference number: 2 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSGHQLP*LASHAV
Trigger: CACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCC...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCCTGAACGAGTTGCCATaGTTTCCTGGAAACTGCCTT +
Preference number: 2 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLLNELP*FPGNCL
Trigger: AAGGCAGTTTCCAGGAAAGCATGGCAACTCGTTCAG...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCAGCTTAGATGACAACTaGACATCCTCTGGGCAACAA +
Preference number: 2 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLSLDDN*TSSGQQ
Trigger: TTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCT...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACTCTCTTTTCATTTACTaGACTGCCAGGCAGATACTT +
Preference number: 2 (lower is better)
Translates to: SLSLHRVRILSITVFLLHSLFIY*TARQIL
Trigger: AAGTATCTGCCTGGCAGTGCAGTAAATGAAAAGAGA...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTGGTATCTCCTTGAACTaGAATTCCAGTACTTCCTCA +
Preference number: 2 (lower is better)
Translates to: VYLHARLERPFTVGHQLPGISLN*NSSTSS
Trigger: TGAGGAAGTACTGGAATTCCAGTTCAAGGAGATACC...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCACGGCCCTTCACAGTTaGGCATCAACTACCTTGACT +
Preference number: 2 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSTALHS*ASTTLT
Trigger: AGTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGT...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCAGTCATTACTGGCTTATaGATGGCTGATACACTCAAC +
Preference number: 2 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSVITGL*MADTLN
Trigger: GTTGAGTGTATCAGCCATTCATAAGCCAGTAATGAC...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCACTGCGAGAGGTTTTCTaGTTTTTCCCATCATGTGAA +
Preference number: 2 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSLREVF*FFPSCE
Trigger: TTCACATGATGGGAAAAATCAGAAAACCTCTCGCAG...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCATTCAACTTACATAGCTaGACGAGTTGCCATGCTTTC +
Preference number: 2 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSFNLHS*TSCHAF
Trigger: GAAAGCATGGCAACTCGTTCAGCTATGTAAGTTGAA...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTGGCATTCCGACACTGTaGGTTCCCTTTCCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGGIPTL*VPFPAQ
Trigger: TTGGGCAGGAAAGGGAACTCACAGTGTCGGAATGCC...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACTCACTGACTATACCATaGTTTTTGATGCCTCATATC +
Preference number: 2 (lower is better)
Translates to: SLSLHRVRILSITVFLLHSLTIP*FLMPHI
Trigger: GATATGAGGCATCAAAAAGCATGGTATAGTCAGTGA...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCCTGGCACAGGTACACTaGAACATCTGTTCATGTGAC +
Preference number: 2 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSLAQVH*NICSCD
Trigger: GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAG...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp AGTGTACACATGAAATCCCTGGCACAGGTACACTGCAACATCTGTTCATGTGACGGTATCTCCTTGAACTaGAATTCCAGTACTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SVHMKSLAQVHCNICSCDGISLN*NSSTSS
Trigger: TGAGGAAGTACTGGAATTCCAGTTCAAGGAGATACC...GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCCCAGGATTAAGATTCTaGTTTGGAAGATCTGCGGCA +
Preference number: 2 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSPGLRF*FGRSAA
Trigger: TGCCGCAGATCTTCCAAACCAGAATCTTAATCCTGG...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTACCTTTTAGTCCTAAATaGAATGGTATCTCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLPFSPK*NGISLN
Trigger: GTTCAAGGAGATACCATTTCATTTAGGACTAAAAGG...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp CTTCCTGAAGGACCTGTCAGAAGCTGTTTTACAGTTAACATTTTAAGTAGTATAGGCATTCCGACACTGTaGGTTCCCTTTCCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: LPEGPVRSCFTVNILSSIGIPTL*VPFPAQ
Trigger: TTGGGCAGGAAAGGGAACTCACAGTGTCGGAATGCC...TATACTACTTAAAATGTTAACTGTAAAACAGCTTCTGACAGGTCCTTCAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCTTACTGGCTTATGAATaGCTGATACACTCAACAAAC +
Preference number: 2 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLLLAYE*LIHSTN
Trigger: GTTTGTTGAGTGTATCAGCCATTCATAAGCCAGTAA...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CAA 90 bp TCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTTaGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: SAFLDYSPSLTIPCF*MPHIHYIPFVCERF
Trigger: AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATTGGCTTATGAATGGCTaGTACACTCAACAAACTAAA +
Preference number: 2 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYWLMNG*YTQQTK
Trigger: TTTAGTTTGTTGAGTGTATCAGCCATTCATAAGCCA...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
3UTR-3UTR TCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTGAAATGGTATCTCCTTaGACTGGAATTCCAGTACTT +
Preference number: 2 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFEMVSP*TGIPVL
Trigger: AAGTACTGGAATTCCAGTTCAAGGAGATACCATTTC...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCATATATACCCTTTGTCTaGGAGAGGTTTTCTGATTTT +
Preference number: 2 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSYIPFV*ERFSDF
Trigger: AAAATCAGAAAACCTCTCGCAGACAAAGGGTATATA...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCACTTACCTAAGCTCTTaGTTATTCTCCTATAAAGTG +
Preference number: 2 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLTYLSS*LFSYKV
Trigger: CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGT...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCTCTCTTTTCATTTACTaGACTGCCAGGCAGATACTT +
Preference number: 2 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSSLFIY*TARQIL
Trigger: AAGTATCTGCCTGGCAGTGCAGTAAATGAAAAGAGA...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCTCACTGACTATACCATaGTTTTTGATGCCTCATATC +
Preference number: 2 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSSLTIP*FLMPHI
Trigger: GATATGAGGCATCAAAAAGCATGGTATAGTCAGTGA...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTTGCTTTCCTGGAAACTaGCTTAGACCCAATGGTAAG +
Preference number: 2 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGCFPGN*LRPNGK
Trigger: CTTACCATTGGGTCTAAGGCAGTTTCCAGGAAAGCA...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGGTCATTACTGGCTTATaGATGGCTGATACACTCAAC +
Preference number: 2 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLVITGL*MADTLN
Trigger: GTTGAGTGTATCAGCCATTCATAAGCCAGTAATGAC...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTCTGCGAGAGGTTTTCTaGTTTTTCCCATCATGTGAA +
Preference number: 2 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGLREVF*FFPSCE
Trigger: TTCACATGATGGGAAAAATCAGAAAACCTCTCGCAG...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTTGGCTTATGAATGGCTaGTACACTCAACAAACTAAA +
Preference number: 2 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFWLMNG*YTQQTK
Trigger: TTTAGTTTGTTGAGTGTATCAGCCATTCATAAGCCA...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CCA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTTTACTGGCTTATGAATaGCTGATACACTCAACAAAC +
Preference number: 2 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFLLAYE*LIHSTN
Trigger: GTTTGTTGAGTGTATCAGCCATTCATAAGCCAGTAA...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGTGGCTTATGAATGGCTaGTACACTCAACAAACTAAA +
Preference number: 2 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLWLMNG*YTQQTK
Trigger: TTTAGTTTGTTGAGTGTATCAGCCATTCATAAGCCA...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGTATAGTTTGAAGCTCTaGACTTGTCATTACTGGCTT +
Preference number: 2 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLYSLKL*TCHYWL
Trigger: AAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATA...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR GCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTTATAGTTTGAAGCTCTaGACTTGTCATTACTGGCTT +
Preference number: 2 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGYSLKL*TCHYWL
Trigger: AAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATA...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATGAAATGGTATCTCCTTaGACTGGAATTCCAGTACTT +
Preference number: 2 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDEMVSP*TGIPVL
Trigger: AAGTACTGGAATTCCAGTTCAAGGAGATACCATTTC...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR TCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATCCTTTTAGTCCTAAATaGAATGGTATCTCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDPFSPK*NGISLN
Trigger: GTTCAAGGAGATACCATTTCATTTAGGACTAAAAGG...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp CAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGTGGGCATCAACTACCTaGACTCGCATCACATGCTGT +
Preference number: 3 (lower is better)
Translates to: QGQNPQYHCLPPPHLVPLWASTT*TRITCC
Trigger: ACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCCA...CAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 72 bp TTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTTaGCTCGCATCACATGCTGTGTTTCAGCCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: LERPFTVGHQLP*LASHAVFQPFW
Trigger: CCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACAAACGGCCCTTCACAGTaGGGCATCAACTACCTTGAC +
Preference number: 3 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTNGPSQ*GINYLD
Trigger: GTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGTT...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 72 bp TCCCTCCCAAGTGGTACAGAGTTCAACTTACATAGCTaGACGAGTTGCCATGCTTTCCTGGAAACTGCCTTA +
Preference number: 3 (lower is better)
Translates to: SLPSGTEFNLHS*TSCHAFLETAL
Trigger: TAAGGCAGTTTCCAGGAAAGCATGGCAACTCGTTCAGCTATGTAAGTTGAACTCTGTACCACTTGGGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CCA 72 bp AGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTaGAAGGTCTTCAGGGGCAATAACACACATGAAGCT +
Preference number: 3 (lower is better)
Translates to: SITVFLLHILYH*KVFRGNNTHEA
Trigger: AGCTTCATGTGTGTTATTGCCCCTGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp AGTGTACACATGAAATCCCTGGCACAGGTACACTGCAACATCTGTTCATGTGACTTTGAAGCTCTGCACTaGTCATTACTGGCTTATGAA +
Preference number: 3 (lower is better)
Translates to: SVHMKSLAQVHCNICSCDFEALH*SLLAYE
Trigger: TTCATAAGCCAGTAATGACAAGTGCAGAGCTTCAAA...GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTACAACAAAGTTATAGTTaGAAGCTCTGCACTTGTCAT +
Preference number: 3 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLQQSYS*KLCTCH
Trigger: ATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTG...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 72 bp CTAAGCTCTTGCTTATTCTCCTATAAAGTGTACACATaGAATCCCTGGCACAGGTACACTGCAACATCTGTT +
Preference number: 3 (lower is better)
Translates to: LSSCLFSYKVYT*NPWHRYTATSV
Trigger: AACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATTTGAAGCTCTGCACTaGTCATTACTGGCTTATGAA +
Preference number: 3 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTFEALH*SLLAYE
Trigger: TTCATAAGCCAGTAATGACAAGTGCAGAGCTTCAAA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATCCCATCATGTGAACTaGTATCTTGTCCTTTTAGTC +
Preference number: 3 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTSHHVN*YLVLLV
Trigger: GACTAAAAGGACAAGATACAAGTTCACATGATGGGA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp CCAATGGTAAGGACTATAACTTACCTAAGCTCTTGCTTATTCTCCTATAAAGTGTCCATTATATACCCTTaGTCTGCGAGAGGTTTTCTG +
Preference number: 3 (lower is better)
Translates to: PMVRTITYLSSCLFSYKVSIIYP*SARGFL
Trigger: CAGAAAACCTCTCGCAGACAAAGGGTATATAATGGA...CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGTTATAGTCCTTACCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR-3UTR CAA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGCAACAAAGTTATAGTTaGAAGCTCTGCACTTGTCAT +
Preference number: 3 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLQQSYS*KLCTCH
Trigger: ATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTG...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 72 bp TATCCATTATATACCCTTTGTCTGCGAGAGGTTTTCTaGTTTTTCCCATCATGTGAACTTGTATCTTGTCCT +
Preference number: 3 (lower is better)
Translates to: YPLYTLCLREVF*FFPSCELVSCP
Trigger: AGGACAAGATACAAGTTCACATGATGGGAAAAATCAGAAAACCTCTCGCAGACAAAGGGTATATAATGGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR TCA 72 bp TCATGTGAACTTGTATCTTGTCCTTTTAGTCCTAAATaGAATGGTATCTCCTTGAACTGGAATTCCAGTACT +
Preference number: 3 (lower is better)
Translates to: SCELVSCPFSPK*NGISLNWNSST
Trigger: AGTACTGGAATTCCAGTTCAAGGAGATACCATTTCATTTAGGACTAAAAGGACAAGATACAAGTTCACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACTGGGGGCAGCCATATTaGAGCGAGCGGTGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: SLSLHRVRILSITVFLLHWGQPY*SERWPK
Trigger: TTTCGGCCACCGCTCGCTTCAATATGGCTGCCCCCA...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACGACGGACTCAGGGTCTaGGCTCGGCTCCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: SLSLHRVRILSITVFLLHDGLRV*ARLLHG
Trigger: ACCATGAAGGAGCCGAGCGCAGACCCTGAGTCCGTC...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp CAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGCCGCGCTGCGATCCATaGGTGACGGACTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QGQNPQYHCLPPPHLVPLPRCDP*VTDSGS
Trigger: AGACCCTGAGTCCGTCACCCATGGATCGCAGCGCGG...CAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCACACTGCCCTTCCGGCTaGGGTCCGCTTTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSHCPSG*GPLCSN
Trigger: GTTTGAGCAAAGCGGACCTCAGCCGGAAGGGCAGTG...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATGGTCAAGGAGTAGGATaGGGCCAGCGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYGQGVG*GQRRSW
Trigger: CCAGCTCCTGCGCTGGCCGCATCCTACTCCTTGACC...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCCCGCGCTGCGATCCATaGGTGACGGACTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSPRCDP*VTDSGS
Trigger: AGACCCTGAGTCCGTCACCCATGGATCGCAGCGCGG...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTGCTGCGATCCATGGGTaGCGGACTCAGGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFAAIHG*RTQGLR
Trigger: GCGCAGACCCTGAGTCCGTCACCCATGGATCGCAGC...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATGGGGGCAGCCATATTaGAGCGAGCGGTGGCCGAAA +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTWGQPY*SERWPK
Trigger: TTTCGGCCACCGCTCGCTTCAATATGGCTGCCCCCA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACACACTGCCCTTCCGGCTaGGGTCCGCTTTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTHCPSG*GPLCSN
Trigger: GTTTGAGCAAAGCGGACCTCAGCCGGAAGGGCAGTG...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTACGCAGGAGCTGGTGGTaGAAAACTGATCTCGCATGT +
Preference number: 4 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLRRSWW*KTDLAC
Trigger: ACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCG...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCGGGCATCAACTACCTTaGCTCGCATCACATGCTGTG +
Preference number: 4 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLGHQLP*LASHAV
Trigger: CACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCC...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CAA 72 bp AGAATGTGCACTGCACAACTTCGAGTGCCACTGACATaGTCATCTAGGGGAATGTTCCCTCCCAAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: RMCTAQLRVPLT*SSRGMFPPKWY
Trigger: GTACCACTTGGGAGGGAACATTCCCCTAGATGACAATGTCAGTGGCACTCGAAGTTGTGCAGTGCACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp CCAATGGTAAGGACTATAACTTACCTAAGCTCTTGCTTATTCTCCTATAAAGTGGCTGCGATCCATGGGTaGCGGACTCAGGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: PMVRTITYLSSCLFSYKVAAIHG*RTQGLR
Trigger: GCGCAGACCCTGAGTCCGTCACCCATGGATCGCAGC...CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGTTATAGTCCTTACCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGCACTGCCCTTCCGGCTaGGGTCCGCTTTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMHCPSG*GPLCSN
Trigger: GTTTGAGCAAAGCGGACCTCAGCCGGAAGGGCAGTG...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR GCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTGGTCAAGGAGTAGGATaGGGCCAGCGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGGQGVG*GQRRSW
Trigger: CCAGCTCCTGCGCTGGCCGCATCCTACTCCTTGACC...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CAA 72 bp ATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTaGACTCGCATCACATGCTGTGTTTCAGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IRTALHSWASTT*TRITCCVSAFL
Trigger: CAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGGCGCCTTCCATTTCCTaGACTCCGCGCTGCGATCCA +
Preference number: 4 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLAPSIS*TPRCDP
Trigger: TGGATCGCAGCGCGGAGTTCAGGAAATGGAAGGCGC...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGCGCAGGAGCTGGTGGTaGAAAACTGATCTCGCATGT +
Preference number: 4 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLRRSWW*KTDLAC
Trigger: ACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCG...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR GCA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTAGAATCTGTGCATCCTaGAATTGTCGACACTGCACA +
Preference number: 4 (lower is better)
Translates to: VYLHARLERPFTVGHQLPRICAS*NCRHCT
Trigger: TGTGCAGTGTCGACAATTGCAGGATGCACAGATTCT...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370867.8
CDS-3UTR CCA 90 bp AGTGTACACATGAAATCCCTGGCACAGGTACACTGCAACATCTGTTCATGTGACACGGCCCTTCACAGTTaGGCATCAACTACCTTGACT +
Preference number: 4 (lower is better)
Translates to: SVHMKSLAQVHCNICSCDTALHS*ASTTLT
Trigger: AGTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGT...GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTAATTAAGATTCTGGTTTaGAAGATCTGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLIKILV*KICGRA
Trigger: GGCCCTGCCGCAGATCTTCCAAACCAGAATCTTAAT...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCTTTATGGCCAGCACCTaGTGTCTCCTCTCTACTAAC +
Preference number: 4 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLFMAST*CLLSTN
Trigger: GTTAGTAGAGAGGAGACACCAGGTGCTGGCCATAAA...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCACTGGTGGTGAAAAACTaGTCTCGCATGTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSLVVKN*SRMFRN
Trigger: GTTTCTGAACATGCGAGATCAGTTTTTCACCACCAG...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTACTGGTGGTGAAAAACTaGTCTCGCATGTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLLVVKN*SRMFRN
Trigger: GTTTCTGAACATGCGAGATCAGTTTTTCACCACCAG...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGGGCATTCCGACACTGTaGGTTCCCTTTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMGIPTL*VPFPAQ
Trigger: TTGGGCAGGAAAGGGAACTCACAGTGTCGGAATGCC...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATCGCATGTTCAGAAACTaGACAAGCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYRMFRN*TSSTTS
Trigger: GGATGTGGTAGAGCTTGTGCAGTTTCTGAACATGCG...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR GCA 90 bp CTTCCTGAAGGACCTGTCAGAAGCTGTTTTACAGTTAACATTTTAAGTAGTATAGGTCAAGGAGTAGGATaGGGCCAGCGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEGPVRSCFTVNILSSIGQGVG*GQRRSW
Trigger: CCAGCTCCTGCGCTGGCCGCATCCTACTCCTTGACC...TATACTACTTAAAATGTTAACTGTAAAACAGCTTCTGACAGGTCCTTCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATCTGGCACAGGTACACTaGAACATCTGTTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYLAQVH*NICSCD
Trigger: GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAG...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTGTGGGTAATGTGTTGTaGTACAGCTTTACAATGACC +
Preference number: 4 (lower is better)
Translates to: VYLHARLERPFTVGHQLPVGNVL*YSFTMT
Trigger: GGTCATTGTAAAGCTGTAGCACAACACATTACCCAC...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTGTCTTCTTAGGTTTATaGCCAGCACCTGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFVFLGL*PAPGVS
Trigger: GGAGACACCAGGTGCTGGCCATAAACCTAAGAAGAC...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATCTGGTGGTGAAAAACTaGTCTCGCATGTTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYLVVKN*SRMFRN
Trigger: GTTTCTGAACATGCGAGATCAGTTTTTCACCACCAG...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR TCA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTGAAATGGTATCTCCTTaGACTGGAATTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: VYLHARLERPFTVGHQLPEMVSP*TGIPVL
Trigger: AAGTACTGGAATTCCAGTTCAAGGAGATACCATTTC...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp CAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAATGGTATCTCCTTaGACTGGAATTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: QGQNPQYHCLPPPHLVPLEMVSP*TGIPVL
Trigger: AAGTACTGGAATTCCAGTTCAAGGAGATACCATTTC...CAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCCTGCGAGAGGTTTTCTaGTTTTTCCCATCATGTGAA +
Preference number: 4 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLLREVF*FFPSCE
Trigger: TTCACATGATGGGAAAAATCAGAAAACCTCTCGCAG...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATGACGGACTCAGGGTCTaGGCTCGGCTCCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDDGLRV*ARLLHG
Trigger: ACCATGAAGGAGCCGAGCGCAGACCCTGAGTCCGTC...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCCGCATGTTCAGAAACTaGACAAGCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSRMFRN*TSSTTS
Trigger: GGATGTGGTAGAGCTTGTGCAGTTTCTGAACATGCG...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGAATCTGTGCATCCTaGAATTGTCGACACTGCACA +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYRICAS*NCRHCT
Trigger: TGTGCAGTGTCGACAATTGCAGGATGCACAGATTCT...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000479111.5
CDS-3UTR GCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATTGCTTTCCTGGAAACTaGCTTAGACCCAATGGTAAG +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYCFPGN*LRPNGK
Trigger: CTTACCATTGGGTCTAAGGCAGTTTCCAGGAAAGCA...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGCTGAACGAGTTGCCATaGTTTCCTGGAAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLLNELP*FPGNCL
Trigger: AAGGCAGTTTCCAGGAAAGCATGGCAACTCGTTCAG...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCATTAAGATTCTGGTTTaGAAGATCTGCGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSIKILV*KICGRA
Trigger: GGCCCTGCCGCAGATCTTCCAAACCAGAATCTTAAT...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTTTTATGGCCAGCACCTaGTGTCTCCTCTCTACTAAC +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFFMAST*CLLSTN
Trigger: GTTAGTAGAGAGGAGACACCAGGTGCTGGCCATAAA...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp AGTGTACACATGAAATCCCTGGCACAGGTACACTGCAACATCTGTTCATGTGACGTCATTACTGGCTTATaGATGGCTGATACACTCAAC +
Preference number: 4 (lower is better)
Translates to: SVHMKSLAQVHCNICSCDVITGL*MADTLN
Trigger: GTTGAGTGTATCAGCCATTCATAAGCCAGTAATGAC...GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGGGGCATCAACTACCTTaGCTCGCATCACATGCTGTG +
Preference number: 4 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLGHQLP*LASHAV
Trigger: CACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCC...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCGGAATGCAGAATCTGTaGATCCTGCAATTGTCGACA +
Preference number: 4 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSGMQNL*ILQLST
Trigger: TGTCGACAATTGCAGGATGCACAGATTCTGCATTCC...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370867.8
CDS-3UTR GCA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGGGAATGCAGAATCTGTaGATCCTGCAATTGTCGACA +
Preference number: 4 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLGMQNL*ILQLST
Trigger: TGTCGACAATTGCAGGATGCACAGATTCTGCATTCC...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000479111.5
CDS-3UTR GCA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTTATAGTTTGAAGCTCTaGACTTGTCATTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: VYLHARLERPFTVGHQLPYSLKL*TCHYWL
Trigger: AAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATA...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTAGCTTAGATGACAACTaGACATCCTCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFSLDDN*TSSGQQ
Trigger: TTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCT...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTTTACTGGCTTATGAATaGCTGATACACTCAACAAAC +
Preference number: 4 (lower is better)
Translates to: VYLHARLERPFTVGHQLPLLAYE*LIHSTN
Trigger: GTTTGTTGAGTGTATCAGCCATTCATAAGCCAGTAA...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATGGTATCTCCTTGAACTaGAATTCCAGTACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYGISLN*NSSTSS
Trigger: TGAGGAAGTACTGGAATTCCAGTTCAAGGAGATACC...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGCCAGGATTAAGATTCTaGTTTGGAAGATCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLPGLRF*FGRSAA
Trigger: TGCCGCAGATCTTCCAAACCAGAATCTTAATCCTGG...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTCTGTCACCACAAACGTaGGTAATGTGTTGTGCTACA +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFLSPQT*VMCCAT
Trigger: TGTAGCACAACACATTACCCACGTTTGTGGTGACAG...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATTGTCGACACTGCACATaGAGAACAAATGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYCRHCT*RTNGSN
Trigger: ATTTGAACCATTTGTTCTTCATGTGCAGTGTCGACA...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000479111.5
CDS-3UTR TCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTTTATGCCAGAGTTCCTaGAACCAGAATCTATTGCCA +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFLCQSS*NQNLLP
Trigger: TGGCAATAGATTCTGGTTTCAGGAACTCTGGCATAA...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GTGAATGGGATTCAATGTCTTCTTAGGTTTATGGCCAGCACCTGGTGTCTCCTCTGGCTTATGAATGGCTaGTACACTCAACAAACTAAA +
Preference number: 4 (lower is better)
Translates to: VNGIQCLLRFMASTWCLLWLMNG*YTQQTK
Trigger: TTTAGTTTGTTGAGTGTATCAGCCATTCATAAGCCA...GAGGAGACACCAGGTGCTGGCCATAAACCTAAGAAGACATTGAATCCCATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGCGCATGTTCAGAAACTaGACAAGCTCTACCACATCC +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMRMFRN*TSSTTS
Trigger: GGATGTGGTAGAGCTTGTGCAGTTTCTGAACATGCG...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR GCA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTGTGAGTTCCCTTTCCTaGCCAAATTTCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFVSSLS*PNFLPR
Trigger: TCTGGGAAGGAAATTTGGGCAGGAAAGGGAACTCAC...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGGTGGGTAATGTGTTGTaGTACAGCTTTACAATGACC +
Preference number: 4 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLVGNVL*YSFTMT
Trigger: GGTCATTGTAAAGCTGTAGCACAACACATTACCCAC...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCATTACTGGCTTATGAATaGCTGATACACTCAACAAAC +
Preference number: 4 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSLLAYE*LIHSTN
Trigger: GTTTGTTGAGTGTATCAGCCATTCATAAGCCAGTAA...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGACGGCCCTTCACAGTTaGGCATCAACTACCTTGACT +
Preference number: 4 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLTALHS*ASTTLT
Trigger: AGTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGT...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp CTTCCTGAAGGACCTGTCAGAAGCTGTTTTACAGTTAACATTTTAAGTAGTATACGCAGGAGCTGGTGGTaGAAAACTGATCTCGCATGT +
Preference number: 4 (lower is better)
Translates to: LPEGPVRSCFTVNILSSIRRSWW*KTDLAC
Trigger: ACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCG...TATACTACTTAAAATGTTAACTGTAAAACAGCTTCTGACAGGTCCTTCAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTCTAAAAGTGCTGGACTaGTTTTATCAGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFLKVLD*FYQNHL
Trigger: CAAGTGGTTCTGATAAAATCAGTCCAGCACTTTTAG...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATATAAAGTGTACACATaGAATCCCTGGCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTYKVYT*NPWHRY
Trigger: GTACCTGTGCCAGGGATTTCATGTGTACACTTTATA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTTACCATACTTTTATATaGCTGTCACCACAAACGTGG +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFYHTFI*LSPQTW
Trigger: CCACGTTTGTGGTGACAGTCATATAAAAGTATGGTA...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGAGCTTAGATGACAACTaGACATCCTCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMSLDDN*TSSGQQ
Trigger: TTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCT...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR GCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTCTGAACGAGTTGCCATaGTTTCCTGGAAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGLNELP*FPGNCL
Trigger: AAGGCAGTTTCCAGGAAAGCATGGCAACTCGTTCAG...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTATCCATTATAATCTTATaGGGCCACCATATCGTATAT +
Preference number: 4 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLSIIIL*GHHIVY
Trigger: ATATACGATATGGTGGCCCCATAAGATTATAATGGA...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCATCCATTATAATCTTATaGGGCCACCATATCGTATAT +
Preference number: 4 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSSIIIL*GHHIVY
Trigger: ATATACGATATGGTGGCCCCATAAGATTATAATGGA...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CAA 72 bp GACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTaGAAGCTCTGCACTTGTCATTACTGGCTTATGAAT +
Preference number: 4 (lower is better)
Translates to: DNCTSSGQQSYS*KLCTCHYWLMN
Trigger: ATTCATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
3UTR CAA 72 bp CTGGACTATTCCCCATCACTGACTATACCATGCTTTTaGATGCCTCATATCCATTATATACCCTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LDYSPSLTIPCF*MPHIHYIPFVC
Trigger: GCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATGTCGACACTGCACATaGAGAACAAATGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTCRHCT*RTNGSN
Trigger: ATTTGAACCATTTGTTCTTCATGTGCAGTGTCGACA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370867.8
CDS-3UTR TCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGTTATGCCAGAGTTCCTaGAACCAGAATCTATTGCCA +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMLCQSS*NQNLLP
Trigger: TGGCAATAGATTCTGGTTTCAGGAACTCTGGCATAA...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR TCA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTGTCATTACTGGCTTATaGATGGCTGATACACTCAAC +
Preference number: 4 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFVITGL*MADTLN
Trigger: GTTGAGTGTATCAGCCATTCATAAGCCAGTAATGAC...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGGTCATTACTGGCTTATaGATGGCTGATACACTCAAC +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMVITGL*MADTLN
Trigger: GTTGAGTGTATCAGCCATTCATAAGCCAGTAATGAC...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR TCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGTTCAACTTACATAGCTaGACGAGTTGCCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMFNLHS*TSCHAF
Trigger: GAAAGCATGGCAACTCGTTCAGCTATGTAAGTTGAA...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATACCATACTTTTATATaGCTGTCACCACAAACGTGG +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTYHTFI*LSPQTW
Trigger: CCACGTTTGTGGTGACAGTCATATAAAAGTATGGTA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATATCAGTTTTCCCTTATaGCTTAATGGAACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYISFPL*LNGTSK
Trigger: CTTAGAAGTTCCATTAAGCCATAAGGGAAAACTGAT...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGCCAGGATTAAGATTCTaGTTTGGAAGATCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLPGLRF*FGRSAA
Trigger: TGCCGCAGATCTTCCAAACCAGAATCTTAATCCTGG...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACACCTTTTAGTCCTAAATaGAATGGTATCTCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTPFSPK*NGISLN
Trigger: GTTCAAGGAGATACCATTTCATTTAGGACTAAAAGG...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp AGACACCATTCAAACATCTTTGATTTATTAAGCAGGTGCTTCTGGGAGAAACTGCTGCGAGAGGTTTTCTaGTTTTTCCCATCATGTGAA +
Preference number: 4 (lower is better)
Translates to: RHHSNIFDLLSRCFWEKLLREVF*FFPSCE
Trigger: TTCACATGATGGGAAAAATCAGAAAACCTCTCGCAG...CAGTTTCTCCCAGAAGCACCTGCTTAATAAATCAAAGATGTTTGAATGGTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGAGTGGCATCACCATTTaGTTTCTTCAGAGCTACAAT +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMSGITI*FLQSYN
Trigger: ATTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACT...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000479111.5
CDS-3UTR GCA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTTATATACCCTTTGTCTaGGAGAGGTTTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFYIPFV*ERFSDF
Trigger: AAAATCAGAAAACCTCTCGCAGACAAAGGGTATATA...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp CTTCCTGAAGGACCTGTCAGAAGCTGTTTTACAGTTAACATTTTAAGTAGTATACTGGCACAGGTACACTaGAACATCTGTTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: LPEGPVRSCFTVNILSSILAQVH*NICSCD
Trigger: GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAG...TATACTACTTAAAATGTTAACTGTAAAACAGCTTCTGACAGGTCCTTCAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATGTGAGTTCCCTTTCCTaGCCAAATTTCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDVSSLS*PNFLPR
Trigger: TCTGGGAAGGAAATTTGGGCAGGAAAGGGAACTCAC...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGTCTCTTTTCATTTACTaGACTGCCAGGCAGATACTT +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMSLFIY*TARQIL
Trigger: AAGTATCTGCCTGGCAGTGCAGTAAATGAAAAGAGA...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCATCAGTTTTCCCTTATaGCTTAATGGAACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSISFPL*LNGTSK
Trigger: CTTAGAAGTTCCATTAAGCCATAAGGGAAAACTGAT...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp CCAATGGTAAGGACTATAACTTACCTAAGCTCTTGCTTATTCTCCTATAAAGTGCTGTCACCACAAACGTaGGTAATGTGTTGTGCTACA +
Preference number: 4 (lower is better)
Translates to: PMVRTITYLSSCLFSYKVLSPQT*VMCCAT
Trigger: TGTAGCACAACACATTACCCACGTTTGTGGTGACAG...CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGTTATAGTCCTTACCATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
3UTR CAA 72 bp TTTTATATGACTGTCACCACAAACGTGGGTAATGTGTaGTGCTACAGCTTTACAATGACCACATCACTAGCA +
Preference number: 4 (lower is better)
Translates to: FYMTVTTNVGNV*CYSFTMTTSLA
Trigger: TGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAACACATTACCCACGTTTGTGGTGACAGTCATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGTATAGTTTGAAGCTCTaGACTTGTCATTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMYSLKL*TCHYWL
Trigger: AAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATA...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR GCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATAGCTTAGATGACAACTaGACATCCTCTGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDSLDDN*TSSGQQ
Trigger: TTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCT...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp GCTCTTGCTTATTCTCCTATAAAGTGTACACATGAAATCCCTGGCACAGGTACATATATACCCTTTGTCTaGGAGAGGTTTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: ALAYSPIKCTHEIPGTGTYIPFV*ERFSDF
Trigger: AAAATCAGAAAACCTCTCGCAGACAAAGGGTATATA...TGTACCTGTGCCAGGGATTTCATGTGTACACTTTATAGGAGAATAAGCAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGTTACTGGCTTATGAATaGCTGATACACTCAACAAAC +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMLLAYE*LIHSTN
Trigger: GTTTGTTGAGTGTATCAGCCATTCATAAGCCAGTAA...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR TCA 90 bp CTTCCTGAAGGACCTGTCAGAAGCTGTTTTACAGTTAACATTTTAAGTAGTATATTATGCCAGAGTTCCTaGAACCAGAATCTATTGCCA +
Preference number: 4 (lower is better)
Translates to: LPEGPVRSCFTVNILSSILCQSS*NQNLLP
Trigger: TGGCAATAGATTCTGGTTTCAGGAACTCTGGCATAA...TATACTACTTAAAATGTTAACTGTAAAACAGCTTCTGACAGGTCCTTCAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTTGGCTTATGAATGGCTaGTACACTCAACAAACTAAA +
Preference number: 4 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGWLMNG*YTQQTK
Trigger: TTTAGTTTGTTGAGTGTATCAGCCATTCATAAGCCA...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp CCAATGGTAAGGACTATAACTTACCTAAGCTCTTGCTTATTCTCCTATAAAGTGCTAAAAGTGCTGGACTaGTTTTATCAGAACCACTTG +
Preference number: 4 (lower is better)
Translates to: PMVRTITYLSSCLFSYKVLKVLD*FYQNHL
Trigger: CAAGTGGTTCTGATAAAATCAGTCCAGCACTTTTAG...CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGTTATAGTCCTTACCATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR TCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATTATAAAGTGTACACATaGAATCCCTGGCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDYKVYT*NPWHRY
Trigger: GTACCTGTGCCAGGGATTTCATGTGTACACTTTATA...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGACTTACCTAAGCTCTTaGTTATTCTCCTATAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMTYLSS*LFSYKV
Trigger: CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGT...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATGGTATCTCCTTGAACTaGAATTCCAGTACTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDGISLN*NSSTSS
Trigger: TGAGGAAGTACTGGAATTCCAGTTCAAGGAGATACC...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATAGTGGCATCACCATTTaGTTTCTTCAGAGCTACAAT +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDSGITI*FLQSYN
Trigger: ATTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACT...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370867.8
CDS-3UTR CCA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTCAGAATCTATTGCCATaGAATGCACATCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGQNLLP*NAHHLL
Trigger: TAAAAGATGATGTGCATTCCATGGCAATAGATTCTG...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457880.6
CDS-3UTR GCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATTATAGTTTGAAGCTCTaGACTTGTCATTACTGGCTT +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDYSLKL*TCHYWL
Trigger: AAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATA...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CCA 90 bp CCAATGGTAAGGACTATAACTTACCTAAGCTCTTGCTTATTCTCCTATAAAGTGATCAGTTTTCCCTTATaGCTTAATGGAACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: PMVRTITYLSSCLFSYKVISFPL*LNGTSK
Trigger: CTTAGAAGTTCCATTAAGCCATAAGGGAAAACTGAT...CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGTTATAGTCCTTACCATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR GCA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATACTTACCTAAGCTCTTaGTTATTCTCCTATAAAGTG +
Preference number: 4 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDTYLSS*LFSYKV
Trigger: CACTTTATAGGAGAATAAGCAAGAGCTTAGGTAAGT...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS GCA 90 bp TCGTCAACACTGCCCTTCCGGCTGAGGTCCGCTTTGCTCAAACATTaGGCCTTCCATTTCCTGAACTCCGCGCTGCGATCCATGGGTGAC +
Preference number: 5 (lower is better)
Translates to: SSTLPFRLRSALLKH*AFHFLNSALRSMGD
Trigger: GTCACCCATGGATCGCAGCGCGGAGTTCAGGAAATGGAAGGCGCAATGTTTGAGCAAAGCGGACCTCAGCCGGAAGGGCAGTGTTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACCTGGGGGCAGCCATATaGAAGCGAGCGGTGGCCGAA +
Preference number: 5 (lower is better)
Translates to: SLSLHRVRILSITVFLLHLGAAI*KRAVAE
Trigger: TTCGGCCACCGCTCGCTTCAATATGGCTGCCCCCAG...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS TCA 90 bp TACCCCGGTCAAGGAGTAGGATGCGGCCAGCGCAGGAGCTGGTGGTaGAAAACTGATCTCGCATGTTCAGAAACTGCACAAGCTCTACCA +
Preference number: 5 (lower is better)
Translates to: YPGQGVGCGQRRSWW*KTDLACSETAQALP
Trigger: TGGTAGAGCTTGTGCAGTTTCTGAACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCGCTGGCCGCATCCTACTCCTTGACCGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS TCA 90 bp GAACCCGGTCAAGGAGTAGGATGCGGCCAGCGCAGGAGCTGGTGGTaGAAAACTGATCTCGCATGTTCAGAAACTGCACAAGCTCTACCA +
Preference number: 5 (lower is better)
Translates to: EPGQGVGCGQRRSWW*KTDLACSETAQALP
Trigger: TGGTAGAGCTTGTGCAGTTTCTGAACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCGCTGGCCGCATCCTACTCCTTGACCGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479111.5
CDS TCA 90 bp TCAAGGAGTAGGATGCGGCCAGCGCAGGAGCTGGTGGTGAAAAACTaGTCTCGCATGTTCAGAAACTGCACAAGCTCTACCACATCCTCG +
Preference number: 5 (lower is better)
Translates to: SRSRMRPAQELVVKN*SRMFRNCTSSTTSS
Trigger: CGAGGATGTGGTAGAGCTTGTGCAGTTTCTGAACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCGCTGGCCGCATCCTACTCCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCACGGCTGAGGTCCGCTTaGCTCAAACATTGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSRLRSA*LKHCAF
Trigger: GAAGGCGCAATGTTTGAGCAAAGCGGACCTCAGCCG...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATCGGCTGAGGTCCGCTTaGCTCAAACATTGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYRLRSA*LKHCAF
Trigger: GAAGGCGCAATGTTTGAGCAAAGCGGACCTCAGCCG...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACCTGTGCATCCTGCAATaGTCGACACTGCACATGAAG +
Preference number: 5 (lower is better)
Translates to: SLSLHRVRILSITVFLLHLCILQ*STLHMK
Trigger: CTTCATGTGCAGTGTCGACAATTGCAGGATGCACAG...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370867.8
CDS-3UTR CAA 90 bp GTCTACCTCCATGCTAGATTAGAACGGCCCTTCACAGTTGGGCATCAACTACCTAACGGCCCTTCACAGTaGGGCATCAACTACCTTGAC +
Preference number: 5 (lower is better)
Translates to: VYLHARLERPFTVGHQLPNGPSQ*GINYLD
Trigger: GTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGTT...AGGTAGTTGATGCCCAACTGTGAAGGGCCGTTCTAATCTAGCATGGAGGTAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGCGGCTGAGGTCCGCTTaGCTCAAACATTGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLRLRSA*LKHCAF
Trigger: GAAGGCGCAATGTTTGAGCAAAGCGGACCTCAGCCG...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp GTTGTGCTACAGCTTTACAATGACCACATCACTAGCAATAGGAATTTTTCAGGTCTGGGGGCAGCCATATaGAAGCGAGCGGTGGCCGAA +
Preference number: 5 (lower is better)
Translates to: VVLQLYNDHITSNRNFSGLGAAI*KRAVAE
Trigger: TTCGGCCACCGCTCGCTTCAATATGGCTGCCCCCAG...ACCTGAAAAATTCCTATTGCTAGTGATGTGGTCATTGTAAAGCTGTAGCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp TCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGGAAGGTCTTCATGGGCATCAACTACCTaGACTCGCATCACATGCTGT +
Preference number: 5 (lower is better)
Translates to: SSVSLSSSSTSCTTGRSSWASTT*TRITCC
Trigger: ACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCCA...TGAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATCTGTGCATCCTGCAATaGTCGACACTGCACATGAAG +
Preference number: 5 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYLCILQ*STLHMK
Trigger: CTTCATGTGCAGTGTCGACAATTGCAGGATGCACAG...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000479111.5
CDS-3UTR CAA 90 bp AGCCTAAGCCTACACAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACTTTGAAGCTCTGCACTaGTCATTACTGGCTTATGAA +
Preference number: 5 (lower is better)
Translates to: SLSLHRVRILSITVFLLHFEALH*SLLAYE
Trigger: TTCATAAGCCAGTAATGACAAGTGCAGAGCTTCAAA...GTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTGTGTAGGCTTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATATTTTCAGACTGCTGTaGACTGGGGTAACTGAACCC +
Preference number: 5 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYIFRLL*TGVTEP
Trigger: GGGTTCAGTTACCCCAGTCAACAGCAGTCTGAAAAT...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479111.5
CDS-3UTR CAA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTCGCTTTGCTCAAACATaGCGCCTTCCATTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFRFAQT*RLPFPE
Trigger: TTCAGGAAATGGAAGGCGCAATGTTTGAGCAAAGCG...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGCGCTTTGCTCAAACATaGCGCCTTCCATTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLRFAQT*RLPFPE
Trigger: TTCAGGAAATGGAAGGCGCAATGTTTGAGCAAAGCG...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTAACGGCCCTTCACAGTaGGGCATCAACTACCTTGAC +
Preference number: 5 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFNGPSQ*GINYLD
Trigger: GTCAAGGTAGTTGATGCCCAACTGTGAAGGGCCGTT...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS CCA 90 bp AACAGGAAGTCAATATATTCCTCTGTCACCATCAGTTTTCCCTTATaGCTTAATGGAACTTCTAAGCCATGTGTACTCCGGACAGCCTCG +
Preference number: 5 (lower is better)
Translates to: NRKSIYSSVTISFPL*LNGTSKPCVLRTAS
Trigger: CGAGGCTGTCCGGAGTACACATGGCTTAGAAGTTCCATTAAGCCATAAGGGAAAACTGATGGTGACAGAGGAATATATTGACTTCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486467.1
CDS-3UTR CAA 90 bp GGCATCAACTACCTTGACTCGCATCACATGCTGTGTTTCAGCCTTTCTGGACTAGGGAAGATGGTAACATaGATTCCTAGATCATCATCA +
Preference number: 5 (lower is better)
Translates to: GINYLDSHHMLCFSLSGLGKMVT*IPRSSS
Trigger: TGATGATGATCTAGGAATCAATGTTACCATCTTCCC...TAGTCCAGAAAGGCTGAAACACAGCATGTGATGCGAGTCAAGGTAGTTGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp CAGGGTCAGAATCCTCAGTATCACTGTCTTCCTCCTCCACATCTTGTACCACTGCAACAAAGTTATAGTTaGAAGCTCTGCACTTGTCAT +
Preference number: 5 (lower is better)
Translates to: QGQNPQYHCLPPPHLVPLQQSYS*KLCTCH
Trigger: ATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTG...CAGTGGTACAAGATGTGGAGGAGGAAGACAGTGATACTGAGGATTCTGACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp CCATGCTTTTTGATGCCTCATATCCATTATATACCCTTTGTCTGCGAGAGGTTTTTCCTCCTCCACATCTaGTACCACTGGAAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PCFLMPHIHYIPFVCERFFLLHI*YHWKVF
Trigger: GAAGACCTTCCAGTGGTACAAGATGTGGAGGAGGAA...AAACCTCTCGCAGACAAAGGGTATATAATGGATATGAGGCATCAAAAAGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS CCA 90 bp AACAGGAAGTCAATATATTCCTCTGTCACCATCAGTTTTCCCTTATaGCTTAATGGAACTTCTAAGCCATGTGTACTCCGGACAGCCAAC +
Preference number: 5 (lower is better)
Translates to: NRKSIYSSVTISFPL*LNGTSKPCVLRTAN
Trigger: GTTGGCTGTCCGGAGTACACATGGCTTAGAAGTTCCATTAAGCCATAAGGGAAAACTGATGGTGACAGAGGAATATATTGACTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
ENST00000483990.1
ENST00000485401.5
CDS-3UTR CAA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGCGCTTTGCTCAAACATaGCGCCTTCCATTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMRFAQT*RLPFPE
Trigger: TTCAGGAAATGGAAGGCGCAATGTTTGAGCAAAGCG...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGAAGTGGCATCACCATTaGCTTTCTTCAGAGCTACAA +
Preference number: 5 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLKWHHH*LSSELQ
Trigger: TTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACTT...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000479111.5
CDS-3UTR CAA 90 bp TGCTGTGTTTCAGCCTTTCTGGACTATTCCCCATCACTGACTATACCATGCTTTTCCATTATATACCCTTaGTCTGCGAGAGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: CCVSAFLDYSPSLTIPCFSIIYP*SARGFL
Trigger: CAGAAAACCTCTCGCAGACAAAGGGTATATAATGGA...AAAGCATGGTATAGTCAGTGATGGGGAATAGTCCAGAAAGGCTGAAACACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAAACTGCAGAATGTGTaGTCATTTCACCACAGGATA +
Preference number: 5 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYKLQNV*SFHHRI
Trigger: TATCCTGTGGTGAAATGACAACACATTCTGCAGTTT...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp AGTGTACACATGAAATCCCTGGCACAGGTACACTGCAACATCTGTTCATGTGACAAACTGCAGAATGTGTaGTCATTTCACCACAGGATA +
Preference number: 5 (lower is better)
Translates to: SVHMKSLAQVHCNICSCDKLQNV*SFHHRI
Trigger: TATCCTGTGGTGAAATGACAACACATTCTGCAGTTT...GTCACATGAACAGATGTTGCAGTGTACCTGTGCCAGGGATTTCATGTGTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS GCA 90 bp ATGACCTCTGGCTTTAAGACTTATGACAGAAGAAACACACATGCATaGATGTGCATGTACATACACACACATACACACACACTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: MTSGFKTYDRRNTHA*MCMYIHTHTHTLAR
Trigger: TCTTGCCAGTGTGTGTGTATGTGTGTGTATGTACATGCACATGCATGCATGTGTGTTTCTTCTGTCATAAGTCTTAAAGCCAGAGGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449696.3
ENST00000486467.1
CDS-3UTR CAA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGTCTTTTACACAAAGTTaGTGTGTAACCAGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLSFTQS*CVTSSQ
Trigger: CTGGCTACTGGTTACACACAAACTTTGTGTAAAAGA...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp GCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATAGTTTGTTTGAAGCTCTGCACTaGTCATTACTGGCTTATGAA +
Preference number: 5 (lower is better)
Translates to: AESLDDNCTSSGQQSYSLFEALH*SLLAYE
Trigger: TTCATAAGCCAGTAATGACAAGTGCAGAGCTTCAAA...CAAACTATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp GGTACTGCTGAGAGCTTAGATGACAACTGCACATCCTCTGGGCAACAAAGTTATCAACAAAGTTATAGTTaGAAGCTCTGCACTTGTCAT +
Preference number: 5 (lower is better)
Translates to: GTAESLDDNCTSSGQQSYQQSYS*KLCTCH
Trigger: ATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTG...ATAACTTTGTTGCCCAGAGGATGTGCAGTTGTCATCTAAGCTCTCAGCAGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS-3UTR CAA 90 bp TCTATGATAACAATGCCTTCTTCTGGAGTACTTCCTGAAGGACCTGTCAGAAGCTCCCATCATGTGAACTaGTATCTTGTCCTTTTAGTC +
Preference number: 5 (lower is better)
Translates to: SMITMPSSGVLPEGPVRSSHHVN*YLVLLV
Trigger: GACTAAAAGGACAAGATACAAGTTCACATGATGGGA...GCTTCTGACAGGTCCTTCAGGAAGTACTCCAGAAGAAGGCATTGTTATCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS TCA 90 bp ATGGAATGCAGAATCTGTGCATCCTGCAATTGTCGACACTGCACATaGAGAACAAATGGTTCAAATTTCAAAGTGGCATCACCATTTGCT +
Preference number: 5 (lower is better)
Translates to: MECRICASCNCRHCT*RTNGSNFKVASPFA
Trigger: AGCAAATGGTGATGCCACTTTGAAATTTGAACCATTTGTTCTTCATGTGCAGTGTCGACAATTGCAGGATGCACAGATTCTGCATTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000479111.5
ENST00000483990.1
CDS TCA 90 bp TGCATGTACATACACACACATACACACACACTGGCAAGAAAATGTTaGAGAGAAGCAACTGAGTCTAAGAACTCAGCTTTATGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: CMYIHTHTHTLARKC*REATESKNSALWER
Trigger: CCTTTCCCATAAAGCTGAGTTCTTAGACTCAGTTGCTTCTCTTCAACATTTTCTTGCCAGTGTGTGTGTATGTGTGTGTATGTACATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449696.3
ENST00000486467.1
CDS CCA 90 bp TCTTTCTTTCTAGGTCTTGTCACCATCTTAGGTGATGTCAATGACTaGTATCCTTCTCATGTTCCACACAGCCTCTCAATTCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SFFLGLVTILGDVND*YPSHVPHSLSILFL
Trigger: CAAGAAAAGAATTGAGAGGCTGTGTGGAACATGAGAAGGATACCAGTCATTGACATCACCTAAGATGGTGACAAGACCTAGAAAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485401.5
CDS-3UTR CAA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATTGGGCATCAACTACCTaGACTCGCATCACATGCTGT +
Preference number: 5 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDWASTT*TRITCC
Trigger: ACAGCATGTGATGCGAGTCAAGGTAGTTGATGCCCA...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS GCA 90 bp TCTGGCTTTAAGACTTATGACAGAAGAAACACACATGCATGCATGTaGATGTACATACACACACATACACACACACTGGCAAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: SGFKTYDRRNTHACM*MYIHTHTHTLARKC
Trigger: ACATTTTCTTGCCAGTGTGTGTGTATGTGTGTGTATGTACATGCACATGCATGCATGTGTGTTTCTTCTGTCATAAGTCTTAAAGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449696.3
ENST00000486467.1
CDS-3UTR CAA 90 bp TCTGGGCAACAAAGTTATAGTTTGAAGCTCTGCACTTGTCATTACTGGCTTATGGGGAAGATGGTAACATaGATTCCTAGATCATCATCA +
Preference number: 5 (lower is better)
Translates to: SGQQSYSLKLCTCHYWLMGKMVT*IPRSSS
Trigger: TGATGATGATCTAGGAATCAATGTTACCATCTTCCC...CATAAGCCAGTAATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTGCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS TCA 90 bp AAGCAACTGAGTCTAAGAACTCAGCTTTATGGGAAAGGCAGCAATTaGGTTGGGATTTTAAAGGATGAGTGCAATTTCACCAGACATAAA +
Preference number: 5 (lower is better)
Translates to: KQLSLRTQLYGKGSN*VGILKDECNFTRHK
Trigger: TTTATGTCTGGTGAAATTGCACTCATCCTTTAAAATCCCAACTCAATTGCTGCCTTTCCCATAAAGCTGAGTTCTTAGACTCAGTTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449696.3
CDS CCA 90 bp ATTGTCGACACTGCACATGAAGAACAAATGGTTCAAATTTCAAAGTaGCATCACCATTTGCTTTCTTCAGAGCTACAATCACATCATCTT +
Preference number: 5 (lower is better)
Translates to: IVDTAHEEQMVQISK*HHHLLSSELQSHHL
Trigger: AAGATGATGTGATTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACTTTGAAATTTGAACCATTTGTTCTTCATGTGCAGTGTCGACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000479111.5
ENST00000483990.1
CDS-3UTR CAA 90 bp CTTCCTGAAGGACCTGTCAGAAGCTGTTTTACAGTTAACATTTTAAGTAGTATAAAGTGGCATCACCATTaGCTTTCTTCAGAGCTACAA +
Preference number: 5 (lower is better)
Translates to: LPEGPVRSCFTVNILSSIKWHHH*LSSELQ
Trigger: TTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACTT...TATACTACTTAAAATGTTAACTGTAAAACAGCTTCTGACAGGTCCTTCAGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370867.8
CDS-3UTR CAA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATTCCCATCATGTGAACTaGTATCTTGTCCTTTTAGTC +
Preference number: 5 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDSHHVN*YLVLLV
Trigger: GACTAAAAGGACAAGATACAAGTTCACATGATGGGA...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS-3UTR CAA 90 bp ATTATAATCTTATGGGGCCACCATATCGTATATGGTATATGGTCCATCATTGATCAACAAAGTTATAGTTaGAAGCTCTGCACTTGTCAT +
Preference number: 5 (lower is better)
Translates to: IIILWGHHIVYGIWSIIDQQSYS*KLCTCH
Trigger: ATGACAAGTGCAGAGCTTCAAACTATAACTTTGTTG...ATCAATGATGGACCATATACCATATACGATATGGTGGCCCCATAAGATTATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS TCA 72 bp CTTCCATTTCCTGAACTCCGCGCTGCGATCCATGGGTaGCGGACTCAGGGTCTGCGCTCGGCTCCTTCATGG +
Preference number: 6 (lower is better)
Translates to: LPFPELRAAIHG*RTQGLRSAPSW
Trigger: CCATGAAGGAGCCGAGCGCAGACCCTGAGTCCGTCACCCATGGATCGCAGCGCGGAGTTCAGGAAATGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS CAA 72 bp ACTGCCCTTCCGGCTGAGGTCCGCTTTGCTCAAACATaGCGCCTTCCATTTCCTGAACTCCGCGCTGCGATC +
Preference number: 6 (lower is better)
Translates to: TALPAEVRFAQT*RLPFPELRAAI
Trigger: GATCGCAGCGCGGAGTTCAGGAAATGGAAGGCGCAATGTTTGAGCAAAGCGGACCTCAGCCGGAAGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS TCA 72 bp GGTCCGCTTTGCTCAAACATTGCGCCTTCCATTTCCTaGACTCCGCGCTGCGATCCATGGGTGACGGACTCA +
Preference number: 6 (lower is better)
Translates to: GPLCSNIAPSIS*TPRCDPWVTDS
Trigger: TGAGTCCGTCACCCATGGATCGCAGCGCGGAGTTCAGGAAATGGAAGGCGCAATGTTTGAGCAAAGCGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370867.8
ENST00000457880.6
CDS TCA 72 bp GCTCTACCACATCCTCGTCAACACTGCCCTTCCGGCTaGGGTCCGCTTTGCTCAAACATTGCGCCTTCCATT +
Preference number: 6 (lower is better)
Translates to: ALPHPRQHCPSG*GPLCSNIAPSI
Trigger: AATGGAAGGCGCAATGTTTGAGCAAAGCGGACCTCAGCCGGAAGGGCAGTGTTGACGAGGATGTGGTAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS TCA 72 bp AGGATGCGGCCAGCGCAGGAGCTGGTGGTGAAAAACTaGTCTCGCATGTTCAGAAACTGCACAAGCTCTACC +
Preference number: 6 (lower is better)
Translates to: RMRPAQELVVKN*SRMFRNCTSST
Trigger: GGTAGAGCTTGTGCAGTTTCTGAACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCGCTGGCCGCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS TCA 72 bp CAAGGAGTAGGATGCGGCCAGCGCAGGAGCTGGTGGTaGAAAACTGATCTCGCATGTTCAGAAACTGCACAA +
Preference number: 6 (lower is better)
Translates to: QGVGCGQRRSWW*KTDLACSETAQ
Trigger: TTGTGCAGTTTCTGAACATGCGAGATCAGTTTTTCACCACCAGCTCCTGCGCTGGCCGCATCCTACTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000457880.6
ENST00000479111.5
CDS CCA 72 bp CTAGGTCTTGTCACCATCTTAGGTGATGTCAATGACTaGTATCCTTCTCATGTTCCACACAGCCTCTCAATT +
Preference number: 6 (lower is better)
Translates to: LGLVTILGDVND*YPSHVPHSLSI
Trigger: AATTGAGAGGCTGTGTGGAACATGAGAAGGATACCAGTCATTGACATCACCTAAGATGGTGACAAGACCTAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485401.5
CDS TCA 72 bp TTTTTCCTCTCTTTCCCACCGTTATGCCAGAGTTCCTaGAACCAGAATCTATTGCCATGGAATGCAGAATCT +
Preference number: 6 (lower is better)
Translates to: FFLSFPPLCQSS*NQNLLPWNAES
Trigger: AGATTCTGCATTCCATGGCAATAGATTCTGGTTTCAGGAACTCTGGCATAACGGTGGGAAAGAGAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000479111.5
ENST00000483990.1
CDS TCA 72 bp TTTTTCCTCTCTTTCCCACCGTTATGCCAGAGTTCCTaGAACCAGAATCTATTGCCATGGAATGCACATCAT +
Preference number: 6 (lower is better)
Translates to: FFLSFPPLCQSS*NQNLLPWNAHH
Trigger: ATGATGTGCATTCCATGGCAATAGATTCTGGTTTCAGGAACTCTGGCATAACGGTGGGAAAGAGAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457880.6
CDS TCA 72 bp TTTTTCCTCTCTTTCCCACCGTTATGCCAGAGTTCCTaGAACCAGAATCTATTGCCATGGAATGCTGTAAGA +
Preference number: 6 (lower is better)
Translates to: FFLSFPPLCQSS*NQNLLPWNAVR
Trigger: TCTTACAGCATTCCATGGCAATAGATTCTGGTTTCAGGAACTCTGGCATAACGGTGGGAAAGAGAGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485401.5
CDS GCA 72 bp AAGACTTATGACAGAAGAAACACACATGCATGCATGTaGATGTACATACACACACATACACACACACTGGCA +
Preference number: 6 (lower is better)
Translates to: KTYDRRNTHACM*MYIHTHTHTLA
Trigger: TGCCAGTGTGTGTGTATGTGTGTGTATGTACATGCACATGCATGCATGTGTGTTTCTTCTGTCATAAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449696.3
ENST00000486467.1
CDS CCA 72 bp TCAATATATTCCTCTGTCACCATCAGTTTTCCCTTATaGCTTAATGGAACTTCTAAGCCATGTGTACTCCGG +
Preference number: 6 (lower is better)
Translates to: SIYSSVTISFPL*LNGTSKPCVLR
Trigger: CCGGAGTACACATGGCTTAGAAGTTCCATTAAGCCATAAGGGAAAACTGATGGTGACAGAGGAATATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370867.8
ENST00000449696.3
ENST00000457880.6
ENST00000479111.5
ENST00000483990.1
ENST00000485401.5
ENST00000486467.1
CDS CAA 72 bp TATTGCCATGGAATGCAGAATCTGTGCATCCTGCAATaGTCGACACTGCACATGAAGAACAAATGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: YCHGMQNLCILQ*STLHMKNKWFK
Trigger: TTTGAACCATTTGTTCTTCATGTGCAGTGTCGACAATTGCAGGATGCACAGATTCTGCATTCCATGGCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000479111.5
ENST00000483990.1
CDS TCA 72 bp AGTCTAAGAACTCAGCTTTATGGGAAAGGCAGCAATTaGGTTGGGATTTTAAAGGATGAGTGCAATTTCACC +
Preference number: 6 (lower is better)
Translates to: SLRTQLYGKGSN*VGILKDECNFT
Trigger: GGTGAAATTGCACTCATCCTTTAAAATCCCAACTCAATTGCTGCCTTTCCCATAAAGCTGAGTTCTTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449696.3
CDS GCA 72 bp GGCTTTAAGACTTATGACAGAAGAAACACACATGCATaGATGTGCATGTACATACACACACATACACACACA +
Preference number: 6 (lower is better)
Translates to: GFKTYDRRNTHA*MCMYIHTHTHT
Trigger: TGTGTGTGTATGTGTGTGTATGTACATGCACATGCATGCATGTGTGTTTCTTCTGTCATAAGTCTTAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449696.3
ENST00000486467.1
CDS CAA 90 bp GCACATGAAGAACAAATGGTTCAAATTTCAAAGTGGCATCACCATTaGCTTTCTTCAGAGCTACAATCACATCATCTTTTACACAAAGTT +
Preference number: 6 (lower is better)
Translates to: AHEEQMVQISKWHHH*LSSELQSHHLLHKV
Trigger: AACTTTGTGTAAAAGATGATGTGATTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACTTTGAAATTTGAACCATTTGTTCTTCATGTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000479111.5
ENST00000483990.1
CDS CAA 72 bp GAACAAATGGTTCAAATTTCAAAGTGGCATCACCATTaGCTTTCTTCAGAGCTACAATCACATCATCTTTTA +
Preference number: 6 (lower is better)
Translates to: EQMVQISKWHHH*LSSELQSHHLL
Trigger: TAAAAGATGATGTGATTGTAGCTCTGAAGAAAGCAAATGGTGATGCCACTTTGAAATTTGAACCATTTGTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370867.8
ENST00000479111.5
ENST00000483990.1
CDS CAA 72 bp AGTTGTAAAACATTGATGAAAACTTCTATGCTTGACTaGATCTTTCTTTCTAGGTCTTGTCACCATCTTAGG +
Preference number: 6 (lower is better)
Translates to: SCKTLMKTSMLD*IFLSRSCHHLR
Trigger: CCTAAGATGGTGACAAGACCTAGAAAGAAAGATCAAGTCAAGCATAGAAGTTTTCATCAATGTTTTACAACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485401.5