Pregenerated sensors for TYRP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000107165Ensembl transcript IDs: ENST00000381136.2, ENST00000381142.3, ENST00000388918.10, ENST00000459790.1, ENST00000470909.1, ENST00000473504.1, ENST00000473763.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGACGGCACGTCCCACAGTTGTGTCCTGAGAAATTGCCGTTGCAGTaGCATGTCCTATTGAAGAAGCGCAAGGGCCAGACCTCCCGATCA | + |
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Preference number: 5 (lower is better) Translates to: GRHVPQLCPEKLPLQ*HVLLKKRKGQTSRS Trigger: TGATCGGGAGGTCTGGCCCTTGCGCTTCTTCAATAGGACATGTCACTGCAACGGCAATTTCTCAGGACACAACTGTGGGACGTGCCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388918.10 ENST00000459790.1 |
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| CDS TCA 90 bp | CGCAGGAGGTGGTACCTGTGCCATGTGAGAAAAGCTGGTCCCTCATaGGAGAAATCCACTTCACCAAAGCTTTCCTGTCCTACCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RRRWYLCHVRKAGPS*EKSTSPKLSCPTPR Trigger: CCTTGGGGTAGGACAGGAAAGCTTTGGTGAAGTGGATTTCTCTCATGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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| CDS TCA 90 bp | CCTGCATGTCTTTCTCCAGACGCAGGAGGTGGTACCTGTGCCATGTaGGAAAAGCTGGTCCCTCATGAGAGAAATCCACTTCACCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: PACLSPDAGGGTCAM*EKLVPHERNPLHQS Trigger: GCTTTGGTGAAGTGGATTTCTCTCATGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCGTCTGGAGAAAGACATGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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| CDS CCA 90 bp | CAAGCACTGAGCGACATCCTGTGGTTCAGGAAGACGTTGCACCATTaGTCTGGCCACATTTCCAGCTGGATTTCTCCTAATTGGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: QALSDILWFRKTLHH*SGHISSWISPNWPI Trigger: GATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCACAGGATGTCGCTCAGTGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000470909.1 |
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| CDS CCA 90 bp | TGGTTCAGGAAGACGTTGCACCATTGGTCTGGCCACATTTCCAGCTaGATTTCTCCTAATTGGCCCATCCTCGGTGCCTGCATGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: WFRKTLHHWSGHISS*ISPNWPILGACMSF Trigger: GAAAGACATGCAGGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381136.2 |
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| CDS TCA 90 bp | CACAGTTGTGTCCTGAGAAATTGCCGTTGCAGTGACATGTCCTATTaGAGAAGCGCAAGGGCCAGACCTCCCGATCATCTCTGCCATCAT | + |
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Preference number: 5 (lower is better) Translates to: HSCVLRNCRCSDMSY*RSARARPPDHLCHH Trigger: ATGATGGCAGAGATGATCGGGAGGTCTGGCCCTTGCGCTTCTTCAATAGGACATGTCACTGCAACGGCAATTTCTCAGGACACAACTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388918.10 ENST00000459790.1 |
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| CDS TCA 90 bp | TGTTGCCATCTGGCCCCAGTATTTCTTCTGATCTCCTGGTGGCAATaGCAAATAAAGGGTGAGTTGTGCGCTTTGCCATATCCAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CCHLAPVFLLISWWQ*QIKGELCALPYPGP Trigger: GGGCCCTGGATATGGCAAAGCGCACAACTCACCCTTTATTTGTCATTGCCACCAGGAGATCAGAAGAAATACTGGGGCCAGATGGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CCA 90 bp | TTTCTCCAGACGCAGGAGGTGGTACCTGTGCCATGTGAGAAAAGCTaGTCCCTCATGAGAGAAATCCACTTCACCAAAGCTTTCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: FLQTQEVVPVPCEKS*SLMREIHFTKAFLS Trigger: GGACAGGAAAGCTTTGGTGAAGTGGATTTCTCTCATGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCGTCTGGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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| CDS TCA 90 bp | CCCAGTATTTCTTCTGATCTCCTGGTGGCAATGACAAATAAAGGGTaGGTTGTGCGCTTTGCCATATCCAGGGCCCGGACAAAGTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PSISSDLLVAMTNKG*VVRFAISRARTKWF Trigger: GAACCACTTTGTCCGGGCCCTGGATATGGCAAAGCGCACAACTCACCCTTTATTTGTCATTGCCACCAGGAGATCAGAAGAAATACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CCA 90 bp | TGGTTCAGGAAGACGTTGCACCATTGGTCTGGCCACATTTCCAGCTaGATTTCTCCTAATTGGCCCATCCTCGGTGCTGTTACAAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: WFRKTLHHWSGHISS*ISPNWPILGAVTKC Trigger: ACACTTTGTAACAGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 90 bp | TGGTTCAGGAAGACGTTGCACCATTGGTCTGGCCACATTTCCAGCTaGATTTCTCCTAATTGGCCCATCCTCGGTGCATTTCTTTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: WFRKTLHHWSGHISS*ISPNWPILGAFLWK Trigger: TTTCCAAAGAAATGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470909.1 |
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| CDS CCA 90 bp | CTCCCGACTTGGCCATTGAATTTCATAAGTGTATCCCAGGTTGTCTaGAGCAGTAACAAACATTTCTGTGTTGGTGACTGGGGGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LPTWPLNFISVSQVV*SSNKHFCVGDWGPE Trigger: TTCTGGCCCCCAGTCACCAACACAGAAATGTTTGTTACTGCTCCAGACAACCTGGGATACACTTATGAAATTCAATGGCCAAGTCGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000388918.10 ENST00000473504.1 |
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| CDS TCA 90 bp | CCATACTGCGTCTGGCACGAATCAGATAAGAAGCAGTCCCAAAAATaGGTGCAACCAGTAACAAAGCGCCAACTACTGCTATGGCAATTA | + |
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Preference number: 5 (lower is better) Translates to: PYCVWHESDKKQSQK*VQPVTKRQLLLWQL Trigger: TAATTGCCATAGCAGTAGTTGGCGCTTTGTTACTGGTTGCACTCATTTTTGGGACTGCTTCTTATCTGATTCGTGCCAGACGCAGTATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000473504.1 |
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| CDS GCA 90 bp | AAACTCCCGACCAGCATTGTATCTCCTCAGCCATTCATCAAAGACTaGATCTGTGAAGGTGTGCAGGAGGACAAAAATAGGATCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: KLPTSIVSPQPFIKD*ICEGVQEDKNRIIW Trigger: CCAAATGATCCTATTTTTGTCCTCCTGCACACCTTCACAGATGCAGTCTTTGATGAATGGCTGAGGAGATACAATGCTGGTCGGGAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381142.3 |
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| CDS CCA 90 bp | TCCCAGGTTGTCTGGAGCAGTAACAAACATTTCTGTGTTGGTGACTaGGGGCCAGAATGGCACCATGTTGTATTGTCTATTATGTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVVWSSNKHFCVGD*GPEWHHVVLSIMSN Trigger: ATTGGACATAATAGACAATACAACATGGTGCCATTCTGGCCCCCAGTCACCAACACAGAAATGTTTGTTACTGCTCCAGACAACCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000388918.10 ENST00000473504.1 |
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| CDS GCA 90 bp | TTGTATCTCCTCAGCCATTCATCAAAGACTGCATCTGTGAAGGTGTaGAGGAGGACAAAAATAGGATCATTTGGAGACAAATGGGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LYLLSHSSKTASVKV*RRTKIGSFGDKWVC Trigger: ACAAACCCATTTGTCTCCAAATGATCCTATTTTTGTCCTCCTGCACACCTTCACAGATGCAGTCTTTGATGAATGGCTGAGGAGATACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 |
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| CDS GCA 90 bp | TGTGGATATATCAGCATTGTATCTCCTCAGCCATTCATCAAAGACTaGATCTGTGAAGGTGTGCAGGAGGACAAAAATAGGATCATTTGG | + |
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Preference number: 5 (lower is better) Translates to: CGYISIVSPQPFIKD*ICEGVQEDKNRIIW Trigger: CCAAATGATCCTATTTTTGTCCTCCTGCACACCTTCACAGATGCAGTCTTTGATGAATGGCTGAGGAGATACAATGCTGATATATCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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| CDS TCA 90 bp | CCACTTCACCAAAGCTTTCCTGTCCTACCCCAAGGAAAGTCTTTTTaGCTGAGTAATAGTGTGTCCAAACAAAGTAGTTATAAATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PLHQSFPVLPQGKSF*LSNSVSKQSSYKWK Trigger: TTTCCATTTATAACTACTTTGTTTGGACACACTATTACTCAGTCAAAAAGACTTTCCTTGGGGTAGGACAGGAAAGCTTTGGTGAAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS TCA 90 bp | TTCACCAAAGCTTTCCTGTCCTACCCCAAGGAAAGTCTTTTTGACTaGGTAATAGTGTGTCCAAACAAAGTAGTTATAAATGGAAATGTT | + |
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Preference number: 5 (lower is better) Translates to: FTKAFLSYPKESLFD*VIVCPNKVVINGNV Trigger: AACATTTCCATTTATAACTACTTTGTTTGGACACACTATTACTCAGTCAAAAAGACTTTCCTTGGGGTAGGACAGGAAAGCTTTGGTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CCA 72 bp | CTCGGTGCCTGCATGTCTTTCTCCAGACGCAGGAGGTaGTACCTGTGCCATGTGAGAAAAGCTGGTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LGACMSFSRRRR*YLCHVRKAGPS Trigger: TGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCGTCTGGAGAAAGACATGCAGGCACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381136.2 |
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| CDS CCA 72 bp | CTGGGCAACACATACCACTTCTCAAAGCCTCAACAGTaGCACACTGTCTTGGGAATTGAGCCCGGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGNTYHFSKPQQ*HTVLGIEPGPA Trigger: AGCAGGCCCGGGCTCAATTCCCAAGACAGTGTGCCACTGTTGAGGCTTTGAGAAGTGGTATGTGTTGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000388918.10 ENST00000459790.1 ENST00000473763.1 |
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| CDS CCA 72 bp | AAGACGTTGCACCATTGGTCTGGCCACATTTCCAGCTaGATTTCTCCTAATTGGCCCATCCTCGGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KTLHHWSGHISS*ISPNWPILGAC Trigger: GCAGGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381136.2 |
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| CDS TCA 72 bp | GTCCTGAGAAATTGCCGTTGCAGTGACATGTCCTATTaGAGAAGCGCAAGGGCCAGACCTCCCGATCATCTC | + |
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Preference number: 6 (lower is better) Translates to: VLRNCRCSDMSY*RSARARPPDHL Trigger: GAGATGATCGGGAGGTCTGGCCCTTGCGCTTCTTCAATAGGACATGTCACTGCAACGGCAATTTCTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388918.10 ENST00000459790.1 |
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| CDS TCA 72 bp | GTCCCACAGTTGTGTCCTGAGAAATTGCCGTTGCAGTaGCATGTCCTATTGAAGAAGCGCAAGGGCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: VPQLCPEKLPLQ*HVLLKKRKGQT Trigger: GGTCTGGCCCTTGCGCTTCTTCAATAGGACATGTCACTGCAACGGCAATTTCTCAGGACACAACTGTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000388918.10 ENST00000459790.1 |
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| CDS CCA 72 bp | TGGTCTGGCCACATTTCCAGCTGGATTTCTCCTAATTaGCCCATCCTCGGTGCCTGCATGTCTTTCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: WSGHISSWISPN*PILGACMSFSR Trigger: TCTGGAGAAAGACATGCAGGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381136.2 |
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| CDS CAA 72 bp | CAAGCACTGAGCGACATCCTGTGGTTCAGGAAGACGTaGCACCATTGGTCTGGCCACATTTCCAGCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: QALSDILWFRKT*HHWSGHISSWI Trigger: AATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCACAGGATGTCGCTCAGTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000470909.1 |
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| CDS CAA 90 bp | GGCAACACATACCACTTCTCAAAGCCTCAACAGTGGCACACTGTCTaGGGAATTGAGCCCGGGCCTGCTGAAAAAGTAGCAAGGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GNTYHFSKPQQWHTV*GIEPGPAEKVARGR Trigger: TCTTCCCCTTGCTACTTTTTCAGCAGGCCCGGGCTCAATTCCCAAGACAGTGTGCCACTGTTGAGGCTTTGAGAAGTGGTATGTGTTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000388918.10 ENST00000459790.1 ENST00000473763.1 |
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| CDS TCA 72 bp | CTTTCTCCAGACGCAGGAGGTGGTACCTGTGCCATGTaGGAAAAGCTGGTCCCTCATGAGAGAAATCCACTT | + |
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Preference number: 6 (lower is better) Translates to: LSPDAGGGTCAM*EKLVPHERNPL Trigger: AAGTGGATTTCTCTCATGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCGTCTGGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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| CDS TCA 72 bp | TCTTCTGATCTCCTGGTGGCAATGACAAATAAAGGGTaGGTTGTGCGCTTTGCCATATCCAGGGCCCGGACA | + |
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Preference number: 6 (lower is better) Translates to: SSDLLVAMTNKG*VVRFAISRART Trigger: TGTCCGGGCCCTGGATATGGCAAAGCGCACAACTCACCCTTTATTTGTCATTGCCACCAGGAGATCAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CCA 72 bp | TGGTCTGGCCACATTTCCAGCTGGATTTCTCCTAATTaGCCCATCCTCGGTGCTGTTACAAAGTGTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WSGHISSWISPN*PILGAVTKCSQ Trigger: CTGGGAACACTTTGTAACAGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 72 bp | AAGACGTTGCACCATTGGTCTGGCCACATTTCCAGCTaGATTTCTCCTAATTGGCCCATCCTCGGTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KTLHHWSGHISS*ISPNWPILGAV Trigger: AACAGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 72 bp | ACGCAGGAGGTGGTACCTGTGCCATGTGAGAAAAGCTaGTCCCTCATGAGAGAAATCCACTTCACCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: TQEVVPVPCEKS*SLMREIHFTKA Trigger: AGCTTTGGTGAAGTGGATTTCTCTCATGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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| CDS CCA 72 bp | AACATTTCCTGCATGTCTTTCTCCAGACGCAGGAGGTaGTACCTGTGCCATGTGAGAAAAGCTGGTCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: NISCMSFSRRRR*YLCHVRKAGPS Trigger: TGAGGGACCAGCTTTTCTCACATGGCACAGGTACCACCTCCTGCGTCTGGAGAAAGACATGCAGGAAATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CAA 72 bp | TACCACTTCTCAAAGCCTCAACAGTGGCACACTGTCTaGGGAATTGAGCCCGGGCCTGCTGAAAAAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: YHFSKPQQWHTV*GIEPGPAEKVA Trigger: TGCTACTTTTTCAGCAGGCCCGGGCTCAATTCCCAAGACAGTGTGCCACTGTTGAGGCTTTGAGAAGTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000388918.10 ENST00000459790.1 ENST00000473763.1 |
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| CDS CAA 90 bp | ACCAACTTCCAAGCACTGAGCGACATCCTGTGGTTCAGGAAGACGTaGCACCATTGGTCTGGCCACATTTCCAGCTGGATTTCTCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: TNFQALSDILWFRKT*HHWSGHISSWISPN Trigger: ATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCACAGGATGTCGCTCAGTGCTTGGAAGTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000470909.1 |
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| CDS TCA 72 bp | AAAGGAGGCGTGTCAAATAAACCAACTTCCAAGCACTaGGCGACATCCTGTGGTTCAGGAAGACGTTGCACC | + |
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Preference number: 6 (lower is better) Translates to: KGGVSNKPTSKH*ATSCGSGRRCT Trigger: GGTGCAACGTCTTCCTGAACCACAGGATGTCGCTCAGTGCTTGGAAGTTGGTTTATTTGACACGCCTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000470909.1 |
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| CDS CCA 72 bp | AGCGACATCCTGTGGTTCAGGAAGACGTTGCACCATTaGTCTGGCCACATTTCCAGCTGGATTTCTCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SDILWFRKTLHH*SGHISSWISPN Trigger: ATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTTCCTGAACCACAGGATGTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000470909.1 |
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| CDS CCA 72 bp | TGTGAAGACTTCGAACAGCAGGGTCATACTTTCCCGTaGGGTCACTGTAACCTTCCACTGTGTTTCGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: CEDFEQQGHTFP*GHCNLPLCFGN Trigger: GTTTCCGAAACACAGTGGAAGGTTACAGTGACCCCACGGGAAAGTATGACCCTGCTGTTCGAAGTCTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 72 bp | AAGACGTTGCACCATTGGTCTGGCCACATTTCCAGCTaGATTTCTCCTAATTGGCCCATCCTCGGTGCATTT | + |
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Preference number: 6 (lower is better) Translates to: KTLHHWSGHISS*ISPNWPILGAF Trigger: AAATGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCAATGGTGCAACGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470909.1 |
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| CDS CAA 72 bp | CCCAGGTTGTCTGGAGCAGTAACAAACATTTCTGTGTaGGTGACTGGGGGCCAGAATGGCACCATGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: PRLSGAVTNISV*VTGGQNGTMLY Trigger: ATACAACATGGTGCCATTCTGGCCCCCAGTCACCAACACAGAAATGTTTGTTACTGCTCCAGACAACCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000388918.10 ENST00000473504.1 |
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| CDS TCA 72 bp | CTGGCCCCAGTATTTCTTCTGATCTCCTGGTGGCAATaGCAAATAAAGGGTGAGTTGTGCGCTTTGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: LAPVFLLISWWQ*QIKGELCALPY Trigger: ATATGGCAAAGCGCACAACTCACCCTTTATTTGTCATTGCCACCAGGAGATCAGAAGAAATACTGGGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CCA 72 bp | TGGTCTGGCCACATTTCCAGCTGGATTTCTCCTAATTaGCCCATCCTCGGTGCATTTCTTTGGAAAGTGATA | + |
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Preference number: 6 (lower is better) Translates to: WSGHISSWISPN*PILGAFLWKVI Trigger: TATCACTTTCCAAAGAAATGCACCGAGGATGGGCCAATTAGGAGAAATCCAGCTGGAAATGTGGCCAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470909.1 |
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| CDS CAA 90 bp | CTTCCAAGGAGTCACAGACCACTCGCCATTGAGAAAAGACAGAGTTaGGGCTTATTAGAGTGGAATCAAAGTTGCTTCTGGATCCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LPRSHRPLAIEKRQS*GLLEWNQSCFWIPS Trigger: TGATGGGATCCAGAAGCAACTTTGATTCCACTCTAATAAGCCCAAACTCTGTCTTTTCTCAATGGCGAGTGGTCTGTGACTCCTTGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381142.3 ENST00000388918.10 |
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| CDS TCA 72 bp | GTCTGGCACGAATCAGATAAGAAGCAGTCCCAAAAATaGGTGCAACCAGTAACAAAGCGCCAACTACTGCTA | + |
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Preference number: 6 (lower is better) Translates to: VWHESDKKQSQK*VQPVTKRQLLL Trigger: TAGCAGTAGTTGGCGCTTTGTTACTGGTTGCACTCATTTTTGGGACTGCTTCTTATCTGATTCGTGCCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000473504.1 |
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| CDS CCA 72 bp | TGTGAAGGTGTGCAGGAGGACAAAAATAGGATCATTTaGAGACAAATGGGTTTGTCCCCCTGTTCCATTCAG | + |
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Preference number: 6 (lower is better) Translates to: CEGVQEDKNRII*RQMGLSPCSIQ Trigger: CTGAATGGAACAGGGGGACAAACCCATTTGTCTCCAAATGATCCTATTTTTGTCCTCCTGCACACCTTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 72 bp | GTCTGGAGCAGTAACAAACATTTCTGTGTTGGTGACTaGGGGCCAGAATGGCACCATGTTGTATTGTCTATT | + |
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Preference number: 6 (lower is better) Translates to: VWSSNKHFCVGD*GPEWHHVVLSI Trigger: AATAGACAATACAACATGGTGCCATTCTGGCCCCCAGTCACCAACACAGAAATGTTTGTTACTGCTCCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000388918.10 ENST00000473504.1 |
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| CDS CAA 72 bp | AGTCACAGACCACTCGCCATTGAGAAAAGACAGAGTTaGGGCTTATTAGAGTGGAATCAAAGTTGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SHRPLAIEKRQS*GLLEWNQSCFW Trigger: CCAGAAGCAACTTTGATTCCACTCTAATAAGCCCAAACTCTGTCTTTTCTCAATGGCGAGTGGTCTGTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381142.3 ENST00000388918.10 |
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| CDS GCA 72 bp | CTCAGCCATTCATCAAAGACTGCATCTGTGAAGGTGTaGAGGAGGACAAAAATAGGATCATTTGGAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: LSHSSKTASVKV*RRTKIGSFGDK Trigger: TTTGTCTCCAAATGATCCTATTTTTGTCCTCCTGCACACCTTCACAGATGCAGTCTTTGATGAATGGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 72 bp | AGTTTGGGCTTATTAGAGTGGAATCAAAGTTGCTTCTaGATCCCATCAAGTCATCCGTGCAGATATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SLGLLEWNQSCF*IPSSHPCRYHR Trigger: TCTGTGATATCTGCACGGATGACTTGATGGGATCCAGAAGCAACTTTGATTCCACTCTAATAAGCCCAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381142.3 ENST00000388918.10 |
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| CDS CCA 72 bp | TGGCCATTGAATTTCATAAGTGTATCCCAGGTTGTCTaGAGCAGTAACAAACATTTCTGTGTTGGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: WPLNFISVSQVV*SSNKHFCVGDW Trigger: CCAGTCACCAACACAGAAATGTTTGTTACTGCTCCAGACAACCTGGGATACACTTATGAAATTCAATGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381136.2 ENST00000388918.10 ENST00000473504.1 |
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| CDS CAA 90 bp | CAACCAGGTGGTTTTGTGATACTAATGCATAAGAGAGTAGGGCATTaGTTAGACCACAGACTGATTAGGATTCTGGAGTTTTTCATATTC | + |
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Preference number: 6 (lower is better) Translates to: QPGGFVILMHKRVGH*LDHRLIRILEFFIF Trigger: GAATATGAAAAACTCCAGAATCCTAATCAGTCTGTGGTCTAACAAATGCCCTACTCTCTTATGCATTAGTATCACAAAACCACCTGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000473504.1 |
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| CDS TCA 72 bp | CAAAGCTTTCCTGTCCTACCCCAAGGAAAGTCTTTTTaGCTGAGTAATAGTGTGTCCAAACAAAGTAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: QSFPVLPQGKSF*LSNSVSKQSSY Trigger: ATAACTACTTTGTTTGGACACACTATTACTCAGTCAAAAAGACTTTCCTTGGGGTAGGACAGGAAAGCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000388918.10 |
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| CDS CAA 72 bp | GGTTTTGTGATACTAATGCATAAGAGAGTAGGGCATTaGTTAGACCACAGACTGATTAGGATTCTGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: GFVILMHKRVGH*LDHRLIRILEF Trigger: AAACTCCAGAATCCTAATCAGTCTGTGGTCTAACAAATGCCCTACTCTCTTATGCATTAGTATCACAAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000381136.2 ENST00000381142.3 ENST00000388918.10 ENST00000473504.1 |
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| CDS TCA 72 bp | ATTTTATTAAGAGCCTTGAGTCTCATGCAGGACTTATaGACTCATTCATATCTCCACTTACCTATGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: ILLRALSLMQDL*THSYLHLPMRT Trigger: GGTTCTCATAGGTAAGTGGAGATATGAATGAGTTCATAAGTCCTGCATGAGACTCAAGGCTCTTAATAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459790.1 |
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| CDS CCA 72 bp | GTATTGTCTATTATGTCCAATAGGGGCATTTTCCAATaGAAATGTGGATATATCAGCATTGTATCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VLSIMSNRGIFQ*KCGYISIVSPQ Trigger: CTGAGGAGATACAATGCTGATATATCCACATTTCCATTGGAAAATGCCCCTATTGGACATAATAGACAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381136.2 ENST00000388918.10 |
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