RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TYRO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000092445

Ensembl transcript IDs: ENST00000263798.8, ENST00000559066.5, ENST00000560227.1, ENST00000560992.1

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACCCTATTCCCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTaGGCCCTCCCAGTCTCCCCACACTCCTCACTAGCACATGTGTGG +
Preference number: 1 (lower is better)
Translates to: ATLFPCPQPEAAQYL*ALPVSPHSSLAHVW
Trigger: CCACACATGTGCTAGTGAGGAGTGTGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGGGAATAGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR GCA 90 bp GGTTTTTCAGGATATTTGCTTTCAGAAGCAGCCACCCTATTCCCCTaGCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTC +
Preference number: 1 (lower is better)
Translates to: GFSGYLLSEAATLFP*PQPEAAQYLWALPV
Trigger: GACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGGGAATAGGGTGGCTGCTTCTGAAAGCAAATATCCTGAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR GCA 90 bp GGGAACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTaGTTTCAGAAGCAGCCACCCTATTCCCCTGCCCTCAGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: GNQNLEYQQQVFQDI*FQKQPPYSPALSQK
Trigger: CTTCTGGCTGAGGGCAGGGGAATAGGGTGGCTGCTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR TCA 90 bp GGAAAGATTCTGAAAGCTACTTGCCTGGAAGTTTTTCAGGTTTCATaGTCTACATGGGAACCAGAATTTGGAGTACCAGCAACAGGTTTT +
Preference number: 1 (lower is better)
Translates to: GKILKATCLEVFQVS*STWEPEFGVPATGF
Trigger: AAAACCTGTTGCTGGTACTCCAAATTCTGGTTCCCATGTAGATCATGAAACCTGAAAAACTTCCAGGCAAGTAGCTTTCAGAATCTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR TCA 90 bp TCAATAATTCCCAGATGTTATCTCACAGGTAATCACTACCTGCAGTaGAAGCTAATCACAGCAGGAAAGATTCTGAAAGCTACTTGCCTG +
Preference number: 1 (lower is better)
Translates to: SIIPRCYLTGNHYLQ*KLITAGKILKATCL
Trigger: CAGGCAAGTAGCTTTCAGAATCTTTCCTGCTGTGATTAGCTTTCACTGCAGGTAGTGATTACCTGTGAGATAACATCTGGGAATTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CCA 90 bp CCTGGAAGTTTTTCAGGTTTCATGATCTACATGGGAACCAGAATTTaGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGC +
Preference number: 1 (lower is better)
Translates to: PGSFSGFMIYMGTRI*STSNRFFRIFAFRS
Trigger: GCTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTTCCCATGTAGATCATGAAACCTGAAAAACTTCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR CCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGCTGGGCCACCAGGCTaGAGGCAGCTCAATGCATGC +
Preference number: 2 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPAGPPG*RQLNAC
Trigger: GCATGCATTGAGCTGCCTCCAGCCTGGTGGCCCAGC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR CCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGTTATCACAGCACTTTaGGAGGCTAAGGCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPVITAL*EAKAGR
Trigger: TCTGCCTGCCTTAGCCTCCCAAAGTGCTGTGATAAC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 90 bp GGGAGGAGGCAGAGATTGAGGCAGGTCCCAAGGGTTGCTTCTGGGTaGCTGTTAATGCTGTTTCTTAATCTGGATGCTGGTTCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: GRRQRLRQVPRVASG*LLMLFLNLDAGSLD
Trigger: ATCCAAAGAACCAGCATCCAGATTAAGAAACAGCATTAACAGCAACCCAGAAGCAACCCTTGGGACCTGCCTCAATCTCTGCCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 90 bp TGGGAACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTaGCTTTCAGAAGCAGCCACCCTATTCCCCTGCCCTCAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: WEPEFGVPATGFSGY*LSEAATLFPCPQPE
Trigger: TTCTGGCTGAGGGCAGGGGAATAGGGTGGCTGCTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR TCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGTCTAACTGCCCACGGTaGCTCTGTATTATCTTCAGT +
Preference number: 2 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRSNCPR*LCIIFS
Trigger: ACTGAAGATAATACAGAGTCACCGTGGGCAGTTAGA...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR TCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGCTGGTCTTGAACCCCTaGCCTCAGGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRLVLNP*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGGGTTCAAGACCAG...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR GCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGCCGAGATCACACCACTaGACTCTAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKPRSHH*TLAWAT
Trigger: TGTCGCCCAGGCTAGAGTGCAGTGGTGTGATCTCGG...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR GCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGCACATGTGTGGTTCCTaGGCCTCCTGCTGCATCTCC +
Preference number: 2 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKHMCGS*ASCCIS
Trigger: GGAGATGCAGCAGGAGGCGCAGGAACCACACATGTG...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR TCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGAGTCTTAGGATATTTTaGGATTTGGTAGCGTGCTCA +
Preference number: 2 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRSLRIF*DLVACS
Trigger: TGAGCACGCTACCAAATCTCAAAATATCCTAAGACT...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR TCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGGAGACTCGCTTGAACTaGGAGGCGGAGGTTGCAGTG +
Preference number: 2 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRETRLN*EAEVAV
Trigger: CACTGCAACCTCCGCCTCTCAGTTCAAGCGAGTCTC...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR CCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGGGGCACCTGATAGGCTaGGTACTCCAGCATGCCTTT +
Preference number: 2 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKGHLIG*VLQHAF
Trigger: AAAGGCATGCTGGAGTACCCAGCCTATCAGGTGCCC...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR CCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGTTTGAGAGGCCAAGGTaGGCAGATCGCTTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRFERPR*ADRFSP
Trigger: TGGGCTGAAGCGATCTGCCCACCTTGGCCTCTCAAA...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 90 bp CCTGCAGTGAAAGCTAATCACAGCAGGAAAGATTCTGAAAGCTACTaGCCTGGAAGTTTTTCAGGTTTCATGATCTACATGGGAACCAGA +
Preference number: 2 (lower is better)
Translates to: PAVKANHSRKDSESY*PGSFSGFMIYMGTR
Trigger: TCTGGTTCCCATGTAGATCATGAAACCTGAAAAACTTCCAGGCAAGTAGCTTTCAGAATCTTTCCTGCTGTGATTAGCTTTCACTGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 90 bp CCCGGCCATTCTTGCCTCTTTGAGACTCACTTTTCAAAACTGCTGTaGTTAGATGATCCTTATAAACATGTTGCTGAGGGAAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: PGHSCLFETHFSKLL*LDDPYKHVAEGKKP
Trigger: TGGCTTCTTTCCCTCAGCAACATGTTTATAAGGATCATCTAACAACAGCAGTTTTGAAAAGTGAGTCTCAAAGAGGCAAGAATGGCCGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR GCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGAAGATCTCAGCTTACTaGAACCTCCTCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKKISAY*NLLLPG
Trigger: ACCTGGGAGGAGGAGGTTGCAGTAAGCTGAGATCTT...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 90 bp GCCTGGAAGTTTTTCAGGTTTCATGATCTACATGGGAACCAGAATTaGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: AWKFFRFHDLHGNQN*EYQQQVFQDICFQK
Trigger: CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTTCCCATGTAGATCATGAAACCTGAAAAACTTCCAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR TCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGCTGCTGCATCTCCCATaGACTTGCTCTAAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKLLHLP*TCSKSF
Trigger: AAAGCTTTTAGAGCAAGTTCATGGGAGATGCAGCAG...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGATGCCCGGCCATTCTTaGCTCTTTGAGACTCACTTT +
Preference number: 2 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRMPGHS*LFETHF
Trigger: AAAGTGAGTCTCAAAGAGGCAAGAATGGCCGGGCAT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGAGACACGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCGTGTCT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CCA 72 bp TTCCCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTaGGCCCTCCCAGTCTCCCCACACTCCTCACTAGCA +
Preference number: 3 (lower is better)
Translates to: FPCPQPEAAQYL*ALPVSPHSSLA
Trigger: TGCTAGTGAGGAGTGTGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR CAA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAAGGCAGGCAGATCACTaGAAATCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPRQADH*KSGVRD
Trigger: GTCTCGAACTCCTGATTTCAAGTGATCTGCCTGCCT...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR-3UTR CAA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCACACGAGGTCAGGAGATaGAGATCATCCTGGCTAATA +
Preference number: 3 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPHEVRR*RSSWLI
Trigger: TATTAGCCAGGATGATCTCAATCTCCTGACCTCGTG...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR GCA 72 bp AATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTaGTTTCAGAAGCAGCCACCCTATTCCCCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: NLEYQQQVFQDI*FQKQPPYSPAL
Trigger: GAGGGCAGGGGAATAGGGTGGCTGCTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR TCA 72 bp CCCAGATGTTATCTCACAGGTAATCACTACCTGCAGTaGAAGCTAATCACAGCAGGAAAGATTCTGAAAGCT +
Preference number: 3 (lower is better)
Translates to: PRCYLTGNHYLQ*KLITAGKILKA
Trigger: AGCTTTCAGAATCTTTCCTGCTGTGATTAGCTTTCACTGCAGGTAGTGATTACCTGTGAGATAACATCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CCA 72 bp TTTTCAGGTTTCATGATCTACATGGGAACCAGAATTTaGAGTACCAGCAACAGGTTTTTCAGGATATTTGCT +
Preference number: 3 (lower is better)
Translates to: FSGFMIYMGTRI*STSNRFFRIFA
Trigger: AGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTTCCCATGTAGATCATGAAACCTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCGTGCTGGCAGCAGCCTaGGACCCAGCTGGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSVLAAA*DPAGGA
Trigger: GGCGCCCCCAGCTGGGTCTCAGGCTGCTGCCAGCAC...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGCCCCCATCCTCCACCTaGCACCAGTACCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPPPSST*HQYRPA
Trigger: CGCCGGCCGGTACTGGTGCCAGGTGGAGGATGGGGG...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTCACCGGGGCTCCCATaGGCTTCAGACCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDASPGLP*ASDLRR
Trigger: CCGCCGCAGGTCTGAAGCTCATGGGAGCCCCGGTGA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGTGGCACAGCGCACCCTaGGGCTGTAGTTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPWHSAP*GCSWWQ
Trigger: CTGCCACCAACTACAGCCTCAGGGTGCGCTGTGCCA...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCTGGGCCACCAGGCTaGAGGCAGCTCAATGCATGC +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPAGPPG*RQLNAC
Trigger: GCATGCATTGAGCTGCCTCCAGCCTGGTGGCCCAGC...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCCTCCACACTGCAGTTaGGCTTCACCGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSPPHCS*ASPAAP
Trigger: AGGGGCAGCCGGTGAAGCTCAACTGCAGTGTGGAGG...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCTGGCACAGCGCACCCTaGGGCTGTAGTTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSWHSAP*GCSWWQ
Trigger: CTGCCACCAACTACAGCCTCAGGGTGCGCTGTGCCA...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCCAGCCCTCCGGGGGTaGGTATGTACCGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPPALRG*VCTDSH
Trigger: GTGACTGTCGGTACATACTCACCCCCGGAGGGCTGG...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCCAAGCTGTCCAATGTaGCCTCGATGCGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSPSCPM*PRCARA
Trigger: GGCCCGAGCGCATCGAGGCCACATTGGACAGCTTGG...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCGCTGGGCCACCAGGCTaGAGGCAGCTCAATGCATGC +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCAGPPG*RQLNAC
Trigger: GCATGCATTGAGCTGCCTCCAGCCTGGTGGCCCAGC...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCACCTCCACACTGCAGTTaGGCTTCACCGGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPPPHCS*ASPAAP
Trigger: AGGGGCAGCCGGTGAAGCTCAACTGCAGTGTGGAGG...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCGGAGGAGGCAGAGATTaGGGCAGGTCCCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSGGGRD*GRSQGL
Trigger: CAACCCTTGGGACCTGCCTCAATCTCTGCCTCCTCC...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCTTTCAGGGATTCTCCTaGGCAGCAGGGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSFQGFS*AAGACL
Trigger: GAGGCAGGCCCCTGCTGCTCAGGAGAATCCCTGAAA...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCGGGGGCTGCAGGCAGTaGTTGAAGGTGAACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAGGCRQ*LKVNSG
Trigger: GCCACTGTTCACCTTCAAGCACTGCCTGCAGCCCCC...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCAGGGCCCTGCTGGCCTaGACGGTCATGAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDARALLA*TVMRRD
Trigger: GTCTCTTCTCATGACCGTGCAGGCCAGCAGGGCCCT...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR GCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCGGGTGTGAGCCACCATaGCCGGCCATTCTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPGCEPP*PAILAS
Trigger: AGAGGCAAGAATGGCCGGGCATGGTGGCTCACACCC...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCCACTCAGCTCCGGTTaGCGCAGGCTCACTGGATCT +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAPLSSG*RRLTGS
Trigger: AGATCCAGTGAGCCTGCGGCAACCGGAGCTGAGTGG...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCCCTTCCAGAGGTCCTaGGTAGAGAGGAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPPFQRS*VERRDQ
Trigger: CTGGTCCCTCCTCTCTACCCAGGACCTCTGGAAGGG...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR TCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGTCCCAGGACCTGGTGTaGAAGTTGGCTGTGTCGTCA +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPSQDLV*KLAVSS
Trigger: TGACGACACAGCCAACTTTCACACCAGGTCCTGGGA...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGGGGGCTGCAGGCAGTaGTTGAAGGTGAACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPGGCRQ*LKVNSG
Trigger: GCCACTGTTCACCTTCAAGCACTGCCTGCAGCCCCC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGAACCAAACTCTCCTTTaGCCAACATCCGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPNQTLL*PTSGPG
Trigger: CCCTGGGCCGGATGTTGGGCAAAGGAGAGTTTGGTT...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR GCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTCAGATCGCGCAATTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCLRSRN*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATTGCGCGATCTGAG...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGGGATTACAGGTGCCTaGCACCACTCCTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPGITGA*HHSWLV
Trigger: AACTAGCCAGGAGTGGTGGCAGGCACCTGTAATCCC...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCAGGTGCAGTGGCGTGTaGCTGTGGTCCCAGCTATTC +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPRCSGV*LWSQLF
Trigger: GAATAGCTGGGACCACAGGCACACGCCACTGCACCT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCTGAGAGGCGGAGGTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDALRGGG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAACCTCCGCCTCTCAG...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCAAGCCTACCAAGTGTaGTCCTCCCCTTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAQAYQV*SSPCPS
Trigger: GGAAGGGCAAGGGGAGGAGCACACTTGGTAGGCTTG...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTCACCGGGGCTCCCATaGGCTTCAGACCTTTATCTC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDASPGLP*ASDLYL
Trigger: GAGATAAAGGTCTGAAGCTCATGGGAGCCCCGGTGA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCTGTCCTCTGCCAGCATaGAATTCCGAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPCPLPA*NSEQPG
Trigger: ACCTGGCTGCTCGGAATTGCATGCTGGCAGAGGACA...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR GCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGCTCAGCCTCCCAAAGTaGTGGGATTACAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPLSLPK*WDYKLG
Trigger: ACCCAGCTTGTAATCCCAGCACTTTGGGAGGCTGAG...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCAACCGGATCAGGGTCTaGAGGGGTAGGTTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSNRIRV*RGRLKG
Trigger: CCCCTTTAACCTACCCCTCCAGACCCTGATCCGGTT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCTGGGATTACAAGCTaGGTATGGTGTCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPAGITS*VWCLTP
Trigger: AGGGGTGAGACACCATACCCAGCTTGTAATCCCAGC...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTCACTAGCACATGTGTaGTTCCTGCGCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDASLAHV*FLRLLL
Trigger: CAGCAGGAGGCGCAGGAACCACACATGTGCTAGTGA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCTTTGAGAGGCCAAGGTaGGCAGATCGCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSFERPR*ADRFSP
Trigger: TGGGCTGAAGCGATCTGCCCACCTTGGCCTCTCAAA...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCATCCCAGCTACTCTGGTaGCTGAGGCACAAGAATCGC +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPSQLLW*LRHKNR
Trigger: GCGATTCTTGTGCCTCAGTCACCAGAGTAGCTGGGA...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCAGACAGAGGTTACAGTaGGCCGAGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDARQRLQ*AEITPL
Trigger: CAGTGGTGTGATCTCGGCTCACTGTAACCTCTGTCT...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCAGGAGGAGAGACTCATaGGGCACTGTCAAGACATGG +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDARRRDS*GTVKTW
Trigger: CCATGTCTTGACAGTGCCTCATGAGTCTCTCCTCCT...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAAACCAAACTCTCCTTTaGCCAACATCCGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPNQTLL*PTSGPG
Trigger: CCCTGGGCCGGATGTTGGGCAAAGGAGAGTTTGGTT...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCATGTCCTCTGCCAGCATaGAATTCCGAGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPCPLPA*NSEQPG
Trigger: ACCTGGCTGCTCGGAATTGCATGCTGGCAGAGGACA...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTCTCAGCGTTTTCGATaGCAGCATATGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDASQRFR*QHMASA
Trigger: GGCAGACGCCATATGCTGGCATCGAAAACGCTGAGA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR GCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCTCTCAGCGTTTTCGATaGCAGCATATGGCGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSSQRFR*QHMASA
Trigger: GGCAGACGCCATATGCTGGCATCGAAAACGCTGAGA...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR GCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGGTTCCTGCGCCTCCTaGTGCATCTCCCATGAACTT +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPGSCAS*CISHEL
Trigger: AAGTTCATGGGAGATGCAGCAGGAGGCGCAGGAACC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCTTGTCCAGGCTGGAGTaGCATGGCACAATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPLSRLE*HGTISS
Trigger: AGACGAGATTGTGCCATGGCACTCCAGCCTGGACAA...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCAACTGGTCCAAGTTCTaGACCACAGCCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPNWSKF*TTAPSF
Trigger: GAAGGATGGGGCTGTGGTCCAGAACTTGGACCAGTT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGGGCACCTGATAGGCTaGGTACTCCAGCATGCCTTT +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPGHLIG*VLQHAF
Trigger: AAAGGCATGCTGGAGTACCCAGCCTATCAGGTGCCC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCACAGGCTGGAGTGCCATaGCACAATCTCGTCTCACAG +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPQAGVP*HNLVSQ
Trigger: CTGTGAGACGAGATTGTGCCATGGCACTCCAGCCTG...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCGGCACTGTCAAGACATaGATGGCAGGGGCCAGATAT +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAGTVKT*MAGARY
Trigger: ATATCTGGCCCCTGCCATCCATGTCTTGACAGTGCC...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCGCCTCTTCTTCCACTTaGCCCCAGCAGTGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCASSST*PQQCLF
Trigger: AAACAAGCACTGCTGGGGCCAAGTGGAAGAAGAGGC...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCAGGCACATGCAGAGCTaGTTCCAAACCAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPRHMQS*FQTKPT
Trigger: GGTAGGCTTGGTTTGGAACCAGCTCTGCATGTGCCT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR TCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCTTTAGTTCATCGCTaGTGCCCAAGCTGTCCAATG +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCPLVHR*CPSCPM
Trigger: CATTGGACAGCTTGGGCATCAGCGATGAACTAAAGG...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTCCAGCACTGGTACATaGGATCATACACGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDASSTGT*DHTRPP
Trigger: TGGAGGACGTGTATGATCTCATGTACCAGTGCTGGA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCTCCAGCACTGGTACATaGGATCATACACGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSSSTGT*DHTRPP
Trigger: TGGAGGACGTGTATGATCTCATGTACCAGTGCTGGA...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR TCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCTAGTCTTGAACTTCTaGCCTCGTGATCCACACACC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSLVLNF*PRDPHT
Trigger: GGTGTGTGGATCACGAGGTCAGAAGTTCAAGACTAG...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCCTCCCAGGTTTAAGTaGTTCTCATGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAPPRFK*FSCLSH
Trigger: GTGACTGAGGCATGAGAATCACTTAAACCTGGGAGG...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCAAGTCCCTCCCACCTaGAAAATGCCCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPQVPPT*KMPIFS
Trigger: GGAGAAAATGGGCATTTTTCAGGTGGGAGGGACTTG...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCAAGATCTCAGCTTACTaGAACCTCCTCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPKISAY*NLLLPG
Trigger: ACCTGGGAGGAGGAGGTTGCAGTAAGCTGAGATCTT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGCTGGAGTGCACTGGTaGCATCTCAGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPAGVHW*HLSSLQ
Trigger: TTGCAGTGAACTGAGATGGCACCAGTGCACTCCAGC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGACTGGGATGTACAACTaGTCCAAGTTCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPTGMYN*SKFWTT
Trigger: TGTGGTCCAGAACTTGGACCAGTTGTACATCCCAGT...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGTGCTGCTCGCTGACTaGGATGTACAACTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPVLLAD*DVQLVQ
Trigger: TTGGACCAGTTGTACATCCCAGTCAGCGAGCAGCAC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCATTAGCATGTTGTGGTaGCACGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSISMLW*HVPVVP
Trigger: TGGGACTACAGGCACGTGCCACCACAACATGCTAAT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCTGTCAAGACATGGATaGCAGGGGCCAGATATCTCT +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDALSRHG*QGPDIS
Trigger: AGAGATATCTGGCCCCTGCCATCCATGTCTTGACAG...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCTTGCCGCAGGCTCACTaGATCTTTTCAGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPLPQAH*IFSGIL
Trigger: GAGAATCCCTGAAAAGATCCAGTGAGCCTGCGGCAA...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCACCTGGTGTGAAAGTTaGCTGTGTCGTCACACTGTC +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCTWCES*LCRHTV
Trigger: GACAGTGTGACGACACAGCCAACTTTCACACCAGGT...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCTTTTCCCAGGACCTaGTGTGAAAGTTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCPFPRT*CESWLC
Trigger: ACACAGCCAACTTTCACACCAGGTCCTGGGAAAAGG...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR TCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGCTGCTGCATCTCCCATaGACTTGCTCTAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPLLHLP*TCSKSF
Trigger: AAAGCTTTTAGAGCAAGTTCATGGGAGATGCAGCAG...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCAGCAGGAAAGATTCTaGAAGCTACTTGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCQQERF*KLLAWK
Trigger: CTTCCAGGCAAGTAGCTTTCAGAATCTTTCCTGCTG...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCATCCTGTTAGGCACATaGAGAGCTGGTTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCILLGT*RAGSKP
Trigger: TGGTTTGGAACCAGCTCTGCATGTGCCTAACAGGAT...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCAATTGCTTCAGAGCCTaGCCCACAACCAGTAATCAC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSNCFRA*PTTSNH
Trigger: GTGATTACTGGTTGTGGGGCAGGCTCTGAAGCAATT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCAGGCCAAAGCCTAATTaGCCGTATCTTTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDARPKPN*PYLFGL
Trigger: CAGCCCAAAAAGATACGGGCAATTAGGCTTTGGCCT...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCACTGGGATGTACAACTaGTCCAAGTTCTGGACCACA +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSTGMYN*SKFWTT
Trigger: TGTGGTCCAGAACTTGGACCAGTTGTACATCCCAGT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGCCCCCATCCTCCACCTaGCACCAGTACCGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRPPSST*HQYRPA
Trigger: CGCCGGCCGGTACTGGTGCCAGGTGGAGGATGGGGG...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCCCAAGACAAGAGACTTaGTTAAACCTGGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAPRQET*LNLGDR
Trigger: TCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGG...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTTCTCCAGCCCCAATTaGCGTATGTTTTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAFSSPN*RMFSNL
Trigger: CAAGTTGGAAAACATACGGCAATTGGGGCTGGAGAA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCACCCAAGGGTTGCTTCTaGGTTGCTGTTAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPPKGCF*VAVNAV
Trigger: AACAGCATTAACAGCAACCCAGAAGCAACCCTTGGG...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGAGTCTTAGGATATTTTaGGATTTGGTAGCGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPSLRIF*DLVACS
Trigger: TGAGCACGCTACCAAATCTCAAAATATCCTAAGACT...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAAATCACTACCTGCAGTaGAAGCTAATCACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPNHYLQ*KLITAG
Trigger: TCCTGCTGTGATTAGCTTTCACTGCAGGTAGTGATT...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCGTTTTTCAGGATATTTaGTTTCAGAAGCAGCCACCC +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSVFQDI*FQKQPP
Trigger: GGGTGGCTGCTTCTGAAAGCAAATATCCTGAAAAAC...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCAAACACTTAAAAATTTaGCAGGTGCAGTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSKHLKI*QVQWRV
Trigger: CACACGCCACTGCACCTGGCAAATTTTTAAGTGTTT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCACTTGGCCCCAGCAGTaGTTGTTTATTAATTACCCT +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPTWPQQ*LFINYP
Trigger: AGGGTAATTAATAAACAAGCACTGCTGGGGCCAAGT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCTTGCCCGTATCTTTTTaGGCTGTCATTTTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPLPVSF*AVIFPG
Trigger: ACCAGGAAAAATGACAGCCCAAAAAGATACGGGCAA...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CCA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCGTATGTTTTCCAACTTaGGTCCTGAGTTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAVCFPT*VLSFPR
Trigger: TCTTGGGAAACTCAGGACCCAAGTTGGAAAACATAC...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR TCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGCCAGCCCTCCGGGGGTaGGTATGTACCGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRPALRG*VCTDSH
Trigger: GTGACTGTCGGTACATACTCACCCCCGGAGGGCTGG...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGCCAAGCTGTCCAATGTaGCCTCGATGCGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRPSCPM*PRCARA
Trigger: GGCCCGAGCGCATCGAGGCCACATTGGACAGCTTGG...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCTGCTGTTTCTTAATCTaGATGCTGGTTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCCCFLI*MLVLWI
Trigger: GATCCAAAGAACCAGCATCCAGATTAAGAAACAGCA...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGCACATGTGTGGTTCCTaGGCCTCCTGCTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRHMCGS*ASCCIS
Trigger: GGAGATGCAGCAGGAGGCGCAGGAACCACACATGTG...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGGTTATCACAGCACTTTaGGAGGCTAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRVITAL*EAKAGR
Trigger: TCTGCCTGCCTTAGCCTCCCAAAGTGCTGTGATAAC...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGAGGATTACACGTGCCTaGCACCATACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRRITRA*HHTWLI
Trigger: AATTAGCCAGGTATGGTGGCAGGCACGTGTAATCCT...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 72 bp CAGAGATTGAGGCAGGTCCCAAGGGTTGCTTCTGGGTaGCTGTTAATGCTGTTTCTTAATCTGGATGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRLRQVPRVASG*LLMLFLNLDAG
Trigger: ACCAGCATCCAGATTAAGAAACAGCATTAACAGCAACCCAGAAGCAACCCTTGGGACCTGCCTCAATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGGCAGCACAATACCTGTaGGCCCTCCCAGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKAAQYL*ALPVSP
Trigger: TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGC...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGATGGAGAAGGGTTCCTaGACTCCTCTCCGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKMEKGS*TPLRPH
Trigger: GTGAGGCCGGAGAGGAGTTCAGGAACCCTTCTCCAT...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGAGGGCCCTGCTGGCCTaGACGGTCATGAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRRALLA*TVMRRD
Trigger: GTCTCTTCTCATGACCGTGCAGGCCAGCAGGGCCCT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGCTGGGAGGCAGAGCTTaGAGTGAGCTCAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRLGGRA*SELRSR
Trigger: GCGCGATCTGAGCTCACTGCAAGCTCTGCCTCCCAG...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGACTGGCACATGTAATTaGGATGAACAGTCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRTGTCN*DEQSSN
Trigger: GTTGCTAGACTGTTCATCCCAATTACATGTGCCAGT...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGTCCTGCGCCTCCTGCTaGATCTCCCATGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKSCASC*ISHELA
Trigger: AGCAAGTTCATGGGAGATGCAGCAGGAGGCGCAGGA...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGAACTGGTCCAAGTTCTaGACCACAGCCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKNWSKF*TTAPSF
Trigger: GAAGGATGGGGCTGTGGTCCAGAACTTGGACCAGTT...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGAACCGGATCAGGGTCTaGAGGGGTAGGTTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRNRIRV*RGRLKG
Trigger: CCCCTTTAACCTACCCCTCCAGACCCTGATCCGGTT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGAGTGTCCTGAGTAGCTaGGATTACAGACACGCGCCA +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKSVLSS*DYRHAP
Trigger: TGGCGCGTGTCTGTAATCCCAGCTACTCAGGACACT...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGGTAGTCCCAGCTAATTaGGAGTGTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKVVPAN*ECEAGG
Trigger: TCCTCCTGCCTCACACTCCCAATTAGCTGGGACTAC...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGCTCAGCCTCACAAAGTaGTGGGATTACAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKLSLTK*WDYRHQ
Trigger: CTGATGCCTGTAATCCCAGCACTTTGTGAGGCTGAG...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGCACTCTTGTCCAGGCTaGAGTGCCATGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRHSCPG*SAMAQS
Trigger: AGATTGTGCCATGGCACTCCAGCCTGGACAAGAGTG...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGCCTTTAGTTCATCGCTaGTGCCCAAGCTGTCCAATG +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRPLVHR*CPSCPM
Trigger: CATTGGACAGCTTGGGCATCAGCGATGAACTAAAGG...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGACACTGTCAAAGGCTTaGCCAAACCGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRTLSKA*PNRVSF
Trigger: GAAAGAGACGCGGTTTGGGCAAGCCTTTGACAGTGT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGGCAGGTCCCAAGGGTTaGTTCTGGGTTGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRAGPKG*FWVAVN
Trigger: ATTAACAGCAACCCAGAAGCAACCCTTGGGACCTGC...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGATGCCCGGCCATTCTTaGCTCTTTGAGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKMPGHS*LFETHF
Trigger: AAAGTGAGTCTCAAAGAGGCAAGAATGGCCGGGCAT...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGGCCACTGTGCCCAGCTaGATATTTGCATTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKATVPS*IFAFSK
Trigger: TTTTGAAAATGCAAATATTCAGCTGGGCACAGTGGC...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp AACCAGAATTTGGAGTACCAGCAACAGGTTTTTCAGGATATTTGCTTTCAGAAGCCATTCTTGCCTCTTTaGGACTCACTTTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: NQNLEYQQQVFQDICFQKPFLPL*DSLFKT
Trigger: AGTTTTGAAAAGTGAGTCTCAAAGAGGCAAGAATGG...CTTCTGAAAGCAAATATCCTGAAAAACCTGTTGCTGGTACTCCAAATTCTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR GCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGAAATACACGCCACTGTaGCCAGCTGAATATTTGCAT +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRKYTPL*PAEYLH
Trigger: ATGCAAATATTCAGCTGGGCACAGTGGCGTGTATTT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGATGGGAACCAGAATTTaGAGTACCAGCAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRMGTRI*STSNRF
Trigger: AAACCTGTTGCTGGTACTCCAAATTCTGGTTCCCAT...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
3UTR CAA 72 bp AAAGCTAATCACAGCAGGAAAGATTCTGAAAGCTACTaGCCTGGAAGTTTTTCAGGTTTCATGATCTACATG +
Preference number: 4 (lower is better)
Translates to: KANHSRKDSESY*PGSFSGFMIYM
Trigger: CATGTAGATCATGAAACCTGAAAAACTTCCAGGCAAGTAGCTTTCAGAATCTTTCCTGCTGTGATTAGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR TCA 90 bp GATGAACAGTCTAGCAACCAAAATAGATATGGGAGTTTAGATAGATCAATGAGGTGTGAAAATCCTTTTTaGTCCAGAGTCTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DEQSSNQNRYGSLDRSMRCENPF*SRVSLF
Trigger: AAAGAGAGAGACTCTGGATCAAAAAGGATTTTCACA...CCTCATTGATCTATCTAAACTCCCATATCTATTTTGGTTGCTAGACTGTTCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCACTCAGCTCCGGTaGCCGCAGGCTCACTGGATC +
Preference number: 5 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPATQLR*PQAHWI
Trigger: GATCCAGTGAGCCTGCGGCAACCGGAGCTGAGTGGC...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CAA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCCCTCCACACTGCAGTaGAGCTTCACCGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSPSTLQ*SFTGCP
Trigger: GGGGCAGCCGGTGAAGCTCAACTGCAGTGTGGAGGG...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CAA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCGAACCAAACTCTCCTTaGCCCAACATCCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAEPNSP*PNIRPR
Trigger: CCTGGGCCGGATGTTGGGCAAAGGAGAGTTTGGTTC...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CAA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGATGGAGTCTCACTCTaGTCCAGGCTGGAGTGCCAT +
Preference number: 5 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPDGVSL*SRLECH
Trigger: ATGGCACTCCAGCCTGGACAAGAGTGAGACTCCATC...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCATCACGAGGGTGGCCTaGCCCACAGACATCCTGTTA +
Preference number: 5 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPITRVA*PTDILL
Trigger: TAACAGGATGTCTGTGGGCAAGGCCACCCTCGTGAT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS CCA 90 bp AGAGAGGAGGGACCAGCCACTCAGCTCCGGTTGCCGCAGGCTCACTaGATCTTTTCAGGGATTCTCCTGAGCAGCAGGGGCCTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: REEGPATQLRLPQAH*IFSGILLSSRGLPL
Trigger: AAGAGGCAGGCCCCTGCTGCTCAGGAGAATCCCTGAAAAGATCCAGTGAGCCTGCGGCAACCGGAGCTGAGTGGCTGGTCCCTCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CAA 90 bp GGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCGACACTGTCAAAGGCTaGCCCAAACCGCGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GLSQPAQWPPEPAKWPRCDTVKG*PKPRLF
Trigger: AAAGAGACGCGGTTTGGGCAAGCCTTTGACAGTGTC...GCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263798.8
ENST00000559066.5
CDS-3UTR CAA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCGGTAGCGTGCTCAGATaGTGGGTATGGAGAAGGGTT +
Preference number: 5 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAGSVLR*WVWRRV
Trigger: AACCCTTCTCCATACCCACAATCTGAGCACGCTACC...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGTGTCATTTTTCCTGGTaGCTTCCCCTGCTTCTACCC +
Preference number: 5 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPCHFSW*LPLLLP
Trigger: GGGTAGAAGCAGGGGAAGCAACCAGGAAAAATGACA...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS GCA 90 bp ACAAATAAGCAACCAGTAGGGCACAGCTGCTCACACCTGGGAGAGTaGCTGGGCTGTGGAGAGAGGTTGCCTCTCCCTGCCACGAAGGCC +
Preference number: 5 (lower is better)
Translates to: TNKQPVGHSCSHLGE*LGCGERLPLPATKA
Trigger: GGCCTTCGTGGCAGGGAGAGGCAACCTCTCTCCACAGCCCAGGCACTCTCCCAGGTGTGAGCAGCTGTGCCCTACTGGTTGCTTATTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560227.1
CDS CCA 90 bp ACAGGATACGAGGCTTGCTTCCGAGGGCAAGGGCGGCAGCTCTGCTaGGCAAACTTGATGAGTTCAGCCTGCCCCCACTTCTGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: TGYEACFRGQGRQLC*ANLMSSACPHFWKV
Trigger: GACCTTCCAGAAGTGGGGGCAGGCTGAACTCATCAAGTTTGCCCAGCAGAGCTGCCGCCCTTGCCCTCGGAAGCAAGCCTCGTATCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 90 bp CTCAGATACCCAACTCCAACTGGTAGGGTCTTCCGACATCTGGAGTaGGCCTACAGCCTGGACAACCAGGCCCCACAGAGCAGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LRYPTPTGRVFRHLE*AYSLDNQAPQSSGA
Trigger: TGCCCCACTGCTCTGTGGGGCCTGGTTGTCCAGGCTGTAGGCCCACTCCAGATGTCGGAAGACCCTACCAGTTGGAGTTGGGTATCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS-3UTR CAA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCAGGCAGGCAGATCACTaGAAATCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSRQADH*KSGVRD
Trigger: GTCTCGAACTCCTGATTTCAAGTGATCTGCCTGCCT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS GCA 90 bp GAAACAGGATACGAGGCTTGCTTCCGAGGGCAAGGGCGGCAGCTCTaGTGGGCAAACTTGATGAGTTCAGCCTGCCCCCACTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: ETGYEACFRGQGRQL*WANLMSSACPHFWK
Trigger: CTTCCAGAAGTGGGGGCAGGCTGAACTCATCAAGTTTGCCCAGCAGAGCTGCCGCCCTTGCCCTCGGAAGCAAGCCTCGTATCCTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS-3UTR CAA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCACGAGGTCAGGAGATaGAGATCATCCTGGCTAATA +
Preference number: 5 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSHEVRR*RSSWLI
Trigger: TATTAGCCAGGATGATCTCAATCTCCTGACCTCGTG...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGGTTTTTCAGGATATTaGCTTTCAGAAGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: LGWGQTGLSQPAQWPPEPGFSGY*LSEAAT
Trigger: GGTGGCTGCTTCTGAAAGCAAATATCCTGAAAAACC...CGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGTATGTTTTCCAACTaGGGTCCTGAGTTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSRMFSN*GPEFPK
Trigger: CTTGGGAAACTCAGGACCCAAGTTGGAAAACATACG...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS TCA 90 bp GGCCAGGCCACTTGGCAGAACAGGGTCCAGTCCCAGATGGATGCTTaGAGCTTGTTGCTCAAGCAACGGAAACAGACTGCACCCCACAGG +
Preference number: 5 (lower is better)
Translates to: GQATWQNRVQSQMDA*SLLLKQRKQTAPHR
Trigger: CCTGTGGGGTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTGGCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 90 bp GAGGGTGGCCTTGCCCACAGACATCCTGTTAGGCACATGCAGAGCTaGTTCCAAACCAAGCCTACCAAGTGTGCTCCTCCCCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: EGGLAHRHPVRHMQS*FQTKPTKCAPPLAL
Trigger: AAGGGCAAGGGGAGGAGCACACTTGGTAGGCTTGGTTTGGAACCAGCTCTGCATGTGCCTAACAGGATGTCTGTGGGCAAGGCCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS CCA 90 bp CCCCTGCTGGCCAGGCCACTTGGCAGAACAGGGTCCAGTCCCAGATaGATGCTTGAAGCTTGTTGCTCAAGCAACGGAAACAGACTGCAC +
Preference number: 5 (lower is better)
Translates to: PLLARPLGRTGSSPR*MLEACCSSNGNRLH
Trigger: GTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTGGCCTGGCCAGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS-3UTR CAA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCAGCCAAGACAAGAGACTaGATTAAACCTGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPAKTRD*IKPGRQ
Trigger: CTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGC...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CCCTGCCCTCAGCCAGAAGCAGCACAATACCTGTGGGCCCTCCCAGTCTCCCCACATGGGAACCAGAATTaGGAGTACCAGCAACAGGTT +
Preference number: 5 (lower is better)
Translates to: PCPQPEAAQYLWALPVSPHGNQN*EYQQQV
Trigger: AACCTGTTGCTGGTACTCCAAATTCTGGTTCCCATG...TGGGGAGACTGGGAGGGCCCACAGGTATTGTGCTGCTTCTGGCTGAGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp GTCTGGGCTGGGGTCAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCAGGGTTGCTTCTGGGTaGCTGTTAATGCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VWAGVRRGLVSQLSGHQSRVASG*LLMLFL
Trigger: AAGAAACAGCATTAACAGCAACCCAGAAGCAACCCT...GCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTGACCCCAGCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCGAGTTTCCCAAGATCTaGGTAATCCCCAGGTTTTAC +
Preference number: 5 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAEFPKI*VIPRFY
Trigger: GTAAAACCTGGGGATTACCAAGATCTTGGGAAACTC...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CAA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTTTCTCCAGCCCCAATaGCCGTATGTTTTCCAACTT +
Preference number: 5 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAFLQPQ*PYVFQL
Trigger: AAGTTGGAAAACATACGGCAATTGGGGCTGGAGAAA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS GCA 90 bp GTAATCACGAGGGTGGCCTTGCCCACAGACATCCTGTTAGGCACATaGAGAGCTGGTTCCAAACCAAGCCTACCAAGTGTGCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VITRVALPTDILLGT*RAGSKPSLPSVLLP
Trigger: GGGGAGGAGCACACTTGGTAGGCTTGGTTTGGAACCAGCTCTGCATGTGCCTAACAGGATGTCTGTGGGCAAGGCCACCCTCGTGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS GCA 90 bp TGCTGGCCAGGCCACTTGGCAGAACAGGGTCCAGTCCCAGATGGATaGTTGAAGCTTGTTGCTCAAGCAACGGAAACAGACTGCACCCCA +
Preference number: 5 (lower is better)
Translates to: CWPGHLAEQGPVPDG*LKLVAQATETDCTP
Trigger: TGGGGTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTGGCCTGGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS-3UTR CAA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGCCCTCCACACTGCAGTaGAGCTTCACCGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRPSTLQ*SFTGCP
Trigger: GGGGCAGCCGGTGAAGCTCAACTGCAGTGTGGAGGG...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCTGGATGCTGGTTCTTaGGATCTGTTTGTGAAAATC +
Preference number: 5 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPLDAGS*DLFVKI
Trigger: GATTTTCACAAACAGATCCAAAGAACCAGCATCCAG...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCAAAACACTTAAAAATTaGCCAGGTGCAGTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAKTLKN*PGAVAC
Trigger: ACACGCCACTGCACCTGGCAAATTTTTAAGTGTTTT...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp GGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCCGATGCCTGGCCCCAGCAGTGCTaGTTTATTAATTACCCTAAT +
Preference number: 5 (lower is better)
Translates to: GLVSQLSGHQSRPNGPDAWPQQC*FINYPN
Trigger: ATTAGGGTAATTAATAAACAAGCACTGCTGGGGCCA...GGCATCGGGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS-3UTR CAA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGGCTCAGATCGCGCAATaGCACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRAQIAQ*HSSLGD
Trigger: GTCGCCCAGGCTGGAGTGCAATTGCGCGATCTGAGC...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CAGACGGGGCTTAGTCAGCCAGCTCAGTGGCCACCAGAGCCGGCCAAATGGCCCATCCTTATAAACATGTaGCTGAGGGAAAGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: QTGLSQPAQWPPEPAKWPILINM*LRERSQ
Trigger: TTGGCTTCTTTCCCTCAGCAACATGTTTATAAGGAT...GGGCCATTTGGCCGGCTCTGGTGGCCACTGAGCTGGCTGACTAAGCCCCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS GCA 90 bp CTTGGCAGAACAGGGTCCAGTCCCAGATGGATGCTTGAAGCTTGTTaGTCAAGCAACGGAAACAGACTGCACCCCACAGGTTGTGGATCC +
Preference number: 5 (lower is better)
Translates to: LGRTGSSPRWMLEAC*SSNGNRLHPTGCGS
Trigger: GGATCCACAACCTGTGGGGTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 90 bp GGAAACAGACTGCACCCCACAGGTTGTGGATCCCAGTTGGTCCCTTaGTTCTCAGATACCCAACTCCAACTGGTAGGGTCTTCCGACATC +
Preference number: 5 (lower is better)
Translates to: GNRLHPTGCGSQLVP*FSDTQLQLVGSSDI
Trigger: GATGTCGGAAGACCCTACCAGTTGGAGTTGGGTATCTGAGAACCAAGGGACCAACTGGGATCCACAACCTGTGGGGTGCAGTCTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 90 bp AGCTTGTTGCTCAAGCAACGGAAACAGACTGCACCCCACAGGTTGTaGATCCCAGTTGGTCCCTTGGTTCTCAGATACCCAACTCCAACT +
Preference number: 5 (lower is better)
Translates to: SLLLKQRKQTAPHRL*IPVGPLVLRYPTPT
Trigger: AGTTGGAGTTGGGTATCTGAGAACCAAGGGACCAACTGGGATCCACAACCTGTGGGGTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS-3UTR CAA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGTGTAATCTCCGCACTTaGAGAGGCCAAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRCNLRT*RGQGGQ
Trigger: CTGCCCACCTTGGCCTCTCAAAGTGCGGAGATTACA...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS-3UTR CAA 90 bp CCAACTACTCGGGAAGCCAAGACAAGAGACTTGATTAAACCTGGGAGACAGAGGGACACTGTCAAAGGCTaGCCCAAACCGCGTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PTTREAKTRDLIKPGRQRDTVKG*PKPRLF
Trigger: AAAGAGACGCGGTTTGGGCAAGCCTTTGACAGTGTC...CCTCTGTCTCCCAGGTTTAATCAAGTCTCTTGTCTTGGCTTCCCGAGTAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263798.8
CDS CCA 72 bp GCACAGCTGCTCACACCTGGGAGAGTGCCTGGGCTGTaGAGAGAGGTTGCCTCTCCCTGCCACGAAGGCCCT +
Preference number: 6 (lower is better)
Translates to: AQLLTPGRVPGL*REVASPCHEGP
Trigger: AGGGCCTTCGTGGCAGGGAGAGGCAACCTCTCTCCACAGCCCAGGCACTCTCCCAGGTGTGAGCAGCTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560227.1
CDS CCA 72 bp GGCCTACAGCCTGGACAACCAGGCCCCACAGAGCAGTaGGGCAGCCCAGCTTCTACTGAGTTCTCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: GLQPGQPGPTEQ*GSPASTEFSAA
Trigger: TGCAGCGGAGAACTCAGTAGAAGCTGGGCTGCCCCACTGCTCTGTGGGGCCTGGTTGTCCAGGCTGTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS GCA 72 bp TACGAGGCTTGCTTCCGAGGGCAAGGGCGGCAGCTCTaGTGGGCAAACTTGATGAGTTCAGCCTGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: YEACFRGQGRQL*WANLMSSACPH
Trigger: GTGGGGGCAGGCTGAACTCATCAAGTTTGCCCAGCAGAGCTGCCGCCCTTGCCCTCGGAAGCAAGCCTCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 72 bp GGACCAGCCACTCAGCTCCGGTTGCCGCAGGCTCACTaGATCTTTTCAGGGATTCTCCTGAGCAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GPATQLRLPQAH*IFSGILLSSRG
Trigger: GCCCCTGCTGCTCAGGAGAATCCCTGAAAAGATCCAGTGAGCCTGCGGCAACCGGAGCTGAGTGGCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS CAA 72 bp CCACTGACTTCAGGCTGTGGAAACAGGATACGAGGCTaGCTTCCGAGGGCAAGGGCGGCAGCTCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PLTSGCGNRIRG*LPRARAAALLG
Trigger: GCCCAGCAGAGCTGCCGCCCTTGCCCTCGGAAGCAAGCCTCGTATCCTGTTTCCACAGCCTGAAGTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 90 bp GAGGCTTGCTTCCGAGGGCAAGGGCGGCAGCTCTGCTGGGCAAACTaGATGAGTTCAGCCTGCCCCCACTTCTGGAAGGTCCCACAGGTA +
Preference number: 6 (lower is better)
Translates to: EACFRGQGRQLCWAN*MSSACPHFWKVPQV
Trigger: TACCTGTGGGACCTTCCAGAAGTGGGGGCAGGCTGAACTCATCAAGTTTGCCCAGCAGAGCTGCCGCCCTTGCCCTCGGAAGCAAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 72 bp TTCCGAGGGCAAGGGCGGCAGCTCTGCTGGGCAAACTaGATGAGTTCAGCCTGCCCCCACTTCTGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: FRGQGRQLCWAN*MSSACPHFWKV
Trigger: GACCTTCCAGAAGTGGGGGCAGGCTGAACTCATCAAGTTTGCCCAGCAGAGCTGCCGCCCTTGCCCTCGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS TCA 72 bp AGGCCCCACAGAGCAGTGGGGCAGCCCAGCTTCTACTaGGTTCTCCGCTGCAGAGGTATAGTCACCAGCAGA +
Preference number: 6 (lower is better)
Translates to: RPHRAVGQPSFY*VLRCRGIVTSR
Trigger: TCTGCTGGTGACTATACCTCTGCAGCGGAGAACTCAGTAGAAGCTGGGCTGCCCCACTGCTCTGTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 72 bp GATACCCAACTCCAACTGGTAGGGTCTTCCGACATCTaGAGTGGGCCTACAGCCTGGACAACCAGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: DTQLQLVGSSDI*SGPTAWTTRPH
Trigger: GTGGGGCCTGGTTGTCCAGGCTGTAGGCCCACTCCAGATGTCGGAAGACCCTACCAGTTGGAGTTGGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 72 bp GAGCCTGCCCCACAACCAGTAATCACGAGGGTGGCCTaGCCCACAGACATCCTGTTAGGCACATGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: EPAPQPVITRVA*PTDILLGTCRA
Trigger: AGCTCTGCATGTGCCTAACAGGATGTCTGTGGGCAAGGCCACCCTCGTGATTACTGGTTGTGGGGCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS CAA 90 bp TGGCCAGGCCACTTGGCAGAACAGGGTCCAGTCCCAGATGGATGCTaGAAGCTTGTTGCTCAAGCAACGGAAACAGACTGCACCCCACAG +
Preference number: 6 (lower is better)
Translates to: WPGHLAEQGPVPDGC*KLVAQATETDCTPQ
Trigger: CTGTGGGGTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTGGCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 72 bp CTTGCCCACAGACATCCTGTTAGGCACATGCAGAGCTaGTTCCAAACCAAGCCTACCAAGTGTGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LAHRHPVRHMQS*FQTKPTKCAPP
Trigger: GGGAGGAGCACACTTGGTAGGCTTGGTTTGGAACCAGCTCTGCATGTGCCTAACAGGATGTCTGTGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS CCA 72 bp CTGCACCCCACAGGTTGTGGATCCCAGTTGGTCCCTTaGTTCTCAGATACCCAACTCCAACTGGTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: LHPTGCGSQLVP*FSDTQLQLVGS
Trigger: AGACCCTACCAGTTGGAGTTGGGTATCTGAGAACCAAGGGACCAACTGGGATCCACAACCTGTGGGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 72 bp GCCAGGCCACTTGGCAGAACAGGGTCCAGTCCCAGATaGATGCTTGAAGCTTGTTGCTCAAGCAACGGAAAC +
Preference number: 6 (lower is better)
Translates to: ARPLGRTGSSPR*MLEACCSSNGN
Trigger: GTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTGGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 90 bp CGGAAACAGACTGCACCCCACAGGTTGTGGATCCCAGTTGGTCCCTaGGTTCTCAGATACCCAACTCCAACTGGTAGGGTCTTCCGACAT +
Preference number: 6 (lower is better)
Translates to: RKQTAPHRLWIPVGP*VLRYPTPTGRVFRH
Trigger: ATGTCGGAAGACCCTACCAGTTGGAGTTGGGTATCTGAGAACCAAGGGACCAACTGGGATCCACAACCTGTGGGGTGCAGTCTGTTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS GCA 72 bp ACAGGGTCCAGTCCCAGATGGATGCTTGAAGCTTGTTaGTCAAGCAACGGAAACAGACTGCACCCCACAGGT +
Preference number: 6 (lower is better)
Translates to: TGSSPRWMLEAC*SSNGNRLHPTG
Trigger: ACCTGTGGGGTGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS GCA 72 bp GGCCACTTGGCAGAACAGGGTCCAGTCCCAGATGGATaGTTGAAGCTTGTTGCTCAAGCAACGGAAACAGAC +
Preference number: 6 (lower is better)
Translates to: GHLAEQGPVPDG*LKLVAQATETD
Trigger: GTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 72 bp CTCAAGCAACGGAAACAGACTGCACCCCACAGGTTGTaGATCCCAGTTGGTCCCTTGGTTCTCAGATACCCA +
Preference number: 6 (lower is better)
Translates to: LKQRKQTAPHRL*IPVGPLVLRYP
Trigger: TGGGTATCTGAGAACCAAGGGACCAACTGGGATCCACAACCTGTGGGGTGCAGTCTGTTTCCGTTGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 90 bp TCAAGCAACGGAAACAGACTGCACCCCACAGGTTGTGGATCCCAGTaGGTCCCTTGGTTCTCAGATACCCAACTCCAACTGGTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: SSNGNRLHPTGCGSQ*VPWFSDTQLQLVGS
Trigger: AGACCCTACCAGTTGGAGTTGGGTATCTGAGAACCAAGGGACCAACTGGGATCCACAACCTGTGGGGTGCAGTCTGTTTCCGTTGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 90 bp CACCTTAGACACATCTTCCATGCTGCCCCCTTAGGCATGGCAGATTaGGACAGCTCTTCTTGCAGTAAGAGAGGAGACTGGGGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: HLRHIFHAAPLGMAD*DSSSCSKRGDWGWR
Trigger: TCTCCACCCCCAGTCTCCTCTCTTACTGCAAGAAGAGCTGTCCAAATCTGCCATGCCTAAGGGGGCAGCATGGAAGATGTGTCTAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 72 bp CACTTGGCAGAACAGGGTCCAGTCCCAGATGGATGCTaGAAGCTTGTTGCTCAAGCAACGGAAACAGACTGC +
Preference number: 6 (lower is better)
Translates to: HLAEQGPVPDGC*KLVAQATETDC
Trigger: GCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CAA 72 bp CACATCTTCCATGCTGCCCCCTTAGGCATGGCAGATTaGGACAGCTCTTCTTGCAGTAAGAGAGGAGACTGG +
Preference number: 6 (lower is better)
Translates to: HIFHAAPLGMAD*DSSSCSKRGDW
Trigger: CCAGTCTCCTCTCTTACTGCAAGAAGAGCTGTCCAAATCTGCCATGCCTAAGGGGGCAGCATGGAAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS TCA 72 bp ACTTGGCAGAACAGGGTCCAGTCCCAGATGGATGCTTaGAGCTTGTTGCTCAAGCAACGGAAACAGACTGCA +
Preference number: 6 (lower is better)
Translates to: TWQNRVQSQMDA*SLLLKQRKQTA
Trigger: TGCAGTCTGTTTCCGTTGCTTGAGCAACAAGCTTCAAGCATCCATCTGGGACTGGACCCTGTTCTGCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560992.1
CDS CCA 72 bp GGAGGAGAGACTCATGAGGCACTGTCAAGACATGGATaGCAGGGGCCAGATATCTCTGTCTCTGTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: GGETHEALSRHG*QGPDISVSVSF
Trigger: GAAAGAAACAGAGACAGAGATATCTGGCCCCTGCCATCCATGTCTTGACAGTGCCTCATGAGTCTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559066.5
CDS CCA 72 bp GCTTCTACCCCTTTTCCCAGGACCTGGTGTGAAAGTTaGCTGTGTCGTCACACTGTCCAGTCAAACATTAGC +
Preference number: 6 (lower is better)
Translates to: ASTPFPRTWCES*LCRHTVQSNIS
Trigger: GCTAATGTTTGACTGGACAGTGTGACGACACAGCCAACTTTCACACCAGGTCCTGGGAAAAGGGGTAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559066.5