RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TXNRD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000197763

Ensembl transcript IDs: ENST00000383572.3, ENST00000518740.5, ENST00000523403.3, ENST00000524230.9

Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCATAACGGGGCTCCAAGCTAAGGCGTCAAGGAAGCAGTCCCACTaGTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCTG +
Preference number: 1 (lower is better)
Translates to: LITGLQAKASRKQSH*FSLSARPQGRCPLL
Trigger: CAGCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCCTTGACGCCTTAGCTTGGAGCCCCGTTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CCA 90 bp GGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTaGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCA +
Preference number: 1 (lower is better)
Translates to: GEWCHSKVFPREAQS*LARVSLGSPHNGAP
Trigger: TGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR GCA 90 bp CCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTaGTGTCCTCTTTCCTTGTCTACTTTCTCATCTAAGTGTCGTAAG +
Preference number: 1 (lower is better)
Translates to: PTASRCQQDHKADAH*CPLSLSTFSSKCRK
Trigger: CTTACGACACTTAGATGAGAAAGTAGACAAGGAAAGAGGACAGCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR TCA 90 bp GCAGCCCACAGCAGCCCACAGACACTGTTCACCAGTGAGCATGTGTaGATTCTAGGCCCACGCACTAGAAAACCACTACTTTATAGCATT +
Preference number: 1 (lower is better)
Translates to: AAHSSPQTLFTSEHV*ILGPRTRKPLLYSI
Trigger: AATGCTATAAAGTAGTGGTTTTCTAGTGCGTGGGCCTAGAATTCACACATGCTCACTGGTGAACAGTGTCTGTGGGCTGCTGTGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
3UTR GCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTaGCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCG +
Preference number: 1 (lower is better)
Translates to: GIKTIATRKANLGEW*HSKVFPREAQSWLA
Trigger: CGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CCA 90 bp TCCTTGTCTACTTTCTCATCTAAGTGTCGTAAGACAGCCCTGCACTaGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTT +
Preference number: 1 (lower is better)
Translates to: SLSTFSSKCRKTALH*SLSNRAAVMSTGSF
Trigger: AAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGAGAAAGTAGACAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CAA 90 bp AGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTaGGCTCACCTCATAACGGGGCTCCAAGCTAAGGCGTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: RSFRGKLSPGLRESA*AHLITGLQAKASRK
Trigger: CTTCCTTGACGCCTTAGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CAA 90 bp AATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTaGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAGCT +
Preference number: 2 (lower is better)
Translates to: NGATQRSFRGKLSPG*RESALAHLITGLQA
Trigger: AGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR CCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAAAGACAGCCCTGCACTaGTCCCTGAGTAACAGAGCA +
Preference number: 2 (lower is better)
Translates to: LSPGLRESALAHLITGLQKTALH*SLSNRA
Trigger: TGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTT...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR GCA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCAAGGCAGATGCCCACTaGTGTCCTCTTTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: SFRGKLSPGLRESALAHLKADAH*CPLSLS
Trigger: AGACAAGGAAAGAGGACAGCAGTGGGCATCTGCCTT...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR GCA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCAAGGCAGATGCCCACTaGTGTCCTCTTTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: ATQRSFRGKLSPGLRESAKADAH*CPLSLS
Trigger: AGACAAGGAAAGAGGACAGCAGTGGGCATCTGCCTT...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR TCA 90 bp GGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGACAGAGCAGCTGTCATaGGCACAGGCTCATTTTATC +
Preference number: 2 (lower is better)
Translates to: GEWCHSKVFPREAQSWLATEQLS*AQAHFI
Trigger: GATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGT...CGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR CCA 90 bp TTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTAAGACAGCCCTGCACTaGTCCCTGAGTAACAGAGCA +
Preference number: 2 (lower is better)
Translates to: LGEWCHSKVFPREAQSWLKTALH*SLSNRA
Trigger: TGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTT...AAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR TCA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTAGAGAAATGAGAATATaGCAAGGAGAACTAAACAGC +
Preference number: 2 (lower is better)
Translates to: VFPREAQSWLARVSLGSPREMRI*QGELNS
Trigger: GCTGTTTAGTTCTCCTTGTCATATTCTCATTTCTCT...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR GCA 90 bp ACCCTACACAGTGTGTACAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGAACTTAGGTGAATGGTaGCACTCAAAGGTCTTTCCG +
Preference number: 2 (lower is better)
Translates to: TLHSVYSFLLMQTAIQMQNLGEW*HSKVFP
Trigger: CGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT...CTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTGTACACACTGTGTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
3UTR-3UTR CCA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGAGGGAAGCTCAGTCCTaGCTTGCGAGAGTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: IKTIATRKANLGEWCHSKREAQS*LARVSL
Trigger: AAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR-3UTR TCA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAAGAGAAATGAGAATATaGCAAGGAGAACTAAACAGC +
Preference number: 2 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRREMRI*QGELNS
Trigger: GCTGTTTAGTTCTCCTTGTCATATTCTCATTTCTCT...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CCA 72 bp TGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTaGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAAC +
Preference number: 3 (lower is better)
Translates to: CHSKVFPREAQS*LARVSLGSPHN
Trigger: GTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CCA 72 bp ACTTTCTCATCTAAGTGTCGTAAGACAGCCCTGCACTaGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACA +
Preference number: 3 (lower is better)
Translates to: TFSSKCRKTALH*SLSNRAAVMST
Trigger: TGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR GCA 72 bp ACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTaGCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCC +
Preference number: 3 (lower is better)
Translates to: TIATRKANLGEW*HSKVFPREAQS
Trigger: GGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CCA 72 bp AAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATaGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAG +
Preference number: 3 (lower is better)
Translates to: KTIATRKANLGE*CHSKVFPREAQ
Trigger: CTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCCCCGGCTGCGCTCGATaGGGCCCACGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SFRGKLSPGLRESALAHLPGCAR*GPRGGG
Trigger: GCCGCCACCTCGTGGGCCTCATCGAGCGCAGCCGGG...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTTCTCGCTCTCGCTCCTaGCCCGGCCGGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VFPREAQSWLARVSLGSPSRSRS*PGRACS
Trigger: TGAGCAGGCCCGGCCGGGCCAGGAGCGAGAGCGAGA...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAATGAGGCCCACGAGGTaGCGGCGCAGCTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: LSPGLRESALAHLITGLQMRPTR*RRSSSR
Trigger: CCGCGAGGAGCTGCGCCGCCACCTCGTGGGCCTCAT...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGAGGGGCGGCGAACGCTaGCCTCGCTGGCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: REAQSWLARVSLGSPHNGRGGER*PRWPLS
Trigger: TGAGAGTGGCCAGCGAGGGCAGCGTTCGCCGCCCCT...CCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR CCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGGGCCCGAGCGGCGGTTaGGGGCATCGCCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQGPSGG*GHRPPF
Trigger: GAAAGGCGGGCGATGCCCCCAACCGCCGCTCGGGCC...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR GCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAATGGCCCGGCCGGGCCTaGTCACAAACCGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: LSPGLRESALAHLITGLQWPGRA*SQTETQ
Trigger: CTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCA...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp GAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGATCTCGCTCTCGCTCCTaGCCCGGCCGGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EWCHSKVFPREAQSWLARSRSRS*PGRACS
Trigger: TGAGCAGGCCCGGCCGGGCCAGGAGCGAGAGCGAGA...TCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp GAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAATGAGGCCCACGAGGTaGCGGCGCAGCTCCTCGCGG +
Preference number: 4 (lower is better)
Translates to: EWCHSKVFPREAQSWLARMRPTR*RRSSSR
Trigger: CCGCGAGGAGCTGCGCCGCCACCTCGTGGGCCTCAT...TCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGCTGGCCCGAGCGGCGGTTaGGGGCATCGCCCGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSKCRKTALHWSLSNRAAGPSGG*GHRPPF
Trigger: GAAAGGCGGGCGATGCCCCCAACCGCCGCTCGGGCC...AGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CAA 72 bp CGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTaGGCTCACCTCATAACGGGGCTCCAAGCTAAGGCG +
Preference number: 4 (lower is better)
Translates to: RGKLSPGLRESA*AHLITGLQAKA
Trigger: CGCCTTAGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCCCCGGCTGCGCTCGATaGGGCCCACGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSNRAAVMSTGSFYPRAFPGCAR*GPRGGG
Trigger: GCCGCCACCTCGTGGGCCTCATCGAGCGCAGCCGGG...GAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCCCCCAGGATGTGCCCTaGGGTGACGGGACAACAAAG +
Preference number: 4 (lower is better)
Translates to: SSPTASRCQQDHKADAHCPQDVP*GDGTTK
Trigger: CTTTGTTGTCCCGTCACCTCAGGGCACATCCTGGGG...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTAGCTCAGTCCTGGCTTaGGAGAGTCAGCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VFPREAQSWLARVSLGSPSSVLA*ESQPWL
Trigger: GAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCT...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGAAGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACAGCTCAGTCCTGGCTTaGGAGAGTCAGCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSSPTASRCQQDHKADAHSSVLA*ESQPWL
Trigger: GAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCT...GTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GCCTTGGCTCACCTCATAACGGGGCTCCAAGCTAAGGCGTCAAGGAAGCAGTCCCAAGACCCCAGGATGTaGCCTGAGGTGACGGGACAA +
Preference number: 4 (lower is better)
Translates to: ALAHLITGLQAKASRKQSQDPRM*PEVTGQ
Trigger: TTGTCCCGTCACCTCAGGGCACATCCTGGGGTCTTG...GGACTGCTTCCTTGACGCCTTAGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAAGCTTCCTTCGCACATaGAAGGCCTCCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: LSPGLRESALAHLITGLQSFLRT*KASRTT
Trigger: GGTGGTTCTGGAGGCCTTTCATGTGCGAAGGAAGCT...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGAAGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACGCCAGCCAGAAACCCTaGACACTCCAGGGCAACATA +
Preference number: 4 (lower is better)
Translates to: GSSPTASRCQQDHKADAHASQKP*TLQGNI
Trigger: TATGTTGCCCTGGAGTGTGCAGGGTTTCTGGCTGGC...GTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCAGGGAAGCTCAGTCCTaGCTTGCGAGAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ATQRSFRGKLSPGLRESAREAQS*LARVSL
Trigger: AAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGAACGCTGCCCTCGCTaGCCACTCTCACCACCCGCG +
Preference number: 4 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRERCPR*PLSPPA
Trigger: CGCGGGTGGTGAGAGTGGCCAGCGAGGGCAGCGTTC...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp AGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGCCTCAGCAGCCTTTCTaGGTGATGTCTAGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: REAQSWLARVSLGSPHNGPQQPF*VMSSPD
Trigger: GTCAGGACTAGACATCACTCAGAAAGGCTGCTGAGG...CCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCCACGGAGAAGGATTaGGCGTACCATAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: REAQSWLARVSLGSPHNGATEKD*AYHNCD
Trigger: GTCACAGTTATGGTACGCTCAATCCTTCTCCGTGGC...CCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
3UTR CAA 72 bp ACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTaGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGG +
Preference number: 4 (lower is better)
Translates to: TQRSFRGKLSPG*RESALAHLITG
Trigger: CCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCTCCCCACATGTGGGGTaGATTCCAATGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: SFRGKLSPGLRESALAHLSPHVG*IPMVSS
Trigger: TGATGACACCATTGGAATTCACCCCACATGTGGGGA...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GGAAGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTCCCCACATGTGGGGTaGATTCCAATGGTGTCATCA +
Preference number: 4 (lower is better)
Translates to: GSSPTASRCQQDHKADAHSPHVG*IPMVSS
Trigger: TGATGACACCATTGGAATTCACCCCACATGTGGGGA...GTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGGCCCCAAAAAGTCTCTaGGCTAGCAGCTTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: NGATQRSFRGKLSPGLREAPKSL*ASSLPD
Trigger: GTCAGGCAAGCTGCTAGCTCAGAGACTTTTTGGGGC...CTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGAAGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGGCCTTTCACCCGTTaGTATGACAAACTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSPTASRCQQDHKADAHWPFTR*YDKLCS
Trigger: GCTGCACAGTTTGTCATAGCAACGGGTGAAAGGCCA...GTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCTGGCCTTTCACCCGTTaGTATGACAAACTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSPTASRCQQDHKADAHCWPFTR*YDKLCS
Trigger: GCTGCACAGTTTGTCATAGCAACGGGTGAAAGGCCA...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGGCCAGCCAGAAACCCTaGACACTCCAGGGCAACATA +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQASQKP*TLQGNI
Trigger: TATGTTGCCCTGGAGTGTGCAGGGTTTCTGGCTGGC...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR GCA 90 bp GGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGTCTGAGCTAGCAGCTTaGCTGACTGTATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: GEWCHSKVFPREAQSWLASELAA*LTVWRQ
Trigger: CTGTCGCCATACAGTCAGGCAAGCTGCTAGCTCAGA...CGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp TGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCAGACAGCTATCCAAATaGAGCCCACAGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: CHSKVFPREAQSWLARVSRQLSK*SPQQPT
Trigger: TGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCT...GCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp GGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGCAGCCTTTCTGAGTaGTGTCTAGTCCTGACGACT +
Preference number: 4 (lower is better)
Translates to: GEWCHSKVFPREAQSWLASSLSE*CLVLTT
Trigger: AGTCGTCAGGACTAGACATCACTCAGAAAGGCTGCT...CGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAACAGAGCAGCTGTCATaGGCACAGGCTCATTTTATC +
Preference number: 4 (lower is better)
Translates to: LSPGLRESALAHLITGLQTEQLS*AQAHFI
Trigger: GATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGT...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGACAGTAGCTCTTGCTaGAGATCACCACCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGEWCHSKVFPREAQSWLDSSSC*RSPPGC
Trigger: GCAGCCGGGTGGTGATCTTCAGCAAGAGCTACTGTC...AAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGCTGACAGTAGCTCTTGCTaGAGATCACCACCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSKCRKTALHWSLSNRAADSSSC*RSPPGC
Trigger: GCAGCCGGGTGGTGATCTTCAGCAAGAGCTACTGTC...AGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCCCCAGTTTAGAGAGCTaGTGTGGTTCTGAATCGCTT +
Preference number: 4 (lower is better)
Translates to: SFRGKLSPGLRESALAHLPSLES*CGSESL
Trigger: AAGCGATTCAGAACCACATCAGCTCTCTAAACTGGG...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGAGCAGCCTTTCTGAGTaGTGTCTAGTCCTGACGACT +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQSSLSE*CLVLTT
Trigger: AGTCGTCAGGACTAGACATCACTCAGAAAGGCTGCT...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp CAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCCCAAAAGGGCAGCCTaGTGCATCAATTTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: QRSFRGKLSPGLRESALAPKRAA*CINFLG
Trigger: TCCTAAGAAATTGATGCATCAGGCTGCCCTTTTGGG...AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GCCTTGGCTCACCTCATAACGGGGCTCCAAGCTAAGGCGTCAAGGAAGCAGTCCTTTCACCCGTTGCTATaGCAAACTGTGCAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: ALAHLITGLQAKASRKQSFHPLL*QTVQQY
Trigger: ATACTGCTGCACAGTTTGTCATAGCAACGGGTGAAA...GGACTGCTTCCTTGACGCCTTAGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTTCACCCGTTGCTATaGCAAACTGTGCAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: ATQRSFRGKLSPGLRESAFHPLL*QTVQQY
Trigger: ATACTGCTGCACAGTTTGTCATAGCAACGGGTGAAA...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GGAAGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTTTCAGCTTTCCAGGTaGACCTTTCTCCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: GSSPTASRCQQDHKADAHFQLSR*TFLQLL
Trigger: CAACAGTTGGAGAAAGGTTCACCTGGAAAGCTGAAA...GTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGCTGCCCCAAAAAGTCTCTaGGCTAGCAGCTTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SSKCRKTALHWSLSNRAAAPKSL*ASSLPD
Trigger: GTCAGGCAAGCTGCTAGCTCAGAGACTTTTTGGGGC...AGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCAACTTAGGTGAATGGTaGCACTCAAAGGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: ATQRSFRGKLSPGLRESANLGEW*HSKVFP
Trigger: CGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp TGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCGGAACCCACTTTTTCTaGCATTTCTTGGTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: CHSKVFPREAQSWLARVSGTHFF*HFLVEA
Trigger: GGCTTCGACCAAGAAATGGCAGAAAAAGTGGGTTCC...GCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGCTAGGGAAGCTCAGTCCTaGCTTGCGAGAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSKCRKTALHWSLSNRAAREAQS*LARVSL
Trigger: AAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT...AGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTTTGGGCACAGTTTTCTaGTTAGTGATTTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: VFPREAQSWLARVSLGSPLGTVF*LVISDS
Trigger: GCTGTCAGAAATCACTAATCAGAAAACTGTGCCCAA...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGTGTAACAAACCACTCTaGTATGCCTGGAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: REAQSWLARVSLGSPHNGCNKPL*YAWKVW
Trigger: CCAAACTTTCCAGGCATATCAGAGTGGTTTGTTACA...CCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATTCTCCATAGGAATTaGCATAGGCCACAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SFRGKLSPGLRESALAHLILHRN*HRPQPF
Trigger: AAAAGGCTGTGGCCTATGTCAATTCCTATGGAGAAT...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AACTTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGGCCACGGAGAAGGATTaGGCGTACCATAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: NLGEWCHSKVFPREAQSWATEKD*AYHNCD
Trigger: GTCACAGTTATGGTACGCTCAATCCTTCTCCGTGGC...CCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCGAACCATCACAGGTATaGATTTCCGTAGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SFRGKLSPGLRESALAHLEPSQV*ISVGTS
Trigger: TGAAGTTCCTACGGAAATTCATACCTGTGATGGTTC...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAGAACCATCACAGGTATaGATTTCCGTAGGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LSPGLRESALAHLITGLQEPSQV*ISVGTS
Trigger: TGAAGTTCCTACGGAAATTCATACCTGTGATGGTTC...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGTGTGAGGGTGAAGCATaGGTCAGCGTTTTGACAGTA +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQCEGEA*VSVLTV
Trigger: TACTGTCAAAACGCTGACTCATGCTTCACCCTCACA...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR GCA 90 bp CAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTAACTTAGGTGAATGGTaGCACTCAAAGGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: QRSFRGKLSPGLRESALANLGEW*HSKVFP
Trigger: CGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT...AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCATGGCCCGGCCGGGCCTaGTCACAAACCGAAACGCAG +
Preference number: 4 (lower is better)
Translates to: GIKTIATRKANLGEWCHSWPGRA*SQTETQ
Trigger: CTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCA...TGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp TCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGCTTCTGAGCTAGCAGCTTaGCTGACTGTATGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SSKCRKTALHWSLSNRAASELAA*LTVWRQ
Trigger: CTGTCGCCATACAGTCAGGCAAGCTGCTAGCTCAGA...AGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCAAGTGTTGTTCTCTCTaGCAGCTACTGTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: SSPTASRCQQDHKADAHCKCCSL*QLLSIQ
Trigger: TTGAATGGACAGTAGCTGGCAGAGAGAACAACACTT...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp AATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGGCACTTCTTGAACCCTaGCCCCATCATCAACTTGAT +
Preference number: 4 (lower is better)
Translates to: NGATQRSFRGKLSPGLREALLEP*PHHQLD
Trigger: ATCAAGTTGATGATGGGGCCAGGGTTCAAGAAGTGC...CTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGGCACTTCTTGAACCCTaGCCCCATCATCAACTTGAT +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQALLEP*PHHQLD
Trigger: ATCAAGTTGATGATGGGGCCAGGGTTCAAGAAGTGC...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR CCA 90 bp CAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTTATGCCTGGAAAGTTTaGTCACATCCACCTACATGC +
Preference number: 4 (lower is better)
Translates to: QRSFRGKLSPGLRESALAYAWKV*SHPPTC
Trigger: GCATGTAGGTGGATGTGACCAAACTTTCCAGGCATA...AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCTTTCTTTCCCAAAATaGCAGCTTCCTTCGCACATG +
Preference number: 4 (lower is better)
Translates to: QRSFRGKLSPGLRESALALSFPK*QLPSHM
Trigger: CATGTGCGAAGGAAGCTGCCATTTTGGGAAAGAAAG...AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGTTTTCTGCCATTTCTTaGTCGAAGCCACGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQFSAIS*SKPRRR
Trigger: CCTTCTCCGTGGCTTCGACCAAGAAATGGCAGAAAA...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp GGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGGCCCCATCATCAACTTaGTCAAGTTCCAAGACATTA +
Preference number: 4 (lower is better)
Translates to: GEWCHSKVFPREAQSWLAAPSST*SSSKTL
Trigger: TAATGTCTTGGAACTTGATCAAGTTGATGATGGGGC...CGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp TTCTCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCATCTGACAGCACTTCTTaGACCCTGGCCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: FSSKCRKTALHWSLSNRASDSTS*TLAPSS
Trigger: TGATGATGGGGCCAGGGTTCAAGAAGTGCTGTCAGA...TGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGCCCCAGGATGTGCCCTaGGGTGACGGGACAACAAAG +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLPQDVP*GDGTTK
Trigger: CTTTGTTGTCCCGTCACCTCAGGGCACATCCTGGGG...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGCTACACCTCCCCACATGTaGGGTGAATTCCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: SSKCRKTALHWSLSNRAATPPHM*GEFQWC
Trigger: ACACCATTGGAATTCACCCCACATGTGGGGAGGTGT...AGCTGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGCTTTCTTTCCCAAAATaGCAGCTTCCTTCGCACATG +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQLSFPK*QLPSHM
Trigger: CATGTGCGAAGGAAGCTGCCATTTTGGGAAAGAAAG...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR CCA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCCCTATCACCCGATCATaGTCGAATTTATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: ATQRSFRGKLSPGLRESAPITRS*SNLLQI
Trigger: AATCTGCAATAAATTCGACCATGATCGGGTGATAGG...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GCCTTGGCTCACCTCATAACGGGGCTCCAAGCTAAGGCGTCAAGGAAGCAGTCCAGAGAAATGAGAATATaGCAAGGAGAACTAAACAGC +
Preference number: 4 (lower is better)
Translates to: ALAHLITGLQAKASRKQSREMRI*QGELNS
Trigger: GCTGTTTAGTTCTCCTTGTCATATTCTCATTTCTCT...GGACTGCTTCCTTGACGCCTTAGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGCCCCATCATCAACTTaGTCAAGTTCCAAGACATTA +
Preference number: 4 (lower is better)
Translates to: EWCHSKVFPREAQSWLARAPSST*SSSKTL
Trigger: TAATGTCTTGGAACTTGATCAAGTTGATGATGGGGC...TCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACAGTGTAACAAACCACTCTaGTATGCCTGGAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: QLPANADSYPNAAHSSPQCNKPL*YAWKVW
Trigger: CCAAACTTTCCAGGCATATCAGAGTGGTTTGTTACA...CTGTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp TACAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACGAGCTGATGTGGTTCTaGATCGCTTTTGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: YSFLLMQTAIQMQPTAAHELMWF*IAFVIV
Trigger: GACAATGACAAAAGCGATTCAGAACCACATCAGCTC...GTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp TTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTCCCAGTTTAGAGAGCTaGTGTGGTTCTGAATCGCTT +
Preference number: 4 (lower is better)
Translates to: LGEWCHSKVFPREAQSWLPSLES*CGSESL
Trigger: AAGCGATTCAGAACCACATCAGCTCTCTAAACTGGG...AAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGTTTGGTCCAAGAATATaGAATCCTATCACCCGATCA +
Preference number: 4 (lower is better)
Translates to: LKGLSEGSSVLACESQPWFGPRI*NPITRS
Trigger: TGATCGGGTGATAGGATTTCATATTCTTGGACCAAA...CCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAACATTTCATTGCAGCTaGAAATCCTTGGGTAACCTC +
Preference number: 4 (lower is better)
Translates to: EWCHSKVFPREAQSWLARTFHCS*KSLGNL
Trigger: GAGGTTACCCAAGGATTTGCAGCTGCAATGAAATGT...TCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGCAAGACCCCAGGATGTaGCCTGAGGTGACGGGACAA +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLQDPRM*PEVTGQ
Trigger: TTGTCCCGTCACCTCAGGGCACATCCTGGGGTCTTG...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AACTTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGGGAACCCACTTTTTCTaGCATTTCTTGGTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: NLGEWCHSKVFPREAQSWGTHFF*HFLVEA
Trigger: GGCTTCGACCAAGAAATGGCAGAAAAAGTGGGTTCC...CCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCAAGACAGCCCTGCACTaGTCCCTGAGTAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSNRAAVMSTGSFYPRAFKTALH*SLSNRA
Trigger: TGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTT...GAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp CTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCATAACGGGGCTCCAAAGACATATGGCACATTaGTCTGTTCCACATCATTTA +
Preference number: 4 (lower is better)
Translates to: LSPGLRESALAHLITGLQRHMAH*SVPHHL
Trigger: TAAATGATGTGGAACAGACCAATGTGCCATATGTCT...TTGGAGCCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp GGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGCCTATCACCCGATCATaGTCGAATTTATTGCAGATT +
Preference number: 4 (lower is better)
Translates to: GEWCHSKVFPREAQSWLAPITRS*SNLLQI
Trigger: AATCTGCAATAAATTCGACCATGATCGGGTGATAGG...CGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGGTATGGCGACAGGAGTaGGCTCTGGCTTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLVWRQE*ALAYPP
Trigger: TGGAGGATAAGCCAGAGCTCACTCCTGTCGCCATAC...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTTCACATCCACCTACATaGACTTTATTCACGAAAATA +
Preference number: 4 (lower is better)
Translates to: VFPREAQSWLARVSLGSPSHPPT*TLFTKI
Trigger: TATTTTCGTGAATAAAGTGCATGTAGGTGGATGTGA...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGACCACCACTAATGTTTTaGCAGGGCAATAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRPPLMF*QGNKAE
Trigger: CTCTGCCTTATTGCCCTGGCAAAACATTAGTGGTGG...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTAACCTCACCGGCGTTTaGTCCAAGAATATGAAATCC +
Preference number: 4 (lower is better)
Translates to: LGEWCHSKVFPREAQSWLNLTGV*SKNMKS
Trigger: GGATTTCATATTCTTGGACCAAACGCCGGTGAGGTT...AAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGACCAGTGAGCATGTGTaGATTCTAGGCCCACGCACT +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLTSEHV*ILGPRT
Trigger: AGTGCGTGGGCCTAGAATTCACACATGCTCACTGGT...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR CCA 90 bp AGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTAAAGACAGCCCTGCACTaGTCCCTGAGTAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SNRAAVMSTGSFYPRAFLKTALH*SLSNRA
Trigger: TGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTT...TAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCATCTGACAGCACTTCTTaGACCCTGGCCCCATCATCA +
Preference number: 4 (lower is better)
Translates to: GIKTIATRKANLGEWCHSSDSTS*TLAPSS
Trigger: TGATGATGGGGCCAGGGTTCAAGAAGTGCTGTCAGA...TGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTTCAGCTTTCCAGGTaGACCTTTCTCCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: LSNRAAVMSTGSFYPRAFFQLSR*TFLQLL
Trigger: CAACAGTTGGAGAAAGGTTCACCTGGAAAGCTGAAA...GAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AACTTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGTTTGGTCCAAGAATATaGAATCCTATCACCCGATCA +
Preference number: 4 (lower is better)
Translates to: NLGEWCHSKVFPREAQSWFGPRI*NPITRS
Trigger: TGATCGGGTGATAGGATTTCATATTCTTGGACCAAA...CCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGAAGGCAGATGCCCACTaGTGTCCTCTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLKADAH*CPLSLS
Trigger: AGACAAGGAAAGAGGACAGCAGTGGGCATCTGCCTT...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAGCAGCTGCAAATCCTTaGGTAACCTCACCGGCGTTT +
Preference number: 4 (lower is better)
Translates to: GIKTIATRKANLGEWCHSAAANP*VTSPAF
Trigger: AAACGCCGGTGAGGTTACCCAAGGATTTGCAGCTGC...TGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCTAACTTAGGTGAATaGTGCCACTCAAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRANLGE*CHSKVF
Trigger: AAAGACCTTTGAGTGGCACCATTCACCTAAGTTAGC...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp ACCCTACACAGTGTGTACAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGTATGCCTGGAAAGTTTaGTCACATCCACCTACATGC +
Preference number: 4 (lower is better)
Translates to: TLHSVYSFLLMQTAIQMQYAWKV*SHPPTC
Trigger: GCATGTAGGTGGATGTGACCAAACTTTCCAGGCATA...CTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTGTACACACTGTGTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR TCA 90 bp CTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTGGGCACAGTTTTCTaGTTAGTGATTTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LSNRAAVMSTGSFYPRAFLGTVF*LVISDS
Trigger: GCTGTCAGAAATCACTAATCAGAAAACTGTGCCCAA...GAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGAGCTTCCTTCGCACATaGAAGGCCTCCAGAACCACC +
Preference number: 4 (lower is better)
Translates to: IKTIATRKANLGEWCHSKSFLRT*KASRTT
Trigger: GGTGGTTCTGGAGGCCTTTCATGTGCGAAGGAAGCT...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp CTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCATTCTCCATAGGAATTaGCATAGGCCACAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LSNRAAVMSTGSFYPRAFILHRN*HRPQPF
Trigger: AAAAGGCTGTGGCCTATGTCAATTCCTATGGAGAAT...GAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGTATGGCGACAGGAGTaGGCTCTGGCTTATCCTCCA +
Preference number: 4 (lower is better)
Translates to: IKTIATRKANLGEWCHSKVWRQE*ALAYPP
Trigger: TGGAGGATAAGCCAGAGCTCACTCCTGTCGCCATAC...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGCAGATGCCCACTaGTGTCCTCTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GIKTIATRKANLGEWCHSKADAH*CPLSLS
Trigger: AGACAAGGAAAGAGGACAGCAGTGGGCATCTGCCTT...TGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGGAGCCCACATTTCATTaGAGCTGCAAATCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLEPTFH*SCKSLG
Trigger: ACCCAAGGATTTGCAGCTGCAATGAAATGTGGGCTC...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AACTTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGTGCTATGACAAACTGTaGAGCAGTATAATAAGTCTC +
Preference number: 4 (lower is better)
Translates to: NLGEWCHSKVFPREAQSWCYDKL*SSIISL
Trigger: GAGACTTATTATACTGCTGCACAGTTTGTCATAGCA...CCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGCCACCACTAATGTTTTaGCAGGGCAATAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLPPLMF*QGNKAE
Trigger: CTCTGCCTTATTGCCCTGGCAAAACATTAGTGGTGG...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp AAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGTCACACCTCCCCACATGTaGGGTGAATTCCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: KTIATRKANLGEWCHSKVTPPHM*GEFQWC
Trigger: ACACCATTGGAATTCACCCCACATGTGGGGAGGTGT...GACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp AGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATTTTCTGCCATTTCTTaGTCGAAGCCACGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SNRAAVMSTGSFYPRAFLFSAIS*SKPRRR
Trigger: CCTTCTCCGTGGCTTCGACCAAGAAATGGCAGAAAA...TAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGTCACAGAGCAGCTGTCATaGGCACAGGCTCATTTTATC +
Preference number: 4 (lower is better)
Translates to: KTIATRKANLGEWCHSKVTEQLS*AQAHFI
Trigger: GATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGT...GACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGTCCCCAAAAGGGCAGCCTaGTGCATCAATTTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: KTIATRKANLGEWCHSKVPKRAA*CINFLG
Trigger: TCCTAAGAAATTGATGCATCAGGCTGCCCTTTTGGG...GACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGGAGCTGATGTGGTTCTaGATCGCTTTTGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLELMWF*IAFVIV
Trigger: GACAATGACAAAAGCGATTCAGAACCACATCAGCTC...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCACTACATTTACACAAGTaGCACCAAGACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GIKTIATRKANLGEWCHSLHLHK*HQDPRM
Trigger: CATCCTGGGGTCTTGGTGGCACTTGTGTAAATGTAG...TGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAAGACATATGGCACATTaGTCTGTTCCACATCATTTA +
Preference number: 4 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRRHMAH*SVPHHL
Trigger: TAAATGATGTGGAACAGACCAATGTGCCATATGTCT...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGAGAGAAATGCTACATTTACACAAGTaGCACCAAGACCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VMSTGSFYPRAFLSLREMLHLHK*HQDPRM
Trigger: CATCCTGGGGTCTTGGTGGCACTTGTGTAAATGTAG...CATTTCTCTCAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp CTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTCACATCCACCTACATaGACTTTATTCACGAAAATA +
Preference number: 4 (lower is better)
Translates to: LSNRAAVMSTGSFYPRAFSHPPT*TLFTKI
Trigger: TATTTTCGTGAATAAAGTGCATGTAGGTGGATGTGA...GAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CCA 90 bp AAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGTCGCTAACTTAGGTGAATaGTGCCACTCAAAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KTIATRKANLGEWCHSKVANLGE*CHSKVF
Trigger: AAAGACCTTTGAGTGGCACCATTCACCTAAGTTAGC...GACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGACATTTCATTGCAGCTaGAAATCCTTGGGTAACCTC +
Preference number: 4 (lower is better)
Translates to: IKTIATRKANLGEWCHSKTFHCS*KSLGNL
Trigger: GAGGTTACCCAAGGATTTGCAGCTGCAATGAAATGT...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp GGGATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCATGCTATGACAAACTGTaGAGCAGTATAATAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GIKTIATRKANLGEWCHSCYDKL*SSIISL
Trigger: GAGACTTATTATACTGCTGCACAGTTTGTCATAGCA...TGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR GCA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGAAGTGTTGTTCTCTCTaGCAGCTACTGTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: IKTIATRKANLGEWCHSKKCCSL*QLLSIQ
Trigger: TTGAATGGACAGTAGCTGGCAGAGAGAACAACACTT...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR TCA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGAGAGAAATGAGAATATaGCAAGGAGAACTAAACAGC +
Preference number: 4 (lower is better)
Translates to: IKTIATRKANLGEWCHSKREMRI*QGELNS
Trigger: GCTGTTTAGTTCTCCTTGTCATATTCTCATTTCTCT...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 90 bp CTCCTGGCCCGGCCGGGCCTGCTCACAAACCGAAACGCAGGCGGCTaGGGCGCCGGGACGGGGCCTGAGGGGCGGCGAACGCTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: LLARPGLLTNRNAGG*GAGTGPEGRRTLPS
Trigger: CGAGGGCAGCGTTCGCCGCCCCTCAGGCCCCGTCCCGGCGCCGCAGCCGCCTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCAGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 90 bp GAGCGGCGGTTGGGGGCATCGCCCGCCTTTCCCGGCCCGGGCGACTaGGGCGGCGACCGCTCCAGAGTCTCGCTCTCGCTCCTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: ERRLGASPAFPGPGD*GGDRSRVSLSLLAR
Trigger: CCGGGCCAGGAGCGAGAGCGAGACTCTGGAGCGGTCGCCGCCGCAGTCGCCCGGGCCGGGAAAGGCGGGCGATGCCCCCAACCGCCGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 90 bp GCGACCGCTCCAGAGTCTCGCTCTCGCTCCTGGCCCGGCCGGGCCTaGTCACAAACCGAAACGCAGGCGGCTGCGGCGCCGGGACGGGGC +
Preference number: 5 (lower is better)
Translates to: ATAPESRSRSWPGRA*SQTETQAAAAPGRG
Trigger: GCCCCGTCCCGGCGCCGCAGCCGCCTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCAGGAGCGAGAGCGAGACTCTGGAGCGGTCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 90 bp GCTCACAAACCGAAACGCAGGCGGCTGCGGCGCCGGGACGGGGCCTaGGGGGCGGCGAACGCTGCCCTCGCTGGCCACTCTCACCACCCG +
Preference number: 5 (lower is better)
Translates to: AHKPKRRRLRRRDGA*GAANAALAGHSHHP
Trigger: CGGGTGGTGAGAGTGGCCAGCGAGGGCAGCGTTCGCCGCCCCTCAGGCCCCGTCCCGGCGCCGCAGCCGCCTGCGTTTCGGTTTGTGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS CCA 90 bp CGGGCGACTGCGGCGGCGACCGCTCCAGAGTCTCGCTCTCGCTCCTaGCCCGGCCGGGCCTGCTCACAAACCGAAACGCAGGCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: RATAAATAPESRSRS*PGRACSQTETQAAA
Trigger: CGCAGCCGCCTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCAGGAGCGAGAGCGAGACTCTGGAGCGGTCGCCGCCGCAGTCGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp GCCTTGGCTCACCTCATAACGGGGCTCCAAGCTAAGGCGTCAAGGAAGCAGTCCTGGCCCGAGCGGCGGTaGGGGGCATCGCCCGCCTTT +
Preference number: 5 (lower is better)
Translates to: ALAHLITGLQAKASRKQSWPERR*GASPAF
Trigger: AAAGGCGGGCGATGCCCCCAACCGCCGCTCGGGCCA...GGACTGCTTCCTTGACGCCTTAGCTTGGAGCCCCGTTATGAGGTGAGCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp CAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTTGGCCCGAGCGGCGGTaGGGGGCATCGCCCGCCTTT +
Preference number: 5 (lower is better)
Translates to: QRSFRGKLSPGLRESALAWPERR*GASPAF
Trigger: AAAGGCGGGCGATGCCCCCAACCGCCGCTCGGGCCA...AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 90 bp AGCCCCACACTCAATCGTGCCCTCACAGGCTCCAGTGGCATCTGCTaGTCAGCTTTCAGCTCCGGCTGCCCAAGTCTCCTCTCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SPTLNRALTGSSGIC*SAFSSGCPSLLSLR
Trigger: CCTGAGCGAGAGGAGACTTGGGCAGCCGGAGCTGAAAGCTGAGCAGCAGATGCCACTGGAGCCTGTGAGGGCACGATTGAGTGTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 90 bp GCAGCAAGCCAGCCCCACACTCAATCGTGCCCTCACAGGCTCCAGTaGCATCTGCTGCTCAGCTTTCAGCTCCGGCTGCCCAAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: AASQPHTQSCPHRLQ*HLLLSFQLRLPKSP
Trigger: AGGAGACTTGGGCAGCCGGAGCTGAAAGCTGAGCAGCAGATGCCACTGGAGCCTGTGAGGGCACGATTGAGTGTGGGGCTGGCTTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 90 bp TCCGGCTGCCCAAGTCTCCTCTCGCTCAGGTCCCTCATCCAGCTCTaGCTTCCAGAGGTCAGCTGCTGCAGTCTCCTATCCTCCTATTCT +
Preference number: 5 (lower is better)
Translates to: SGCPSLLSLRSLIQL*LPEVSCCSLLSSYS
Trigger: AGAATAGGAGGATAGGAGACTGCAGCAGCTGACCTCTGGAAGCCAGAGCTGGATGAGGGACCTGAGCGAGAGGAGACTTGGGCAGCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCTTGCGAGAGTCAGCCTaGGCTCACCTCATAACGGGG +
Preference number: 5 (lower is better)
Translates to: SSPTASRCQQDHKADAHCLRESA*AHLITG
Trigger: CCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAA...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCAAGCTCAGTCCTGGCTaGCGAGAGTCAGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: SSPTASRCQQDHKADAHCKLSPG*RESALA
Trigger: AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTT...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CCA 90 bp AAAACCTTGTCTCCATGTTCCAGAGAGGACGCCTCTGCAGTGGTGTaGGAGCAGCAGCAAGCCAGCCCCACACTCAATCGTGCCCTCACA +
Preference number: 5 (lower is better)
Translates to: KTLSPCSREDASAVV*EQQQASPTLNRALT
Trigger: TGTGAGGGCACGATTGAGTGTGGGGCTGGCTTGCTGCTGCTCCCACACCACTGCAGAGGCGTCCTCTCTGGAACATGGAGACAAGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 90 bp CCCTCTGGCTGCCCAGGCTCTCCAGAAAGACATTTTGCCTTCTCCTaGGTGGAGGGTACAGATCTGGCTTGCAGTGCCCTGGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: PSGCPGSPERHFAFS*VEGTDLACSALEIF
Trigger: GAAGATCTCCAGGGCACTGCAAGCCAGATCTGTACCCTCCACCCAGGAGAAGGCAAAATGTCTTTCTGGAGAGCCTGGGCAGCCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp CTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGTTGCGAGAGTCAGCCTaGGCTCACCTCATAACGGGG +
Preference number: 5 (lower is better)
Translates to: LKGLSEGSSVLACESQPWLRESA*AHLITG
Trigger: CCCCGTTATGAGGTGAGCCAAGGCTGACTCTCGCAA...CCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 90 bp TTGACCTTTCCCCTCTGGCTGCCCAGGCTCTCCAGAAAGACATTTTaGCTTCTCCTGGGTGGAGGGTACAGATCTGGCTTGCAGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LTFPLWLPRLSRKTF*LLLGGGYRSGLQCP
Trigger: AGGGCACTGCAAGCCAGATCTGTACCCTCCACCCAGGAGAAGGCAAAATGTCTTTCTGGAGAGCCTGGGCAGCCAGAGGGGAAAGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp AATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGAAGCTCAGTCCTGGCTaGCGAGAGTCAGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: NGATQRSFRGKLSPGLREKLSPG*RESALA
Trigger: AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTT...CTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CCA 90 bp CTGGCTGCCCAGGCTCTCCAGAAAGACATTTTGCCTTCTCCTGGGTaGAGGGTACAGATCTGGCTTGCAGTGCCCTGGAGATCTTCAGTA +
Preference number: 5 (lower is better)
Translates to: LAAQALQKDILPSPG*RVQIWLAVPWRSSV
Trigger: TACTGAAGATCTCCAGGGCACTGCAAGCCAGATCTGTACCCTCCACCCAGGAGAAGGCAAAATGTCTTTCTGGAGAGCCTGGGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 90 bp CTCCACTTTCCCAGGGCCAGGATAGGTTTCTTGACCTTTCCCCTCTaGCTGCCCAGGCTCTCCAGAAAGACATTTTGCCTTCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LHFPRARIGFLTFPL*LPRLSRKTFCLLLG
Trigger: ACCCAGGAGAAGGCAAAATGTCTTTCTGGAGAGCCTGGGCAGCCAGAGGGGAAAGGTCAAGAAACCTATCCTGGCCCTGGGAAAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCCCAGCCAAATTTCCTaGAGTCACATAATGCCTGCC +
Preference number: 5 (lower is better)
Translates to: VFPREAQSWLARVSLGSPPSQIS*SHIMPA
Trigger: GGCAGGCATTATGTGACTCAAGGAAATTTGGCTGGG...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp TGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCCCAGCCAAATTTCCTaGAGTCACATAATGCCTGCC +
Preference number: 5 (lower is better)
Translates to: CHSKVFPREAQSWLARVSPSQIS*SHIMPA
Trigger: GGCAGGCATTATGTGACTCAAGGAAATTTGGCTGGG...GCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCTTTTTCTGCCATTTCTaGGTCGAAGCCACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SSPTASRCQQDHKADAHCFFCHF*VEATEK
Trigger: CTTCTCCGTGGCTTCGACCAAGAAATGGCAGAAAAA...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCCCAAGCCTATTTTCCTaGTACAGGAGTCACGACCAA +
Preference number: 5 (lower is better)
Translates to: SFRGKLSPGLRESALAHLPSLFS*YRSHDQ
Trigger: TTGGTCGTGACTCCTGTACAAGGAAAATAGGCTTGG...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCGGCCCCATCATCAACTaGATCAAGTTCCAAGACATT +
Preference number: 5 (lower is better)
Translates to: ATQRSFRGKLSPGLRESAGPIIN*IKFQDI
Trigger: AATGTCTTGGAACTTGATCAAGTTGATGATGGGGCC...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACTGCATATGCCTGGAAAGTTaGGTCACATCCACCTACATG +
Preference number: 5 (lower is better)
Translates to: SSPTASRCQQDHKADAHCICLES*VTSTYM
Trigger: CATGTAGGTGGATGTGACCAAACTTTCCAGGCATAT...GCAGTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp GGAAGCAGTCCCACTGCTTCTCGCTGTCAGCAAGACCACAAGGCAGATGCCCACATATGCCTGGAAAGTTaGGTCACATCCACCTACATG +
Preference number: 5 (lower is better)
Translates to: GSSPTASRCQQDHKADAHICLES*VTSTYM
Trigger: CATGTAGGTGGATGTGACCAAACTTTCCAGGCATAT...GTGGGCATCTGCCTTGTGGTCTTGCTGACAGCGAGAAGCAGTGGGACTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp CAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCCAGTTGTGCCTCACTaGTTGATTATATTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: QRSFRGKLSPGLRESALAPVVPH*LIIFPA
Trigger: GGCTGGGAATATAATCAACAAGTGAGGCACAACTGG...AGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 90 bp GAGACAAGAAGCCCTAAAAGGCTCACACGAAATACCTCTGCTCTCTaGACAGCCTTTTCCTTCTGCCAGGTCCCTTTCCCAGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ETRSPKRLTRNTSAL*TAFSFCQVPFPAAV
Trigger: CACTGCTGCTGGGAAAGGGACCTGGCAGAAGGAAAAGGCTGTTCAGAGAGCAGAGGTATTTCGTGTGAGCCTTTTAGGGCTTCTTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 90 bp ACATTTCATGCCTGGGCAAACATCATCCTTTCTCATGGCTGGCTCTaGCTTACCCTCCACTTTCCCAGGGCCAGGATAGGTTTCTTGACC +
Preference number: 5 (lower is better)
Translates to: TFHAWANIILSHGWL*LTLHFPRARIGFLT
Trigger: GGTCAAGAAACCTATCCTGGCCCTGGGAAAGTGGAGGGTAAGGCAGAGCCAGCCATGAGAAAGGATGATGTTTGCCCAGGCATGAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 90 bp GCTGATACATTTCATGCCTGGGCAAACATCATCCTTTCTCATGGCTaGCTCTGCCTTACCCTCCACTTTCCCAGGGCCAGGATAGGTTTC +
Preference number: 5 (lower is better)
Translates to: ADTFHAWANIILSHG*LCLTLHFPRARIGF
Trigger: GAAACCTATCCTGGCCCTGGGAAAGTGGAGGGTAAGGCAGAGCCAGCCATGAGAAAGGATGATGTTTGCCCAGGCATGAAATGTATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGATGCAGCTGCAAATCCTaGGGTAACCTCACCGGCGTT +
Preference number: 5 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRCSCKS*GNLTGV
Trigger: AACGCCGGTGAGGTTACCCAAGGATTTGCAGCTGCA...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp GTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTGTTGTGCCTCACTTGTaGATTATATTCCCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: VFPREAQSWLARVSLGSPVVPHL*IIFPAK
Trigger: TTTGGCTGGGAATATAATCAACAAGTGAGGCACAAC...AGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGGAATCGCTTTTGTCATaGTCTCCCAGTTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: NGATQRSFRGKLSPGLREESLLS*SPSCAS
Trigger: TGAGGCACAACTGGGAGACAATGACAAAAGCGATTC...CTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp GCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCACCTTTCTCCAACTGTaGAACCATCACAGGTATGAA +
Preference number: 5 (lower is better)
Translates to: ATQRSFRGKLSPGLRESATFLQL*NHHRYE
Trigger: TTCATACCTGTGATGGTTCAACAGTTGGAGAAAGGT...GGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp TCTTTCCGAGGGAAGCTCAGTCCTGGCTTGCGAGAGTCAGCCTTGGCTCACCTCTATAGACTCCTTCAATaGTTTCTGTTCCTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: SFRGKLSPGLRESALAHLYRLLQ*FLFLQW
Trigger: CCACTGAAGGAACAGAAACAATTGAAGGAGTCTATA...GAGGTGAGCCAAGGCTGACTCTCGCAAGCCAGGACTGAGCTTCCCTCGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 90 bp GAAAGACATTTTGCCTTCTCCTGGGTGGAGGGTACAGATCTGGCTTaGAGTGCCCTGGAGATCTTCAGTAGTCTCTTAATCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ERHFAFSWVEGTDLA*SALEIFSSLLISSR
Trigger: CCTGGAAGAGATTAAGAGACTACTGAAGATCTCCAGGGCACTGCAAGCCAGATCTGTACCCTCCACCCAGGAGAAGGCAAAATGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp TTAGGTGAATGGTGCCACTCAAAGGTCTTTCCGAGGGAAGCTCAGTCCTGGCTTCCAGTTGTGCCTCACTaGTTGATTATATTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LGEWCHSKVFPREAQSWLPVVPH*LIIFPA
Trigger: GGCTGGGAATATAATCAACAAGTGAGGCACAACTGG...AAGCCAGGACTGAGCTTCCCTCGGAAAGACCTTTGAGTGGCACCATTCACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CCA 90 bp TCTGAACAGCCTTTTCCTTCTGCCAGGTCCCTTTCCCAGCAGCAGTaGTGTTTGTCTGGTTTGGTGTTTCTTATTGCTAAGCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: SEQPFPSARSLSQQQ*CLSGLVFLIAKPLG
Trigger: ACCCAATGGCTTAGCAATAAGAAACACCAAACCAGACAAACACCACTGCTGCTGGGAAAGGGACCTGGCAGAAGGAAAAGGCTGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS-3UTR CAA 90 bp TACAGCTTCCTGCTAATGCAGACAGCTATCCAAATGCAGCCCACAGCAGCCCACGTTGTGCCTCACTTGTaGATTATATTCCCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: YSFLLMQTAIQMQPTAAHVVPHL*IIFPAK
Trigger: TTTGGCTGGGAATATAATCAACAAGTGAGGCACAAC...GTGGGCTGCTGTGGGCTGCATTTGGATAGCTGTCTGCATTAGCAGGAAGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS-3UTR CAA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGAATCGCTTTTGTCATaGTCTCCCAGTTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRESLLS*SPSCAS
Trigger: TGAGGCACAACTGGGAGACAATGACAAAAGCGATTC...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp TTCTCATCTAAGTGTCGTAAGACAGCCCTGCACTGGTCCCTGAGTAACAGAGCAGGCCCCATCATCAACTaGATCAAGTTCCAAGACATT +
Preference number: 5 (lower is better)
Translates to: FSSKCRKTALHWSLSNRAGPIIN*IKFQDI
Trigger: AATGTCTTGGAACTTGATCAAGTTGATGATGGGGCC...TGCTCTGTTACTCAGGGACCAGTGCAGGGCTGTCTTACGACACTTAGATGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp TGGTCCCTGAGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGGTTCTGAATCGCTTTaGTCATTGTCTCCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: WSLSNRAAVMSTGSFYPRGSESL*SLSPSC
Trigger: ACAACTGGGAGACAATGACAAAAGCGATTCAGAACC...TCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACTCAGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTATCTTTGTTTTTCTGCCATTTCTaGGTCGAAGCCACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RAAVMSTGSFYPRAFLSLFFCHF*VEATEK
Trigger: CTTCTCCGTGGCTTCGACCAAGAAATGGCAGAAAAA...CAAAGATAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTACCAAGCCTATTTTCCTaGTACAGGAGTCACGACCAA +
Preference number: 5 (lower is better)
Translates to: SNRAAVMSTGSFYPRAFLPSLFS*YRSHDQ
Trigger: TTGGTCGTGACTCCTGTACAAGGAAAATAGGCTTGG...TAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 90 bp TTCTGTTCCTTCAGTGGATTTAGCCAACACTTTCAGCTTTCCAGGTaGACCTTTCTCCAACTGTTGAACCATCACAGGTATGAATTTCCG +
Preference number: 5 (lower is better)
Translates to: FCSFSGFSQHFQLSR*TFLQLLNHHRYEFP
Trigger: CGGAAATTCATACCTGTGATGGTTCAACAGTTGGAGAAAGGTTCACCTGGAAAGCTGAAAGTGTTGGCTAAATCCACTGAAGGAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AGTAACAGAGCAGCTGTCATGAGCACAGGCTCATTTTATCCGAGAGCATTCTTAACCTTTCTCCAACTGTaGAACCATCACAGGTATGAA +
Preference number: 5 (lower is better)
Translates to: SNRAAVMSTGSFYPRAFLTFLQL*NHHRYE
Trigger: TTCATACCTGTGATGGTTCAACAGTTGGAGAAAGGT...TAAGAATGCTCTCGGATAAAATGAGCCTGTGCTCATGACAGCTGCTCTGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 90 bp CCAAATTTCCTTGAGTCACATAATGCCTGCCCCAAAAGGGCAGCCTaGTGCATCAATTTCTTAGGAATACAACCTACATTTACACAAGTG +
Preference number: 5 (lower is better)
Translates to: PNFLESHNACPKRAA*CINFLGIQPTFTQV
Trigger: CACTTGTGTAAATGTAGGTTGTATTCCTAAGAAATTGATGCATCAGGCTGCCCTTTTGGGGCAGGCATTATGTGACTCAAGGAAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp ATAAAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGGTTCTGAATCGCTTTaGTCATTGTCTCCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: IKTIATRKANLGEWCHSKGSESL*SLSPSC
Trigger: ACAACTGGGAGACAATGACAAAAGCGATTCAGAACC...CTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS-3UTR CAA 90 bp AAAACAATAGCGACCAGAAAAGCTAACTTAGGTGAATGGTGCCACTCAAAGGTCTATAGACTCCTTCAATaGTTTCTGTTCCTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: KTIATRKANLGEWCHSKVYRLLQ*FLFLQW
Trigger: CCACTGAAGGAACAGAAACAATTGAAGGAGTCTATA...GACCTTTGAGTGGCACCATTCACCTAAGTTAGCTTTTCTGGTCGCTATTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 72 bp GCGGCGCCGGGACGGGGCCTGAGGGGCGGCGAACGCTaGCCTCGCTGGCCACTCTCACCACCCGCGCGAATC +
Preference number: 6 (lower is better)
Translates to: AAPGRGLRGGER*PRWPLSPPARI
Trigger: GATTCGCGCGGGTGGTGAGAGTGGCCAGCGAGGGCAGCGTTCGCCGCCCCTCAGGCCCCGTCCCGGCGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524230.9
CDS CCA 72 bp ACACGCGCGCCCCTCGGACATGGCCCGAGCGGCGGTTaGGGGCATCGCCCGCCTTTCCCGGCCCGGGCGACT +
Preference number: 6 (lower is better)
Translates to: TRAPLGHGPSGG*GHRPPFPARAT
Trigger: AGTCGCCCGGGCCGGGAAAGGCGGGCGATGCCCCCAACCGCCGCTCGGGCCATGTCCGAGGGGCGCGCGTGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CAA 72 bp AACACGCGCGCCCCTCGGACATGGCCCGAGCGGCGGTaGGGGGCATCGCCCGCCTTTCCCGGCCCGGGCGAC +
Preference number: 6 (lower is better)
Translates to: NTRAPRTWPERR*GASPAFPGPGD
Trigger: GTCGCCCGGGCCGGGAAAGGCGGGCGATGCCCCCAACCGCCGCTCGGGCCATGTCCGAGGGGCGCGCGTGTT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 72 bp TTGGGGGCATCGCCCGCCTTTCCCGGCCCGGGCGACTaGGGCGGCGACCGCTCCAGAGTCTCGCTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: LGASPAFPGPGD*GGDRSRVSLSL
Trigger: GAGCGAGAGCGAGACTCTGGAGCGGTCGCCGCCGCAGTCGCCCGGGCCGGGAAAGGCGGGCGATGCCCCCAA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS GCA 72 bp CCAGAGTCTCGCTCTCGCTCCTGGCCCGGCCGGGCCTaGTCACAAACCGAAACGCAGGCGGCTGCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: PESRSRSWPGRA*SQTETQAAAAP
Trigger: CGGCGCCGCAGCCGCCTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCAGGAGCGAGAGCGAGACTCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CCA 72 bp GCGGCGGCGACCGCTCCAGAGTCTCGCTCTCGCTCCTaGCCCGGCCGGGCCTGCTCACAAACCGAAACGCAG +
Preference number: 6 (lower is better)
Translates to: AAATAPESRSRS*PGRACSQTETQ
Trigger: CTGCGTTTCGGTTTGTGAGCAGGCCCGGCCGGGCCAGGAGCGAGAGCGAGACTCTGGAGCGGTCGCCGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CCA 72 bp CAGCCCCACACTCAATCGTGCCCTCACAGGCTCCAGTaGCATCTGCTGCTCAGCTTTCAGCTCCGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: QPHTQSCPHRLQ*HLLLSFQLRLP
Trigger: GGGCAGCCGGAGCTGAAAGCTGAGCAGCAGATGCCACTGGAGCCTGTGAGGGCACGATTGAGTGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp TCCAGTGGCATCTGCTGCTCAGCTTTCAGCTCCGGCTaGCCAAGTCTCCTCTCGCTCAGGTCCCTCATCCAG +
Preference number: 6 (lower is better)
Translates to: SSGICCSAFSSG*PSLLSLRSLIQ
Trigger: CTGGATGAGGGACCTGAGCGAGAGGAGACTTGGGCAGCCGGAGCTGAAAGCTGAGCAGCAGATGCCACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp CTCAATCGTGCCCTCACAGGCTCCAGTGGCATCTGCTaGTCAGCTTTCAGCTCCGGCTGCCCAAGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LNRALTGSSGIC*SAFSSGCPSLL
Trigger: GAGGAGACTTGGGCAGCCGGAGCTGAAAGCTGAGCAGCAGATGCCACTGGAGCCTGTGAGGGCACGATTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp ACACTCAATCGTGCCCTCACAGGCTCCAGTGGCATCTaGTGCTCAGCTTTCAGCTCCGGCTGCCCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: TLNRALTGSSGI*CSAFSSGCPSL
Trigger: GAGACTTGGGCAGCCGGAGCTGAAAGCTGAGCAGCAGATGCCACTGGAGCCTGTGAGGGCACGATTGAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 72 bp TCTCCATGTTCCAGAGAGGACGCCTCTGCAGTGGTGTaGGAGCAGCAGCAAGCCAGCCCCACACTCAATCGT +
Preference number: 6 (lower is better)
Translates to: SPCSREDASAVV*EQQQASPTLNR
Trigger: ACGATTGAGTGTGGGGCTGGCTTGCTGCTGCTCCCACACCACTGCAGAGGCGTCCTCTCTGGAACATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp AAAAACCTTGTCTCCATGTTCCAGAGAGGACGCCTCTaGAGTGGTGTGGGAGCAGCAGCAAGCCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: KNLVSMFQRGRL*SGVGAAASQPH
Trigger: GTGGGGCTGGCTTGCTGCTGCTCCCACACCACTGCAGAGGCGTCCTCTCTGGAACATGGAGACAAGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp TCCCTCATCCAGCTCTGGCTTCCAGAGGTCAGCTGCTaGAGTCTCCTATCCTCCTATTCTTCCGGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: SLIQLWLPEVSC*SLLSSYSSGSR
Trigger: CCTAGACCCGGAAGAATAGGAGGATAGGAGACTGCAGCAGCTGACCTCTGGAAGCCAGAGCTGGATGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp AGGTCCCTCATCCAGCTCTGGCTTCCAGAGGTCAGCTaGTGCAGTCTCCTATCCTCCTATTCTTCCGGGTCT +
Preference number: 6 (lower is better)
Translates to: RSLIQLWLPEVS*CSLLSSYSSGS
Trigger: AGACCCGGAAGAATAGGAGGATAGGAGACTGCAGCAGCTGACCTCTGGAAGCCAGAGCTGGATGAGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp GCCTGGGCAAACATCATCCTTTCTCATGGCTGGCTCTaGCTTACCCTCCACTTTCCCAGGGCCAGGATAGGT +
Preference number: 6 (lower is better)
Translates to: AWANIILSHGWL*LTLHFPRARIG
Trigger: ACCTATCCTGGCCCTGGGAAAGTGGAGGGTAAGGCAGAGCCAGCCATGAGAAAGGATGATGTTTGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp ATTCTTCCGGGTCTAGGCTTTCATGAAACATCCCGCTaGAATCTGAGAGGACCTCATAACGGGGCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: ILPGLGFHETSR*NLRGPHNGAPS
Trigger: GCTTGGAGCCCCGTTATGAGGTCCTCTCAGATTGCAGCGGGATGTTTCATGAAAGCCTAGACCCGGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CCA 72 bp GACATTTTGCCTTCTCCTGGGTGGAGGGTACAGATCTaGCTTGCAGTGCCCTGGAGATCTTCAGTAGTCTCT +
Preference number: 6 (lower is better)
Translates to: DILPSPGWRVQI*LAVPWRSSVVS
Trigger: AGAGACTACTGAAGATCTCCAGGGCACTGCAAGCCAGATCTGTACCCTCCACCCAGGAGAAGGCAAAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CAA 90 bp CCTTCTGCCAGGTCCCTTTCCCAGCAGCAGTGGTGTTTGTCTGGTTaGGTGTTTCTTATTGCTAAGCCATTGGGTGTAGCTGCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: PSARSLSQQQWCLSG*VFLIAKPLGVAALA
Trigger: AGCCAAAGCAGCTACACCCAATGGCTTAGCAATAAGAAACACCAAACCAGACAAACACCACTGCTGCTGGGAAAGGGACCTGGCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS TCA 72 bp AGCCCTAAAAGGCTCACACGAAATACCTCTGCTCTCTaGACAGCCTTTTCCTTCTGCCAGGTCCCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: SPKRLTRNTSAL*TAFSFCQVPFP
Trigger: TGGGAAAGGGACCTGGCAGAAGGAAAAGGCTGTTCAGAGAGCAGAGGTATTTCGTGTGAGCCTTTTAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS GCA 72 bp TTTGCCTTCTCCTGGGTGGAGGGTACAGATCTGGCTTaGAGTGCCCTGGAGATCTTCAGTAGTCTCTTAATC +
Preference number: 6 (lower is better)
Translates to: FAFSWVEGTDLA*SALEIFSSLLI
Trigger: GATTAAGAGACTACTGAAGATCTCCAGGGCACTGCAAGCCAGATCTGTACCCTCCACCCAGGAGAAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS CAA 90 bp CAGCCTTTTCCTTCTGCCAGGTCCCTTTCCCAGCAGCAGTGGTGTTaGTCTGGTTTGGTGTTTCTTATTGCTAAGCCATTGGGTGTAGCT +
Preference number: 6 (lower is better)
Translates to: QPFPSARSLSQQQWC*SGLVFLIAKPLGVA
Trigger: AGCTACACCCAATGGCTTAGCAATAAGAAACACCAAACCAGACAAACACCACTGCTGCTGGGAAAGGGACCTGGCAGAAGGAAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383572.3
CDS TCA 72 bp CCTTGGGTAACCTCACCGGCGTTTGGTCCAAGAATATaGAATCCTATCACCCGATCCAAGATGGGAAGCAAG +
Preference number: 6 (lower is better)
Translates to: PWVTSPAFGPRI*NPITRSKMGSK
Trigger: CTTGCTTCCCATCTTGGATCGGGTGATAGGATTTCATATTCTTGGACCAAACGCCGGTGAGGTTACCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518740.5
CDS TCA 72 bp CCCTCAGAGACAACCTGTAGCCCCAGTTTAGAGAGCTaGTGTGGTTCTGAATCGCTTTTGTCATTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: PSETTCSPSLES*CGSESLLSLSP
Trigger: GGGAGACAATGACAAAAGCGATTCAGAACCACATCAGCTCTCTAAACTGGGGCTACAGGTTGTCTCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CAA 90 bp CCCAGTTGTGCCTCACTTGTTGATTATATTCCCAGCCAAATTTCCTaGAGTCACATAATGCCTGCCCCAAAAGGGCAGCCTGATGCATCA +
Preference number: 6 (lower is better)
Translates to: PSCASLVDYIPSQIS*SHIMPAPKGQPDAS
Trigger: TGATGCATCAGGCTGCCCTTTTGGGGCAGGCATTATGTGACTCAAGGAAATTTGGCTGGGAATATAATCAACAAGTGAGGCACAACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 72 bp GGATTCCTAAATACCGTGGCCTTTCACCCGTTGCTATaGCAAACTGTGCAGCAGTATAATAAGTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: GFLNTVAFHPLL*QTVQQYNKSPV
Trigger: GACAGGAGACTTATTATACTGCTGCACAGTTTGTCATAGCAACGGGTGAAAGGCCACGGTATTTAGGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 72 bp CCTTGGGTAACCTCACCGGCGTTTGGTCCAAGAATATaGAATCCTATCACCCGATCATGGTCGAATTTATTG +
Preference number: 6 (lower is better)
Translates to: PWVTSPAFGPRI*NPITRSWSNLL
Trigger: CAATAAATTCGACCATGATCGGGTGATAGGATTTCATATTCTTGGACCAAACGCCGGTGAGGTTACCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 72 bp CTTGAGTCACATAATGCCTGCCCCAAAAGGGCAGCCTaGTGCATCAATTTCTTAGGAATACAACCTACATTT +
Preference number: 6 (lower is better)
Translates to: LESHNACPKRAA*CINFLGIQPTF
Trigger: AAATGTAGGTTGTATTCCTAAGAAATTGATGCATCAGGCTGCCCTTTTGGGGCAGGCATTATGTGACTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS TCA 72 bp TTCAGTGGATTTAGCCAACACTTTCAGCTTTCCAGGTaGACCTTTCTCCAACTGTTGAACCATCACAGGTAT +
Preference number: 6 (lower is better)
Translates to: FSGFSQHFQLSR*TFLQLLNHHRY
Trigger: ATACCTGTGATGGTTCAACAGTTGGAGAAAGGTTCACCTGGAAAGCTGAAAGTGTTGGCTAAATCCACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9
CDS CAA 72 bp TCACCCGATCATGGTCGAATTTATTGCAGATTATCTTaGCATAACAAGTGTTGTTCTCTCTGCCAGCTACTG +
Preference number: 6 (lower is better)
Translates to: SPDHGRIYCRLS*HNKCCSLCQLL
Trigger: CAGTAGCTGGCAGAGAGAACAACACTTGTTATGCAAAGATAATCTGCAATAAATTCGACCATGATCGGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523403.3
ENST00000524230.9