RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TXNRD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000184470

Ensembl transcript IDs: ENST00000334363.14, ENST00000400518.5, ENST00000400519.6, ENST00000400521.7, ENST00000400525.6, ENST00000462330.5, ENST00000462843.2, ENST00000471835.1, ENST00000474308.5, ENST00000475995.3, ENST00000484672.5, ENST00000485358.5, ENST00000487165.5, ENST00000491939.6, ENST00000494454.5, ENST00000495655.2, ENST00000496729.2, ENST00000542719.6, ENST00000634471.1, ENST00000634537.1, ENST00000635155.1

Found 990 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTaGAGGGATGGCGCTTACCCTCAGCAGCCTGTCACCGTGGGGTCC +
Preference number: 1 (lower is better)
Translates to: LASEELAAGAPCALA*RDGAYPQQPVTVGS
Trigger: GGACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR CCA 90 bp TGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTaGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTGTCACCGTGG +
Preference number: 1 (lower is better)
Translates to: WVWPPRSWRRAHRVP*PAGMALTLSSLSPW
Trigger: CCACGGTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR GCA 90 bp CATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTGTCAC +
Preference number: 1 (lower is better)
Translates to: HPGSGLRGAGGGRTV*PGLQGWRLPSAACH
Trigger: GTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR GCA 90 bp GCACCCCTGCCACATGCCCTGTCCTCAAACAGAGCCAGCCCCACCTaGATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACC +
Preference number: 1 (lower is better)
Translates to: APLPHALSSNRASPT*IPGSGLRGAGGGRT
Trigger: GGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGTGGGGCTGGCTCTGTTTGAGGACAGGGCATGTGGCAGGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 90 bp CCCAGGCCGGAGGATGCACTATTAGACCACGAGGCGAGGGGGCTCTaGCACAGGCATCCCTGGGGCAGAGGCCAGGAGCCCTTGCCAGTT +
Preference number: 1 (lower is better)
Translates to: PRPEDALLDHEARGL*HRHPWGRGQEPLPV
Trigger: AACTGGCAAGGGCTCCTGGCCTCTGCCCCAGGGATGCCTGTGCCAGAGCCCCCTCGCCTCGTGGTCTAATAGTGCATCCTCCGGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 90 bp CCTGGCTCTGCAGAGCTGGAACAGAACCAGATGTGCAGGGCAGGCTaGGCAGGGCCGGCCATCACAGGGCAGCGTCTCCACCTTCTGGGA +
Preference number: 1 (lower is better)
Translates to: PGSAELEQNQMCRAG*AGPAITGQRLHLLG
Trigger: TCCCAGAAGGTGGAGACGCTGCCCTGTGATGGCCGGCCCTGCCCAGCCTGCCCTGCACATCTGGTTCTGTTCCAGCTCTGCAGAGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR TCA 90 bp CGGCCATCACAGGGCAGCGTCTCCACCTTCTGGGAGATAGGGAAATaGGCGGGCGCTGAACTCTGCAGGAGCCAGGCCTTGGTGGGAGGC +
Preference number: 1 (lower is better)
Translates to: RPSQGSVSTFWEIGK*AGAELCRSQALVGG
Trigger: GCCTCCCACCAAGGCCTGGCTCCTGCAGAGTTCAGCGCCCGCTCATTTCCCTATCTCCCAGAAGGTGGAGACGCTGCCCTGTGATGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR GCA 90 bp GGCCAGCTTCCCGACTGCAGCCCCCTGTGGGGCAGCAACTTGAGATaGCCGACTTTAGCCCACCCGGGACACCTTCCACGCCAACATCCA +
Preference number: 1 (lower is better)
Translates to: GQLPDCSPLWGSNLR*PTLAHPGHLPRQHP
Trigger: TGGATGTTGGCGTGGAAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTCAAGTTGCTGCCCCACAGGGGGCTGCAGTCGGGAAGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 90 bp GAGGTTTGGGCCCCTGGGAACTTCCCCTTCTGCCTGTCACCGCTGTaGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCAG +
Preference number: 1 (lower is better)
Translates to: EVWAPGNFPFCLSPL*PGYRMEHPFWVAWQ
Trigger: CTGCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGACAGGCAGAAGGGGAAGTTCCCAGGGGCCCAAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 90 bp GCACTATTAGACCACGAGGCGAGGGGGCTCTGGCACAGGCATCCCTaGGGCAGAGGCCAGGAGCCCTTGCCAGTTTCTTCCTCCCCAGAA +
Preference number: 1 (lower is better)
Translates to: ALLDHEARGLWHRHP*GRGQEPLPVSSSPE
Trigger: TTCTGGGGAGGAAGAAACTGGCAAGGGCTCCTGGCCTCTGCCCCAGGGATGCCTGTGCCAGAGCCCCCTCGCCTCGTGGTCTAATAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR TCA 90 bp GGATGGCGCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAGCTTGACTACCTCCTCAGAGCATGT +
Preference number: 1 (lower is better)
Translates to: GWRLPSAACHRGVQA*ALGDAQLDYLLRAC
Trigger: ACATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR GCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACC +
Preference number: 1 (lower is better)
Translates to: PLYLHCRNARGLGHG*PQGRFPPRSSSSGT
Trigger: GGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR TCA 90 bp TCAAGGGCCAGGGAAGGCGAGGATGATTGCCTAGTTGATCCTCGATaGGGACACCTGGCTGATGCCGTCTCAGTCTCTTCTCTGGTTTTT +
Preference number: 1 (lower is better)
Translates to: SRAREGEDDCLVDPR*GHLADAVSVSSLVF
Trigger: AAAAACCAGAGAAGAGACTGAGACGGCATCAGCCAGGTGTCCTCATCGAGGATCAACTAGGCAATCATCCTCGCCTTCCCTGGCCCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475995.3
3UTR TCA 90 bp GTGCTGAAAACAGGCGGCTTGTGCACACCCATGTTCACAGCAGCATaGTCCACAACAGCCAAAAGACGGAAGCAACCTAAGTGTCCACTG +
Preference number: 1 (lower is better)
Translates to: VLKTGGLCTPMFTAA*STTAKRRKQPKCPL
Trigger: CAGTGGACACTTAGGTTGCTTCCGTCTTTTGGCTGTTGTGGATCATGCTGCTGTGAACATGGGTGTGCACAAGCCGCCTGTTTTCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR GCA 90 bp ACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATaGTACACAAATGCTAACTCTAACAAATGCTGCAACATGGATGCA +
Preference number: 1 (lower is better)
Translates to: THIQLSLQQEGNAGT*YTNANSNKCCNMDA
Trigger: TGCATCCATGTTGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR CCA 90 bp CTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAACATaGATGCACCCTGAAAACATTGTGCTAAGAGAAATGAGCCAGTCA +
Preference number: 1 (lower is better)
Translates to: LAHATQMLTLTNAAT*MHPENIVLREMSQS
Trigger: TGACTGGCTCATTTCTCTTAGCACAATGTTTTCAGGGTGCATCCATGTTGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR GCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: AILGLASEELAAGAPCALGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: ASEELAAGAPCALACRDGPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCAGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: RATCPALALHADHLTGAPGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: GQSPEPSLWGTRATCPALGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCATGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 2 (lower is better)
Translates to: RATCPALALHADHLTGAPWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: QHLRSTLTISQALQERVEGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 2 (lower is better)
Translates to: QHLRSTLTISQALQERVEWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 2 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR CAA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: PLSHPCGAHGPPVQH*RSTLTISQALQERV
Trigger: AACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR TCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 2 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: PPVQHLRSTLTISQALQEQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCACCCCACCTGCATACCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: RATCPALALHADHLTGAPPHLHT*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGTATGCAGGTGGGG...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR TCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: TCPALALHADHLTGAPGEQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGAPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 2 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCATGGCCAGGGCTCCTaGACCCCTGCCACATGCCCT +
Preference number: 2 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHHGQGS*TPATCP
Trigger: AGGGCATGTGGCAGGGGTGCAGGAGCCCTGGCCATG...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGAAACCCAGCAGAGAATaGCCCCACCCCAGGGCGATG +
Preference number: 2 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLKPSRE*PHPRAM
Trigger: CATCGCCCTGGGGTGGGGCCATTCTCTGCTGGGTTT...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CAA 90 bp CCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCATGTGGGATGGATACCCACGGTCCGC +
Preference number: 2 (lower is better)
Translates to: PVTVGSRPERLEMRS*TTSSEHVGWIPTVR
Trigger: GCGGACCGTGGGTATCCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR-3UTR TCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 2 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR TCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: SLFALQKCQGARTWVPTGGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR CAA 90 bp GCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACTACCTCCTCAGAGCATGTGGGATGG +
Preference number: 2 (lower is better)
Translates to: AYPQQPVTVGSRPER*EMRSLTTSSEHVGW
Trigger: CCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR-3UTR TCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GAGATGCCCGACTTTAGCCCACCCGGGACACCTTCCACGCCAACATCCACCTGGGGGAACTTCCCCTTCTaGCTGTCACCGCTGTGGCCT +
Preference number: 2 (lower is better)
Translates to: EMPDFSPPGTPSTPTSTWGNFPF*LSPLWP
Trigger: AGGCCACAGCGGTGACAGGCAGAAGGGGAAGTTCCC...CCAGGTGGATGTTGGCGTGGAAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR TCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 2 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR TCA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 2 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHRGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR-3UTR GCA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 2 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 2 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: SLFALQKCQGARTWVPTGGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTTGCCTGTCACCGCTGTaGCCTGGTTACAGGATGGAG +
Preference number: 2 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGCLSPL*PGYRME
Trigger: CTCCATCCTGTAACCAGGCCACAGCGGTGACAGGCA...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTTGTCCACAGGCATCTTaGGGGGAGCCCACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSCPQAS*GEPTAL
Trigger: CAGAGCAGTGGGCTCCCCCCAAGATGCCTGTGGACA...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR GCA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp CAAGGGAGATGGGTGAGAAATAAACCCAGCAGAGAATGGCCCCACCCCAGGGCGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 2 (lower is better)
Translates to: QGRWVRNKPSREWPHPRAAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CGCCCTGGGGTGGGGCCATTCTCTGCTGGGTTTATTTCTCACCCATCTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR GCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGTGCACCCCTGCCACATaGCCTGTCCTCAAACAGAGC +
Preference number: 2 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLCTPAT*PVLKQS
Trigger: GCTCTGTTTGAGGACAGGGCATGTGGCAGGGGTGCA...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR GCA 90 bp TCAGCCACCCACCCCTCACATCAGCCTAGCTATGTCTCCCACTGCCACACCCAGGGCAGCAACTTGAGATaGCCGACTTTAGCCCACCCG +
Preference number: 2 (lower is better)
Translates to: SATHPSHQPSYVSHCHTQGSNLR*PTLAHP
Trigger: CGGGTGGGCTAAAGTCGGGCATCTCAAGTTGCTGCC...CTGGGTGTGGCAGTGGGAGACATAGCTAGGCTGATGTGAGGGGTGGGTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp CCCCAAACCTGGCCTGCAGCCATCCTGCCAACAACAGGAAGGTCAGCACAGGTCGGCCTGGTTACAGGATaGAGCACCCATTCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: PQTWPAAILPTTGRSAQVGLVTG*STHSGW
Trigger: CCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCC...GACCTGTGCTGACCTTCCTGTTGTTGGCAGGATGGCTGCAGGCCAGGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCGGAGGTTTGGGCCCCTaGGAACTTCCCCTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFGGLGP*ELPLLP
Trigger: AGGCAGAAGGGGAAGTTCCCAGGGGCCCAAACCTCC...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR TCA 90 bp TTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 2 (lower is better)
Translates to: FICIAEMPGGSDMGAHRVRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...TACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp AACAACAGGAAGGTCAGCACAGGTCAGCCACCCACCCCTCACATCAGCCTAGCTGCCCAGGCCGGAGGATaGACTATTAGACCACGAGGC +
Preference number: 2 (lower is better)
Translates to: NNRKVSTGQPPTPHISLAAQAGG*TIRPRG
Trigger: GCCTCGTGGTCTAATAGTGCATCCTCCGGCCTGGGC...AGCTAGGCTGATGTGAGGGGTGGGTGGCTGACCTGTGCTGACCTTCCTGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp AACAACAGGAAGGTCAGCACAGGTCAGCCACCCACCCCTCACATCAGCCTAGCTGTCACCGCTGTGGCCTaGTTACAGGATGGAGCACCC +
Preference number: 2 (lower is better)
Translates to: NNRKVSTGQPPTPHISLAVTAVA*LQDGAP
Trigger: GGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGAC...AGCTAGGCTGATGTGAGGGGTGGGTGGCTGACCTGTGCTGACCTTCCTGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 2 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR-3UTR TCA 90 bp TTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 2 (lower is better)
Translates to: FICIAEMPGGSDMGAHRVTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...TACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp TCAGCCACCCACCCCTCACATCAGCCTAGCTATGTCTCCCACTGCCACACCCAGTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 2 (lower is better)
Translates to: SATHPSHQPSYVSHCHTQFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...CTGGGTGTGGCAGTGGGAGACATAGCTAGGCTGATGTGAGGGGTGGGTGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR GCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGCCGGGAGGCGGAGGTTaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: AGSECLMGTELSLEIMEKPGGGG*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCAACCTCCGCCTCCCGG...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR CCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCTAGTTGATCCTCGATaGGGACACCTGGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCLVDPR*GHLADA
Trigger: GGCATCAGCCAGGTGTCCTCATCGAGGATCAACTAG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR GCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCTGCATACCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHLHTWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR TCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 2 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCGGCGGAGGTTGCCACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: GSECLMGTELSLEIMEKFGGGCH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGCAACCTCCGCC...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR GCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAGGCGGAGGTTGCCACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTGGGCH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGCAACCTCCGCC...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR GCA 90 bp GAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 2 (lower is better)
Translates to: EKVPSLFALQKCQGARTWAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGAGCCAGCCCCACCTaGATACCTGGGTCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDRASPT*IPGSGL
Trigger: GAGGCCAGACCCAGGTATGCAGGTGGGGCTGGCTCT...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: SEKVPSLFALQKCQGARTGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTACCTTAATAAGCAATTaGTCAAGGGCCAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCTLISN*SRAREG
Trigger: GCCTTCCCTGGCCCTTGAGCAATTGCTTATTAAGGT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGAGGTGGAGGCTGCAGTaGGCTATGATCACACCACCA +
Preference number: 2 (lower is better)
Translates to: AGSECLMGTELSLEIMEKRWRLQ*AMITPP
Trigger: TGGTGGTGTGATCATAGCTCACTGCAGCCTCCACCT...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACACCGGGCAGCAGGGAGTaGGTGTTTAATGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTPGSRE*VFNGDR
Trigger: TCTGTCCCCATTAAACACTCACTCCCTGCTGCCCGG...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR TCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCCTAGTTGATCCTCGATaGGGACACCTGGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCLVDPR*GHLADA
Trigger: GGCATCAGCCAGGTGTCCTCATCGAGGATCAACTAG...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAGGCTGCAGTGAGCTATaGTCACACCACCACACTCCT +
Preference number: 2 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTGCSEL*SHHHTP
Trigger: AGGAGTGTGGTGGTGTGATCATAGCTCACTGCAGCC...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAGGTGGAGGCTGCAGTaGGCTATGATCACACCACCA +
Preference number: 2 (lower is better)
Translates to: GSECLMGTELSLEIMEKFRWRLQ*AMITPP
Trigger: TGGTGGTGTGATCATAGCTCACTGCAGCCTCCACCT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTCCTGGCCTACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: AGSECLMGTELSLEIMEKSWPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTAGGCCAGGA...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCCTGAGATGGGAAGATTaGTTGAGCCTGGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: GSECLMGTELSLEIMEKFLRWED*LSLGGG
Trigger: TCCACCTCCCAGGCTCAATCAATCTTCCCATCTCAG...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGCCTAGCTGGAAAGCCTaGAGCAGCAAAACATTTAAT +
Preference number: 2 (lower is better)
Translates to: AGSECLMGTELSLEIMEKPSWKA*SSKTFN
Trigger: ATTAAATGTTTTGCTGCTTCAGGCTTTCCAGCTAGG...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR GCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAACCTTAATAAGCAATTaGTCAAGGGCCAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: RKEMLAHATQMLTLTNAATLISN*SRAREG
Trigger: GCCTTCCCTGGCCCTTGAGCAATTGCTTATTAAGGT...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR CCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAACAACAAACTAGCTTaGCTGGGCACAGTAGCTCAA +
Preference number: 2 (lower is better)
Translates to: GSECLMGTELSLEIMEKFNNKLA*LGTVAQ
Trigger: TTGAGCTACTGTGCCCAGCCAAGCTAGTTTGTTGTT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCCTTAAACCTGGAAGGTaGCAAGTAGGATTTATGTGC +
Preference number: 2 (lower is better)
Translates to: GSECLMGTELSLEIMEKFLKPGR*QVGFMC
Trigger: GCACATAAATCCTACTTGTCACCTTCCAGGTTTAAG...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACACTTAAACCTGGAAGGTaGCAAGTAGGATTTATGTGC +
Preference number: 2 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTLKPGR*QVGFMC
Trigger: GCACATAAATCCTACTTGTCACCTTCCAGGTTTAAG...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR CCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAAACAACAAACTAGCTTaGCTGGGCACAGTAGCTCAA +
Preference number: 2 (lower is better)
Translates to: RKEMLAHATQMLTLTNAANNKLA*LGTVAQ
Trigger: TTGAGCTACTGTGCCCAGCCAAGCTAGTTTGTTGTT...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCACCTAGCTGGAAAGCCTaGAGCAGCAAAACATTTAAT +
Preference number: 2 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAPSWKA*SSKTFN
Trigger: ATTAAATGTTTTGCTGCTTCAGGCTTTCCAGCTAGG...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR-3UTR GCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAAGAGATGGATGGTCATaGTGCTTGTACAATATGAAC +
Preference number: 2 (lower is better)
Translates to: RKEMLAHATQMLTLTNAARDGWS*CLYNMN
Trigger: GTTCATATTGTACAAGCAGCATGACCATCCATCTCT...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR CCA 72 bp GGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GLQPSWVWPPRS*RRAHRVPWPAG
Trigger: CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR CCA 72 bp CCCCACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: PHLHTWVWPPRS*RRAHRVPWPAG
Trigger: CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGTGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 72 bp GGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATaGCGCTTACCCTCAGCAGCCTGTCACCGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: GGGRTVCPGLQG*RLPSAACHRGV
Trigger: GACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR GCA 72 bp GAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTaGAGGGATGGCGCTTACCCTCAGCAGCCTGTCACC +
Preference number: 3 (lower is better)
Translates to: EELAAGAPCALA*RDGAYPQQPVT
Trigger: GGTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR GCA 72 bp TCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGGCGCTTACCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: SGLRGAGGGRTV*PGLQGWRLPSA
Trigger: TGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR-3UTR CAA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 3 (lower is better)
Translates to: AILGLASEELAAGAPCALSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR GCA 72 bp CCCGACTGCAGCCCCCTGTGGGGCAGCAACTTGAGATaGCCGACTTTAGCCCACCCGGGACACCTTCCACGC +
Preference number: 3 (lower is better)
Translates to: PDCSPLWGSNLR*PTLAHPGHLPR
Trigger: GCGTGGAAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTCAAGTTGCTGCCCCACAGGGGGCTGCAGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 72 bp GCAGAGCTGGAACAGAACCAGATGTGCAGGGCAGGCTaGGCAGGGCCGGCCATCACAGGGCAGCGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: AELEQNQMCRAG*AGPAITGQRLH
Trigger: GTGGAGACGCTGCCCTGTGATGGCCGGCCCTGCCCAGCCTGCCCTGCACATCTGGTTCTGTTCCAGCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 72 bp GAGGATGCACTATTAGACCACGAGGCGAGGGGGCTCTaGCACAGGCATCCCTGGGGCAGAGGCCAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: EDALLDHEARGL*HRHPWGRGQEP
Trigger: GGGCTCCTGGCCTCTGCCCCAGGGATGCCTGTGCCAGAGCCCCCTCGCCTCGTGGTCTAATAGTGCATCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 72 bp GCAGGGATGGCGCTTACCCTCAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCTTGGAGATGCGCAGCT +
Preference number: 3 (lower is better)
Translates to: AGMALTLSSLSP*GPGLSAWRCAA
Trigger: AGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR-3UTR CAA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 3 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR TCA 72 bp CACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCCAGGAGAGGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: HTGHLSSTCAPR*PSHRRSRRGLR
Trigger: CCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
3UTR-3UTR CAA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 3 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR TCA 72 bp CAGGGCAGCGTCTCCACCTTCTGGGAGATAGGGAAATaGGCGGGCGCTGAACTCTGCAGGAGCCAGGCCTTG +
Preference number: 3 (lower is better)
Translates to: QGSVSTFWEIGK*AGAELCRSQAL
Trigger: CAAGGCCTGGCTCCTGCAGAGTTCAGCGCCCGCTCATTTCCCTATCTCCCAGAAGGTGGAGACGCTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR GCA 72 bp CAGCATGTCCCACGGTGGTGGGGAGACACGCAGAGATaGAAGGTGCTGGGGATGGCAAGATGGGCACAGCCT +
Preference number: 3 (lower is better)
Translates to: QHVPRWWGDTQR*KVLGMARWAQP
Trigger: AGGCTGTGCCCATCTTGCCATCCCCAGCACCTTGCATCTCTGCGTGTCTCCCCACCACCGTGGGACATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
3UTR CCA 72 bp GCCCCTGGGAACTTCCCCTTCTGCCTGTCACCGCTGTaGCCTGGTTACAGGATGGAGCACCCATTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: APGNFPFCLSPL*PGYRMEHPFWV
Trigger: CACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGACAGGCAGAAGGGGAAGTTCCCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CAA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCCCGGGAGGCGGAGGTaGCCACTGCACTCCAGCCTG +
Preference number: 3 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCPGRRR*PLHSSL
Trigger: CAGGCTGGAGTGCAGTGGCAACCTCCGCCTCCCGGG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR-3UTR CAA 90 bp GCCCTTGCCAGTTTCTTCCTCCCCAGAAGAGGTCACGATGAACAACATGCCCCCCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 3 (lower is better)
Translates to: ALASFFLPRRGHDEQHAPPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...GGGGGCATGTTGTTCATCGTGACCTCTTCTGGGGAGGAAGAAACTGGCAAGGGC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 72 bp TGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTaGCGTGGCAGGTGTAGCCTTGCTGTACACCTGGAG +
Preference number: 3 (lower is better)
Translates to: CGLVTGWSTHSG*RGRCSLAVHLE
Trigger: CTCCAGGTGTACAGCAAGGCTACACCTGCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR CCA 72 bp CAAGGGAGATGGGTGAGAAATAAACCCAGCAGAGAATaGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGA +
Preference number: 3 (lower is better)
Translates to: QGRWVRNKPSRE*PHPRAMRHRER
Trigger: TCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGGGTTTATTTCTCACCCATCTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CAA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGGATGAGCCCCGTTTCTaGATACCTCCTGTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRDEPRF*IPPVCG
Trigger: CCCACACACAGGAGGTATCAAGAAACGGGGCTCATC...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CAA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGAGAGGCCAGGAGCCCTaGCCAGTTTCTTCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQRGQEP*PVSSSP
Trigger: TGGGGAGGAAGAAACTGGCAAGGGCTCCTGGCCTCT...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR TCA 72 bp AGTCCCTCGAGGAGTCAGATCCATAGAGACACACAGTaGAGGGTGAGTGCCCGGGCAGCAGGGAGTGAGTGT +
Preference number: 3 (lower is better)
Translates to: SPSRSQIHRDTQ*RVSARAAGSEC
Trigger: ACACTCACTCCCTGCTGCCCGGGCACTCACCCTTCACTGTGTGTCTCTATGGATCTGACTCCTCGAGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR GCA 72 bp TTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCACCCAGGTCGTCATCA +
Preference number: 3 (lower is better)
Translates to: LHCRNARGLGHG*PQGRFPPRSSS
Trigger: TGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR TCA 72 bp CACACAGTGAAGGGTGAGTGCCCGGGCAGCAGGGAGTaGGTGTTTAATGGGGACAGAGCTCAGTTTGGAGAT +
Preference number: 3 (lower is better)
Translates to: HTVKGECPGSRE*VFNGDRAQFGD
Trigger: ATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGCTGCCCGGGCACTCACCCTTCACTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR TCA 72 bp AGGGAAGGCGAGGATGATTGCCTAGTTGATCCTCGATaGGGACACCTGGCTGATGCCGTCTCAGTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: REGEDDCLVDPR*GHLADAVSVSS
Trigger: AGAAGAGACTGAGACGGCATCAGCCAGGTGTCCTCATCGAGGATCAACTAGGCAATCATCCTCGCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475995.3
3UTR GCA 72 bp GGGAGGTGTAATGTTCTGATAAGAGTTTCCTCAGGATaGCCTTTGTTTATCCCTATCGAGCGCGGCCCCGCC +
Preference number: 3 (lower is better)
Translates to: GRCNVLIRVSSG*PLFIPIERGPA
Trigger: GGCGGGGCCGCGCTCGATAGGGATAAACAAAGGGCATCCTGAGGAAACTCTTATCAGAACATTACACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
3UTR-3UTR CAA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
3UTR-3UTR CAA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGAAACAACAAACTAGCTaGGCTGGGCACAGTAGCTCA +
Preference number: 3 (lower is better)
Translates to: AGSECLMGTELSLEIMEKKQQTS*AGHSSS
Trigger: TGAGCTACTGTGCCCAGCCAAGCTAGTTTGTTGTTT...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
3UTR TCA 72 bp CAACAGCCAAAAGACGGAAGCAACCTAAGTGTCCACTaGCAGATAATGGACACACATACAACTCAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: QQPKDGSNLSVH*QIMDTHTTQPS
Trigger: TGAAGGCTGAGTTGTATGTGTGTCCATTATCTGTCAGTGGACACTTAGGTTGCTTCCGTCTTTTGGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR GCA 72 bp CAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATaGTACACAAATGCTAACTCTAACAAATGCTGCAAC +
Preference number: 3 (lower is better)
Translates to: QLSLQQEGNAGT*YTNANSNKCCN
Trigger: GTTGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR TCA 72 bp TCACAAAAGGACAAACACTGCATGATTCTACTTACATaGAGTCCCTCGAGGAGTCAGATCCATAGAGACACA +
Preference number: 3 (lower is better)
Translates to: SQKDKHCMILLT*SPSRSQIHRDT
Trigger: TGTGTCTCTATGGATCTGACTCCTCGAGGGACTTCATGTAAGTAGAATCATGCAGTGTTTGTCCTTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR TCA 72 bp GCTAACTCTAACAAATGCTGCAACATGGATGCACCCTaGAAACATTGTGCTAAGAGAAATGAGCCAGTCACA +
Preference number: 3 (lower is better)
Translates to: ANSNKCCNMDAP*KHCAKRNEPVT
Trigger: TGTGACTGGCTCATTTCTCTTAGCACAATGTTTTCAGGGTGCATCCATGTTGCAGCATTTGTTAGAGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
3UTR CCA 72 bp GCTACACAAATGCTAACTCTAACAAATGCTGCAACATaGATGCACCCTGAAAACATTGTGCTAAGAGAAATG +
Preference number: 3 (lower is better)
Translates to: ATQMLTLTNAAT*MHPENIVLREM
Trigger: CATTTCTCTTAGCACAATGTTTTCAGGGTGCATCCATGTTGCAGCATTTGTTAGAGTTAGCATTTGTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMAPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMAGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGGCSPR*RRCRRG
Trigger: GCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCC...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGACCTTCCTTCCCAGCTaGGCGGCTGCTGCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRTFLPS*AAAAPR
Trigger: GCGGGGCGCAGCAGCCGCCCAGCTGGGAAGGAAGGT...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400525.6
CDS-3UTR TCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRRGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMARGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: WPAAILGLASEELAAGAPPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGGCTGGGCGGCCTCCTTaGCACAAGCCAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWAGRPP*HKPGHQ
Trigger: CTGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGC...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMAGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMARWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGCPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGTCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: AILGLASEELAAGAPCALAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCAQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGCGGAGGGCTGCCCCATaGCCAAGCTCAAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRRRAAP*PSSKEP
Trigger: GGGCTCTTTTGAGCTTGGTCATGGGGCAGCCCTCCG...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485358.5
CDS-3UTR GCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWQASQQ*RLVHQL
Trigger: AAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTG...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMATSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AILGLASEELAAGAPCALPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCCCCTCGGAGGGCTaGCCCATGACCAAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWRPSEG*PMTKLK
Trigger: TTTGAGCTTGGTCATGGGGCAGCCCTCCGAGGGGCG...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485358.5
CDS-3UTR CCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPTCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCGAGGCGAGGGGGCTCTaGCACAGGCATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TCIPGSGLRGAGGGRTVCEARGL*HRHPWG
Trigger: GCCCCAGGGATGCCTGTGCCAGAGCCCCCTCGCCTC...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALAPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: AILGLASEELAAGAPCALCCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCAGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: TCIPGSGLRGAGGGRTVCRGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCATCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGAGAGGGGAAGTACACTaGACTGGGCCTGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRRGEVH*TGPEVR
Trigger: CCGGACCTCAGGCCCAGTTCAGTGTACTTCCCCTCT...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR GCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCAGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: WPAAILGLASEELAAGAPTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTTGTGGGGCACAGAGGTaGCTTCCCGGGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPCGAQR*LPGSPP
Trigger: TGGTGGACTCCCGGGAAGCCACCTCTGTGCCCCACA...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCCAGCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTTGGGGGTGCCCCAGGTaGGCTGGATGGCACGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSREWPHPRAMRHRERRGWGCPR*AGWHGL
Trigger: CAGCCCGTGCCATCCAGCCCACCTGGGGCACCCCCA...ACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRGCSPR*RRCRRG
Trigger: GCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCC...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGHTPAG*RRSWEH
Trigger: ATGTTCCCACGACCGTCTTCACCCCGCTGGAGTATG...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp AGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTACCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RSWRRAHRVPWPAGMALTTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...GGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR TCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TCIPGSGLRGAGGGRTVCCPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALAGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALAMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCCACCACGTCACCAATaGCGTAGATGTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWPPRHQ*RRCGAQ
Trigger: CTGTGCCCCACATCTACGCCATTGGTGACGTGGTGG...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQGCSPR*RRCRRG
Trigger: GCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCC...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALAHTPAG*RRSWEH
Trigger: ATGTTCCCACGACCGTCTTCACCCCGCTGGAGTATG...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHRGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTAGCAGTGCCGCCTGGTaGATCAGCTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPSSAAW*ISFLGM
Trigger: CATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCT...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEAPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCALGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGGGCGGCCTCCTTaGCACAAGCCAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHAGRPP*HKPGHQ
Trigger: CTGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGC...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCAPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: WPAAILGLASEELAAGAPPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGAPCALACRDGAYPQQPQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...AGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CCA 90 bp CCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCAGACTTCTGGTGTCTaGGACTCGACCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: PPRSWRRAHRVPWPAGMAQTSGV*DSTYGP
Trigger: TGGGCCATAGGTCGAGTCCCAGACACCAGAAGTCTG...CGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: GLASEELAAGAPCALACRSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGATGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCGGAGCCAGGCCTTGGTaGGAGGCCTCGGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALGARPW*EASVGG
Trigger: GCCTCCCACCGAGGCCTCCCACCAAGGCCTGGCTCC...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCATGTGCAGGGCAGGCTaGGCAGGGCCGGCCATCACA +
Preference number: 4 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSMCRAG*AGPAIT
Trigger: TGTGATGGCCGGCCCTGCCCAGCCTGCCCTGCACAT...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCAGCGGCCAACCCGCCTaGCAGCCAGCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQASGQPA*QPAGWG
Trigger: CCCCCATCCTGCTGGCTGCCAGGCGGGTTGGCCGCT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: WPAAILGLASEELAAGAPLTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCTCCACCAGGATCTTCTaGGTGTCGGGGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGSTRIF*VSGLVS
Trigger: AGATACTAGCCCCGACACTCAGAAGATCCTGGTGGA...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: WPAAILGLASEELAAGAPWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALAWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPRGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGGGCACAGCCTAGTGTaGGTGCCGCCCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAGHSLV*VPPHRP
Trigger: AGGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCCAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSQASQQ*RLVHQL
Trigger: AAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTG...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GAGTTTCCTCAGGATGCCCTTTGTTTATCCCTATCGAGCGCGGCCCCGCCGGGGCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: EFPQDALCLSLSSAAPPGPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...CCCCGGCGGGGCCGCGCTCGATAGGGATAAACAAAGGGCATCCTGAGGAAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGAPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGCCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVEPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRLGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGEGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCAGCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTGGGGCTCCTGCACCCCTaGCACATGCCCTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PAENGPTPGRCVTGSDAVGLLHP*HMPCPQ
Trigger: TTGAGGACAGGGCATGTGGCAGGGGTGCAGGAGCCC...CACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCTCCTCTGGGATGGGCTaGCAATCACCATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCSSGMG*QSPWQQ
Trigger: CTGCTGCCATGGTGATTGGCAGCCCATCCCAGAGGA...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR GCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGATCAGAATGTCGCTGTaGTGGAGATCCCTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: AILGLASEELAAGAPCALIRMSL*WRSLRP
Trigger: GGGACGGAGGGATCTCCAGCACAGCGACATTCTGAT...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTCAGACTTCTGGTGTCTaGGACTCGACCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPQTSGV*DSTYGP
Trigger: TGGGCCATAGGTCGAGTCCCAGACACCAGAAGTCTG...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: AILGLASEELAAGAPCALSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp AGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTACCCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: RSWRRAHRVPWPAGMALTPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...GGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CCA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RATCPALALHADHLTGAPGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTACTCTGCAAGCTACTaGCGAGGAAGGCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WPAAILGLASEELAAGAPYSASY*RGRQAR
Trigger: CCTTGCCTGCCTTCCTCGCCAGTAGCTTGCAGAGTA...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR CCA 90 bp CCGCTGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCAGGTGTGTGGGGAGCAGCTGTaGCCAGGCCGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLWPGYRMEHPFWVAWQVCGEQL*PGRGLG
Trigger: CCCCAGACCCCGGCCTGGCCACAGCTGCTCCCCACA...CACCTGCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCGGTGGGAGGCCTCGGTaGGAGGCCAGCTTCCCGACT +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALGGRPR*EASFPT
Trigger: AGTCGGGAAGCTGGCCTCCCACCGAGGCCTCCCACC...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGCTCTCGAGGTGCACTaGGGAGCGGCCAACCCGCCT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAALEVH*GAANPP
Trigger: AGGCGGGTTGGCCGCTCCCCAGTGCACCTCGAGAGC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp AGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTACCTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RSWRRAHRVPWPAGMALTLTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...GGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR TCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCACATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTCCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPRKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPCPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGCGCTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: YPQQPVTVGSRPERLEMRCPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...GCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQACPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGLSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCATGGCCAGGGCTCCTaGACCCCTGCCACATGCCCT +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALHGQGS*TPATCP
Trigger: AGGGCATGTGGCAGGGGTGCAGGAGCCCTGGCCATG...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCGGTTGCTCTCGAGGTaGACTGGGGAGCGGCCAACC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQARLLSR*TGERPT
Trigger: GGTTGGCCGCTCCCCAGTGCACCTCGAGAGCAACCG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGGCTGGGCGGCCTCCTTaGCACAAGCCAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSAGRPP*HKPGHQ
Trigger: CTGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGC...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp CCAGCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTGACCTTCCTTCCCAGCTaGGCGGCCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: PAENGPTPGRCVTGSDAVTFLPS*AASLAQ
Trigger: TTGTGCCAAGGAGGCCGCCCAGCTGGGAAGGAAGGT...CACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALTCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: PAYLGLASEELAAGAPCASEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCAGCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTGGACTGCAGCCCCCTGTaGGGCAGCAACTTGAGATGC +
Preference number: 4 (lower is better)
Translates to: PAENGPTPGRCVTGSDAVDCSPL*GSNLRC
Trigger: GCATCTCAAGTTGCTGCCCCACAGGGGGCTGCAGTC...CACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GAGATGCCCGACTTTAGCCCACCCGGGACACCTTCCACGCCAACATCCACCTGGCCCAGGTGGGCTGGATaGCACGGGCTGAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: EMPDFSPPGTPSTPTSTWPRWAG*HGLRAH
Trigger: GTGGGCCCTCAGCCCGTGCCATCCAGCCCACCTGGG...CCAGGTGGATGTTGGCGTGGAAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGGCTGCCAATCACCATaGCAGCAGGAAATGCAGATG +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPGCQSP*QQEMQM
Trigger: CATCTGCATTTCCTGCTGCCATGGTGATTGGCAGCC...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGGGTGTGCCCAGCCTTaGGGGTTCCAGCACCGTCCT +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALGCAQP*GFQHRP
Trigger: AGGACGGTGCTGGAACCCCCAAGGCTGGGCACACCC...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462330.5
3UTR CAA 72 bp CATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATCTCACAGGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HPCGAHGPPVQH*RSTLTISQALQ
Trigger: CTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTCATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPCCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQACCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGCGCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLSSLSPWGPGLSAWRCAGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...TGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR TCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALALVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCRKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVERGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGARGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTACTTGCGCTCCACGCTaGCCATCTCACAGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALTCAPR*PSHRRS
Trigger: GGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGT...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSQASQQ*RLVHQL
Trigger: AAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTGACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAHRVPWPAGMALTLSSLTPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...CAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQASSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp ACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGCGCAGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: TLSSLSPWGPGLSAWRCAGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...TGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCAGCGCCACCGCCATTaGCGCCATCGTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGAQRHRH*RHRRGA
Trigger: AGCCCCACGACGATGGCGGCAATGGCGGTGGCGCTG...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400521.7
ENST00000400525.6
CDS-3UTR GCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGPVASH*LLLGQP
Trigger: GGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGG...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RATCPALALHADHLTGAPTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCAAGAGCCAGCCCCACCTaGATACCTGGGTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSRASPT*IPGSGL
Trigger: GAGGCCAGACCCAGGTATGCAGGTGGGGCTGGCTCT...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACTCCGTCCCAGGGTGTaGCCAGCCTTGGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISLRPRV*PALGVP
Trigger: TGGAACCCCCAAGGCTGGGCACACCCTGGGACGGAG...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGCTGGGCGGCCTCCTTaGCACAAGCCAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPAGRPP*HKPGHQ
Trigger: CTGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGC...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCCCAAATTCAGACTTCTaGTGTCTGGGACTCGACCTA +
Preference number: 4 (lower is better)
Translates to: ASEELAAGAPCALACRDGPNSDF*CLGLDL
Trigger: TAGGTCGAGTCCCAGACACCAGAAGTCTGAATTTGG...GCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCATGTGGGGCACAGAGGTaGCTTCCCGGGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RATCPALALHADHLTGAPCGAQR*LPGSPP
Trigger: TGGTGGACTCCCGGGAAGCCACCTCTGTGCCCCACA...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGTGTGGGGCACAGAGGTaGCTTCCCGGGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQACGAQR*LPGSPP
Trigger: TGGTGGACTCCCGGGAAGCCACCTCTGTGCCCCACA...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEATCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISTCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCATGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCCCCACCTGCATACCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSPHLHT*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGTATGCAGGTGGGG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GAGATGCCCGACTTTAGCCCACCCGGGACACCTTCCACGCCAACATCCACCTGGGCAGGAGCCAGGCCTTaGTGGGAGGCCTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EMPDFSPPGTPSTPTSTWAGARP*WEASVG
Trigger: TCCCACCGAGGCCTCCCACCAAGGCCTGGCTCCTGC...CCAGGTGGATGTTGGCGTGGAAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGTGCCCCAGGTGGGCTaGATGGCACGGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSVPQVG*MARAEG
Trigger: GCCCTCAGCCCGTGCCATCCAGCCCACCTGGGGCAC...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTCCAGCACCGTCCTCTaGGATGGGCTGCCAATCACC +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTSSTVL*DGLPIT
Trigger: GGTGATTGGCAGCCCATCCCAGAGGACGGTGCTGGA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR TCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: AILGLASEELAAGAPCALVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSRNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGATGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGCCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQECCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAHTPAG*RRSWEH
Trigger: ATGTTCCCACGACCGTCTTCACCCCGCTGGAGTATG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHHTPAG*RRSWEH
Trigger: ATGTTCCCACGACCGTCTTCACCCCGCTGGAGTATG...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGARWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAGAAATGAGCGGGCGCTaGACTCTGCAGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISEMSGR*TLQEPG
Trigger: GCCTGGCTCCTGCAGAGTTCAGCGCCCGCTCATTTC...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AYPQQPVTVGSRPERLEMSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...CATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVECPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCTGGGGCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PQGRFPPRSSSSGTRSLGPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...CCCCAGGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCCCCCAAACCTGGCCTaGAGCCATCCTGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGPPNLA*SHPGSG
Trigger: GCCAGACCCAGGATGGCTGCAGGCCAGGTTTGGGGG...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: RATCPALALHADHLTGAPAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTGCTAGGCAGCAACTTGAGATaGCCGACTTTAGCCCACCCG +
Preference number: 4 (lower is better)
Translates to: AENGPTPGRCVTGSDAVLGSNLR*PTLAHP
Trigger: CGGGTGGGCTAAAGTCGGGCATCTCAAGTTGCTGCC...TAGCACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp TGTCACCGCTGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCGCGGGCGCTGAACTCTaGAGGAGCCAGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CHRCGLVTGWSTHSGWRGAGAEL*RSQALV
Trigger: CACCAAGGCCTGGCTCCTGCAGAGTTCAGCGCCCGC...GCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCCGGTCAGCCTGGCTCTaGAGAGCTGGAACAGAACCA +
Preference number: 4 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRRSAWL*RAGTEP
Trigger: TGGTTCTGTTCCAGCTCTGCAGAGCCAGGCTGACCG...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGGAGCCCACTGCTCTaGCTGGTCTCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPGSPLL*LVSTSA
Trigger: GGCTGAGGTGGAGACCAGGCAGAGCAGTGGGCTCCC...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCACCCCAGGGCGATaGGTCACAGGGAGCGACGCG +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHPTPGR*VTGSDA
Trigger: CGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGCATGGCAGCAGGAAATaGAGATGTTGTTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGHGSRK*RCCLAF
Trigger: GAATGCCAAACAACATCTGCATTTCCTGCTGCCATG...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCACAGGCCTTCACGGTTaGTCTCGAGGTGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQATGLHG*SRGALG
Trigger: CCCCAGTGCACCTCGAGAGCAACCGTGAAGGCCTGT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEAPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCATGTCCCACGGTGGTaGGGAGACACGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAHVPRW*GDTQRC
Trigger: GCATCTCTGCGTGTCTCCCCACCACCGTGGGACATG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCAGCATGTCCCACGGTaGTGGGGAGACACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAQHVPR*WGDTQR
Trigger: TCTCTGCGTGTCTCCCCACCACCGTGGGACATGCTG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGATGTGGGGCACAGAGGTaGCTTCCCGGGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGCGAQR*LPGSPP
Trigger: TGGTGGACTCCCGGGAAGCCACCTCTGTGCCCCACA...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPTCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGTCACCGCTGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCCTGCATACCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: CHRCGLVTGWSTHSGWRGLHTWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAG...GCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTGCTATGCCTGTCACCGCTGTaGCCTGGTTACAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: AENGPTPGRCVTGSDAVLCLSPL*PGYRME
Trigger: CTCCATCCTGTAACCAGGCCACAGCGGTGACAGGCA...TAGCACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGGAGGTTTGGGCCCCTaGGAACTTCCCCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQGGLGP*ELPLLP
Trigger: AGGCAGAAGGGGAAGTTCCCAGGGGCCCAAACCTCC...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGATACCTCCTGTGTGTaGGGAGCAGCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQDTSCV*GAAVAR
Trigger: CCTGGCCACAGCTGCTCCCCACACACAGGAGGTATC...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACAAACACCCCAACCCTaGGAGGGGCTGACAGCCATG +
Preference number: 4 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSQTPQP*EGLTAM
Trigger: CATGGCTGTCAGCCCCTCCCAGGGTTGGGGTGTTTG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGATGGGGGAGCCCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQADGGAL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGGCTCCCCCATC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475995.3
3UTR CAA 72 bp CAGCTTCCCGACTGCAGCCCCCTGTGGGGCAGCAACTaGAGATGCCCGACTTTAGCCCACCCGGGACACCTT +
Preference number: 4 (lower is better)
Translates to: QLPDCSPLWGSN*RCPTLAHPGHL
Trigger: AAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTCAAGTTGCTGCCCCACAGGGGGCTGCAGTCGGGAAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTLTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHLTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEAVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPHTPAG*RRSWEH
Trigger: ATGTTCCCACGACCGTCTTCACCCCGCTGGAGTATG...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCAGCAGTGCCGCCTGGTaGATCAGCTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPSSAAW*ISFLGM
Trigger: CATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCT...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALATPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTTPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCATCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGACAGCGCCACCGCCATTaGCGCCATCGTCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGQRHRH*RHRRGA
Trigger: AGCCCCACGACGATGGCGGCAATGGCGGTGGCGCTG...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400521.7
ENST00000400525.6
CDS-3UTR GCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: AGAPCALACRDGAYPQQPLSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...AGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHGGRTV*PGLQGW
Trigger: CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCC...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEAAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCTCAGCCTTTTTAGCCTaGAAAAGGTGTCATCGTGTC +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCASAFLA*KRCHRV
Trigger: GACACGATGACACCTTTTGCAGGCTAAAAAGGCTGA...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGGAGACACGCAGAGATaGAAGGTGCTGGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAGDTQR*KVLGMA
Trigger: TGCCATCCCCAGCACCTTGCATCTCTGCGTGTCTCC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGACCTTCCTTCCCAGCTaGGCGGCCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQETFLPS*AASLAQ
Trigger: TTGTGCCAAGGAGGCCGCCCAGCTGGGAAGGAAGGT...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCACCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACTGGGACTCGACCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSLGLDL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGTCGAGTCCCAG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCTGGGACTCGACCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALLGLDL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGTCGAGTCCCAG...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCCCAAATTCAGACTTCTaGTGTCTGGGACTCGACCTA +
Preference number: 4 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRPNSDF*CLGLDL
Trigger: TAGGTCGAGTCCCAGACACCAGAAGTCTGAATTTGG...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCCCACCACGTCACCAATaGCGTAGATGTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPPPRHQ*RRCGAQ
Trigger: CTGTGCCCCACATCTACGCCATTGGTGACGTGGTGG...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: AAILGLASEELAAGAPCAHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCACAGCCATCCTGGGTCTaGCCTCCGAGGAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPQPSWV*PPRSWR
Trigger: CCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTG...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATGCGCAGCTTGACTACCTCCTCAGAGCATGTGGGATGGATACCCACGGTCCGCGGCCTGCAGCCATCCTaGGTCTGGCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: MRSLTTSSEHVGWIPTVRGLQPS*VWPPRS
Trigger: GCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCC...GCGGACCGTGGGTATCCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTTGGTCCTCCATGGTaGCTCACTGCACATAGTGCC +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALALGPPW*LTAHSA
Trigger: GGCACTATGTGCAGTGAGCCACCATGGAGGACCAAG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR CCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCGCCTTGCTGTACACCTaGAGGGAGCCCATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSALLYT*REPMAR
Trigger: CCTGGCCATGGGCTCCCTCCAGGTGTACAGCAAGGC...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGGCCTGGTTACAGGATaGAGCACCCATTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALGLVTG*STHSGW
Trigger: CCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCC...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGGTCACCGCTGTGGCCTaGTTACAGGATGGAGCACCC +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEVTAVA*LQDGAP
Trigger: GGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGAC...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQGCSPR*RRCRRG
Trigger: GCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCC...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQARNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQARNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGCATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SLFALQKCQGARTWVPTGHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCATGAGGACACCTGGCTaGTGCCGTCTCAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAMRTPG*CRLSLF
Trigger: GAAGAGACTGAGACGGCATCAGCCAGGTGTCCTCAT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCTAGTTGATCCTCGATaGGGACACCTGGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQALVDPR*GHLADA
Trigger: GGCATCAGCCAGGTGTCCTCATCGAGGATCAACTAG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: ILGLASEELAAGAPCALAILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCCCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQELGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCATTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISLGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVEAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTGGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: PGLQGWRLPSAACHRGVQFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...CTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTGAGGCCAGGAGCCCTTaGCAGTTTCTTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGEARSP*QFLPPQ
Trigger: CTGGGGAGGAAGAAACTGGCAAGGGCTCCTGGCCTC...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCGCCCAGGCCGGAGGATaGACTATTAGACCACGAGGC +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSAQAGG*TIRPRG
Trigger: GCCTCGTGGTCTAATAGTGCATCCTCCGGCCTGGGC...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGACCTTCCTTCCCAGCTaGGCGGCCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGETFLPS*AASLAQ
Trigger: TTGTGCCAAGGAGGCCGCCCAGCTGGGAAGGAAGGT...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGCCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCTCGATGAGGACACCTaGCTGATGCCGTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQALDEDT*LMPSQS
Trigger: AGACTGAGACGGCATCAGCCAGGTGTCCTCATCGAG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCAGACTTCTGGTGTCTaGGACTCGACCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQQTSGV*DSTYGP
Trigger: TGGGCCATAGGTCGAGTCCCAGACACCAGAAGTCTG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGCCACCACGTCACCAATaGCGTAGATGTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEPPRHQ*RRCGAQ
Trigger: CTGTGCCCCACATCTACGCCATTGGTGACGTGGTGG...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCACCACGTCACCAATaGCGTAGATGTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEAPPRHQ*RRCGAQ
Trigger: CTGTGCCCCACATCTACGCCATTGGTGACGTGGTGG...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACACATGCTCCTGCCCGTaGCGAGCCACTGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHTCSCP*RATASS
Trigger: GGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGT...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCATCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: RATCPALALHADHLTGAPSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGCACCCATTCTGGGTaGCGTGGCAGGTGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQESTHSG*RGRCSL
Trigger: AAGGCTACACCTGCCACGCCACCCAGAATGGGTGCT...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCTGGGGATGGCAAGATaGGCACAGCCTAGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQALGMAR*AQPSVS
Trigger: ACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CCA 90 bp ATGCGCAGCTTGACTACCTCCTCAGAGCATGTGGGATGGATACCCACGGTCCGCACCGGGTGCCCTCCTTaGCACAAGCCAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: MRSLTTSSEHVGWIPTVRTGCPP*HKPGHQ
Trigger: CTGGTGGCCTGGCTTGTGCCAAGGAGGGCACCCGGT...GCGGACCGTGGGTATCCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
3UTR CAA 72 bp CAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACTACCTCCTCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QQPVTVGSRPER*EMRSLTTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCGCSPR*RRCRRG
Trigger: GCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCC...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEARNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTTCCACCAGGATCTTCTaGGTGTCGGGGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALSTRIF*VSGLVS
Trigger: AGATACTAGCCCCGACACTCAGAAGATCCTGGTGGA...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: AHGPPVQHLRSTLTISQARKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLRKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGTGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGCGTGGGGTCCAGGCCTaGGCGCTTGGAGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQRGVQA*ALGDAQ
Trigger: CTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACG...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGTCACCGCTGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCTGGGAGATAGGGAAATaGGCGGGCGCTGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: CHRCGLVTGWSTHSGWRGWEIGK*AGAELC
Trigger: GCAGAGTTCAGCGCCCGCTCATTTCCCTATCTCCCA...GCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTAGCAGTGCCGCCTGGTaGATCAGCTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGSSAAW*ISFLGM
Trigger: CATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCT...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCACAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPQASQQ*RLVHQL
Trigger: AAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTG...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAAGGGAGATGGGTGAGAAATAAACCCAGCAGAGAATGGCCCCACCCCAGGGCGATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: QGRWVRNKPSREWPHPRAIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...CGCCCTGGGGTGGGGCCATTCTCTGCTGGGTTTATTTCTCACCCATCTCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: PAYLGLASEELAAGAPCAILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCACCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGELGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGCATGTGCTCCTGACGTaGAGCTTGATCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQHVLLT*SLICTS
Trigger: TGACGTGCAGATCAAGCTGCACGTCAGGAGCACATG...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGACCTTCCTTCCCAGCTaGGCGGCCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLTFLPS*AASLAQ
Trigger: TTGTGCCAAGGAGGCCGCCCAGCTGGGAAGGAAGGT...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCTGGGACTCGACCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSLGLDL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGTCGAGTCCCAG...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGCTGGGACTCGACCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVELGLDL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGTCGAGTCCCAG...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGACAGACTTCTGGTGTCTaGGACTCGACCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGQTSGV*DSTYGP
Trigger: TGGGCCATAGGTCGAGTCCCAGACACCAGAAGTCTG...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGATGTGGGGCACAGAGGTaGCTTCCCGGGAGTCCACCA +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGCGAQR*LPGSPP
Trigger: TGGTGGACTCCCGGGAAGCCACCTCTGTGCCCCACA...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGCCACCACGTCACCAATaGCGTAGATGTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGEPPRHQ*RRCGAQ
Trigger: CTGTGCCCCACATCTACGCCATTGGTGACGTGGTGG...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GAGCGCTTGGAGATGCGCAGCTTGACTACCTCCTCAGAGCATGTGGGATGGATAGCCCAGCACCAGCTGTaGGGGCTCCCTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: ERLEMRSLTTSSEHVGWIAQHQL*GLPQAH
Trigger: GTGTGCCTGAGGGAGCCCCCACAGCTGGTGCTGGGC...TATCCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGEPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAGGATGGAGAAGGGACTaGAGGGAGGAAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISGWRRD*REEVER
Trigger: CCTCTCTACTTCCTCCCTCCAGTCCCTTCTCCATCC...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR CCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGAGAATGTCGCTGTGCTaGAGATCCCTCCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGERMSLC*RSLRPR
Trigger: CCTGGGACGGAGGGATCTCCAGCACAGCGACATTCT...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
3UTR CAA 72 bp GTGGGGTCCAGGCCTGAGCGCTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCATGTGGGATGGATACCC +
Preference number: 4 (lower is better)
Translates to: VGSRPERLEMRS*TTSSEHVGWIP
Trigger: GGGTATCCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR TCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGELTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHLTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQADDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGTCACCGCTGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: CHRCGLVTGWSTHSGWRGRNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...GCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGGASRP*SLWVSA
Trigger: AGCTGACACCCATAGCGATCATGGCCGGGAGGCTCC...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFVVHQI*GPAEEP
Trigger: CGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTAC...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRHTPAG*RRSWEH
Trigger: ATGTTCCCACGACCGTCTTCACCCCGCTGGAGTATG...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: HLRSTLTISQALQERVEARKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...GGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCATGAGCCCCGTTTCTTaGTACCTCCTGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGAMSPVS*YLLCVG
Trigger: CCCCACACACAGGAGGTATCAAGAAACGGGGCTCAT...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp GCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGACGGTCCGCATCACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: AYPQQPVTVGSRPERLEMTVRIT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGATGCGGACCGT...CATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR GCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTCAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGQASQQ*RLVHQL
Trigger: AAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTG...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPTPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVETPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCCCAAACCTGGCCTGCAGCCATCCTGCCAACAACAGGAAGGTCAGCACAGGTCCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: PQTWPAAILPTTGRSAQVPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...GACCTGTGCTGACCTTCCTGTTGTTGGCAGGATGGCTGCAGGCCAGGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTACCTCAACATGCTCCTaGCCGTGGCGAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGTSTCS*PWRATA
Trigger: GGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGT...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: HGPPVQHLRSTLTISQALYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLLGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPLSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQLSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCAGAGGCTGAGAGGTaGAGGGGTGAGGTGGACAGT +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGAEAER*RGEVDS
Trigger: ACTGTCCACCTCACCCCTGCACCTCTCAGCCTCTGC...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCATTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGACCCCCAAACCTGGCCTaGAGCCATCCTGCCAACAAC +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGPPNLA*SHPANN
Trigger: GTTGTTGGCAGGATGGCTGCAGGCCAGGTTTGGGGG...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTGCTGGGCGGCCTCCTTaGCACAAGCCAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCAGRPP*HKPGHQ
Trigger: CTGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGC...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGCTGGGACTCGACCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLLGLDL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGTCGAGTCCCAG...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GAGTTTCCTCAGGATGCCCTTTGTTTATCCCTATCGAGCGCGGCCCCGCCGGGGCAGACTTCTGGTGTCTaGGACTCGACCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: EFPQDALCLSLSSAAPPGQTSGV*DSTYGP
Trigger: TGGGCCATAGGTCGAGTCCCAGACACCAGAAGTCTG...CCCCGGCGGGGCCGCGCTCGATAGGGATAAACAAAGGGCATCCTGAGGAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCCAAATTCAGACTTCTaGTGTCTGGGACTCGACCTA +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTPNSDF*CLGLDL
Trigger: TAGGTCGAGTCCCAGACACCAGAAGTCTGAATTTGG...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACTGTCCACAGGCATCTTaGGGGGAGCCCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHCPQAS*GEPTAL
Trigger: CAGAGCAGTGGGCTCCCCCCAAGATGCCTGTGGACA...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLRNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GAGATGCCCGACTTTAGCCCACCCGGGACACCTTCCACGCCAACATCCACCTGGTCCACCAGGATCTTCTaGGTGTCGGGGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: EMPDFSPPGTPSTPTSTWSTRIF*VSGLVS
Trigger: AGATACTAGCCCCGACACTCAGAAGATCCTGGTGGA...CCAGGTGGATGTTGGCGTGGAAGGTGTCCCGGGTGGGCTAAAGTCGGGCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCATCCACCAGGATCTTCTaGGTGTCGGGGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPSTRIF*VSGLVS
Trigger: AGATACTAGCCCCGACACTCAGAAGATCCTGGTGGA...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGCCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGEPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGRKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSTPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCACCTTAATAAGCAATTaGTCAAGGGCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQATLISN*SRAREG
Trigger: GCCTTCCCTGGCCCTTGAGCAATTGCTTATTAAGGT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTGGCGGAGGTTGCCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCGGGCH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGCAACCTCCGCC...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSLSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTGGGCTCGGACATGGGTaGCCACAGGGTAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGGLGHG*PQGRFP
Trigger: TGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGTTTGCATTGCAGAAATaGCAGGGGGCTCGGACATGG +
Preference number: 4 (lower is better)
Translates to: TCPALALHADHLTGAPGEFALQK*QGARTW
Trigger: CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAA...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCGGCCTGCAGCCATCCTaGCAACAACAGGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFGLQPS*QQQEGQ
Trigger: CTGACCTTCCTGTTGTTGGCAGGATGGCTGCAGGCC...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GGACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTACGTGCAGCTTGATCTaGACGTCACAGTCCATAACA +
Preference number: 4 (lower is better)
Translates to: GQSPEPSLWGTRATCPALTCSLI*TSQSIT
Trigger: TGTTATGGACTGTGACGTGCAGATCAAGCTGCACGT...AAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCACCACGTCACCAATaGCGTAGATGTGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHPPRHQ*RRCGAQ
Trigger: CTGTGCCCCACATCTACGCCATTGGTGACGTGGTGG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: PEPSLWGTRATCPALALHHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALAHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTAAACCCAGCAGAGAATaGCCCCACCCCAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGKPSRE*PHPRAM
Trigger: CATCGCCCTGGGGTGGGGCCATTCTCTGCTGGGTTT...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: ATCPALALHADHLTGAPGVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALARCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTRCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCCCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCTCCACCAGGATCTTCTaGGTGTCGGGGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGSTRIF*VSGLVS
Trigger: AGATACTAGCCCCGACACTCAGAAGATCCTGGTGGA...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGAGGAAGCCCCACACTTaGTCCCCAGAGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: GSDMGAHRVGFHPGRHHLRKPHT*SPEQIL
Trigger: AAGGATTTGCTCTGGGGATCAAGTGTGGGGCTTCCT...CAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGATGGAGATGCGCAGCTTaGCTACCTCCTCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGWRCAA*LPPQSM
Trigger: CATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCA...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCQASQQ*RLVHQL
Trigger: AAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACACCGCCGAAGAGCCGCTaGACCAGGAGCCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTPPKSR*TRSLPA
Trigger: GGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGG...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVEYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCTACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QHLRSTLTISQALQERVELSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR GCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTGCACCCCTGCCACATaGCCTGTCCTCAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGCTPAT*PVLKQS
Trigger: GCTCTGTTTGAGGACAGGGCATGTGGCAGGGGTGCA...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGAGCTATGTCTCCCACTaGCACACCCAGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQSYVSH*HTQGPP
Trigger: TGGGGGTCCCTGGGTGTGGCAGTGGGAGACATAGCT...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGTTGGCATTCCAGAAATaGATAGAGATCCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QSPEPSLWGTRATCPALALAFQK*IEIRGD
Trigger: ATCTCCACGGATCTCTATGCATTTCTGGAATGCCAA...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp CCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGCCAAATTCAGACTTCTaGTGTCTGGGACTCGACCTA +
Preference number: 4 (lower is better)
Translates to: PPVQHLRSTLTISQALQEPNSDF*CLGLDL
Trigger: TAGGTCGAGTCCCAGACACCAGAAGTCTGAATTTGG...CTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCTCAGAGCATGTGGGATaGATACCCACGGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFSEHVG*IPTVRI
Trigger: GATGCGGACCGTGGGTATCCATCCCACATGCTCTGA...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTCCTCCTCAGAGCATGTaGGATGGATACCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGPPQSM*DGYPRS
Trigger: GGACCGTGGGTATCCATCCCACATGCTCTGAGGAGG...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDWPPRS*RRAHRV
Trigger: CACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCA...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LRSTLTISQALQERVEAPRCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLGMARWAQPSVSAAPQARCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR TCA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGAMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCTGGGGATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: PQGRFPPRSSSSGTRSLGMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...CCCCAGGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGATCCACCAGGATCTTCTaGGTGTCGGGGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGSTRIF*VSGLVS
Trigger: AGATACTAGCCCCGACACTCAGAAGATCCTGGTGGA...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGACCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAAACCCTGGGAGGGGCTaGCAGCCATGGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTNPGRG*QPWGCP
Trigger: GGGGCACCCCCATGGCTGTCAGCCCCTCCCAGGGTT...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGAGCAGTGCCGCCTGGTaGATCAGCTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLFALQKCQGARTWVPTGSSAAW*ISFLGM
Trigger: CATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCT...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLFALQKCQGARTWVPTGLGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGTTGGGGCCAAGGAAATaGAGGCCCAGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQLGPRK*RPSTSC
Trigger: ACAGCTGGTGCTGGGCCTGCATTTCCTTGGCCCCAA...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGGCCAGCTTCCCGACTaGAGCCCCCTGTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTGQLPD*SPLWGS
Trigger: GCTGCCCCACAGGGGGCTGCAGTCGGGAAGCTGGCC...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR GCA 90 bp GGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGAGAGTTTCCTCAGGATaGCCTTTGTTTATCCCTATC +
Preference number: 4 (lower is better)
Translates to: GAHGPPVQHLRSTLTISQRVSSG*PLFIPI
Trigger: GATAGGGATAAACAAAGGGCATCCTGAGGAAACTCT...CTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTACCTTCCTTCCCAGCTaGGCGGCCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCTFLPS*AASLAQ
Trigger: TTGTGCCAAGGAGGCCGCCCAGCTGGGAAGGAAGGT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCTGCTTGGTCCTCCATaGTGGCTCACTGCACATAGT +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHLLGPP*WLTAHS
Trigger: ACTATGTGCAGTGAGCCACCATGGAGGACCAAGCAG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR CCA 90 bp TTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTACACCGTCCTCTGGGATaGGCTGCCAATCACCATGGC +
Preference number: 4 (lower is better)
Translates to: FICIAEMPGGSDMGAHRVHRPLG*AANHHG
Trigger: GCCATGGTGATTGGCAGCCCATCCCAGAGGACGGTG...TACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR TCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISRCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCAATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACGGCGGAGGTTGCCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYGGGCH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGCAACCTCCGCC...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GCCCTTGCCAGTTTCTTCCTCCCCAGAAGAGGTCACGATGAACAACATGCCCCCACGCCAACATCCACCTaGGATAGGCTGCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: ALASFFLPRRGHDEQHAPTPTST*DRLLRM
Trigger: CATCCTTAGCAGCCTATCCCAGGTGGATGTTGGCGT...GGGGGCATGTTGTTCATCGTGACCTCTTCTGGGGAGGAAGAAACTGGCAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTTTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCLTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGARCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSRCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCRNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp TTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: FICIAEMPGGSDMGAHRVRNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...TACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCACATCAGGGAGCCTCCTaGCCCGCGAGGGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAHQGAS*PARGHS
Trigger: GCTGTGCCCCCTCGCGGGTCAGGAGGCTCCCTGATG...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTGGCTGCAGTGAGCTATaGTCACACCACCACACTCCT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCGCSEL*SHHHTP
Trigger: AGGAGTGTGGTGGTGTGATCATAGCTCACTGCAGCC...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp GAGCGCTTGGAGATGCGCAGCTTGACTACCTCCTCAGAGCATGTGGGATGGATACCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTG +
Preference number: 4 (lower is better)
Translates to: ERLEMRSLTTSSEHVGWIPRANP*VTSPAL
Trigger: CAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGG...TATCCATCCCACATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR TCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAAGGTGGACAGTCCCCTaGGCCATCCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTRWTVP*AIPVGH
Trigger: GTGCCCCACAGGGATGGCTCAGGGGACTGTCCACCT...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCTPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EKVPSLFALQKCQGARTWSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTGGAGACACGCAGAGATaGAAGGTGCTATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCGDTQR*KVLWPT
Trigger: TGTGGGCCATAGCACCTTGCATCTCTGCGTGTCTCC...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCCCGGGAGGCGGAGGTTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCPGGGG*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCAACCTCCGCCTCCCGG...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCTCGATGAGGACACCTaGCTGATGCCGTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCLDEDT*LMPSQS
Trigger: AGACTGAGACGGCATCAGCCAGGTGTCCTCATCGAG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGCAGCCTGTCACCGTaGGGTCCAGGCCTGAGCGCT +
Preference number: 4 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDSSLSP*GPGLSA
Trigger: AGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCT...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTGCTGTCCTCCCAGGTaGCCTGCAGCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKCCPPR*PAAGHQ
Trigger: CTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCA...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAATCTTCCTCCAGTCATaGGGCACGGGCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTIFLQS*GTGWAT
Trigger: GGTGGCCCAGCCCGTGCCGCATGACTGGAGGAAGAT...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTCCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTACCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: FICIAEMPGGSDMGAHRVPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...TACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTCCTCCCAGGTGACCTaGAGCTGGCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKSSQVT*SWPSGS
Trigger: GCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGA...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCTGCCCGTGTCCTCCTTaGCGGTGGTGCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFCPCPP*RWCCPP
Trigger: GGGAGGACAGCACCACCGGCAAGGAGGACACGGGCA...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGTCATCGTGTCTACTCTaGAAGCTACTGGCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQSSCLL*KLLARK
Trigger: CTTCCTCGCCAGTAGCTTGCAGAGTAGACACGATGA...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR GCA 90 bp TCAGCCACCCACCCCTCACATCAGCCTAGCTATGTCTCCCACTGCCACACCCAGCAGGGAGCGACGCGGTaGTACAAAAATATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SATHPSHQPSYVSHCHTQQGATR*YKNILK
Trigger: TTTCAAAATATTTTTGTAGCACCGCGTCGCTCCCTG...CTGGGTGTGGCAGTGGGAGACATAGCTAGGCTGATGTGAGGGGTGGGTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCACCTTCGATGTGCGTaGGGTATCTCGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHHLRCA*GISAAL
Trigger: GAGGGCGGCCGAGATACCCCACGCACATCGAAGGTG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACACAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTAGATGCAAGGTGCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCRCKVL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGCACCTTGCATCT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACCAGCATGTCCCACGGTaGTGGGGAGACACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYQHVPR*WGDTQR
Trigger: TCTCTGCGTGTCTCCCCACCACCGTGGGACATGCTG...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp TTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FICIAEMPGGSDMGAHRVDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...TACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACACCAGCCCAATCCCGGTaGGGAAGCCAGCACACTCCA +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTPAQSR*GSQHTP
Trigger: TGGAGTGTGCTGGCTTCCTCACCGGGATTGGGCTGG...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTTCCTGGCCTACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCSWPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTAGGCCAGGA...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACGGGAACTTCCCCTTCTaGCTGTCACCGCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDGNFPF*LSPLWP
Trigger: AGGCCACAGCGGTGACAGGCAGAAGGGGAAGTTCCC...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCCCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACACCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTPSSAA*CISFLG
Trigger: CCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGG...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFQVTCS*PSGSLL
Trigger: CAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTG...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGCATGTCCCACGGTGGTaGGGAGACACGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKHVPRW*GDTQRC
Trigger: GCATCTCTGCGTGTCTCCCCACCACCGTGGGACATG...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGCAGCATGTCCCACGGTaGTGGGGAGACACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKQHVPR*WGDTQR
Trigger: TCTCTGCGTGTCTCCCCACCACCGTGGGACATGCTG...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGCCAAATTCAGACTTCTaGTGTCTGGGACTCGACCTA +
Preference number: 4 (lower is better)
Translates to: SLFALQKCQGARTWVPTGPNSDF*CLGLDL
Trigger: TAGGTCGAGTCCCAGACACCAGAAGTCTGAATTTGG...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACCTAGTTGATCCTCGATaGGGACACCTGGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYLVDPR*GHLADA
Trigger: GGCATCAGCCAGGTGTCCTCATCGAGGATCAACTAG...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAGGACGGTGTCAAAGGTaGCCGTGTCCTCCTTGCCGG +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAGRCQR*PCPPCR
Trigger: CCGGCAAGGAGGACACGGGCACCTTTGACACCGTCC...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCACCTTCCTTCCCAGCTaGGCGGCCTCCTTGGCACAA +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCTFLPS*AASLAQ
Trigger: TTGTGCCAAGGAGGCCGCCCAGCTGGGAAGGAAGGT...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHPPSHS*GHLGSG
Trigger: GCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCATGGAGGACATTTGCTaGTCGAAGCCGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCMEDIC*SKPRRG
Trigger: CCCCCTCCGCGGCTTCGACCAGCAAATGTCCTCCAT...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCCATGTCCCACGGTGGTaGGGAGACACGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCHVPRW*GDTQRC
Trigger: GCATCTCTGCGTGTCTCCCCACCACCGTGGGACATG...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACACTGGGACTCGACCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTLGLDL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGGTCGAGTCCCAG...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATA +
Preference number: 4 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQHRELQ*FIMGVI
Trigger: TATCACGCCCATTATAAACCACTGGAGTTCACGGTG...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGATGAGGACACCTGGCTaGTGCCGTCTCAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKMRTPG*CRLSLF
Trigger: GAAGAGACTGAGACGGCATCAGCCAGGTGTCCTCAT...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAGCAGTGCCGCCTGGTaGATCAGCTTCTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFSSAAW*ISFLGM
Trigger: CATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACACCCTCAGGAACCGGGTaGCATGAGATGCCATGTGCT +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTPSGTG*HEMPCA
Trigger: AGCACATGGCATCTCATGGCACCCGGTTCCTGAGGG...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCATAGTCCCGCTGACCTaGTTCCATGGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCIVPLT*FHGRCL
Trigger: CAGGCACCTGCCATGGAAGCAGGTCAGCGGGACTAT...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACCAGACTTCTGGTGTCTaGGACTCGACCTATGGCCCA +
Preference number: 4 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDQTSGV*DSTYGP
Trigger: TGGGCCATAGGTCGAGTCCCAGACACCAGAAGTCTG...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCRCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAGGATGCTGCGCATCATaGTGGTGGTGTCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAGCCAS*WWCPAQ
Trigger: TTGGGCTGGACACCACCATCATGATGCGCAGCATCC...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAGGTGGAGGCTGCAGTaGGCTATGATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTRWRLQ*AMITPP
Trigger: TGGTGGTGTGATCATAGCTCACTGCAGCCTCCACCT...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGCTGAGATGGGAAGATTaGTTGAGCCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKLRWED*LSLGGG
Trigger: TCCACCTCCCAGGCTCAATCAATCTTCCCATCTCAG...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCACCGGGCAGCAGGGAGTaGGTGTTTAATGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAPGSRE*VFNGDR
Trigger: TCTGTCCCCATTAAACACTCACTCCCTGCTGCCCGG...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCACGCCGCAAACCGTGTaGTCGTCAACAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFTPQTV*SSTKLA
Trigger: AGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACACCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCGGAGACACGCAGAGATaGAAGGTGCTATGGCCCACA +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCGDTQR*KVLWPT
Trigger: TGTGGGCCATAGCACCTTGCATCTCTGCGTGTCTCC...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCCTTGTTAGGTCATCCTaGCCTGCAGCCTCGCACTGT +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCLVRSS*PAASHC
Trigger: ACAGTGCGAGGCTGCAGGGCAGGATGACCTAACAAG...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCATTGACTTTTCTGTCCTaGAGCTGGACACGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAALTFLS*SWTRWP
Trigger: GGGCCACCGTGTCCAGCTTCAGGACAGAAAAGTCAA...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATG +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAARNRVP*DAMCSM
Trigger: CATAGAGCACATGGCATCTCATGGCACCCGGTTCCT...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAATGAGGACACCTGGCTaGTGCCGTCTCAGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAMRTPG*CRLSLF
Trigger: GAAGAGACTGAGACGGCATCAGCCAGGTGTCCTCAT...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAAT +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHLVQPP*TPVVYN
Trigger: ATTATAAACCACTGGAGTTCACGGTGGCTGGACGAG...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACACCGGGTGCCATGAGATaGCATGTGCTCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTPGAMR*HVLYDH
Trigger: ATGGTCATAGAGCACATGGCATCTCATGGCACCCGG...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACCTTAATAAGCAATTaGTCAAGGGCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYTLISN*SRAREG
Trigger: GCCTTCCCTGGCCCTTGAGCAATTGCTTATTAAGGT...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTAGAGATGGATGGTCATaGTGCTTGTACAATATGAAC +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCRDGWS*CLYNMN
Trigger: GTTCATATTGTACAAGCAGCATGACCATCCATCTCT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATACATAACACTGGGATaGATCTCGTCCAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTYITLG*ISSSHR
Trigger: ACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHLSNFA*VGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAA...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAGCCTGTCCTTCTTGTTaGCATAGCAGGGCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTACPSC*HSRALV
Trigger: AACAAGGGCCCTGCTATGGCAACAAGAAGGACAGGC...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAGATGCAAGGTGCTATaGCCCACAGGACGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFRCKVL*PTGRCQ
Trigger: TTGACACCGTCCTGTGGGCCATAGCACCTTGCATCT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCACTCGATGAGGACACCTaGCTGATGCCGTCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAALDEDT*LMPSQS
Trigger: AGACTGAGACGGCATCAGCCAGGTGTCCTCATCGAG...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGCCAAATTCAGACTTCTaGTGTCTGGGACTCGACCTA +
Preference number: 4 (lower is better)
Translates to: EKVPSLFALQKCQGARTWPNSDF*CLGLDL
Trigger: TAGGTCGAGTCCCAGACACCAGAAGTCTGAATTTGG...CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CCA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTACAAATGCTGCAACATaGATGCACCCTGAAAACATT +
Preference number: 4 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCTNAAT*MHPENI
Trigger: AATGTTTTCAGGGTGCATCCATGTTGCAGCATTTGT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTDDVIG*QQNLFP
Trigger: GGGAAAGAGATTCTGCTGTCAGCCGATCACATCATC...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR TCA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCATGCTTCCATGGCAGGTaGCTGTCCTTCTTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAACFHGR*LSFLLP
Trigger: TGGCAACAAGAAGGACAGGCACCTGCCATGGAAGCA...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp CAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: QEGNAGTCYTNANSNKCCVAMMM*SADSRI
Trigger: GATTCTGCTGTCAGCCGATCACATCATCATTGCTAC...GCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCATGCCATGTGCTCTATaGCCATGGAGGACATTTGCT +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFMPCAL*PWRTFA
Trigger: AGCAAATGTCCTCCATGGTCATAGAGCACATGGCAT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCATCCTGGCCTACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RKEMLAHATQMLTLTNAASWPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTAGGCCAGGA...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCACCTTAATAAGCAATTaGTCAAGGGCCAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFTLISN*SRAREG
Trigger: GCCTTCCCTGGCCCTTGAGCAATTGCTTATTAAGGT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACTCAACAGGAAGGAAATaGTGGCACATGCTACACAAA +
Preference number: 4 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYSTGRK*WHMLHK
Trigger: TTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGA...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGAACAACAAACTAGCTTaGCTGGGCACAGTAGCTCAA +
Preference number: 4 (lower is better)
Translates to: AGSECLMGTELSLEIMEKNNKLA*LGTVAQ
Trigger: TTGAGCTACTGTGCCCAGCCAAGCTAGTTTGTTGTT...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR TCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAGTCATTTTTATGTGCTaGAAACAGGCGGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTVIFMC*KQAACA
Trigger: TGCACAAGCCGCCTGTTTTCAGCACATAAAAATGAC...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: SEKVPSLFALQKCQGARTILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCATGCTGCAACATGGATaGACCCTGAAAACATTGTGC +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFMLQHG*TLKTLC
Trigger: GCACAATGTTTTCAGGGTGCATCCATGTTGCAGCAT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CCA 90 bp GCCTTCAACAGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAACAGGAAGGAAATGCTaGCACATGCTACACAAATGC +
Preference number: 4 (lower is better)
Translates to: AFNRKEMLAHATQMLTLTTGRKC*HMLHKC
Trigger: GCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGT...TGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR TCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAGATGTCATCACTTGTaGTTCCATATTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFRCHHL*FHIPRH
Trigger: GTGCCTTGGAATATGGAATCACAAGTGATGACATCT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATG +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFILNSF*HLPPVM
Trigger: CATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAAT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCGGAAATGCTGGCACATaGTACACAAATGCTAACTCT +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFGNAGT*YTNANS
Trigger: AGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCC...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR GCA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAGAGATGGATGGTCATaGTGCTTGTACAATATGAAC +
Preference number: 4 (lower is better)
Translates to: GSECLMGTELSLEIMEKFRDGWS*CLYNMN
Trigger: GTTCATATTGTACAAGCAGCATGACCATCCATCTCT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLASEELAAGAPCALACRVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS CCA 90 bp CAGAGCCAGCCCCACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTaGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTT +
Preference number: 5 (lower is better)
Translates to: QSQPHLHTWVWPPRS*RRAHRVPWPAGMAL
Trigger: AAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGTGGGGCTGGCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400519.6
ENST00000495655.2
CDS TCA 90 bp CTGAGGACCCGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCTCGGAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LRTRRRAAAPGASRP*SLWVSAQAAPRRAA
Trigger: GGCAGCCCTCCGAGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGGGTCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485358.5
CDS CCA 90 bp GTGAGTGCCGCCCCACAGGCCTTCACGGTTGCTCTCGAGGTGCACTaGGGAGCGGCCAACCCGCCTGGCAGCCAGCAGGATGGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: VSAAPQAFTVALEVH*GAANPPGSQQDGGA
Trigger: GGCTCCCCCATCCTGCTGGCTGCCAGGCGGGTTGGCCGCTCCCCAGTGCACCTCGAGAGCAACCGTGAAGGCCTGTGGGGCGGCACTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CAA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: WPAAILGLASEELAAGAPPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: SWVWPPRSWRRAHRVPWPPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...AGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGAGAGGCCAGGAGCCCTaGCCAGTTTCTTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GLASEELAAGAPCALACRRGQEP*PVSSSP
Trigger: TGGGGAGGAAGAAACTGGCAAGGGCTCCTGGCCTCT...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS TCA 90 bp GCAGTGCCGCCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGCCCCACCGGGTGCCCTCCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: AVPPGASASWGCSPR*RRCRRGPTGCPPWH
Trigger: GTGCCAAGGAGGGCACCCGGTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS GCA 90 bp ATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTaGCCTGGCCTGCAGGGATGGCGCTTACCCTCAGCAGCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: IPGSGLRGAGGGRTV*PGLQGWRLPSAACH
Trigger: GTGACAGGCTGCTGAGGGTAAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400519.6
ENST00000495655.2
CDS-3UTR CAA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCAGCTGGGCGGCCTCCTaGGCACAAGCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSSWAAS*AQARPP
Trigger: TGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGCT...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CAA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QSPEPSLWGTRATCPALAGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PEPSLWGTRATCPALALHGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...GTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGCGCTTGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: PRSWRRAHRVPWPAGMALDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...AAGCGCCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CAA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: ILGLASEELAAGAPCALADHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: WPAAILGLASEELAAGAPSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS TCA 90 bp CTGAGGACCCGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCTCCACCACGTCAC +
Preference number: 5 (lower is better)
Translates to: LRTRRRAAAPGASRP*SLWVSAQAAPPPRH
Trigger: GTGACGTGGTGGAGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGGGTCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000487165.5
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
CDS TCA 90 bp CTGAGGACCCGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCTTGGGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: LRTRRRAAAPGASRP*SLWVSAQAAPWGRH
Trigger: GTGCCTTCCCCAAGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGGGTCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495655.2
CDS CCA 90 bp CTTCACGGTTGCTCTCGAGGTGCACTGGGGAGCGGCCAACCCGCCTaGCAGCCAGCAGGATGGGGGAGCCCTATGGCCCACAGGACGGTG +
Preference number: 5 (lower is better)
Translates to: LHGCSRGALGSGQPA*QPAGWGSPMAHRTV
Trigger: CACCGTCCTGTGGGCCATAGGGCTCCCCCATCCTGCTGGCTGCCAGGCGGGTTGGCCGCTCCCCAGTGCACCTCGAGAGCAACCGTGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CAA 90 bp CCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCGCCCCACCGGGTGCCTaGGGGAGAAGGTTCCACGTA +
Preference number: 5 (lower is better)
Translates to: PLSHPCGAHGPPVQHLRSAPPGA*GRRFHV
Trigger: TACGTGGAACCTTCTCCCCAAGGCACCCGGTGGGGC...GGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000542719.6
CDS-3UTR CAA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: ILGLASEELAAGAPCALAVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: AILGLASEELAAGAPCALVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...CAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGAGCTGGGCGGCCTCCTaGGCACAAGCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLSWAAS*AQARPP
Trigger: TGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGCT...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CAA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: TCIPGSGLRGAGGGRTVCDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp GATGGCGCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: DGAYPQQPVTVGSRPERLVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...CAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CAA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CAA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGCAGCGCCACCGCCATaGCCGCCATCGTCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: TCPALALHADHLTGAPGEAAPPP*PPSSWG
Trigger: GCCCCACGACGATGGCGGCAATGGCGGTGGCGCTGC...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400521.7
ENST00000400525.6
CDS-3UTR CAA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: VWPPRSWRRAHRVPWPAGLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...CCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCAGCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: PAENGPTPGRCVTGSDAVPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...CACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS GCA 90 bp ATCCCTCAAAGAGGCCGGGAATGGGCCACGGCAGCAGGGACGCTATaGTCTGGGGACACTCACGTGCGTGGGGTATCTCGGCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: IPQRGREWATAAGTL*SGDTHVRGVSRPPS
Trigger: GGAGGGCGGCCGAGATACCCCACGCACGTGAGTGTCCCCAGAGCATAGCGTCCCTGCTGCCGTGGCCCATTCCCGGCCTCTTTGAGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS CCA 90 bp TCCTCCAGTCATGCGGCACGGGCTGGGCCACCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGCCTCCCAGCAGTGCCGCCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: SSSHAARAGPPPSHS*GHLGSGLPAVPPGA
Trigger: TGCACCAGGCGGCACTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGGTGGCCCAGCCCGTGCCGCATGACTGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS-3UTR CAA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGGCCCCACCGGGTGCCTaGGGGAGAAGGTTCCACGTA +
Preference number: 5 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAAPPGA*GRRFHV
Trigger: TACGTGGAACCTTCTCCCCAAGGCACCCGGTGGGGC...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000542719.6
CDS-3UTR CAA 90 bp TTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCCGCCCCACCGGGTGCCTaGGGGAGAAGGTTCCACGTA +
Preference number: 5 (lower is better)
Translates to: LRSTLTISQALQERVEAPAPPGA*GRRFHV
Trigger: TACGTGGAACCTTCTCCCCAAGGCACCCGGTGGGGC...GGGGGCCTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000542719.6
CDS-3UTR CAA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: ATCPALALHADHLTGAPGVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: WPAAILGLASEELAAGAPPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: AAILGLASEELAAGAPCALEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...GGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: WPAAILGLASEELAAGAPLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...CGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GLASEELAAGAPCALACRPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...CCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp AACCTGGCCTGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: NLACSHPGSGLRGAGGGRPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...GCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCAGGCCAGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: AHGPPVQHLRSTLTISQAPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...CGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCCACAGGCCTTCACGGTaGCTCTCGAGGTGCACTGGG +
Preference number: 5 (lower is better)
Translates to: VLGMARWAQPSVSAAPQAHRPSR*LSRCTG
Trigger: CCCAGTGCACCTCGAGAGCAACCGTGAAGGCCTGTG...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS TCA 90 bp CTGAGGACCCGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCGTTTTCATTCACT +
Preference number: 5 (lower is better)
Translates to: LRTRRRAAAPGASRP*SLWVSAQAAPFSFT
Trigger: AGTGAATGAAAACGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGGGTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS GCA 90 bp ATGGGCGTGATAGACCTCAACATGCTCCTGCCCGTGGCGAGCCACTaGCTCCTCCTCGGACAGCCCCACACAGCCATACTCCAGCGGGGT +
Preference number: 5 (lower is better)
Translates to: MGVIDLNMLLPVASH*LLLGQPHTAILQRG
Trigger: ACCCCGCTGGAGTATGGCTGTGTGGGGCTGTCCGAGGAGGAGGCAGTGGCTCGCCACGGGCAGGAGCATGTTGAGGTCTATCACGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634471.1
ENST00000634537.1
CDS GCA 90 bp AAGCGCGGGACTCCAGAATCTTCCGCATGCCCAGGCCTCAGGCCCTaGTGCAGGGCCACCAGCACAGTGCCAGTGGCTCTGGTACTGACT +
Preference number: 5 (lower is better)
Translates to: KRGTPESSACPGLRP*CRATSTVPVALVLT
Trigger: AGTCAGTACCAGAGCCACTGGCACTGTGCTGGTGGCCCTGCAGCAGGGCCTGAGGCCTGGGCATGCGGAAGATTCTGGAGTCCCGCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS-3UTR CAA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGCCCCACCGGGTGCCTaGGGGAGAAGGTTCCACGTA +
Preference number: 5 (lower is better)
Translates to: QHLRSTLTISQALQERVEAPPGA*GRRFHV
Trigger: TACGTGGAACCTTCTCCCCAAGGCACCCGGTGGGGC...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000542719.6
CDS-3UTR CAA 90 bp GTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTGAGTGCCGCCCCACAGGCCGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: VLGMARWAQPSVSAAPQADHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...GGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS-3UTR CAA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ACCTGCATACCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: TCIPGSGLRGAGGGRTVCPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGTATGCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp TGCAGCCATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: CSHPGSGLRGAGGGRTVCPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...GCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGATGGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS TCA 90 bp CGGGGTGAAGACGGTCGTGGGAACATTGTCGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCAT +
Preference number: 5 (lower is better)
Translates to: RGEDGRGNIVVVHQI*GPAEEPLHQEPPGH
Trigger: ATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTACGACAATGTTCCCACGACCGTCTTCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634537.1
CDS TCA 90 bp AGCGTAGAGGGGCTCCTGGCCTCTGCAGGAGGTGGCAGGCAGGTCTaGAACGGACACTGGTCAGATGACAGCCGGCACAGGAGACAAGGC +
Preference number: 5 (lower is better)
Translates to: SVEGLLASAGGGRQV*NGHWSDDSRHRRQG
Trigger: GCCTTGTCTCCTGTGCCGGCTGTCATCTGACCAGTGTCCGTTTCAGACCTGCCTGCCACCTCCTGCAGAGGCCAGGAGCCCCTCTACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS-3UTR CAA 90 bp AGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: SPLSHPCGAHGPPVQHLRISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...GCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: HGPPVQHLRSTLTISQALVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCCAGCAGAGAATGGCCCCACCCCAGGGCGATGCGTCACAGGGAGCGACGCGGTTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: PSREWPHPRAMRHRERRGLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...ACCGCGTCGCTCCCTGTGACGCATCGCCCTGGGGTGGGGCCATTCTCTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCACCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGGGTTGAGGTCCCGCTGACCTGCTaGGTCCTCCATGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: QHLRSTLTISQALQERVEVPLTC*VLHGGS
Trigger: TGAGCCACCATGGAGGACCAAGCAGGTCAGCGGGAC...CTCAACCCTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS-3UTR CAA 90 bp GACAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCTCCTGACGTGCAGCTaGATCTGCACGTCACAGTCC +
Preference number: 5 (lower is better)
Translates to: DSPLSHPCGAHGPPVQHLLLTCS*ICTSQS
Trigger: GGACTGTGACGTGCAGATCAAGCTGCACGTCAGGAG...CAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS TCA 90 bp CTCCTGACCCGCGAGGGGGCACAGCCCCTCAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATGACCATGGAGGACATTTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: LLTREGAQPLRNRVP*DAMCSMTMEDICWS
Trigger: CGACCAGCAAATGTCCTCCATGGTCATAGAGCACATGGCATCTCATGGCACCCGGTTCCTGAGGGGCTGTGCCCCCTCGCGGGTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000475995.3
ENST00000491939.6
ENST00000494454.5
ENST00000542719.6
ENST00000635155.1
CDS TCA 90 bp CTCTGCAGGAGGTGGCAGGCAGGTCTGAAACGGACACTGGTCAGATaGCAGCCGGCACAGGAGACAAGGCAGGGGTGCCACCGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LCRRWQAGLKRTLVR*QPAQETRQGCHRWK
Trigger: TTTCCACCGGTGGCACCCCTGCCTTGTCTCCTGTGCCGGCTGTCATCTGACCAGTGTCCGTTTCAGACCTGCCTGCCACCTCCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 90 bp CTCCCAGCCATAGTTGGGGGCATCTTGGATCAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTTGAC +
Preference number: 5 (lower is better)
Translates to: LPAIVGGILDQASQQ*RLVHQLLGDAAHVD
Trigger: GTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTATGGCTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS GCA 90 bp GACCCGCGAGGGGGCACAGCCCCTCAGGAACCGGGTGCCATGAGATaGCATGTGCTCTATGACCATGGAGGACATTTGCTGGTCGAAGCC +
Preference number: 5 (lower is better)
Translates to: DPRGGTAPQEPGAMR*HVLYDHGGHLLVEA
Trigger: GGCTTCGACCAGCAAATGTCCTCCATGGTCATAGAGCACATGGCATCTCATGGCACCCGGTTCCTGAGGGGCTGTGCCCCCTCGCGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000475995.3
ENST00000491939.6
ENST00000494454.5
ENST00000542719.6
ENST00000635155.1
CDS CCA 90 bp GACGGAAGCCAGCTCAGCACGGTCCTAAGAGGCCACGTACAGCCCTaGTGTGCAGCAAGAGGTGGCTGGACCTCTCTTGGGGACAGTCCT +
Preference number: 5 (lower is better)
Translates to: DGSQLSTVLRGHVQP*CAARGGWTSLGDSP
Trigger: AGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCCTCTTAGGACCGTGCTGAGCTGGCTTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS-3UTR CAA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GTCACCGTGGGGTCCAGGCCTGAGCGCTTGGAGATGCGCAGCTTGACTACCTCCATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VTVGSRPERLEMRSLTTSIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...GGAGGTAGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGACCCCACGGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CAA 90 bp CACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: HGPPVQHLRSTLTISQALISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...GAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCTGGGGGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: PQGRFPPRSSSSGTRSLGDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...CCCCAGGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: EMPGGSDMGAHRVGFHPGDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...ACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: ATCPALALHADHLTGAPGVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: LSHPCGAHGPPVQHLRSTLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...CGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: TCPALALHADHLTGAPGESRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS CCA 90 bp ACAAGGCAGGGGTGCCACCGGTGGAAACTGGAGTCGGCCTTAGACTaGTTCCTGGCACGCGGGAAAGGAAGAGGCACTTGCCAATGCTGG +
Preference number: 5 (lower is better)
Translates to: TRQGCHRWKLESALD*FLARGKGRGTCQCW
Trigger: CCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAACCAGTCTAAGGCCGACTCCAGTTTCCACCGGTGGCACCCCTGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS CCA 90 bp CCACGTACAGCCCTGGTGTGCAGCAAGAGGTGGCTGGACCTCTCTTaGGGACAGTCCTCATCACCCGGACATGTTCCAGCAGGGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRTALVCSKRWLDLS*GQSSSPGHVPAGSC
Trigger: ACAGCTCCCTGCTGGAACATGTCCGGGTGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS-3UTR CAA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGAGCTGGGCGGCCTCCTaGGCACAAGCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQSWAAS*AQARPP
Trigger: TGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGCT...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000542719.6
CDS-3UTR CAA 90 bp GGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GGSDMGAHRVGFHPGRHHIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...ATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCACCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: ARGLGHGCPQGRFPPRSSPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...TGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCATTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: RATCPALALHADHLTGAPLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GATGGCGCTTACCCTCAGCAGCCTGTCACCGTGGGGTCCAGGCCTGAGCGCTTGTTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: DGAYPQQPVTVGSRPERLLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...CAAGCGCTCAGGCCTGGACCCCACGGTGACAGGCTGCTGAGGGTAAGCGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS-3UTR CAA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: HGCPQGRFPPRSSSSGTRSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...CCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTGCAGGGATGGAAATGCAGATGTTGTTaGGCATTCCAGAAATGCATA +
Preference number: 5 (lower is better)
Translates to: GLRGAGGGRTVCPGLQGWKCRCC*AFQKCI
Trigger: TATGCATTTCTGGAATGCCAAACAACATCTGCATTT...CCATCCCTGCAGGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS-3UTR CAA 90 bp ACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACCACCGGGTGCCCTCCTaGGCACAAGCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: TLFICIAEMPGGSDMGAHHRVPS*AQARPP
Trigger: TGGTGGCCTGGCTTGTGCCAAGGAGGGCACCCGGTG...GTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS GCA 90 bp TCGGCCTTAGACTGGTTCCTGGCACGCGGGAAAGGAAGAGGCACTTaGCAATGCTGGGGCTCCCTGACATCAAAGAGTGCTAAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: SALDWFLARGKGRGT*QCWGSLTSKSAKRG
Trigger: CCCGCGCTTAGCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAACCAGTCTAAGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 90 bp AAGCCAGCTCAGCACGGTCCTAAGAGGCCACGTACAGCCCTGGTGTaGAGCAAGAGGTGGCTGGACCTCTCTTGGGGACAGTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: KPAQHGPKRPRTALV*SKRWLDLSWGQSSS
Trigger: TGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCCTCTTAGGACCGTGCTGAGCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS CCA 90 bp GTCCTAAGAGGCCACGTACAGCCCTGGTGTGCAGCAAGAGGTGGCTaGACCTCTCTTGGGGACAGTCCTCATCACCCGGACATGTTCCAG +
Preference number: 5 (lower is better)
Translates to: VLRGHVQPWCAARGG*TSLGDSPHHPDMFQ
Trigger: CTGGAACATGTCCGGGTGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCCTCTTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS CCA 90 bp CACGGTCCTAAGAGGCCACGTACAGCCCTGGTGTGCAGCAAGAGGTaGCTGGACCTCTCTTGGGGACAGTCCTCATCACCCGGACATGTT +
Preference number: 5 (lower is better)
Translates to: HGPKRPRTALVCSKR*LDLSWGQSSSPGHV
Trigger: AACATGTCCGGGTGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCCTCTTAGGACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS-3UTR CAA 90 bp CCCCAAACCTGGCCTGCAGCCATCCTGCCAACAACAGGAAGGTCAGCACAGGTCATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PQTWPAAILPTTGRSAQVIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...GACCTGTGCTGACCTTCCTGTTGTTGGCAGGATGGCTGCAGGCCAGGTTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp ATCCTGGGTCTGGCCTCCGAGGAGCTGGCGGCGGGCGCACCGTGTGCCCTGGCCTCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: ILGLASEELAAGAPCALASTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...GGCCAGGGCACACGGTGCGCCCGCCGCCAGCTCCTCGGAGGCCAGACCCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000400518.5
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: LGHGCPQGRFPPRSSSSGVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...GCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: CGAHGPPVQHLRSTLTISPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...TGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGATTGGAGATGCGCAGCTaGACTACCTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: ATCPALALHADHLTGAPGLEMRS*TTSSEH
Trigger: ATGCTCTGAGGAGGTAGTCAAGCTGCGCATCTCCAA...TCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: CIAEMPGGSDMGAHRVGFSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...GAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGATCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCGATGAGCCCCGTTTCTaGATACCTCCTGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GCPQGRFPPRSSSSGTRSDEPRF*IPPVCG
Trigger: CCCACACACAGGAGGTATCAAGAAACGGGGCTCATC...GCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp TCAGCCACCCACCCCTCACATCAGCCTAGCTATGTCTCCCACTGCCACACCCAGCTGTGGGGCAGCAACTaGAGATGCCCGACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: SATHPSHQPSYVSHCHTQLWGSN*RCPTLA
Trigger: GGCTAAAGTCGGGCATCTCAAGTTGCTGCCCCACAG...CTGGGTGTGGCAGTGGGAGACATAGCTAGGCTGATGTGAGGGGTGGGTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp CCGCTGTGGCCTGGTTACAGGATGGAGCACCCATTCTGGGTGGCGTGGCAGGTGTCCTCAGGATGCCCTTaGTTTATCCCTATCGAGCGC +
Preference number: 5 (lower is better)
Translates to: PLWPGYRMEHPFWVAWQVSSGCP*FIPIER
Trigger: GCGCTCGATAGGGATAAACAAAGGGCATCCTGAGGA...CACCTGCCACGCCACCCAGAATGGGTGCTCCATCCTGTAACCAGGCCACAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400519.6
CDS-3UTR CAA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCACGGTCCGCATCACTaGATCCCCAGAGCAAATCCT +
Preference number: 5 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPHGPHH*IPRANP
Trigger: AGGATTTGCTCTGGGGATCAAGTGATGCGGACCGTG...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS TCA 90 bp ACCAGATCCCCCGCCGACCACCAGGAGATCATAGTCCCGCTGACCTaGGCCAATCCAGATGGGTCCCAGCCTCTTCTTCTGTCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: TRSPADHQEIIVPLT*ANPDGSQPLLLSQY
Trigger: GTACTGAGACAGAAGAAGAGGCTGGGACCCATCTGGATTGGCTCAGGTCAGCGGGACTATGATCTCCTGGTGGTCGGCGGGGGATCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS GCA 90 bp GCCGTGCCACCCTCACATGCTCAAGCCTTCTCTCCAAACCCCTTCTaGACATTGCTGACCTCGGAGGGCTGCCCCATGACCAAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: AVPPSHAQAFSPNPF*TLLTSEGCPMTKLK
Trigger: TTTGAGCTTGGTCATGGGGCAGCCCTCCGAGGTCAGCAATGTGCAGAAGGGGTTTGGAGAGAAGGCTTGAGCATGTGAGGGTGGCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495655.2
CDS GCA 90 bp GGCCACAACTGGTTAACTCAGCGGGCGAATTCGAGCCCGCAGCAGTaGTGGCTGACTGTCTTCACTCAGCGCTGTAATCGGCACATCTGC +
Preference number: 5 (lower is better)
Translates to: GHNWLTQRANSSPQQ*WLTVFTQRCNRHIC
Trigger: GCAGATGTGCCGATTACAGCGCTGAGTGAAGACAGTCAGCCAGCACTGCTGCGGGCTCGAATTCGCCCGCTGAGTTAACCAGTTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS-3UTR CAA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACGTAACTTCGCCTGCGTaGGGGCCAAGGAAATGCAGG +
Preference number: 5 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHVTSPA*GPRKCR
Trigger: CCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTAC...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: GAHRVGFHPGRHHLAPGAPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...GGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: TCPALALHADHLTGAPGEPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000485358.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGCCACCTGTCCAGCACTaGCGCTCCACGCTGACCATC +
Preference number: 5 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQPPVQH*RSTLTI
Trigger: GATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGG...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS TCA 90 bp AGCCCAGCACCAGCACAGGCTCTAAGGGTCCAGTGCTCACTCTGGTaGACAAAAAGAGGACCCCACCAAGCACGCGCAGGCCTTACGTTT +
Preference number: 5 (lower is better)
Translates to: SPAPAQALRVQCSLW*TKRGPHQARAGLTF
Trigger: AAACGTAAGGCCTGCGCGTGCTTGGTGGGGTCCTCTTTTTGTTCACCAGAGTGAGCACTGGACCCTTAGAGCCTGTGCTGGTGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471835.1
CDS TCA 90 bp TGGCACGCGGGAAAGGAAGAGGCACTTGCCAATGCTGGGGCTCCCTaGCATCAAAGAGTGCTAAGCGCGGGACTCCAGAATCTTCCGCAT +
Preference number: 5 (lower is better)
Translates to: WHAGKEEALANAGAP*HQRVLSAGLQNLPH
Trigger: ATGCGGAAGATTCTGGAGTCCCGCGCTTAGCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 90 bp GTGTGCCCAGCCTTGGGGGTTCCAGCACCGTCCTCTGGGATGGGCTaGCAATCACCATGGCAGCAGGAAATGCAGATGTTGTTTGGCATT +
Preference number: 5 (lower is better)
Translates to: VCPALGVPAPSSGMG*QSPWQQEMQMLFGI
Trigger: AATGCCAAACAACATCTGCATTTCCTGCTGCCATGGTGATTGGCAGCCCATCCCAGAGGACGGTGCTGGAACCCCCAAGGCTGGGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS GCA 90 bp TTAGACTGGTTCCTGGCACGCGGGAAAGGAAGAGGCACTTGCCAATaGTGGGGCTCCCTGACATCAAAGAGTGCTAAGCGCGGGACTCCA +
Preference number: 5 (lower is better)
Translates to: LDWFLARGKGRGTCQ*WGSLTSKSAKRGTP
Trigger: TGGAGTCCCGCGCTTAGCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAACCAGTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS-3UTR CAA 90 bp ATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: IAEMPGGSDMGAHRVGFHISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...GTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: DMGAHRVGFHPGRHHLAPISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...TGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGCAGCGCCACCGCCATaGCCGCCATCGTCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QKKYPLYLHCRNARGLGHAAPPP*PPSSWG
Trigger: GCCCCACGACGATGGCGGCAATGGCGGTGGCGCTGC...ATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400521.7
ENST00000400525.6
CDS-3UTR CAA 90 bp GGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: GLGHGCPQGRFPPRSSSSPQSKS*SNFACV
Trigger: AACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGG...AGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGTCCAGGCCTGAGCGCTaGGAGATGCGCAGCTTGACT +
Preference number: 5 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQSRPER*EMRSLT
Trigger: AGTCAAGCTGCGCATCTCCAAGCGCTCAGGCCTGGA...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: CRNARGLGHGCPQGRFPPPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...GGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp CCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGAGCCTGGGGCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: PQGRFPPRSSSSGTRSLGPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...CCCCAGGCTCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS CCA 90 bp CACAACTGGTTAACTCAGCGGGCGAATTCGAGCCCGCAGCAGTGCTaGCTGACTGTCTTCACTCAGCGCTGTAATCGGCACATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HNWLTQRANSSPQQC*LTVFTQRCNRHICR
Trigger: TCTGCAGATGTGCCGATTACAGCGCTGAGTGAAGACAGTCAGCCAGCACTGCTGCGGGCTCGAATTCGCCCGCTGAGTTAACCAGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS-3UTR CAA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: SEKVPSLFALQKCQGARTGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: AGSECLMGTELSLEIMEKGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS GCA 90 bp CTGCACGTCACAGTCCATAACAAATTCCAAATCAGAATGTCGCTGTaGTGGAGATCCCTCCGTCCCAGGGTGTGCCCAGCCTTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: LHVTVHNKFQIRMSL*WRSLRPRVCPALGV
Trigger: AACCCCCAAGGCTGGGCACACCCTGGGACGGAGGGATCTCCAGCACAGCGACATTCTGATTTGGAATTTGTTATGGACTGTGACGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CCA 90 bp CACGTCACAGTCCATAACAAATTCCAAATCAGAATGTCGCTGTGCTaGAGATCCCTCCGTCCCAGGGTGTGCCCAGCCTTGGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: HVTVHNKFQIRMSLC*RSLRPRVCPALGVP
Trigger: TGGAACCCCCAAGGCTGGGCACACCCTGGGACGGAGGGATCTCCAGCACAGCGACATTCTGATTTGGAATTTGTTATGGACTGTGACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS-3UTR CAA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GSECLMGTELSLEIMEKFGMQPT*TQVPPR
Trigger: CCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCC...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp CAGTCCCCTGAGCCATCCCTGTGGGGCACACGGGCCACCTGTCCAGCACTTGCGTCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: QSPEPSLWGTRATCPALASTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...CGCAAGTGCTGGACAGGTGGCCCGTGTGCCCCACAGGGATGGCTCAGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: SLFALQKCQGARTWVPTGISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...CCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: AGSECLMGTELSLEIMEKVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp TTCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: FRKSTLFICIAEMPGGSDVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...GTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCATCATCTGGCACCAGGACCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: MGAHRVGFHPGRHHLAPGPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...TCCTGGTGCCAGATGATGACGACCTGGGTGGAAACCTACCCTGTGGGCACCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS CCA 90 bp AGCAGAACGAGAGCTGTCCTGAGGATCTGGCAGCGTGGAGGCCACTaGGGACCCCACATTTCAGCAGTGTGGATTCAAGAGAATTGGAAA +
Preference number: 5 (lower is better)
Translates to: SRTRAVLRIWQRGGH*GPHISAVWIQENWK
Trigger: TTTCCAATTCTCTTGAATCCACACTGCTGAAATGTGGGGTCCCCAGTGGCCTCCACGCTGCCAGATCCTCAGGACAGCTCTCGTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS-3UTR CAA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAGCTGGGCGGCCTCCTaGGCACAAGCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GSECLMGTELSLEIMEKFSWAAS*AQARPP
Trigger: TGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGCT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGGCCCCACCGGGTGCCTaGGGGAGAAGGTTCCACGTA +
Preference number: 5 (lower is better)
Translates to: AGSECLMGTELSLEIMEKAPPGA*GRRFHV
Trigger: TACGTGGAACCTTCTCCCCAAGGCACCCGGTGGGGC...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp CGGGCCACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCATCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: RATCPALALHADHLTGAPSTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...TGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp GTGAGCTATGATCACACCACCACACTCCTCCTAGGCAACAGAGAGAGACCCTGTATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: VSYDHTTTLLLGNRERPCISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...ACAGGGTCTCTCTCTGTTGCCTAGGAGGAGTGTGGTGGTGTGATCATAGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp ATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: ICIAEMPGGSDMGAHRVGPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...ACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS CCA 90 bp TTGGGGGTTCCAGCACCGTCCTCTGGGATGGGCTGCCAATCACCATaGCAGCAGGAAATGCAGATGTTGTTTGGCATTCCAGAAATGCAT +
Preference number: 5 (lower is better)
Translates to: LGVPAPSSGMGCQSP*QQEMQMLFGIPEMH
Trigger: ATGCATTTCTGGAATGCCAAACAACATCTGCATTTCCTGCTGCCATGGTGATTGGCAGCCCATCCCAGAGGACGGTGCTGGAACCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS-3UTR CAA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAAGCTGGGCGGCCTCCTaGGCACAAGCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: RKEMLAHATQMLTLTNAASWAAS*AQARPP
Trigger: TGGTGGCCTGGCTTGTGCCAAGGAGGCCGCCCAGCT...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CAA 90 bp AATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCAGGTCGTCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: NARGLGHGCPQGRFPPRSSTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...CGACCTGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CAA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAVPVSS*PVVLSS
Trigger: GGAGGACAGCACCACCGGCAAGGAGGACACGGGCAC...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS GCA 90 bp CATGGTGGCTCACTGCACATAGTGCCACTCTCAGCCTTTTTAGCCTaGAAAAGGTGTCATCGTGTCTACTCTGCAAGCTACTGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: HGGSLHIVPLSAFLA*KRCHRVYSASYWRG
Trigger: TCCTCGCCAGTAGCTTGCAGAGTAGACACGATGACACCTTTTGCAGGCTAAAAAGGCTGAGAGTGGCACTATGTGCAGTGAGCCACCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS CCA 90 bp TACATAACACTGGGATGCATCTCGTCCAGCCACCGTGAACTCCAGTaGTTTATAATGGGCGTGATAGACCTCAACATGCTCCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: YITLGCISSSHRELQ*FIMGVIDLNMLLPV
Trigger: CACGGGCAGGAGCATGTTGAGGTCTATCACGCCCATTATAAACCACTGGAGTTCACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634471.1
ENST00000634537.1
CDS-3UTR CAA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCAGCCCCACCGGGTGCCTaGGGGAGAAGGTTCCACGTA +
Preference number: 5 (lower is better)
Translates to: RKEMLAHATQMLTLTNAAAPPGA*GRRFHV
Trigger: TACGTGGAACCTTCTCCCCAAGGCACCCGGTGGGGC...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CAA 90 bp GCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGGGTAGGTTTCCACCCATCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: AEMPGGSDMGAHRVGFHPSTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...TGGGTGGAAACCTACCCTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TCAGAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACAGACCATGGAGGACATTaGCTGGTCGAAGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: SEKVPSLFALQKCQGARTDHGGH*LVEAAE
Trigger: CTCCGCGGCTTCGACCAGCAAATGTCCTCCATGGTC...TGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp ACCTGTCCAGCACTTGCGCTCCACGCTGACCATCTCACAGGCGCTCCAGGAGAGTTACTACCTAATTCTTaGCCTTTAATTGTCCCCATG +
Preference number: 5 (lower is better)
Translates to: TCPALALHADHLTGAPGELLPNS*PLIVPM
Trigger: CATGGGGACAATTAAAGGCAAAGAATTAGGTAGTAA...CTCTCCTGGAGCGCCTGTGAGATGGTCAGCGTGGAGCGCAAGTGCTGGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS TCA 90 bp TCACCTTCTGATTTCAGGGGTGTGGTAACACCAAGAGAACGGGCATaGCAAGGCTGGCAAAACAGTGGCTGGGAGCATAGTGCACAGAAA +
Preference number: 5 (lower is better)
Translates to: SPSDFRGVVTPRERA*QGWQNSGWEHSAQK
Trigger: TTTCTGTGCACTATGCTCCCAGCCACTGTTTTGCCAGCCTTGTCATGCCCGTTCTCTTGGTGTTACCACACCCCTGAAATCAGAAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS-3UTR CAA 90 bp GCAGGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AGSECLMGTELSLEIMEKIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...CTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACATCTCTTTCCCACCTTaGGCAACGCCGCAAACCGTG +
Preference number: 5 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYISFPP*ATPQTV
Trigger: CACGGTTTGCGGCGTTGCCAAAGGTGGGAAAGAGAT...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS-3UTR CAA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCGCCATAGCAGGGCCCTaGTTAGGTCATCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GSECLMGTELSLEIMEKFAIAGP*LGHPAL
Trigger: CAGGGCAGGATGACCTAACAAGGGCCCTGCTATGGC...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS GCA 90 bp AGGGACCCCAAAGCGTTCCATGTGCTCCTGACGTGCAGCTTGATCTaGACGTCACAGTCCATAACAAATTCCAAATCAGAATGTCGCTGT +
Preference number: 5 (lower is better)
Translates to: RDPKAFHVLLTCSLI*TSQSITNSKSECRC
Trigger: ACAGCGACATTCTGATTTGGAATTTGTTATGGACTGTGACGTGCAGATCAAGCTGCACGTCAGGAGCACATGGAACGCTTTGGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS GCA 90 bp GAAAGTGATGATAGTGAGTATAGGGGGAAAGGGTGTGCAAGCTGCTaGTGTGGGAAGCACGTGTGTAAAAACGTATCCCTCAAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: ESDDSEYRGKGCASC*CGKHVCKNVSLKEA
Trigger: GGCCTCTTTGAGGGATACGTTTTTACACACGTGCTTCCCACAGCAGCAGCTTGCACACCCTTTCCCCCTATACTCACTATCATCACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS GCA 90 bp CAGTGCTGGCTGACTGTCTTCACTCAGCGCTGTAATCGGCACATCTaGAGACAGGAAATCCTCCTCACTGAAGTTCCCAGTCTATTATCT +
Preference number: 5 (lower is better)
Translates to: QCWLTVFTQRCNRHI*RQEILLTEVPSLLS
Trigger: AGATAATAGACTGGGAACTTCAGTGAGGAGGATTTCCTGTCTGCAGATGTGCCGATTACAGCGCTGAGTGAAGACAGTCAGCCAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS-3UTR CAA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCATAGTTGGGGGCATCTaGGATCAGGCCTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GSECLMGTELSLEIMEKFIVGGI*DQASQQ
Trigger: CTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS GCA 90 bp GCAGAAAGTGATGATAGTGAGTATAGGGGGAAAGGGTGTGCAAGCTaGTGCTGTGGGAAGCACGTGTGTAAAAACGTATCCCTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: AESDDSEYRGKGCAS*CCGKHVCKNVSLKE
Trigger: CTCTTTGAGGGATACGTTTTTACACACGTGCTTCCCACAGCAGCAGCTTGCACACCCTTTCCCCCTATACTCACTATCATCACTTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS-3UTR CAA 90 bp GAAAAAGTACCCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGCCCTCTTTATTTGCATaGCAGAAATGCCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: EKVPSLFALQKCQGARTWPSLFA*QKCQGA
Trigger: AGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGG...CCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGGGTACTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000474308.5
ENST00000542719.6
CDS TCA 90 bp ACACCATCTTTACATAACACTGGGATGCATCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAATGGGCGTGATAGACCTCAACATGCT +
Preference number: 5 (lower is better)
Translates to: TPSLHNTGMHLVQPP*TPVVYNGRDRPQHA
Trigger: AGCATGTTGAGGTCTATCACGCCCATTATAAACCACTGGAGTTCACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTAAAGATGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634471.1
ENST00000634537.1
CDS-3UTR CAA 90 bp CCTCTTTATTTGCATTGCAGAAATGCCAGGGGGCTCGGACATGGGTGCCCACAGTCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: PLYLHCRNARGLGHGCPQSTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...CTGTGGGCACCCATGTCCGAGCCCCCTGGCATTTCTGCAATGCAAATAAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000542719.6
CDS-3UTR CAA 90 bp TGGACACACATACAACTCAGCCTTCAACAGGAAGGAAATGCTGGCACATGCTACAAACAACAAACTAGCTaGGCTGGGCACAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: WTHIQLSLQQEGNAGTCYKQQTS*AGHSSS
Trigger: TGAGCTACTGTGCCCAGCCAAGCTAGTTTGTTGTTT...GTAGCATGTGCCAGCATTTCCTTCCTGTTGAAGGCTGAGTTGTATGTGTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS TCA 90 bp CTGAAGGAAACAGAGAGGGGGCTGAAAGGTTATCTTCAGTGGCTTTaGCCTAGAGCGGTTGTGTTTAAACTGTTTCTCAGAATGTCCACT +
Preference number: 5 (lower is better)
Translates to: LKETERGLKGYLQWL*PRAVVFKLFLRMST
Trigger: AGTGGACATTCTGAGAAACAGTTTAAACACAACCGCTCTAGGTCAAAGCCACTGAAGATAACCTTTCAGCCCCCTCTCTGTTTCCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487165.5
ENST00000634471.1
CDS-3UTR CAA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCAAACAACAAACTAGCTaGGCTGGGCACAGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: GSECLMGTELSLEIMEKFKQQTS*AGHSSS
Trigger: TGAGCTACTGTGCCCAGCCAAGCTAGTTTGTTGTTT...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp GGGAGTGAGTGTTTAATGGGGACAGAGCTCAGTTTGGAGATAATGGAAAAGTTCTCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: GSECLMGTELSLEIMEKFSTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...GAACTTTTCCATTATCTCCAAACTGAGCTCTGTCCCCATTAAACACTCACTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS-3UTR CAA 90 bp AGGAAGGAAATGCTGGCACATGCTACACAAATGCTAACTCTAACAAATGCTGCATCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACT +
Preference number: 5 (lower is better)
Translates to: RKEMLAHATQMLTLTNAASTKLA*MLKYLT
Trigger: AGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGA...TGCAGCATTTGTTAGAGTTAGCATTTGTGTAGCATGTGCCAGCATTTCCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS GCA 72 bp GTGCCGCCCCACAGGCCTTCACGGTTGCTCTCGAGGTaGACTGGGGAGCGGCCAACCCGCCTGGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: VPPHRPSRLLSR*TGERPTRLAAS
Trigger: GCTGGCTGCCAGGCGGGTTGGCCGCTCCCCAGTGCACCTCGAGAGCAACCGTGAAGGCCTGTGGGGCGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS TCA 72 bp CGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: RRRAAAPGASRP*SLWVSAQAAPR
Trigger: CCGAGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485358.5
CDS CCA 72 bp TGCTCTCGAGGTGCACTGGGGAGCGGCCAACCCGCCTaGCAGCCAGCAGGATGGGGGAGCCCTATGGCCCAC +
Preference number: 6 (lower is better)
Translates to: CSRGALGSGQPA*QPAGWGSPMAH
Trigger: GTGGGCCATAGGGCTCCCCCATCCTGCTGGCTGCCAGGCGGGTTGGCCGCTCCCCAGTGCACCTCGAGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS CAA 72 bp GCCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGGCCCCACCGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: AWCISFLGMQPT*TQVPPRPHRVP
Trigger: GGGCACCCGGTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS CAA 90 bp AGCAGTGCCGCCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGGCCCCACCGGGTGCCCTCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: SSAAWCISFLGMQPT*TQVPPRPHRVPSLA
Trigger: TGCCAAGGAGGGCACCCGGTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS TCA 72 bp CGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCTCCA +
Preference number: 6 (lower is better)
Translates to: RRRAAAPGASRP*SLWVSAQAAPP
Trigger: TGGAGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000487165.5
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
CDS TCA 72 bp CCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGCCCCACCGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: PGASASWGCSPR*RRCRRGPTGCP
Trigger: AGGGCACCCGGTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS TCA 72 bp CGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: RRRAAAPGASRP*SLWVSAQAAPW
Trigger: CCAAGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495655.2
CDS CCA 72 bp TTGCCGGTGGTGCTGTCCTCCCAGGTGACCTGCAGCTaGCCATCAGGGAGCCTCCTGACCCGCGAGGGGGCA +
Preference number: 6 (lower is better)
Translates to: LPVVLSSQVTCS*PSGSLLTREGA
Trigger: TGCCCCCTCGCGGGTCAGGAGGCTCCCTGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCACCACCGGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000475995.3
ENST00000491939.6
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
ENST00000635155.1
CDS CCA 72 bp GCCCCACAGGCCTTCACGGTTGCTCTCGAGGTGCACTaGGGAGCGGCCAACCCGCCTGGCAGCCAGCAGGAT +
Preference number: 6 (lower is better)
Translates to: APQAFTVALEVH*GAANPPGSQQD
Trigger: ATCCTGCTGGCTGCCAGGCGGGTTGGCCGCTCCCCAGTGCACCTCGAGAGCAACCGTGAAGGCCTGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS CCA 72 bp CCGGGAATGGGCCACGGCAGCAGGGACGCTATGCTCTaGGGACACTCACGTGCGTGGGGTATCTCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: PGMGHGSRDAML*GHSRAWGISAA
Trigger: GGCGGCCGAGATACCCCACGCACGTGAGTGTCCCCAGAGCATAGCGTCCCTGCTGCCGTGGCCCATTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS CAA 72 bp GCCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTaGACGCAGGTGCCGCCGAGGCCCCACCGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: AWCISFLGMQPT*TQVPPRPHRVP
Trigger: AGGCACCCGGTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS TCA 72 bp CCTGGTGCATCAGCTTCTTGGGGATGCAGCCCACGTTaGCGCAGGTGCCGCCGAGGCCCCACCGGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: PGASASWGCSPR*RRCRRGPTGCL
Trigger: AAGGCACCCGGTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS TCA 72 bp CGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: RRRAAAPGASRP*SLWVSAQAAQH
Trigger: ATGCTGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462843.2
CDS TCA 72 bp CGCCGAAGAGCCGCTGCACCAGGAGCCTCCCGGCCATaGTCGCTATGGGTGTCAGCTCAGGCCGCCCCGTTT +
Preference number: 6 (lower is better)
Translates to: RRRAAAPGASRP*SLWVSAQAAPF
Trigger: AAACGGGGCGGCCTGAGCTGACACCCATAGCGATCATGGCCGGGAGGCTCCTGGTGCAGCGGCTCTTCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS CCA 72 bp CATGCGGCACGGGCTGGGCCACCTCCCAGCCATAGTTaGGGGCATCTTGGATCAGGCCTCCCAGCAGTGCCG +
Preference number: 6 (lower is better)
Translates to: HAARAGPPPSHS*GHLGSGLPAVP
Trigger: CGGCACTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTATGGCTGGGAGGTGGCCCAGCCCGTGCCGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS CAA 72 bp AGGCCTCCCAGCAGTGCCGCCTGGTGCATCAGCTTCTaGGGGATGCAGCCCACGTTGACGCAGGTGCCGCCG +
Preference number: 6 (lower is better)
Translates to: RPPSSAAWCISF*GMQPTLTQVPP
Trigger: CGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS CAA 90 bp TCTTGGATCAGGCCTCCCAGCAGTGCCGCCTGGTGCATCAGCTTCTaGGGGATGCAGCCCACGTTGACGCAGGTGCCGCCGAGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: SWIRPPSSAAWCISF*GMQPTLTQVPPRPH
Trigger: GTGGGGCCTCGGCGGCACCTGCGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTGATCCAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS GCA 72 bp AGAGGCCGGGAATGGGCCACGGCAGCAGGGACGCTATaGTCTGGGGACACTCACGTGCGTGGGGTATCTCGG +
Preference number: 6 (lower is better)
Translates to: RGREWATAAGTL*SGDTHVRGVSR
Trigger: CCGAGATACCCCACGCACGTGAGTGTCCCCAGAGCATAGCGTCCCTGCTGCCGTGGCCCATTCCCGGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS CCA 72 bp GTGTCAGCTCAGGCCGCCCCTCCACCACGTCACCAATaGCGTAGATGTGGGGCACAGAGGTGGCTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: VSAQAAPPPRHQ*RRCGAQRWLPG
Trigger: CCCGGGAAGCCACCTCTGTGCCCCACATCTACGCCATTGGTGACGTGGTGGAGGGGCGGCCTGAGCTGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000487165.5
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
CDS GCA 72 bp ACTCCAGAATCTTCCGCATGCCCAGGCCTCAGGCCCTaGTGCAGGGCCACCAGCACAGTGCCAGTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: TPESSACPGLRP*CRATSTVPVAL
Trigger: CAGAGCCACTGGCACTGTGCTGGTGGCCCTGCAGCAGGGCCTGAGGCCTGGGCATGCGGAAGATTCTGGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 72 bp CGGCAGCAGGGACGCTATGCTCTGGGGACACTCACGTaGGTGGGGTATCTCGGCCGCCCTCCAGTAGCAATG +
Preference number: 6 (lower is better)
Translates to: RQQGRYALGTLT*VGYLGRPPVAM
Trigger: CATTGCTACTGGAGGGCGGCCGAGATACCCCACGCACGTGAGTGTCCCCAGAGCATAGCGTCCCTGCTGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS CAA 90 bp GGTGCTATGGCCCACAGGACGGTGTCAAAGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCCCAGGTGACCTGCAGCTGGCCATCA +
Preference number: 6 (lower is better)
Translates to: GAMAHRTVSKVPVSS*PVVLSSQVTCSWPS
Trigger: TGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCACCACCGGCAAGGAGGACACGGGCACCTTTGACACCGTCCTGTGGGCCATAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334363.14
ENST00000491939.6
CDS CAA 90 bp CGACCTATGGCCCACAGGACGGTGTCAAAGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCCCAGGTGACCTGCAGCTGGCCATCA +
Preference number: 6 (lower is better)
Translates to: RPMAHRTVSKVPVSS*PVVLSSQVTCSWPS
Trigger: TGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCACCACCGGCAAGGAGGACACGGGCACCTTTGACACCGTCCTGTGGGCCATAGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
CDS CAA 90 bp AGCCCTATGGCCCACAGGACGGTGTCAAAGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCCCAGGTGACCTGCAGCTGGCCATCA +
Preference number: 6 (lower is better)
Translates to: SPMAHRTVSKVPVSS*PVVLSSQVTCSWPS
Trigger: TGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCACCACCGGCAAGGAGGACACGGGCACCTTTGACACCGTCCTGTGGGCCATAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS TCA 72 bp AGGTGCTGGGGATGGCAAGATGGGCACAGCCTAGTGTaGGTGCCGCCCCACAGGCCTTCACGGTTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: RCWGWQDGHSLV*VPPHRPSRLLS
Trigger: CGAGAGCAACCGTGAAGGCCTGTGGGGCGGCACTCACACTAGGCTGTGCCCATCTTGCCATCCCCAGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475995.3
CDS TCA 72 bp CCTCGGACAGCCCCACACAGCCATACTCCAGCGGGGTaGAGACGGTCGTGGGAACCTCCACCACGTCACCAA +
Preference number: 6 (lower is better)
Translates to: PRTAPHSHTPAG*RRSWEPPPRHQ
Trigger: TTGGTGACGTGGTGGAGGTTCCCACGACCGTCTTCACCCCGCTGGAGTATGGCTGTGTGGGGCTGTCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634471.1
CDS GCA 72 bp TGGGAGGCGTTTGCTCAGGATGCCCCAGCCTGGCCCTaGTCCCCTAGACAGCCAGGGATTCAGGCCACAACT +
Preference number: 6 (lower is better)
Translates to: WEAFAQDAPAWP*SPRQPGIQATT
Trigger: AGTTGTGGCCTGAATCCCTGGCTGTCTAGGGGAGCAGGGCCAGGCTGGGGCATCCTGAGCAAACGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS CCA 72 bp GGGGCATCTTGGATCAGGCCTCCCAGCAGTGCCGCCTaGTGCATCAGCTTCTTGGGGATGCAGCCCACGTTG +
Preference number: 6 (lower is better)
Translates to: GASWIRPPSSAA*CISFLGMQPTL
Trigger: CAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTGATCCAAGATGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS CCA 72 bp GGCCACGTACAGCCCTGGTGTGCAGCAAGAGGTGGCTaGACCTCTCTTGGGGACAGTCCTCATCACCCGGAC +
Preference number: 6 (lower is better)
Translates to: GHVQPWCAARGG*TSLGDSPHHPD
Trigger: GTCCGGGTGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS CAA 90 bp ACACCTATGGCCCACAGGACGGTGTCAAAGGTGCCCGTGTCCTCCTaGCCGGTGGTGCTGTCCTCCCAGGTGACCTGCAGCTGGCCATCA +
Preference number: 6 (lower is better)
Translates to: TPMAHRTVSKVPVSS*PVVLSSQVTCSWPS
Trigger: TGATGGCCAGCTGCAGGTCACCTGGGAGGACAGCACCACCGGCAAGGAGGACACGGGCACCTTTGACACCGTCCTGTGGGCCATAGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS TCA 72 bp AGGTGGCAGGCAGGTCTGAAACGGACACTGGTCAGATaGCAGCCGGCACAGGAGACAAGGCAGGGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: RWQAGLKRTLVR*QPAQETRQGCH
Trigger: GTGGCACCCCTGCCTTGTCTCCTGTGCCGGCTGTCATCTGACCAGTGTCCGTTTCAGACCTGCCTGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 72 bp GCATCTTGGATCAGGCCTCCCAGCAGTGCCGCCTGGTaGATCAGCTTCTTGGGGATGCAGCCCACGTTGACG +
Preference number: 6 (lower is better)
Translates to: ASWIRPPSSAAW*ISFLGMQPTLT
Trigger: CGTCAACGTGGGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTGATCCAAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS GCA 72 bp CAGCACGGTCCTAAGAGGCCACGTACAGCCCTGGTGTaGAGCAAGAGGTGGCTGGACCTCTCTTGGGGACAG +
Preference number: 6 (lower is better)
Translates to: QHGPKRPRTALV*SKRWLDLSWGQ
Trigger: CTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCCTCTTAGGACCGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS CCA 72 bp GGGTGCCACCGGTGGAAACTGGAGTCGGCCTTAGACTaGTTCCTGGCACGCGGGAAAGGAAGAGGCACTTGC +
Preference number: 6 (lower is better)
Translates to: GCHRWKLESALD*FLARGKGRGTC
Trigger: GCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAACCAGTCTAAGGCCGACTCCAGTTTCCACCGGTGGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS CAA 90 bp CTTCCATGGCAGGTGCCTGTCCTTCTTGTTGCCATAGCAGGGCCCTaGTTAGGTCATCCTGCCCTGCAGCCTCGCACTGTGCCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: LPWQVPVLLVAIAGP*LGHPALQPRTVPPL
Trigger: CAGAGGGGGCACAGTGCGAGGCTGCAGGGCAGGATGACCTAACAAGGGCCCTGCTATGGCAACAAGAAGGACAGGCACCTGCCATGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS TCA 72 bp CGCGAGGGGGCACAGCCCCTCAGGAACCGGGTGCCATaGGATGCCATGTGCTCTATGACCATGGAGGACATT +
Preference number: 6 (lower is better)
Translates to: REGAQPLRNRVP*DAMCSMTMEDI
Trigger: AATGTCCTCCATGGTCATAGAGCACATGGCATCTCATGGCACCCGGTTCCTGAGGGGCTGTGCCCCCTCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000475995.3
ENST00000491939.6
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
ENST00000635155.1
CDS TCA 72 bp GACGGTCGTGGGAACATTGTCGTAGTCCATCAGATCTaGGGACCCGCCGAAGAGCCGCTGCACCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: DGRGNIVVVHQI*GPAEEPLHQEP
Trigger: AGGCTCCTGGTGCAGCGGCTCTTCGGCGGGTCCTCAGATCTGATGGACTACGACAATGTTCCCACGACCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634537.1
CDS TCA 72 bp CCCGCCGACCACCAGGAGATCATAGTCCCGCTGACCTaGGCCAATCCAGATGGGTCCCAGCCTCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: PADHQEIIVPLT*ANPDGSQPLLL
Trigger: CAGAAGAAGAGGCTGGGACCCATCTGGATTGGCTCAGGTCAGCGGGACTATGATCTCCTGGTGGTCGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS GCA 72 bp ATAGTTGGGGGCATCTTGGATCAGGCCTCCCAGCAGTaGCGCCTGGTGCATCAGCTTCTTGGGGATGCAGCC +
Preference number: 6 (lower is better)
Translates to: IVGGILDQASQQ*RLVHQLLGDAA
Trigger: GGCTGCATCCCCAAGAAGCTGATGCACCAGGCGGCACTGCTGGGAGGCCTGATCCAAGATGCCCCCAACTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS GCA 72 bp CGTCAGCACCATGTCCGGGGTTATATGCAGCCCCTATaGCATCACCCTTTGCCCTCCGAGTGGGCATCTCCC +
Preference number: 6 (lower is better)
Translates to: RQHHVRGYMQPL*HHPLPSEWASP
Trigger: GGGAGATGCCCACTCGGAGGGCAAAGGGTGATGGCATAGGGGCTGCATATAACCCCGGACATGGTGCTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495655.2
CDS CCA 72 bp GCCCTGGTGTGCAGCAAGAGGTGGCTGGACCTCTCTTaGGGACAGTCCTCATCACCCGGACATGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: ALVCSKRWLDLS*GQSSSPGHVPA
Trigger: TGCTGGAACATGTCCGGGTGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS CCA 72 bp AAGAGGCCACGTACAGCCCTGGTGTGCAGCAAGAGGTaGCTGGACCTCTCTTGGGGACAGTCCTCATCACCC +
Preference number: 6 (lower is better)
Translates to: KRPRTALVCSKR*LDLSWGQSSSP
Trigger: GGGTGATGAGGACTGTCCCCAAGAGAGGTCCAGCCACCTCTTGCTGCACACCAGGGCTGTACGTGGCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5
CDS TCA 72 bp CCAGCACAGGCTCTAAGGGTCCAGTGCTCACTCTGGTaGACAAAAAGAGGACCCCACCAAGCACGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: PAQALRVQCSLW*TKRGPHQARAG
Trigger: GCCTGCGCGTGCTTGGTGGGGTCCTCTTTTTGTTCACCAGAGTGAGCACTGGACCCTTAGAGCCTGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471835.1
CDS TCA 72 bp CTCAGCGGGCGAATTCGAGCCCGCAGCAGTGCTGGCTaGCTGTCTTCACTCAGCGCTGTAATCGGCACATCT +
Preference number: 6 (lower is better)
Translates to: LSGRIRARSSAG*LSSLSAVIGTS
Trigger: AGATGTGCCGATTACAGCGCTGAGTGAAGACAGTCAGCCAGCACTGCTGCGGGCTCGAATTCGCCCGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS GCA 72 bp GGGGGCACAGCCCCTCAGGAACCGGGTGCCATGAGATaGCATGTGCTCTATGACCATGGAGGACATTTGCTG +
Preference number: 6 (lower is better)
Translates to: GGTAPQEPGAMR*HVLYDHGGHLL
Trigger: CAGCAAATGTCCTCCATGGTCATAGAGCACATGGCATCTCATGGCACCCGGTTCCTGAGGGGCTGTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000475995.3
ENST00000491939.6
ENST00000494454.5
ENST00000542719.6
ENST00000634537.1
ENST00000635155.1
CDS GCA 72 bp GCCTTGGGGGTTCCAGCACCGTCCTCTGGGATGGGCTaGCAATCACCATGGCAGCAGGAAATGCAGATGTTG +
Preference number: 6 (lower is better)
Translates to: ALGVPAPSSGMG*QSPWQQEMQML
Trigger: CAACATCTGCATTTCCTGCTGCCATGGTGATTGGCAGCCCATCCCAGAGGACGGTGCTGGAACCCCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS GCA 72 bp CCCTCACATGCTCAAGCCTTCTCTCCAAACCCCTTCTaGACATTGCTGACCTCGGAGGGCTGCCCCATGACC +
Preference number: 6 (lower is better)
Translates to: PSHAQAFSPNPF*TLLTSEGCPMT
Trigger: GGTCATGGGGCAGCCCTCCGAGGTCAGCAATGTGCAGAAGGGGTTTGGAGAGAAGGCTTGAGCATGTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495655.2
CDS CCA 72 bp CCACGTCACCAATGGCGTAGATGTGGGGCACAGAGGTaGCTTCCCGGGAGTCCACCAGGATCTTCTGAGTGT +
Preference number: 6 (lower is better)
Translates to: PRHQWRRCGAQR*LPGSPPGSSEC
Trigger: ACACTCAGAAGATCCTGGTGGACTCCCGGGAAGCCACCTCTGTGCCCCACATCTACGCCATTGGTGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000487165.5
ENST00000494454.5
ENST00000542719.6
ENST00000634471.1
ENST00000634537.1
CDS CAA 72 bp CAGGTGCCTGTCCTTCTTGTTGCCATAGCAGGGCCCTaGTTAGGTCATCCTGCCCTGCAGCCTCGCACTGTG +
Preference number: 6 (lower is better)
Translates to: QVPVLLVAIAGP*LGHPALQPRTV
Trigger: CACAGTGCGAGGCTGCAGGGCAGGATGACCTAACAAGGGCCCTGCTATGGCAACAAGAAGGACAGGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491939.6
CDS GCA 72 bp TTCCTGGCACGCGGGAAAGGAAGAGGCACTTGCCAATaGTGGGGCTCCCTGACATCAAAGAGTGCTAAGCGC +
Preference number: 6 (lower is better)
Translates to: FLARGKGRGTCQ*WGSLTSKSAKR
Trigger: GCGCTTAGCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 72 bp GACTGGTTCCTGGCACGCGGGAAAGGAAGAGGCACTTaGCAATGCTGGGGCTCCCTGACATCAAAGAGTGCT +
Preference number: 6 (lower is better)
Translates to: DWFLARGKGRGT*QCWGSLTSKSA
Trigger: AGCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAACCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 72 bp TGGTTAACTCAGCGGGCGAATTCGAGCCCGCAGCAGTaGTGGCTGACTGTCTTCACTCAGCGCTGTAATCGG +
Preference number: 6 (lower is better)
Translates to: WLTQRANSSPQQ*WLTVFTQRCNR
Trigger: CCGATTACAGCGCTGAGTGAAGACAGTCAGCCAGCACTGCTGCGGGCTCGAATTCGCCCGCTGAGTTAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS CCA 72 bp TTAACTCAGCGGGCGAATTCGAGCCCGCAGCAGTGCTaGCTGACTGTCTTCACTCAGCGCTGTAATCGGCAC +
Preference number: 6 (lower is better)
Translates to: LTQRANSSPQQC*LTVFTQRCNRH
Trigger: GTGCCGATTACAGCGCTGAGTGAAGACAGTCAGCCAGCACTGCTGCGGGCTCGAATTCGCCCGCTGAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS CAA 72 bp AGACTGGTTCCTGGCACGCGGGAAAGGAAGAGGCACTaGCCAATGCTGGGGCTCCCTGACATCAAAGAGTGC +
Preference number: 6 (lower is better)
Translates to: RLVPGTRERKRH*PMLGLPDIKEC
Trigger: GCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCCCGCGTGCCAGGAACCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS TCA 72 bp CGGCCGCCCTCCAGTAGCAATGATGATGTGATCGGCTaGCAGCAGAATCTCTTTCCCACCTTTGGCAACGCC +
Preference number: 6 (lower is better)
Translates to: RPPSSSNDDVIG*QQNLFPTFGNA
Trigger: GGCGTTGCCAAAGGTGGGAAAGAGATTCTGCTGTCAGCCGATCACATCATCATTGCTACTGGAGGGCGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000471835.1
ENST00000474308.5
ENST00000475995.3
ENST00000484672.5
ENST00000491939.6
ENST00000494454.5
ENST00000496729.2
ENST00000542719.6
ENST00000635155.1
CDS GCA 72 bp CTTGATCCCCAGAGCAAATCCTTGAGTAACTTCGCCTaGGTTGGGGCCAAGGAAATGCAGGCCCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: LDPQSKSLSNFA*VGAKEMQAQHQ
Trigger: CTGGTGCTGGGCCTGCATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGGATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634471.1
ENST00000634537.1
CDS TCA 72 bp CACGGTCCGCATCACTTGATCCCCAGAGCAAATCCTTaGGTAACTTCGCCTGCGTTGGGGCCAAGGAAATGC +
Preference number: 6 (lower is better)
Translates to: HGPHHLIPRANP*VTSPALGPRKC
Trigger: GCATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGGATCAAGTGATGCGGACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS TCA 72 bp GGAAAGGAAGAGGCACTTGCCAATGCTGGGGCTCCCTaGCATCAAAGAGTGCTAAGCGCGGGACTCCAGAAT +
Preference number: 6 (lower is better)
Translates to: GKEEALANAGAP*HQRVLSAGLQN
Trigger: ATTCTGGAGTCCCGCGCTTAGCACTCTTTGATGTCAGGGAGCCCCAGCATTGGCAAGTGCCTCTTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487165.5
CDS GCA 72 bp AGATGGGTCCCAGCCTCTTCTTCTGTCTCAGTACAATaGTTGTCTACCTCCACAGTAGGCAGCAGGGCGGTC +
Preference number: 6 (lower is better)
Translates to: RWVPASSSVSVQ*LSTSTVGSRAV
Trigger: GACCGCCCTGCTGCCTACTGTGGAGGTAGACAAGCATTGTACTGAGACAGAAGAAGAGGCTGGGACCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS CCA 72 bp CCAGCACCGTCCTCTGGGATGGGCTGCCAATCACCATaGCAGCAGGAAATGCAGATGTTGTTTGGCATTCCA +
Preference number: 6 (lower is better)
Translates to: PAPSSGMGCQSP*QQEMQMLFGIP
Trigger: TGGAATGCCAAACAACATCTGCATTTCCTGCTGCCATGGTGATTGGCAGCCCATCCCAGAGGACGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CAA 72 bp CCACGGTCCGCATCACTTGATCCCCAGAGCAAATCCTaGAGTAACTTCGCCTGCGTTGGGGCCAAGGAAATG +
Preference number: 6 (lower is better)
Translates to: PRSASLDPQSKS*SNFACVGAKEM
Trigger: CATTTCCTTGGCCCCAACGCAGGCGAAGTTACTCAAGGATTTGCTCTGGGGATCAAGTGATGCGGACCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474308.5
CDS CAA 72 bp TGGGTCCCAGCCTCTTCTTCTGTCTCAGTACAATGCTaGTCTACCTCCACAGTAGGCAGCAGGGCGGTCGAT +
Preference number: 6 (lower is better)
Translates to: WVPASSSVSVQC*STSTVGSRAVD
Trigger: ATCGACCGCCCTGCTGCCTACTGTGGAGGTAGACAAGCATTGTACTGAGACAGAAGAAGAGGCTGGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS TCA 72 bp GGGTATCTCGGCCGCCCTCCAGTAGCAATGATGATGTaGTCGGCTGACAGCAGAATCTCTTTCCCACCTTTG +
Preference number: 6 (lower is better)
Translates to: GYLGRPPVAMMM*SADSRISFPPL
Trigger: CAAAGGTGGGAAAGAGATTCTGCTGTCAGCCGATCACATCATCATTGCTACTGGAGGGCGGCCGAGATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000471835.1
ENST00000474308.5
ENST00000475995.3
ENST00000484672.5
ENST00000491939.6
ENST00000494454.5
ENST00000496729.2
ENST00000542719.6
ENST00000635155.1
CDS GCA 72 bp CCAGTTCAAGGATTTCACGTGATTTTGAACAGCTTCTaGCATCTTCCTCCAGTCATGCGGCACGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PVQGFHVILNSF*HLPPVMRHGLG
Trigger: GCCCAGCCCGTGCCGCATGACTGGAGGAAGATGGCAGAAGCTGTTCAAAATCACGTGAAATCCTTGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000474308.5
ENST00000491939.6
ENST00000496729.2
ENST00000542719.6
CDS GCA 72 bp ACAGTCCATAACAAATTCCAAATCAGAATGTCGCTGTaGTGGAGATCCCTCCGTCCCAGGGTGTGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: TVHNKFQIRMSL*WRSLRPRVCPA
Trigger: GGCTGGGCACACCCTGGGACGGAGGGATCTCCAGCACAGCGACATTCTGATTTGGAATTTGTTATGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CCA 72 bp GTCCATAACAAATTCCAAATCAGAATGTCGCTGTGCTaGAGATCCCTCCGTCCCAGGGTGTGCCCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: VHNKFQIRMSLC*RSLRPRVCPAL
Trigger: CAAGGCTGGGCACACCCTGGGACGGAGGGATCTCCAGCACAGCGACATTCTGATTTGGAATTTGTTATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CAA 90 bp CAATCCAGATGGGTCCCAGCCTCTTCTTCTGTCTCAGTACAATGCTaGTCTACCTCCACAGTAGGCAGCAGGGCGGTCGATCTCTGTAGT +
Preference number: 6 (lower is better)
Translates to: QSRWVPASSSVSVQC*STSTVGSRAVDLCS
Trigger: ACTACAGAGATCGACCGCCCTGCTGCCTACTGTGGAGGTAGACAAGCATTGTACTGAGACAGAAGAAGAGGCTGGGACCCATCTGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS GCA 72 bp GATAGTGAGTATAGGGGGAAAGGGTGTGCAAGCTGCTaGTGTGGGAAGCACGTGTGTAAAAACGTATCCCTC +
Preference number: 6 (lower is better)
Translates to: DSEYRGKGCASC*CGKHVCKNVSL
Trigger: GAGGGATACGTTTTTACACACGTGCTTCCCACAGCAGCAGCTTGCACACCCTTTCCCCCTATACTCACTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496729.2
CDS GCA 72 bp CTGACTGTCTTCACTCAGCGCTGTAATCGGCACATCTaGAGACAGGAAATCCTCCTCACTGAAGTTCCCAGT +
Preference number: 6 (lower is better)
Translates to: LTVFTQRCNRHI*RQEILLTEVPS
Trigger: ACTGGGAACTTCAGTGAGGAGGATTTCCTGTCTGCAGATGTGCCGATTACAGCGCTGAGTGAAGACAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635155.1
CDS TCA 72 bp CAGGGGATTCCTTCAGCCAGAAGATGTCATCACTTGTaGTTCCATATTCCAAGGCACCTTCGATGTGCGTGG +
Preference number: 6 (lower is better)
Translates to: QGIPSARRCHHL*FHIPRHLRCAW
Trigger: CCACGCACATCGAAGGTGCCTTGGAATATGGAATCACAAGTGATGACATCTTCTGGCTGAAGGAATCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000334363.14
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000471835.1
ENST00000474308.5
ENST00000475995.3
ENST00000484672.5
ENST00000491939.6
ENST00000494454.5
ENST00000542719.6
ENST00000635155.1
CDS GCA 72 bp AAAAGGGACCCCAAAGCGTTCCATGTGCTCCTGACGTaGAGCTTGATCTGCACGTCACAGTCCATAACAAAT +
Preference number: 6 (lower is better)
Translates to: KRDPKAFHVLLT*SLICTSQSITN
Trigger: ATTTGTTATGGACTGTGACGTGCAGATCAAGCTGCACGTCAGGAGCACATGGAACGCTTTGGGGTCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CAA 72 bp GACCCCAAAGCGTTCCATGTGCTCCTGACGTGCAGCTaGATCTGCACGTCACAGTCCATAACAAATTCCAAA +
Preference number: 6 (lower is better)
Translates to: DPKAFHVLLTCS*ICTSQSITNSK
Trigger: TTTGGAATTTGTTATGGACTGTGACGTGCAGATCAAGCTGCACGTCAGGAGCACATGGAACGCTTTGGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS TCA 72 bp TTACATAACACTGGGATGCATCTCGTCCAGCCACCGTaGACTCCAGTGGTTTATAATGGGCGTGATAGACCT +
Preference number: 6 (lower is better)
Translates to: LHNTGMHLVQPP*TPVVYNGRDRP
Trigger: AGGTCTATCACGCCCATTATAAACCACTGGAGTTCACGGTGGCTGGACGAGATGCATCCCAGTGTTATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400518.5
ENST00000400519.6
ENST00000400521.7
ENST00000400525.6
ENST00000462330.5
ENST00000462843.2
ENST00000474308.5
ENST00000485358.5
ENST00000487165.5
ENST00000494454.5
ENST00000495655.2
ENST00000542719.6
ENST00000634471.1
ENST00000634537.1
CDS GCA 72 bp TCACTGCACATAGTGCCACTCTCAGCCTTTTTAGCCTaGAAAAGGTGTCATCGTGTCTACTCTGCAAGCTAC +
Preference number: 6 (lower is better)
Translates to: SLHIVPLSAFLA*KRCHRVYSASY
Trigger: GTAGCTTGCAGAGTAGACACGATGACACCTTTTGCAGGCTAAAAAGGCTGAGAGTGGCACTATGTGCAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400518.5
CDS CAA 90 bp GGATGGGCTGCCAATCACCATGGCAGCAGGAAATGCAGATGTTGTTaGGCATTCCAGAAATGCATAGAGATCCGTGGAGATAAACTCAGA +
Preference number: 6 (lower is better)
Translates to: GWAANHHGSRKCRCC*AFQKCIEIRGDKLR
Trigger: TCTGAGTTTATCTCCACGGATCTCTATGCATTTCTGGAATGCCAAACAACATCTGCATTTCCTGCTGCCATGGTGATTGGCAGCCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462330.5
CDS CAA 90 bp CTAAAAAGGGACCCCAAAGCGTTCCATGTGCTCCTGACGTGCAGCTaGATCTGCACGTCACAGTCCATAACAAATTCCAAATCAGAATGT +
Preference number: 6 (lower is better)
Translates to: LKRDPKAFHVLLTCS*ICTSQSITNSKSEC
Trigger: ACATTCTGATTTGGAATTTGTTATGGACTGTGACGTGCAGATCAAGCTGCACGTCAGGAGCACATGGAACGCTTTGGGGTCCCTTTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CAA 72 bp GCCAATCACCATGGCAGCAGGAAATGCAGATGTTGTTaGGCATTCCAGAAATGCATAGAGATCCGTGGAGAT +
Preference number: 6 (lower is better)
Translates to: ANHHGSRKCRCC*AFQKCIEIRGD
Trigger: ATCTCCACGGATCTCTATGCATTTCTGGAATGCCAAACAACATCTGCATTTCCTGCTGCCATGGTGATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS GCA 72 bp AAAGCGTTCCATGTGCTCCTGACGTGCAGCTTGATCTaGACGTCACAGTCCATAACAAATTCCAAATCAGAA +
Preference number: 6 (lower is better)
Translates to: KAFHVLLTCSLI*TSQSITNSKSE
Trigger: TTCTGATTTGGAATTTGTTATGGACTGTGACGTGCAGATCAAGCTGCACGTCAGGAGCACATGGAACGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462330.5
ENST00000495655.2
CDS CAA 90 bp GTCGATCTCTGTAGTACCATTCCTCTAAATTTACTACCTAATTCTTaGCCTTTAATTGTCCCCATGGGGGTCACTGGCCCTTTACCTCAA +
Preference number: 6 (lower is better)
Translates to: VDLCSTIPLNLLPNS*PLIVPMGVTGPLPQ
Trigger: TTGAGGTAAAGGGCCAGTGACCCCCATGGGGACAATTAAAGGCAAAGAATTAGGTAGTAAATTTAGAGGAATGGTACTACAGAGATCGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS CAA 72 bp TGTAGTACCATTCCTCTAAATTTACTACCTAATTCTTaGCCTTTAATTGTCCCCATGGGGGTCACTGGCCCT +
Preference number: 6 (lower is better)
Translates to: CSTIPLNLLPNS*PLIVPMGVTGP
Trigger: AGGGCCAGTGACCCCCATGGGGACAATTAAAGGCAAAGAATTAGGTAGTAAATTTAGAGGAATGGTACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542719.6
CDS CAA 90 bp CCTTTGGCAACGCCGCAAACCGTGTGCTCGTCAACAAAGCTGGCTTaGATGTTAAAGTACTTGACTTTTCTGAAAGATAAAGATAAGATT +
Preference number: 6 (lower is better)
Translates to: PLATPQTVCSSTKLA*MLKYLTFLKDKDKI
Trigger: AATCTTATCTTTATCTTTCAGAAAAGTCAAGTACTTTAACATCAAAGCCAGCTTTGTTGACGAGCACACGGTTTGCGGCGTTGCCAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494454.5