RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TXNL4A (Homo sapiens)

Ensembl gene IDs: ENSG00000141759

Ensembl transcript IDs: ENST00000269601.10, ENST00000355491.5, ENST00000585474.5, ENST00000585769.5, ENST00000586295.1, ENST00000586825.1, ENST00000588162.1, ENST00000589926.1, ENST00000591711.5, ENST00000592837.1, ENST00000592957.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGGTACCCTGCCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCTaGGGTCAGAGGGCCCACGGTGTGCTCAAGTGCCCCCATCCCTGC +
Preference number: 1 (lower is better)
Translates to: EGTLPKVTWWGRAWV*GQRAHGVLKCPHPC
Trigger: GCAGGGATGGGGGCACTTGAGCACACCGTGGGCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGGGTACCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 90 bp CCGTTTCCACAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTaGACCACTCCTGTGCCCGGCAGGCACCACGTGCTTCTGCGTCCA +
Preference number: 1 (lower is better)
Translates to: PFPQQQSISRQQRAL*TTPVPGRHHVLLRP
Trigger: TGGACGCAGAAGCACGTGGTGCCTGCCGGGCACAGGAGTGGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTGTGGAAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR TCA 90 bp CAGGTGAAGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTaGAAATACCACCAGCAGCCCCCAGAAGCCAGGGACAGGCCTGAG +
Preference number: 1 (lower is better)
Translates to: QVKAEMGRSIHTPRN*KYHQQPPEARDRPE
Trigger: CTCAGGCCTGTCCCTGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCTTCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
3UTR TCA 90 bp CCCATCCCTGCCCTTCCTCACTTTCACTTCAGAGCTCGAGTGTGCTaGGACGGGACACGAAGATCCCAACCAACCATCCACACTGCTAGG +
Preference number: 1 (lower is better)
Translates to: PIPALPHFHFRARVC*DGTRRSQPTIHTAR
Trigger: CCTAGCAGTGTGGATGGTTGGTTGGGATCTTCGTGTCCCGTCTCAGCACACTCGAGCTCTGAAGTGAAAGTGAGGAAGGGCAGGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 90 bp TATCCGCCTTTACCAAGGAGGAAACAAAGCTCAGAGAAGGTACCCTaGCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCTGAGGTCAGA +
Preference number: 1 (lower is better)
Translates to: YPPLPRRKQSSEKVP*PRSLGGAEPGSEVR
Trigger: TCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGGGTACCTTCTCTGAGCTTTGTTTCCTCCTTGGTAAAGGCGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 90 bp TCCTGTGCCCGGCAGGCACCACGTGCTTCTGCGTCCACATCTGTGTaGAGGGCAGACACTATTATCCGCCTTTACCAAGGAGGAAACAAA +
Preference number: 1 (lower is better)
Translates to: SCARQAPRASASTSV*RADTIIRLYQGGNK
Trigger: TTTGTTTCCTCCTTGGTAAAGGCGGATAATAGTGTCTGCCCTGCACACAGATGTGGACGCAGAAGCACGTGGTGCCTGCCGGGCACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR TCA 90 bp TGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCATCAATGGTTaGGCGTCATCCTCTTGGTGCTGTCCTCGGGGTAGTGAGCTGAGG +
Preference number: 1 (lower is better)
Translates to: WWEATGSWDEFLING*ASSSWCCPRGSELR
Trigger: CCTCAGCTCACTACCCCGAGGACAGCACCAAGAGGATGACGCTCAACCATTGATGAGAAATTCATCCCATGATCCAGTCGCCTCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586295.1
3UTR GCA 90 bp TTTGCACCTTCCTTAACAAGCAGTGATGCTGAGTGTCTCTTCGTGTaGTTCCTGGCCGTCTGTTTCACCTGCTCTGGAGAAATAGCAGGA +
Preference number: 1 (lower is better)
Translates to: FAPSLTSSDAECLFV*FLAVCFTCSGEIAG
Trigger: TCCTGCTATTTCTCCAGAGCAGGTGAAACAGACGGCCAGGAAGCACACGAAGAGACACTCAGCATCACTGCTTGTTAAGGAAGGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CCA 90 bp CTTGTTGCGATCTTTTTGTATCTAGCCGAACTTGTAGGTGTGAAGTaGCGTCTCACTGTGGTTTTGATTTGCACCTTCCTTAACAAGCAG +
Preference number: 1 (lower is better)
Translates to: LVAIFLYLAELVGVK*RLTVVLICTFLNKQ
Trigger: CTGCTTGTTAAGGAAGGTGCAAATCAAAACCACAGTGAGACGCCACTTCACACCTACAAGTTCGGCTAGATACAAAAAGATCGCAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CCA 90 bp ATCATGATGTGCTTGTTCCGAGTAGGAGGCTCCACTTTTGGAGAATaGTCTAATGCTCATGTAGCTAATTCACCAACCTCTATGGTAACT +
Preference number: 1 (lower is better)
Translates to: IMMCLFRVGGSTFGE*SNAHVANSPTSMVT
Trigger: AGTTACCATAGAGGTTGGTGAATTAGCTACATGAGCATTAGACCATTCTCCAAAAGTGGAGCCTCCTACTCGGAACAAGCACATCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585769.5
3UTR CCA 90 bp TATGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTaGGTTTCCACATTTTGGCTTCTGTGTACGAGTTTCTATGTGGAC +
Preference number: 1 (lower is better)
Translates to: YGWTFCLTVHLLMDT*VSTFWLLCTSFYVD
Trigger: GTCCACATAGAAACTCGTACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CCA 90 bp CAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: QAAAFAGPAVHRLDDVHHLSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...ATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
3UTR CAA 90 bp CAAGGAGGAAACAAAGCTCAGAGAAGGTACCCTGCCCAAGGTCACTaGGTGGGGCAGAGCCTGGGTCTGAGGTCAGAGGGCCCACGGTGT +
Preference number: 2 (lower is better)
Translates to: QGGNKAQRRYPAQGH*VGQSLGLRSEGPRC
Trigger: ACACCGTGGGCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGGGTACCTTCTCTGAGCTTTGTTTCCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR TCA 90 bp CTCCCGTTTCCACAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTGCACCGAACACCTGACTTCGTaGTCTGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LPFPQQQSISRQQRALCTEHLTS*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACGAAGTCAGGTGTTC...GGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTGTGGAAACGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CCA 90 bp ACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: TKRAPRHLSAQTEGASVAWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...CGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
3UTR-3UTR CCA 90 bp CAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATTCCACTTTTGGAGAATaGTCTAATGCTCATGTAGCT +
Preference number: 2 (lower is better)
Translates to: QAAAFAGPAVHRLDDVHHSTFGE*SNAHVA
Trigger: AGCTACATGAGCATTAGACCATTCTCCAAAAGTGGA...ATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
3UTR-3UTR CCA 90 bp CCTGCCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCTGAGGTCAGAGGGCCCACTTTGGATTCTGTCATaGATTGAATTGTGTAACCGC +
Preference number: 2 (lower is better)
Translates to: PAQGHLVGQSLGLRSEGPLWILS*IELCNR
Trigger: GCGGTTACACAATTCAATCCATGACAGAATCCAAAG...TGGGCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR TCA 90 bp TTTCCACAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTGCACCACTCCTCACACACCAAGGAACTaGAAATACCACCAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: FPQQQSISRQQRALCTTPHTPRN*KYHQQP
Trigger: GGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTG...AGGAGTGGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR GCA 90 bp CACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATGCTCCTCTCACCACGTaGTTGTTTATTTCGGTGAGT +
Preference number: 2 (lower is better)
Translates to: HRSPSKPTQYAKRTGSQDAPLTT*LFISVS
Trigger: ACTCACCGAAATAAACAAGCACGTGGTGAGAGGAGC...ATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
3UTR-3UTR GCA 90 bp CCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTACTTGGTGGAAAGTCAATCATGATGTaGTTGTTCCGAGTAGGAGGC +
Preference number: 2 (lower is better)
Translates to: PRHLSAQTEGASVAVLGGKSIMM*LFRVGG
Trigger: GCCTCCTACTCGGAACAAGCACATCATGATTGACTT...TCCACCAAGTACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
3UTR-3UTR CCA 90 bp GGAGGCTCCACTTTTGGAGAATGGTCTAATGCTCATGTAGCTAATTCACCAACCTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 2 (lower is better)
Translates to: GGSTFGEWSNAHVANSPTWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...GGTTGGTGAATTAGCTACATGAGCATTAGACCATTCTCCAAAAGTGGAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585769.5
3UTR-3UTR TCA 90 bp TTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACATTTTGGCTTCTGTGTGCCACCAGCAGTGTGTaGGGGCTCCAATTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: LTVHLLMDTWVSTFWLLCATSSV*GLQFLH
Trigger: GTGGAGAAATTGGAGCCCTCACACACTGCTGGTGGC...ACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR GCA 90 bp GAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCACAAACCAACCCAGTATaGAAAACGCACAGGCTCACA +
Preference number: 2 (lower is better)
Translates to: EVSTHQGTENTTSSPQKPQTNPV*KTHRLT
Trigger: TGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTG...TGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
3UTR-3UTR TCA 90 bp TGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 2 (lower is better)
Translates to: CHRSPSKPTQYAKRTGSQACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...CTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
3UTR-3UTR CCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACAGCCTTCCAAGTAGCTaGGATTACAGGCACGCGCCA +
Preference number: 2 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHSLPSS*DYRHAP
Trigger: TGGCGCGTGCCTGTAATCCCAGCTACTTGGAAGGCT...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CCA 90 bp TTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACATTTTGGCTTCTGTGTCTGGTCGTGAACTCCTaGGCTCAAGCAATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: LTVHLLMDTWVSTFWLLCLVVNS*AQAICL
Trigger: CAGGCAGATTGCTTGAGCCCAGGAGTTCACGACCAG...ACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR GCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACCCTGTGTTACCACTTTaGCACCAGCAGTGTGTGAGG +
Preference number: 2 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHPVLPL*HQQCVR
Trigger: CCTCACACACTGCTGGTGGCAAAGTGGTAACACAGG...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CAA 90 bp GAGGTCACATACACGTTCTCCCTAGCCCCTCATTCCGATACGCTGTaGCACTCTCCTACTTTATACATAGAAAAATCAGCACTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: EVTYTFSLAPHSDTL*HSPTLYIEKSALGR
Trigger: TCTCCCAAGTGCTGATTTTTCTATGTATAAAGTAGGAGAGTGCAACAGCGTATCGGAATGAGGGGCTAGGGAGAACGTGTATGTGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR GCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTGCTCCTCTCACCACGTaGTTGTTTATTTCGGTGAGT +
Preference number: 2 (lower is better)
Translates to: FIKFPENKQVGLLLSPRAAPLTT*LFISVS
Trigger: ACTCACCGAAATAAACAAGCACGTGGTGAGAGGAGC...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269601.10
ENST00000585474.5
ENST00000588162.1
3UTR-3UTR GCA 90 bp TCATTCCGATACGCTGTTGCACTCTCCTACTTTATACATAGAAAAATCAGCACTAAGTGCCCCCATCCCTaGCCTTCCTCACTTTCACTT +
Preference number: 2 (lower is better)
Translates to: SFRYAVALSYFIHRKISTKCPHP*PSSLSL
Trigger: AAGTGAAAGTGAGGAAGGGCAGGGATGGGGGCACTT...AGTGCTGATTTTTCTATGTATAAAGTAGGAGAGTGCAACAGCGTATCGGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR TCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACTCTAACTATATGAACTaGAGGGCCATGGCTTCTACA +
Preference number: 2 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHSNYMN*RAMAST
Trigger: TGTAGAAGCCATGGCCCTTCAGTTCATATAGTTAGA...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR GCA 90 bp AGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTTATTAACACACATCTTGCTGAGCTGTaGTCGGATGTGATGAGACAA +
Preference number: 2 (lower is better)
Translates to: RTRNKVRKSPHYLPFINTHLAEL*SDVMRQ
Trigger: TTGTCTCATCACATCCGAGCACAGCTCAGCAAGATG...TGTGTTAATAAATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
3UTR-3UTR GCA 90 bp GGCACTTTTTCTGTTTATGCCTGCTCGGCTTATGTAAGCACATTTTCATTACATGCTCCTCTCACCACGTaGTTGTTTATTTCGGTGAGT +
Preference number: 2 (lower is better)
Translates to: GTFSVYACSAYVSTFSLHAPLTT*LFISVS
Trigger: ACTCACCGAAATAAACAAGCACGTGGTGAGAGGAGC...ATGTAATGAAAATGTGCTTACATAAGCCGAGCAGGCATAAACAGAAAAAGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CAA 90 bp AATATTCCGTTCTATGGATGGACATTTTGTTTAACCGTTCATCTGTaGATGGACACGTGGGTTTCCACATTTTGGCTTCTGTGTACGAGT +
Preference number: 2 (lower is better)
Translates to: NIPFYGWTFCLTVHL*MDTWVSTFWLLCTS
Trigger: ACTCGTACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCATAGAACGGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR TCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 2 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000588162.1
ENST00000592957.1
3UTR-3UTR TCA 90 bp GGCACTTTTTCTGTTTATGCCTGCTCGGCTTATGTAAGCACATTTTCATTACATAGGGCAAGAGAAACCTaGGACTGTAATAAGGACATT +
Preference number: 2 (lower is better)
Translates to: GTFSVYACSAYVSTFSLHRARET*DCNKDI
Trigger: AATGTCCTTATTACAGTCTCAGGTTTCTCTTGCCCT...ATGTAATGAAAATGTGCTTACATAAGCCGAGCAGGCATAAACAGAAAAAGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR TCA 90 bp TCATTCCGATACGCTGTTGCACTCTCCTACTTTATACATAGAAAAATCAGCACTAATTTTCTAACTATATaGACTGAAGGGCCATGGCTT +
Preference number: 2 (lower is better)
Translates to: SFRYAVALSYFIHRKISTNFLTI*TEGPWL
Trigger: AAGCCATGGCCCTTCAGTTCATATAGTTAGAAAATT...AGTGCTGATTTTTCTATGTATAAAGTAGGAGAGTGCAACAGCGTATCGGAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CCA 90 bp TGGTCTAATGCTCATGTAGCTAATTCACCAACCTCTATGGTAACTGAAGAAAAATCCACTTTTGGAGAATaGTCTAATGCTCATGTAGCT +
Preference number: 2 (lower is better)
Translates to: WSNAHVANSPTSMVTEEKSTFGE*SNAHVA
Trigger: AGCTACATGAGCATTAGACCATTCTCCAAAAGTGGA...TTTTTCTTCAGTTACCATAGAGGTTGGTGAATTAGCTACATGAGCATTAGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585769.5
3UTR GCA 72 bp TCTCCCGACAGCAGCGAGCCCTGTGCACCACTCCTGTaGCCGGCAGGCACCACGTGCTTCTGCGTCCACATC +
Preference number: 3 (lower is better)
Translates to: SPDSSEPCAPLL*PAGTTCFCVHI
Trigger: GATGTGGACGCAGAAGCACGTGGTGCCTGCCGGGCACAGGAGTGGTGCACAGGGCTCGCTGCTGTCGGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CAA 90 bp ACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGACCAGGCCGCGGCCTTaGCGGGCCCCGCGGTACACC +
Preference number: 3 (lower is better)
Translates to: TKRAPRHLSAQTEGASVATRPRP*RAPRYT
Trigger: GGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT...CGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
3UTR GCA 72 bp CAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTaGACCACTCCTGTGCCCGGCAGGCACCACGTGCTT +
Preference number: 3 (lower is better)
Translates to: QQQSISRQQRAL*TTPVPGRHHVL
Trigger: AAGCACGTGGTGCCTGCCGGGCACAGGAGTGGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 72 bp CAGAGGGCCCACGGTGTGCTCAAGTGCCCCCATCCCTaGCCTTCCTCACTTTCACTTCAGAGCTCGAGTGTG +
Preference number: 3 (lower is better)
Translates to: QRAHGVLKCPHP*PSSLSLQSSSV
Trigger: CACACTCGAGCTCTGAAGTGAAAGTGAGGAAGGGCAGGGATGGGGGCACTTGAGCACACCGTGGGCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CAA 90 bp CCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTACTTGGTGGACTAGCTAAGAGCATCTaGCTGAGCTGTGCTCGGATG +
Preference number: 3 (lower is better)
Translates to: PRHLSAQTEGASVAVLGGLAKSI*LSCARM
Trigger: CATCCGAGCACAGCTCAGCAAGATGCTCTTAGCTAG...TCCACCAAGTACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585769.5
3UTR GCA 72 bp CGGCAGGCACCACGTGCTTCTGCGTCCACATCTGTGTaGAGGGCAGACACTATTATCCGCCTTTACCAAGGA +
Preference number: 3 (lower is better)
Translates to: RQAPRASASTSV*RADTIIRLYQG
Trigger: TCCTTGGTAAAGGCGGATAATAGTGTCTGCCCTGCACACAGATGTGGACGCAGAAGCACGTGGTGCCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR-3UTR CAA 90 bp CCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTACTTGGTGGATCAATCATGATGTGCTaGTTCCGAGTAGGAGGCTCC +
Preference number: 3 (lower is better)
Translates to: PRHLSAQTEGASVAVLGGSIMMC*FRVGGS
Trigger: GGAGCCTCCTACTCGGAACAAGCACATCATGATTGA...TCCACCAAGTACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
3UTR TCA 72 bp TTTTGGACACCAGCACCCACACAGGGAGGACACAGGTaGAGGCAGAGATGGGGCGAAGTATCCACACACCAA +
Preference number: 3 (lower is better)
Translates to: FWTPAPTQGGHR*RQRWGEVSTHQ
Trigger: TTGGTGTGTGGATACTTCGCCCCATCTCTGCCTTCACCTGTGTCCTCCCTGTGTGGGTGCTGGTGTCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
3UTR TCA 72 bp GCCCTTCCTCACTTTCACTTCAGAGCTCGAGTGTGCTaGGACGGGACACGAAGATCCCAACCAACCATCCAC +
Preference number: 3 (lower is better)
Translates to: ALPHFHFRARVC*DGTRRSQPTIH
Trigger: GTGGATGGTTGGTTGGGATCTTCGTGTCCCGTCTCAGCACACTCGAGCTCTGAAGTGAAAGTGAGGAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 72 bp TTACCAAGGAGGAAACAAAGCTCAGAGAAGGTACCCTaGCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: LPRRKQSSEKVP*PRSLGGAEPGS
Trigger: AGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGGGTACCTTCTCTGAGCTTTGTTTCCTCCTTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR TCA 72 bp CTTGAGACACCTGCACCCGGCCCATGTTTAACTTTTTaGCGACCTGCCTGCCTGTGTTACCACTTTGCCACC +
Preference number: 3 (lower is better)
Translates to: LETPAPGPCLTF*RPACLCYHFAT
Trigger: GGTGGCAAAGTGGTAACACAGGCAGGCAGGTCGTCAAAAAGTTAAACATGGGCCGGGTGCAGGTGTCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 72 bp ACCTGCACCCGGCCCATGTTTAACTTTTTGACGACCTaGCTGCCTGTGTTACCACTTTGCCACCAGCAGTGT +
Preference number: 3 (lower is better)
Translates to: TCTRPMFNFLTT*LPVLPLCHQQC
Trigger: ACACTGCTGGTGGCAAAGTGGTAACACAGGCAGGCAGGTCGTCAAAAAGTTAAACATGGGCCGGGTGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CCA 72 bp GTTCATCTGTTGATGGACACGTGGGTTTCCACATTTTaGCTTCTGTGTACGAGTTTCTATGTGGACATATGC +
Preference number: 3 (lower is better)
Translates to: VHLLMDTWVSTF*LLCTSFYVDIC
Trigger: GCATATGTCCACATAGAAACTCGTACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CCA 72 bp ATCTTTTTGTATCTAGCCGAACTTGTAGGTGTGAAGTaGCGTCTCACTGTGGTTTTGATTTGCACCTTCCTT +
Preference number: 3 (lower is better)
Translates to: IFLYLAELVGVK*RLTVVLICTFL
Trigger: AAGGAAGGTGCAAATCAAAACCACAGTGAGACGCCACTTCACACCTACAAGTTCGGCTAGATACAAAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CCA 72 bp ACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTaGGTTTCCACATTTTGGCTTCTGTGTACGAGTTTC +
Preference number: 3 (lower is better)
Translates to: TFCLTVHLLMDT*VSTFWLLCTSF
Trigger: GAAACTCGTACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR TCA 72 bp GCCTGGCCAATAAGGAAATTTTCTAACTATATGAACTaGAGGGCCATGGCTTCTACAGAAAATATGTTTACA +
Preference number: 3 (lower is better)
Translates to: AWPIRKFSNYMN*RAMASTENMFT
Trigger: TGTAAACATATTTTCTGTAGAAGCCATGGCCCTTCAGTTCATATAGTTAGAAAATTTCCTTATTGGCCAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR GCA 72 bp ACCATTATCACAATCTTAGGGCACTTTTTCTGTTTATaGCTGCTCGGCTTATGTAAGCACATTTTCATTACA +
Preference number: 3 (lower is better)
Translates to: TIITILGHFFCL*LLGLCKHIFIT
Trigger: TGTAATGAAAATGTGCTTACATAAGCCGAGCAGGCATAAACAGAAAAAGTGCCCTAAGATTGTGATAATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR TCA 72 bp AGACATAATTCACACATCATCCACCAATTATGCAATTaGCAGAATTGTACCATTATCACAATCTTAGGGCAC +
Preference number: 3 (lower is better)
Translates to: RHNSHIIHQLCN*QNCTIITILGH
Trigger: GTGCCCTAAGATTGTGATAATGGTACAATTCTGTCAATTGCATAATTGGTGGATGATGTGTGAATTATGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CCA 72 bp TCTATGGATGTGCCTATTCTAGAAATTCCGTATAAATaGAATCACACAATATGTAGTAACTGGCTTTTCACT +
Preference number: 3 (lower is better)
Translates to: SMDVPILEIPYK*NHTICSNWLFT
Trigger: AGTGAAAAGCCAGTTACTACATATTGTGTGATTCCATTTATACGGAATTTCTAGAATAGGCACATCCATAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TGGAGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTGGAGCATGTACGACATaGCGGCCCGCGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: WSSPWGTPPGRGLCGPRGGACTT*RPARSP
Trigger: CGGCGAGCGCGCGGGCCGCCATGTCGTACATGCTCC...ACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp TGGAGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTCGTGGCCGAAGCGGATaGCGACCACGCGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WSSPWGTPPGRGLCGPRGRGRSG*RPRGPP
Trigger: AGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACG...ACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp CACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCGTGGCCGAAGCGGATaGCGACCACGCGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HQAAAFAGPAVHRLDDVHRGRSG*RPRGPP
Trigger: AGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACG...GTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp CCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTTTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: PWGTPPGRGLCGPRGTPSFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...AGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp TTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGTTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LGDTTRPRPLRAPRYTVSFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...CGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CCA 90 bp TTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGACACGCAAACTCCGCTaGGACTGCCACCCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGDTTRPRPLRAPRYTVSTRKLR*DCHPAE
Trigger: TTCTGCCGGGTGGCAGTCCCAGCGGAGTTTGCGTGT...CGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR GCA 90 bp GGAGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACAGCCGTTGTGCAGGTaGGGGAGCATGTACGACATG +
Preference number: 4 (lower is better)
Translates to: GVVLGGHHQAAAFAGPAVQPLCR*GSMYDM
Trigger: CATGTCGTACATGCTCCCGCACCTGCACAACGGCTG...TACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR GCA 90 bp AGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACAAAACTCCGCTGGGACTaGCACCCGGCAGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: SSPWGTPPGRGLCGPRGTKLRWD*HPAERL
Trigger: CAGACGTTCTGCCGGGTGGCAGTCCCAGCGGAGTTT...TGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR CCA 90 bp ACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: TRPRPLRAPRYTVSMMSTVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...GGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CCA 90 bp AGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATCTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RPRPLRAPRYTVSMMSTIWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...GATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp AGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACAGCCGGCAGCAGGATCTaGACACCACCCGATGTTTAT +
Preference number: 4 (lower is better)
Translates to: SSPWGTPPGRGLCGPRGTAGSRI*TPPDVY
Trigger: ATAAACATCGGGTGGTGTTCAGATCCTGCTGCCGGC...TGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR TCA 90 bp TTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGCTAAGAGCATCTTGCTaGGCTGTGCTCGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: LGDTTRPRPLRAPRYTVSLRASC*AVLGCD
Trigger: ATCACATCCGAGCACAGCTCAGCAAGATGCTCTTAG...CGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR GCA 90 bp GCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATCTCCCACCTTCTCGGCGATaGTGTACAGGACCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: AAAFAGPAVHRLDDVHHLPPSRR*CTGPRP
Trigger: TGGACGAGGTCCTGTACAGCATCGCCGAGAAGGTGG...GAGATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR CCA 90 bp GCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTACTTGGTGGAGCATGTACGACATaGCGGCCCGCGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: APRHLSAQTEGASVAVLGGACTT*RPARSP
Trigger: CGGCGAGCGCGCGGGCCGCCATGTCGTACATGCTCC...ACCAAGTACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CCA 90 bp CCTGCCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCTGAGGTCAGAGGGCCCAGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: PAQGHLVGQSLGLRSEGPVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...TGGGCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TGGAGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: WSSPWGTPPGRGLCGPRGSSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...ACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp CCTGCCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCTGAGGTCAGAGGGCCCAAGAGCTCGAGTGTGCTaGGACGGGACACGAAGATCC +
Preference number: 4 (lower is better)
Translates to: PAQGHLVGQSLGLRSEGPRARVC*DGTRRS
Trigger: GGATCTTCGTGTCCCGTCTCAGCACACTCGAGCTCT...TGGGCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp TTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGGCTCCTCTCACCACGTaGTTGTTTATTTCGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LGDTTRPRPLRAPRYTVSAPLTT*LFISVS
Trigger: ACTCACCGAAATAAACAAGCACGTGGTGAGAGGAGC...CGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588162.1
CDS-3UTR GCA 90 bp CTCCCGTTTCCACAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTGCACCCAGCAGCGAGCCCTGTaGACCACTCCTGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPFPQQQSISRQQRALCTQQRAL*TTPVPG
Trigger: GCCGGGCACAGGAGTGGTGCACAGGGCTCGCTGCTG...GGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTGTGGAAACGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp GCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATCTCCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: AAAFAGPAVHRLDDVHHLLSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...GAGATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp AGCGTTGCAGGTGAGGCCTGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCTCCCAGCGTTGCAGGTaGGGCCTGGTGGGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SVAGEAWWEATGSWDEFLSQRCR*GLVGGD
Trigger: GTCGCCTCCCACCAGGCCTCACCTGCAACGCTGGGA...GAGAAATTCATCCCATGATCCAGTCGCCTCCCACCAGGCCTCACCTGCAACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp AACGTAACTCCCAGCGTTGCAGGTGAGGCCTGGTGGGAGGCGACTGGATCATGGACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: NVTPSVAGEAWWEATGSWTCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...CCATGATCCAGTCGCCTCCCACCAGGCCTCACCTGCAACGCTGGGAGTTACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR CCA 90 bp AACGTAACTCCCAGCGTTGCAGGTGAGGCCTGGTGGGAGGCGACTGGATCATGGGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: NVTPSVAGEAWWEATGSWVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...CCATGATCCAGTCGCCTCCCACCAGGCCTCACCTGCAACGCTGGGAGTTACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp CCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTACTTGGTGGAACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: PRHLSAQTEGASVAVLGGTCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...TCCACCAAGTACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR GCA 90 bp ACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATATGTGCACCACTCCTGTaGCCGGCAGGCACCACGTGC +
Preference number: 4 (lower is better)
Translates to: TAAPANQPSMQNAQAHRICAPLL*PAGTTC
Trigger: GCACGTGGTGCCTGCCGGGCACAGGAGTGGTGCACA...TATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp AAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCAGGGAGCATGTACGACATaGCGGCCCGCGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: KYPHTKELKIPPAAPRSQGACTT*RPARSP
Trigger: CGGCGAGCGCGCGGGCCGCCATGTCGTACATGCTCC...CTGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: CHRSPSKPTQYAKRTGSQWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...CTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
3UTR CAA 72 bp AACAAAGCTCAGAGAAGGTACCCTGCCCAAGGTCACTaGGTGGGGCAGAGCCTGGGTCTGAGGTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NKAQRRYPAQGH*VGQSLGLRSEG
Trigger: GCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGGGTACCTTCTCTGAGCTTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp CCTGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCATCAATGGTTGAGCGTCGTGGCCGAAGCGGATaGCGACCACGCGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGRRLDHGMNFSSMVERRGRSG*RPRGPP
Trigger: AGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACG...ACGCTCAACCATTGATGAGAAATTCATCCCATGATCCAGTCGCCTCCCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp CAGAGCTCGAGTGTGCTGAGACGGGACACGAAGATCCCAACCAACCATCCACACACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: QSSSVLRRDTKIPTNHPHTCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...GTGTGGATGGTTGGTTGGGATCTTCGTGTCCCGTCTCAGCACACTCGAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp GCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATCTCAAGTCAATCATGATGTaGTTGTTCCGAGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AAAFAGPAVHRLDDVHHLKSIMM*LFRVGG
Trigger: GCCTCCTACTCGGAACAAGCACATCATGATTGACTT...GAGATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
CDS-3UTR CCA 90 bp AAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTAGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: KRAPRHLSAQTEGASVAVVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...TACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR GCA 90 bp AAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGGTACAGCCGTTGTGCAGGTaGGGGAGCATGTACGACATG +
Preference number: 4 (lower is better)
Translates to: KRAPRHLSAQTEGASVAVQPLCR*GSMYDM
Trigger: CATGTCGTACATGCTCCCGCACCTGCACAACGGCTG...TACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR GCA 90 bp AACGTAACTCCCAGCGTTGCAGGTGAGGCCTGGTGGGAGGCGACTGGATCATGGACTTCCTGTACAGCCTaGAGAACTTCTCGGCGATGC +
Preference number: 4 (lower is better)
Translates to: NVTPSVAGEAWWEATGSWTSCTA*RTSRRC
Trigger: GCATCGCCGAGAAGTTCTGCAGGCTGTACAGGAAGT...CCATGATCCAGTCGCCTCCCACCAGGCCTCACCTGCAACGCTGGGAGTTACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR CCA 90 bp CATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTATGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: HTKRAPRHLSAQTEGASVWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...TACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp CATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTATTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: HTKRAPRHLSAQTEGASVFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...TACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR TCA 90 bp CACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATTGGAGTGCAGTGGTGTaGTCTCGGCTCACTGAAACC +
Preference number: 4 (lower is better)
Translates to: HRSPSKPTQYAKRTGSQDWSAVV*SRLTET
Trigger: GGTTTCAGTGAGCCGAGATCACACCACTGCACTCCA...ATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp CATCTTGCTGAGCTGTGCTCGGATGTGATGAGACAAAGGCCCTCACATCTCCAGACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: HLAELCSDVMRQRPSHLQTCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...CTGGAGATGTGAGGGCCTTTGTCTCATCACATCCGAGCACAGCTCAGCAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585769.5
ENST00000586825.1
CDS-3UTR GCA 90 bp CGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCGTTAAGATTAGGCCATaGTGGAGCAGGGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RFHTKRAPRHLSAQTEGAVKIRP*WSRVGP
Trigger: GGGGCCCACCCTGCTCCAGCATGGCCTAATCTTAAC...GGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp ACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKRAPRHLSAQTEGASVALSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...CGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CCA 90 bp AAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCAGCTGCCCAAGGTCACTTaGTGGGGCAGAGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KYPHTKELKIPPAAPRSQLPKVT*WGRAWV
Trigger: GACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAG...CTGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp CGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCGGCTCCAGCCTCCAGTaGTGGGTATCCTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RFHTKRAPRHLSAQTEGAGSSLQ*WVSSFQ
Trigger: TTGGAAGGAGGATACCCACCACTGGAGGCTGGAGCC...GGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS-3UTR CCA 90 bp GGGATGAATTTCTCATCAATGGTTGAGCGTCATCCTCTTGGTGCTGTCCTCGGGGCAGGTGAGGCCTGGTaGGAGGCGACTGGATCATGG +
Preference number: 4 (lower is better)
Translates to: GMNFSSMVERHPLGAVLGAGEAW*EATGSW
Trigger: CCATGATCCAGTCGCCTCCCACCAGGCCTCACCTGC...CCCGAGGACAGCACCAAGAGGATGACGCTCAACCATTGATGAGAAATTCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR TCA 90 bp ATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTTGTCGTGGCCGAAGCGGATaGCGACCACGCGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IKFPENKQVGLLLSPRACRGRSG*RPRGPP
Trigger: AGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACG...ACAAGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000588162.1
CDS-3UTR TCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTGGCAGAGCCTGGGTCTaGGGTCAGAGGGCCCACGGT +
Preference number: 4 (lower is better)
Translates to: FIKFPENKQVGLLLSPRAGRAWV*GQRAHG
Trigger: ACCGTGGGCCCTCTGACCTCAGACCCAGGCTCTGCC...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp AGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCTGCCCAGGCTGGTCGTaGACTCCTGGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: RQRWGEVSTHQGTENTTSCPGWS*TPGLKQ
Trigger: TTGCTTGAGCCCAGGAGTTCACGACCAGCCTGGGCA...GCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp CTTGCTGAGCTGTGCTCGGATGTGATGAGACAAAGGCCCTCACATCTCCAGCCAGCCGGCAGCAGGATCTaGACACCACCCGATGTTTAT +
Preference number: 4 (lower is better)
Translates to: LAELCSDVMRQRPSHLQPAGSRI*TPPDVY
Trigger: ATAAACATCGGGTGGTGTTCAGATCCTGCTGCCGGC...TGGCTGGAGATGTGAGGGCCTTTGTCTCATCACATCCGAGCACAGCTCAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585769.5
ENST00000586825.1
CDS-3UTR GCA 90 bp CAGGTGAGGCCTGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCATCAATGCAGCCGTTGTGCAGGTaGGGGAGCATGTACGACATG +
Preference number: 4 (lower is better)
Translates to: QVRPGGRRLDHGMNFSSMQPLCR*GSMYDM
Trigger: CATGTCGTACATGCTCCCGCACCTGCACAACGGCTG...CATTGATGAGAAATTCATCCCATGATCCAGTCGCCTCCCACCAGGCCTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp CGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCGTTCCTTCTCGGCGATaGTGTACAGGACCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RFHTKRAPRHLSAQTEGAVPSRR*CTGPRP
Trigger: TGGACGAGGTCCTGTACAGCATCGCCGAGAAGGAAC...GGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588162.1
CDS-3UTR GCA 90 bp GAGCATCTTGCTGAGCTGTGCTCGGATGTGATGAGACAAAGGCCCTCACATCTCCCACCTTCTCGGCGATaGTGTACAGGACCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: EHLAELCSDVMRQRPSHLPPSRR*CTGPRP
Trigger: TGGACGAGGTCCTGTACAGCATCGCCGAGAAGGTGG...GAGATGTGAGGGCCTTTGTCTCATCACATCCGAGCACAGCTCAGCAAGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585769.5
ENST00000586825.1
CDS-3UTR CCA 90 bp ACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATACTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TAAPANQPSMQNAQAHRILSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...TATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp CGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RFHTKRAPRHLSAQTEGALSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...GGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CCA 90 bp CCTGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCATCAATGGTTGAGCGTGTTGCAGGTGAGGCCTaGTGGGAGGCGACTGGATCA +
Preference number: 4 (lower is better)
Translates to: PGGRRLDHGMNFSSMVERVAGEA*WEATGS
Trigger: TGATCCAGTCGCCTCCCACCAGGCCTCACCTGCAAC...ACGCTCAACCATTGATGAGAAATTCATCCCATGATCCAGTCGCCTCCCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR TCA 90 bp ATATCCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTCGTGGCCGAAGCGGATaGCGACCACGCGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ISRQNSEQGKEESPLSAIRGRSG*RPRGPP
Trigger: AGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACG...AATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR TCA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCTTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR TCA 90 bp TTTCCACAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTGCACCACTCCTCCGCCTGCAAAGCTGTaGGAGCACACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: FPQQQSISRQQRALCTTPPPAKL*EHTSLL
Trigger: TAACAGAGATGTGTGCTCTCACAGCTTTGCAGGCGG...AGGAGTGGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTGTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGAACACCTGACTTCGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGEHLTS*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACGAAGTCAGGTGTTC...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp GAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCAGTTAAGATTAGGCCATaGTGGAGCAGGGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EVSTHQGTENTTSSPQKPVKIRP*WSRVGP
Trigger: GGGGCCCACCCTGCTCCAGCATGGCCTAATCTTAAC...TGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR GCA 90 bp ACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAAGTGCCCCCATCCCTaGCCTTCCTCACTTTCACTT +
Preference number: 4 (lower is better)
Translates to: TAAPANQPSMQNAQAHRIKCPHP*PSSLSL
Trigger: AAGTGAAAGTGAGGAAGGGCAGGGATGGGGGCACTT...TATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp CTTGCTGAGCTGTGCTCGGATGTGATGAGACAAAGGCCCTCACATCTCCAGCCAAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LAELCSDVMRQRPSHLQPSSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...TGGCTGGAGATGTGAGGGCCTTTGTCTCATCACATCCGAGCACAGCTCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR CCA 90 bp GCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCAAGATTAGGCCATGCTaGAGCAGGGTGGGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: AKYPHTKELKIPPAAPRSKIRPC*SRVGPN
Trigger: ATTGGGGCCCACCCTGCTCCAGCATGGCCTAATCTT...GCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACAGCCCGCCGAGTAGCTaGGCCCACAGGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHSPPSS*AHRHAP
Trigger: TGGTGCGTGCCTGTGGGCCCAGCTACTCGGCGGGCT...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CAA 72 bp CCAACACAGCTGGTGTCACTACGAAAAGGGGAAATTTaGGACACCAGCACCCACACAGGGAGGACACAGGTG +
Preference number: 4 (lower is better)
Translates to: PTQLVSLRKGEI*DTSTHTGRTQV
Trigger: CACCTGTGTCCTCCCTGTGTGGGTGCTGGTGTCCAAAATTTCCCCTTTTCGTAGTGACACCAGCTGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR TCA 90 bp CAGGTGAGGCCTGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCATCAATGATGATTGGAAGGTCCTaGGGCCTCCCCAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QVRPGGRRLDHGMNFSSMMIGRS*GLPRSK
Trigger: TTTGCTTCTGGGGAGGCCTCAGGACCTTCCAATCAT...CATTGATGAGAAATTCATCCCATGATCCAGTCGCCTCCCACCAGGCCTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR TCA 90 bp CCTGGTGGGAGGCGACTGGATCATGGGATGAATTTCTCATCAATGGTTGAGCGTCTTTGCCTTCTGCCATaGTTGGAAGGTCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGGRRLDHGMNFSSMVERLCLLP*LEGPEA
Trigger: GGCCTCAGGACCTTCCAATCATGGCAGAAGGCAAAG...ACGCTCAACCATTGATGAGAAATTCATCCCATGATCCAGTCGCCTCCCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp TGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGCAAACCAACCCAGTATaGAAAACGCACAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: CHRSPSKPTQYAKRTGSQQTNPV*KTHRLT
Trigger: TGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTG...CTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR GCA 90 bp CGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCGCCGTCTGTTTCACCTaGTCTGGAGAAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RFHTKRAPRHLSAQTEGAAVCFT*SGEIAG
Trigger: TCCTGCTATTTCTCCAGAGCAGGTGAAACAGACGGC...GGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp CATCTTGCTGAGCTGTGCTCGGATGTGATGAGACAAAGGCCCTCACATCTCCAGACCACCCGATGTTTATaGCACCACCTTCTCGGCGAT +
Preference number: 4 (lower is better)
Translates to: HLAELCSDVMRQRPSHLQTTRCL*HHLLGD
Trigger: ATCGCCGAGAAGGTGGTGGCATAAACATCGGGTGGT...CTGGAGATGTGAGGGCCTTTGTCTCATCACATCCGAGCACAGCTCAGCAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585769.5
ENST00000586825.1
CDS-3UTR GCA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCATCCTAGCCTCGAGCTaGCGGCAGCAGGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGILASS*RQQDLN
Trigger: GTTCAGATCCTGCTGCCGGCAGCTCGAGGCTAGGAT...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR CCA 90 bp CAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTCTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: QPSMQNAQAHRINTFVLLWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...GAGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: FIKFPENKQVGLLLSPRAWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269601.10
ENST00000585474.5
ENST00000588162.1
CDS-3UTR CCA 90 bp CATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: HTKRAPRHLSAQTEGASVSSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...TACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CCA 90 bp AACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGTTCCAAGGTCAGGACTaGCGTTGTCTTCACCCCGCT +
Preference number: 4 (lower is better)
Translates to: NVSIQKGLHDIYPRRLRAFQGQD*RCLHPA
Trigger: AGCGGGGTGAAGACAACGCCAGTCCTGACCTTGGAA...CGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS-3UTR TCA 90 bp AAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCAGCACACACCAAGGAACTaGAAATACCACCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KYPHTKELKIPPAAPRSQHTPRN*KYHQQP
Trigger: GGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTG...CTGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR TCA 90 bp CCAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTCAGGGAGGACACAGGTaGAGGCAGAGATGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: PTQYAKRTGSQDKHLRFTQGGHR*RQRWGE
Trigger: TTCGCCCCATCTCTGCCTTCACCTGTGTCCTCCCTG...AGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR GCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: FIKFPENKQVGLLLSPRATCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000588162.1
CDS-3UTR GCA 90 bp ACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAGGCACGCGCCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: TAAPANQPSMQNAQAHRIRHAPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGCGCGTGCCT...TATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp AAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCAGCCTGTGTTACCACTTTaGCACCAGCAGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KYPHTKELKIPPAAPRSQPVLPL*HQQCVR
Trigger: CCTCACACACTGCTGGTGGCAAAGTGGTAACACAGG...CTGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp CGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCCATCTTGCTGAGCTGTaGTCGGATGTGATGAGACAA +
Preference number: 4 (lower is better)
Translates to: RFHTKRAPRHLSAQTEGAHLAEL*SDVMRQ
Trigger: TTGTCTCATCACATCCGAGCACAGCTCAGCAAGATG...GGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR GCA 90 bp CCAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTTCGCCCACCTCGCGCTaGCCTTCTCGCTTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTQYAKRTGSQDKHLRFTSPTSR*PSRFSL
Trigger: AAGACTGAAGCGAGAAGGGCAGCGCGAGGTGGGCGA...AGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585474.5
CDS-3UTR CCA 90 bp GGAGGCTCCACTTTTGGAGAATGGTCTAATGCTCATGTAGCTAATTCACCAACCGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: GGSTFGEWSNAHVANSPTVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...GGTTGGTGAATTAGCTACATGAGCATTAGACCATTCTCCAAAAGTGGAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR CCA 90 bp AAACAGCTGGAATATCCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: KQLEYPDRTRNKVRKSPHVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...ATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGGATATTCCAGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR CCA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTEWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CCA 90 bp AACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: NVSIQKGLHDIYPRRLRASSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...CGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CCA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGLSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CCA 90 bp GAAGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAAAGATTAGGCCATGCTaGAGCAGGGTGGGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: EGRDGAKYPHTKELKIPPKIRPC*SRVGPN
Trigger: ATTGGGGCCCACCCTGCTCCAGCATGGCCTAATCTT...TGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp GAAGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCACTGGTCGTGAACTCCTaGGCTCAAGCAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EGRDGAKYPHTKELKIPPLVVNS*AQAICL
Trigger: CAGGCAGATTGCTTGAGCCCAGGAGTTCACGACCAG...TGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp CAGAGCTCGAGTGTGCTGAGACGGGACACGAAGATCCCAACCAACCATCCACACCTGTTGATGGACACGTaGGTTTCCACATTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QSSSVLRRDTKIPTNHPHLLMDT*VSTFWL
Trigger: AAGCCAAAATGTGGAAACCCACGTGTCCATCAACAG...GTGTGGATGGTTGGTTGGGATCTTCGTGTCCCGTCTCAGCACACTCGAGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACTTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGTTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTEFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR TCA 90 bp TGCTGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCAGTCTCACTGTGGTTTTaGTTTGCACCTTCCTTAACA +
Preference number: 4 (lower is better)
Translates to: CCHRSPSKPTQYAKRTGSVSLWF*FAPSLT
Trigger: TGTTAAGGAAGGTGCAAATCAAAACCACAGTGAGAC...TGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp CTATTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTACACGCAAACTCCGCTaGGACTGCCACCCGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LFIKFPENKQVGLLLSPRTRKLR*DCHPAE
Trigger: TTCTGCCGGGTGGCAGTCCCAGCGGAGTTTGCGTGT...ACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGTGGTGGAGTAGTCCTTaGGGGACACCACCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQWWSSP*GTPPGR
Trigger: GCGGCCTGGTGGTGTCCCCCAAGGACTACTCCACCA...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR TCA 90 bp ACCTGCCTGCCTGTGTTACCACTTTGCCACCAGCAGTGTGTGAGGGCTCCAATTAGGGCAAGAGAAACCTaGGACTGTAATAAGGACATT +
Preference number: 4 (lower is better)
Translates to: TCLPVLPLCHQQCVRAPIRARET*DCNKDI
Trigger: AATGTCCTTATTACAGTCTCAGGTTTCTCTTGCCCT...AATTGGAGCCCTCACACACTGCTGGTGGCAAAGTGGTAACACAGGCAGGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACGCCACCAGCAGTGTGTaGGGGCTCCAATTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHATSSV*GLQFLH
Trigger: GTGGAGAAATTGGAGCCCTCACACACTGCTGGTGGC...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACCAGCCGTTGTGCAGGTaGGGGAGCATGTACGACATG +
Preference number: 4 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHQPLCR*GSMYDM
Trigger: CATGTCGTACATGCTCCCGCACCTGCACAACGGCTG...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp CCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTTATTCAGCCGTTGTGCAGGTaGGGGAGCATGTACGACATG +
Preference number: 4 (lower is better)
Translates to: PDRTRNKVRKSPHYLPFIQPLCR*GSMYDM
Trigger: CATGTCGTACATGCTCCCGCACCTGCACAACGGCTG...AATAAATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR GCA 90 bp GAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCCAGCTCCTCTCACCACGTaGTTGTTTATTTCGGTGAGT +
Preference number: 4 (lower is better)
Translates to: EVSTHQGTENTTSSPQKPAPLTT*LFISVS
Trigger: ACTCACCGAAATAAACAAGCACGTGGTGAGAGGAGC...TGGCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR GCA 90 bp CAGAGCTCGAGTGTGCTGAGACGGGACACGAAGATCCCAACCAACCATCCACACTTCTATGTGGACATATaGGTTCAATTCTCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: QSSSVLRRDTKIPTNHPHFYVDI*VQFSWV
Trigger: TACCCAGGAGAATTGAACGCATATGTCCACATAGAA...GTGTGGATGGTTGGTTGGGATCTTCGTGTCCCGTCTCAGCACACTCGAGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp TCCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTTATATCCTAGCCTCGAGCTaGCGGCAGCAGGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: SRQNSEQGKEESPLSAIYILASS*RQQDLN
Trigger: GTTCAGATCCTGCTGCCGGCAGCTCGAGGCTAGGAT...ATAAATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR GCA 90 bp CATGGGATGAATTTCTCATCAATGGTTGAGCGTCATCCTCTTGGTGCTGTCCTCAGAACTTCTCGGCGATaGTGTACAGGACCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: HGMNFSSMVERHPLGAVLRTSRR*CTGPRP
Trigger: TGGACGAGGTCCTGTACAGCATCGCCGAGAAGTTCT...GAGGACAGCACCAAGAGGATGACGCTCAACCATTGATGAGAAATTCATCCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR CCA 90 bp CAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTCCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QPSMQNAQAHRINTFVLLLSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...GAGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp AGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCCTTGTAGGTGTGAAGTaGCGTCTCACTGTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: RQRWGEVSTHQGTENTTSLVGVK*RLTVVL
Trigger: CAAAACCACAGTGAGACGCCACTTCACACCTACAAG...GCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp ACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCCTCAGTAGCGTCCACTTTTGGAGAATaGTCTAATGCTCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: TKRAPRHLSAQTEGASVASTFGE*SNAHVA
Trigger: AGCTACATGAGCATTAGACCATTCTCCAAAAGTGGA...CGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
CDS-3UTR CCA 90 bp AGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTAACGCCTCTTTCCAGTaGCTCCAGCCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLKRFHTKRAPRHLSAQTNASFQ*LQPPVV
Trigger: CACCACTGGAGGCTGGAGCCACTGGAAAGAGGCGTT...AGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS-3UTR TCA 90 bp GTTTATTTCGGTGAGTTAAGACCATGTTATCAATTCCATCTCAGAGGTGCTCCATTTATCCGCGCAGACTaGGGGCGCCTCAGTAGCGGT +
Preference number: 4 (lower is better)
Translates to: VYFGELRPCYQFHLRGAPFIRAD*GRLSSG
Trigger: ACCGCTACTGAGGCGCCCTCAGTCTGCGCGGATAAA...TGGAGCACCTCTGAGATGGAATTGATAACATGGTCTTAACTCACCGAAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000588162.1
ENST00000592957.1
CDS-3UTR TCA 90 bp GCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCAGCCCCCAGAAGCTCTAACTATATGAACTaGAGGGCCATGGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: AKYPHTKELKIPPAAPRSSNYMN*RAMAST
Trigger: TGTAGAAGCCATGGCCCTTCAGTTCATATAGTTAGA...GCTTCTGGGGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp TGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGAATTTTCTAACTATATaGACTGAAGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: CHRSPSKPTQYAKRTGSQNFLTI*TEGPWL
Trigger: AAGCCATGGCCCTTCAGTTCATATAGTTAGAAAATT...CTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp CAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTCTCCACACTGCTAGGATaGCAGAGGGCAAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: QPSMQNAQAHRINTFVLLSTLLG*QRARET
Trigger: GGTTTCTCTTGCCCTCTGTCATCCTAGCAGTGTGGA...GAGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp CATGGGATGAATTTCTCATCAATGGTTGAGCGTCATCCTCTTGGTGCTGTCCTCGCCCAAATCTCAGGTTaGAACGTAACTCCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: HGMNFSSMVERHPLGAVLAQISG*NVTPSV
Trigger: AACGCTGGGAGTTACGTTTCAACCTGAGATTTGGGC...GAGGACAGCACCAAGAGGATGACGCTCAACCATTGATGAGAAATTCATCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp TCAAAGATTCACACTGATTGCCTGGTGATACAAACGATTTTGGGACATGACTGTACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: SKIHTDCLVIQTILGHDCTCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...ACAGTCATGTCCCAAAATCGTTTGTATCACCAGGCAATCAGTGTGAATCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591711.5
CDS-3UTR GCA 90 bp TCATTCCGATACGCTGTTGCACTCTCCTACTTTATACATAGAAAAATCAGCACTCACGGTGTGCTCAAGTaGCCCCATCCCTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SFRYAVALSYFIHRKISTHGVLK*PHPCPS
Trigger: GGAAGGGCAGGGATGGGGGCACTTGAGCACACCGTG...AGTGCTGATTTTTCTATGTATAAAGTAGGAGAGTGCAACAGCGTATCGGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TCAAAGATTCACACTGATTGCCTGGTGATACAAACGATTTTGGGACATGACTGTGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACC +
Preference number: 4 (lower is better)
Translates to: SKIHTDCLVIQTILGHDCVGSQS*PKRMTT
Trigger: GGTCGTCATCCGCTTCGGCCACGACTGGGATCCTAC...ACAGTCATGTCCCAAAATCGTTTGTATCACCAGGCAATCAGTGTGAATCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591711.5
CDS-3UTR CCA 90 bp ACATATGCGTTCAATTCTCCTGGGTATGAAACTGCTGGGTCAAATGGTAACACCAGCCTTCCAAGTAGCTaGGATTACAGGCACGCGCCA +
Preference number: 4 (lower is better)
Translates to: TYAFNSPGYETAGSNGNTSLPSS*DYRHAP
Trigger: TGGCGCGTGCCTGTAATCCCAGCTACTTGGAAGGCT...GGTGTTACCATTTGACCCAGCAGTTTCATACCCAGGAGAATTGAACGCATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp AACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCTGTTTCACCTGCTCTaGAGAAATAGCAGGAGTGTA +
Preference number: 4 (lower is better)
Translates to: NVSIQKGLHDIYPRRLRALFHLL*RNSRSV
Trigger: TACACTCCTGCTATTTCTCCAGAGCAGGTGAAACAG...CGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGTCCAGCCTCCAGTGGTaGGTATCCTCCTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTESSLQW*VSSFQG
Trigger: ACCTTGGAAGGAGGATACCCACCACTGGAGGCTGGA...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
3UTR CAA 72 bp CCAGCAGTGTGTGAGGGCTCCAATTTCTCCACATCCTaGCAAACGCTTGTTGCGATCTTTTTGTATCTAGCC +
Preference number: 4 (lower is better)
Translates to: PAVCEGSNFSTS*QTLVAIFLYLA
Trigger: GGCTAGATACAAAAAGATCGCAACAAGCGTTTGCAAGGATGTGGAGAAATTGGAGCCCTCACACACTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp ACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGATAGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 4 (lower is better)
Translates to: TAAPANQPSMQNAQAHRIACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...TATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR TCA 90 bp ACATATGCGTTCAATTCTCCTGGGTATGAAACTGCTGGGTCAAATGGTAACACCCACACACCAAGGAACTaGAAATACCACCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TYAFNSPGYETAGSNGNTHTPRN*KYHQQP
Trigger: GGGCTGCTGGTGGTATTTTCAGTTCCTTGGTGTGTG...GGTGTTACCATTTGACCCAGCAGTTTCATACCCAGGAGAATTGAACGCATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp TTAAATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGGGAGGACACAGGTaGAGGCAGAGATGGGGCGAA +
Preference number: 4 (lower is better)
Translates to: LNSLKRFHTKRAPRHLSAQGGHR*RQRWGE
Trigger: TTCGCCCCATCTCTGCCTTCACCTGTGTCCTCCCTG...CGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR GCA 90 bp TTAAATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGACCTGCCAGCCGTTGTaGAGGTGCGGGAGCATGTAC +
Preference number: 4 (lower is better)
Translates to: LNSLKRFHTKRAPRHLSATCQPL*RCGSMY
Trigger: GTACATGCTCCCGCACCTGCACAACGGCTGGCAGGT...CGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR GCA 90 bp TTAAATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCCGGCAGGCACCACGTaGTTCTGCGTCCACATCTGT +
Preference number: 4 (lower is better)
Translates to: LNSLKRFHTKRAPRHLSAPAGTT*FCVHIC
Trigger: ACAGATGTGGACGCAGAAGCACGTGGTGCCTGCCGG...CGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCAAGTCAATCATGATGTaGTTGTTCCGAGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGKSIMM*LFRVGG
Trigger: GCCTCCTACTCGGAACAAGCACATCATGATTGACTT...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
CDS-3UTR GCA 90 bp AACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGAAGTCAATCATGATGTaGTTGTTCCTTCTCGGCGAT +
Preference number: 4 (lower is better)
Translates to: NVSIQKGLHDIYPRRLRAKSIMM*LFLLGD
Trigger: ATCGCCGAGAAGGAACAAGCACATCATGATTGACTT...CGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588162.1
CDS-3UTR GCA 90 bp TTAAATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGGTGCAATCAGCTCACTaGAGCCTCGACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LNSLKRFHTKRAPRHLSAVQSAH*SLDLPG
Trigger: GCCTGGGAGGTCGAGGCTGCAGTGAGCTGATTGCAC...CGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592837.1
CDS-3UTR GCA 90 bp AGGCGACTGGATCATGGGATGAATTTCTCATCAATGGTTGAGCGTCATCCTCTTCTCCCCAGAAGCAAATaGCAGTACCACACTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RRLDHGMNFSSMVERHPLLPRSK*QYHTSC
Trigger: ACAGGAAGTGTGGTACTGGCATTTGCTTCTGGGGAG...AAGAGGATGACGCTCAACCATTGATGAGAAATTCATCCCATGATCCAGTCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR GCA 90 bp AGGCGACTGGATCATGGGATGAATTTCTCATCAATGGTTGAGCGTCATCCTCTTTTCCCCTTTGCCTTCTaGCATGATTGGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RRLDHGMNFSSMVERHPLFPFAF*HDWKVL
Trigger: CAGGACCTTCCAATCATGGCAGAAGGCAAAGGGGAA...AAGAGGATGACGCTCAACCATTGATGAGAAATTCATCCCATGATCCAGTCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR CCA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTESSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CCA 90 bp CTATTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LFIKFPENKQVGLLLSPRSSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...ACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269601.10
ENST00000585474.5
ENST00000588162.1
CDS-3UTR CCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGCTCAGTAGCGGTACTTaGTGGAGTAGTCCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQLSSGT*WSSPWG
Trigger: CCCCCAAGGACTACTCCACCAAGTACCGCTACTGAG...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR TCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGCCGCCTGCAAAGCTGTaGGAGCACACATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQPPAKL*EHTSLL
Trigger: TAACAGAGATGTGTGCTCTCACAGCTTTGCAGGCGG...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR TCA 90 bp TCCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTTATCTAAGAGCATCTTGCTaGGCTGTGCTCGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: SRQNSEQGKEESPLSAIYLRASC*AVLGCD
Trigger: ATCACATCCGAGCACAGCTCAGCAAGATGCTCTTAG...ATAAATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR GCA 90 bp CAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTCCAAACCAACCCAGTATaGAAAACGCACAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: QPSMQNAQAHRINTFVLLQTNPV*KTHRLT
Trigger: TGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTG...GAGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR GCA 90 bp AGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCTTTTCTGTTTATGCCTaGTCGGCTTATGTAAGCACA +
Preference number: 4 (lower is better)
Translates to: RQRWGEVSTHQGTENTTSFSVYA*SAYVST
Trigger: TGTGCTTACATAAGCCGAGCAGGCATAAACAGAAAA...GCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACCACCCGATGTTTATaGCACCACCTTCTCGGCGAT +
Preference number: 4 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQTTRCL*HHLLGD
Trigger: ATCGCCGAGAAGGTGGTGGCATAAACATCGGGTGGT...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS-3UTR CCA 90 bp AGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGCCTTTGGATTCTGTCATaGATTGAATTGTGTAACCGC +
Preference number: 4 (lower is better)
Translates to: RQRWGEVSTHQGTENTTSLWILS*IELCNR
Trigger: GCGGTTACACAATTCAATCCATGACAGAATCCAAAG...GCTGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR TCA 90 bp AACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 4 (lower is better)
Translates to: NVSIQKGLHDIYPRRLRAACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...CGCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000588162.1
ENST00000592957.1
CDS-3UTR TCA 90 bp TTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACATTTTGGCTTCTGTGTCCATGTTTAACTTTTTaGCGACCTGCCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LTVHLLMDTWVSTFWLLCPCLTF*RPACLC
Trigger: ACACAGGCAGGCAGGTCGTCAAAAAGTTAAACATGG...ACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR GCA 90 bp CCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTTATTCATCTTGCTGAGCTGTaGTCGGATGTGATGAGACAA +
Preference number: 4 (lower is better)
Translates to: PDRTRNKVRKSPHYLPFIHLAEL*SDVMRQ
Trigger: TTGTCTCATCACATCCGAGCACAGCTCAGCAAGATG...AATAAATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR TCA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 4 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000588162.1
ENST00000592957.1
CDS-3UTR GCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGGCTCCTCTCACCACGTaGTTGTTTATTTCGGTGAGT +
Preference number: 4 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQAPLTT*LFISVS
Trigger: ACTCACCGAAATAAACAAGCACGTGGTGAGAGGAGC...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269601.10
ENST00000585474.5
ENST00000588162.1
CDS-3UTR GCA 90 bp CCAACCCAGTATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTATTTCTCCACATCCTTaGAAACGCTTGTTGCGATCT +
Preference number: 4 (lower is better)
Translates to: PTQYAKRTGSQDKHLRFTISPHP*KRLLRS
Trigger: AGATCGCAACAAGCGTTTGCAAGGATGTGGAGAAAT...AGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATACTGGGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TTAAATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGAGTAGCGGTACTTGGTaGAGTAGTCCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LNSLKRFHTKRAPRHLSASSGTW*SSPWGT
Trigger: TGTCCCCCAAGGACTACTCCACCAAGTACCGCTACT...CGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTTGGGTTTCCACATTTTaGCTTCTGTGTACGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FIKFPENKQVGLLLSPRAWVSTF*LLCTSF
Trigger: GAAACTCGTACACAGAAGCCAAAATGTGGAAACCCA...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CAA 72 bp TACACGTTCTCCCTAGCCCCTCATTCCGATACGCTGTaGCACTCTCCTACTTTATACATAGAAAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: YTFSLAPHSDTL*HSPTLYIEKSA
Trigger: TGCTGATTTTTCTATGTATAAAGTAGGAGAGTGCAACAGCGTATCGGAATGAGGGGCTAGGGAGAACGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTCTTTGGATTCTGTCATaGATTGAATTGTGTAACCGC +
Preference number: 4 (lower is better)
Translates to: FIKFPENKQVGLLLSPRALWILS*IELCNR
Trigger: GCGGTTACACAATTCAATCCATGACAGAATCCAAAG...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR TCA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 4 (lower is better)
Translates to: FIKFPENKQVGLLLSPRAACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269601.10
ENST00000585474.5
ENST00000588162.1
CDS-3UTR GCA 90 bp TTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACATTTTGGCTTCTGTGTATTCCGATACGCTGTTaGACTCTCCTACTTTATACA +
Preference number: 4 (lower is better)
Translates to: LTVHLLMDTWVSTFWLLCIPIRC*TLLLYT
Trigger: TGTATAAAGTAGGAGAGTGCAACAGCGTATCGGAAT...ACACAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
3UTR CAA 72 bp TTCTATGGATGGACATTTTGTTTAACCGTTCATCTGTaGATGGACACGTGGGTTTCCACATTTTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FYGWTFCLTVHL*MDTWVSTFWLL
Trigger: CAGAAGCCAAAATGTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR TCA 90 bp AGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGCTTGTTTATTTCGGTaGGTTAAGACCATGTTATCA +
Preference number: 4 (lower is better)
Translates to: SLKRFHTKRAPRHLSAQTACLFR*VKTMLS
Trigger: TGATAACATGGTCTTAACTCACCGAAATAAACAAGC...AGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000588162.1
ENST00000592957.1
CDS-3UTR TCA 90 bp TCAAAGATTCACACTGATTGCCTGGTGATACAAACGATTTTGGGACATGACTGTAACGATTTTGGGACATaGCTGTACAACCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: SKIHTDCLVIQTILGHDCNDFGT*LYNQLP
Trigger: AGGAAGTTGGTTGTACAGTCATGTCCCAAAATCGTT...ACAGTCATGTCCCAAAATCGTTTGTATCACCAGGCAATCAGTGTGAATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591711.5
CDS-3UTR GCA 90 bp AATCTATTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACACTTTTTCTGTTTATaGCTGCTCGGCTTATGTAAG +
Preference number: 4 (lower is better)
Translates to: NLFIKFPENKQVGLLLSPHFFCL*LLGLCK
Trigger: CTTACATAAGCCGAGCAGGCATAAACAGAAAAAGTG...TGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAATAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp AATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACCAGAGTAAACCTTTaGATTCTGTCATGGATTGAA +
Preference number: 4 (lower is better)
Translates to: NSLKRFHTKRAPRHLSAQTRVNL*ILSWIE
Trigger: TTCAATCCATGACAGAATCCAAAGGTTTACTCTGGT...CTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp TATGCAAAACGCACAGGCTCACAGGATAAACACCTTCGTTTTACTCCAAGGGTAAGAAAAATCAGCACTTaGGAGATTAAACTGCAGATT +
Preference number: 4 (lower is better)
Translates to: YAKRTGSQDKHLRFTPRVRKIST*EIKLQI
Trigger: AATCTGCAGTTTAATCTCCCAAGTGCTGATTTTTCT...TACCCTTGGAGTAAAACGAAGGTGTTTATCCTGTGAGCCTGTGCGTTTTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CCA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGAACCAAGAATTTGTGTaGATCAGGGCAATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTENQEFV*IRAIFV
Trigger: AACAAAAATTGCCCTGATCCACACAAATTCTTGGTT...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592837.1
CDS-3UTR GCA 90 bp TCAAAGATTCACACTGATTGCCTGGTGATACAAACGATTTTGGGACATGACTGTAAGATTCACACTGATTaGCTGGTGATACAAACGATT +
Preference number: 4 (lower is better)
Translates to: SKIHTDCLVIQTILGHDCKIHTD*LVIQTI
Trigger: AATCGTTTGTATCACCAGGCAATCAGTGTGAATCTT...ACAGTCATGTCCCAAAATCGTTTGTATCACCAGGCAATCAGTGTGAATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591711.5
CDS-3UTR CCA 90 bp AATCTATTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCAACCAGAGTAAACCTTTaGATTCTGTCATGGATTGAA +
Preference number: 4 (lower is better)
Translates to: NLFIKFPENKQVGLLLSPTRVNL*ILSWIE
Trigger: TTCAATCCATGACAGAATCCAAAGGTTTACTCTGGT...TGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAATAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CCA 90 bp TTAAATAGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGTCCACTTTTGGAGAATaGTCTAATGCTCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: LNSLKRFHTKRAPRHLSASTFGE*SNAHVA
Trigger: AGCTACATGAGCATTAGACCATTCTCCAAAAGTGGA...CGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCTATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
3UTR CAA 72 bp AAGATTCACACTGATTGCCTGGTGATACAAACGATTTaGGGACATGACTGTACAACCAACTTCCTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: KIHTDCLVIQTI*GHDCTTNFLQN
Trigger: ATTTTGAAGGAAGTTGGTTGTACAGTCATGTCCCAAAATCGTTTGTATCACCAGGCAATCAGTGTGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591711.5
CDS-3UTR CAA 90 bp AGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTACAACCAGGCCGCGGCCTTaGCGGGCCCCGCGGTACACC +
Preference number: 5 (lower is better)
Translates to: SSPWGTPPGRGLCGPRGTTRPRP*RAPRYT
Trigger: GGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT...TGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CAA 90 bp GCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATCTCACCAGGCCGCGGCCTTaGCGGGCCCCGCGGTACACC +
Preference number: 5 (lower is better)
Translates to: AAAFAGPAVHRLDDVHHLTRPRP*RAPRYT
Trigger: GGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT...GAGATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355491.5
ENST00000585769.5
ENST00000588162.1
CDS-3UTR CAA 90 bp TGCTGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCAACCAGGCCGCGGCCTTaGCGGGCCCCGCGGTACACC +
Preference number: 5 (lower is better)
Translates to: CCHRSPSKPTQYAKRTGSTRPRP*RAPRYT
Trigger: GGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT...TGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CAA 90 bp TGGAGTAGTCCTTGGGGGACACCACCAGGCCGCGGCCTTTGCGGGCCCCGCGGTTCAATCATGATGTGCTaGTTCCGAGTAGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: WSSPWGTPPGRGLCGPRGSIMMC*FRVGGS
Trigger: GGAGCCTCCTACTCGGAACAAGCACATCATGATTGA...ACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCAAGGACTACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
CDS CCA 90 bp CTGTACAGGACCTCGTCCATCTTCATGCACGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACCACGCGGTCCTCCTCCGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: LYRTSSIFMHVGSQS*PKRMTTTRSSSERM
Trigger: CATCCTCTCGGAGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACGACTGGGATCCTACGTGCATGAAGATGGACGAGGTCCTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585769.5
ENST00000586295.1
ENST00000586825.1
ENST00000588162.1
ENST00000591711.5
CDS-3UTR CAA 90 bp CAGGCCGCGGCCTTTGCGGGCCCCGCGGTACACCGTCTCGATGATGTCCACCATTCAATCATGATGTGCTaGTTCCGAGTAGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QAAAFAGPAVHRLDDVHHSIMMC*FRVGGS
Trigger: GGAGCCTCCTACTCGGAACAAGCACATCATGATTGA...ATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355491.5
ENST00000585769.5
CDS-3UTR CAA 90 bp ACCTGCCTGCCTGTGTTACCACTTTGCCACCAGCAGTGTGTGAGGGCTCCAATTCAGGGTCTCACCAGGTaGCCCAGGCTGGTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: TCLPVLPLCHQQCVRAPIQGLTR*PRLVVN
Trigger: GTTCACGACCAGCCTGGGCAACCTGGTGAGACCCTG...AATTGGAGCCCTCACACACTGCTGGTGGCAAAGTGGTAACACAGGCAGGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS TCA 90 bp CAGCTTTCACCGTGCGACGTGCCTGTTCCCCTTTGCCTTCTGCCATaGTTGGAAGGTCCTGAGGCCTCCCCAGAAGCAAATGCCAGTACC +
Preference number: 5 (lower is better)
Translates to: QLSPCDVPVPLCLLP*LEGPEASPEANAST
Trigger: GGTACTGGCATTTGCTTCTGGGGAGGCCTCAGGACCTTCCAATCATGGCAGAAGGCAAAGGGGAACAGGCACGTCGCACGGTGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS GCA 90 bp TGTTCCAAGTGTGTGACACTCCGCCCCAGCTTTCACCGTGCGACGTaGCTGTTCCCCTTTGCCTTCTGCCATGATTGGAAGGTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: CSKCVTLRPSFHRAT*LFPFAFCHDWKVLR
Trigger: CCTCAGGACCTTCCAATCATGGCAGAAGGCAAAGGGGAACAGGCACGTCGCACGGTGAAAGCTGGGGCGGAGTGTCACACACTTGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR CAA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGACCAGGCCGCGGCCTTaGCGGGCCCCGCGGTACACC +
Preference number: 5 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTETRPRP*RAPRYT
Trigger: GGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585474.5
ENST00000585769.5
ENST00000588162.1
ENST00000592837.1
ENST00000592957.1
CDS-3UTR CAA 90 bp CCTGCCCAAGGTCACTTGGTGGGGCAGAGCCTGGGTCTGAGGTCAGAGGGCCCAAATTTCTCCACATCCTaGCAAACGCTTGTTGCGATC +
Preference number: 5 (lower is better)
Translates to: PAQGHLVGQSLGLRSEGPNFSTS*QTLVAI
Trigger: GATCGCAACAAGCGTTTGCAAGGATGTGGAGAAATT...TGGGCCCTCTGACCTCAGACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS CCA 90 bp TTTCACCGTGCGACGTGCCTGTTCCCCTTTGCCTTCTGCCATGATTaGAAGGTCCTGAGGCCTCCCCAGAAGCAAATGCCAGTACCACAC +
Preference number: 5 (lower is better)
Translates to: FHRATCLFPFAFCHD*KVLRPPQKQMPVPH
Trigger: GTGTGGTACTGGCATTTGCTTCTGGGGAGGCCTCAGGACCTTCCAATCATGGCAGAAGGCAAAGGGGAACAGGCACGTCGCACGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS-3UTR CAA 90 bp AATCTATTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCAACCAGGCCGCGGCCTTaGCGGGCCCCGCGGTACACC +
Preference number: 5 (lower is better)
Translates to: NLFIKFPENKQVGLLLSPTRPRP*RAPRYT
Trigger: GGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGT...TGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAATAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269601.10
ENST00000585474.5
ENST00000588162.1
CDS CCA 90 bp GCAAAATTTTTAACGCCTCTTTCCAGTGGCTCCAGCCTCCAGTGGTaGGTATCCTCCTTCCAAGGTCAGGACTGGCGTTGTCTTCACCCC +
Preference number: 5 (lower is better)
Translates to: AKFLTPLSSGSSLQW*VSSFQGQDWRCLHP
Trigger: GGGGTGAAGACAACGCCAGTCCTGACCTTGGAAGGAGGATACCCACCACTGGAGGCTGGAGCCACTGGAAAGAGGCGTTAAAAATTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS CCA 90 bp CCGATTCTCTGGTATCGCCAGTGGCAGCCTCTCATCTGGAAGACATaGAAAAGGGGACACCATAGGGACTCCTCTCATGATCAACCCGTT +
Preference number: 5 (lower is better)
Translates to: PILWYRQWQPLIWKT*KRGHHRDSSHDQPV
Trigger: AACGGGTTGATCATGAGAGGAGTCCCTATGGTGTCCCCTTTTCCATGTCTTCCAGATGAGAGGCTGCCACTGGCGATACCAGAGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS-3UTR CAA 90 bp GAGCATCTTGCTGAGCTGTGCTCGGATGTGATGAGACAAAGGCCCTCACATCTCCTAGCTAAGAGCATCTaGCTGAGCTGTGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: EHLAELCSDVMRQRPSHLLAKSI*LSCARM
Trigger: CATCCGAGCACAGCTCAGCAAGATGCTCTTAGCTAG...GAGATGTGAGGGCCTTTGTCTCATCACATCCGAGCACAGCTCAGCAAGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585769.5
ENST00000586825.1
CDS-3UTR CAA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCAGGTCAGGACTGGCGTaGTCTTCACCCCGCTTACAC +
Preference number: 5 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGRSGLA*SSPRLH
Trigger: GTGTAAGCGGGGTGAAGACAACGCCAGTCCTGACCT...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS CCA 90 bp ACTGCAAAATTTTTAACGCCTCTTTCCAGTGGCTCCAGCCTCCAGTaGTGGGTATCCTCCTTCCAAGGTCAGGACTGGCGTTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: TAKFLTPLSSGSSLQ*WVSSFQGQDWRCLH
Trigger: GTGAAGACAACGCCAGTCCTGACCTTGGAAGGAGGATACCCACCACTGGAGGCTGGAGCCACTGGAAAGAGGCGTTAAAAATTTTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS-3UTR CAA 90 bp TGTCACCGCAGCCCCAGCAAACCAACCCAGTATGCAAAACGCACAGGCTCACAGGTGGGTTTCCACATTTaGGCTTCTGTGTACGAGTTT +
Preference number: 5 (lower is better)
Translates to: CHRSPSKPTQYAKRTGSQVGFHI*ASVYEF
Trigger: AAACTCGTACACAGAAGCCAAAATGTGGAAACCCAC...CTGTGAGCCTGTGCGTTTTGCATACTGGGTTGGTTTGCTGGGGCTGCGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS CCA 90 bp GTTCTGTTAAATAGCATTCCTTCAGTGTCCCGGAGGGTCGTGGATTaGAGGAAAATCCAGCAATGCTGGCGTTGTCTTCACCCCGCTTAC +
Preference number: 5 (lower is better)
Translates to: VLLNSIPSVSRRVVD*RKIQQCWRCLHPAY
Trigger: GTAAGCGGGGTGAAGACAACGCCAGCATTGCTGGATTTTCCTCCAATCCACGACCCTCCGGGACACTGAAGGAATGCTATTTAACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS-3UTR CAA 90 bp TTTCCACAACAGCAATCAATCTCCCGACAGCAGCGAGCCCTGTGCACCACTCCTCGTCTCACTGTGGTTTaGATTTGCACCTTCCTTAAC +
Preference number: 5 (lower is better)
Translates to: FPQQQSISRQQRALCTTPRLTVV*ICTFLN
Trigger: GTTAAGGAAGGTGCAAATCAAAACCACAGTGAGACG...AGGAGTGGTGCACAGGGCTCGCTGCTGTCGGGAGATTGATTGCTGTTGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CAA 90 bp GGCACTTTTTCTGTTTATGCCTGCTCGGCTTATGTAAGCACATTTTCATTACATCCTGCCCAAGGTCACTaGGTGGGGCAGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GTFSVYACSAYVSTFSLHPAQGH*VGQSLG
Trigger: ACCCAGGCTCTGCCCCACCAAGTGACCTTGGGCAGG...ATGTAATGAAAATGTGCTTACATAAGCCGAGCAGGCATAAACAGAAAAAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS CCA 90 bp TCTATGACCCGGGTCATTCAGACCTTTATCAGCTGGTCCACATACTaGTCTCAGAAGCTAAAGCTAAGTGGCTGGAAAAGGCACAGTGGT +
Preference number: 5 (lower is better)
Translates to: SMTRVIQTFISWSTY*SQKLKLSGWKRHSG
Trigger: ACCACTGTGCCTTTTCCAGCCACTTAGCTTTAGCTTCTGAGACCAGTATGTGGACCAGCTGATAAAGGTCTGAATGACCCGGGTCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS-3UTR CAA 90 bp AAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGCATTTTTAACCTGGCGTaGTCTTCACCCCGCTTACAC +
Preference number: 5 (lower is better)
Translates to: KRFHTKRAPRHLSAQTEGIFNLA*SSPRLH
Trigger: GTGTAAGCGGGGTGAAGACAACGCCAGGTTAAAAAT...GCCCTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585474.5
CDS CCA 90 bp CTTTATCAGCTGGTCCACATACTGGTCTCAGAAGCTAAAGCTAAGTaGCTGGAAAAGGCACAGTGGTCAGACATTGTAGCAGACCTGATC +
Preference number: 5 (lower is better)
Translates to: LYQLVHILVSEAKAK*LEKAQWSDIVADLI
Trigger: GATCAGGTCTGCTACAATGTCTGACCACTGTGCCTTTTCCAGCCACTTAGCTTTAGCTTCTGAGACCAGTATGTGGACCAGCTGATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS-3UTR CAA 90 bp TCCAGACAGAACTCGGAACAAGGTAAGGAAGAGTCCCCATTATCTGCCATTTATCTAGCTAAGAGCATCTaGCTGAGCTGTGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: SRQNSEQGKEESPLSAIYLAKSI*LSCARM
Trigger: CATCCGAGCACAGCTCAGCAAGATGCTCTTAGCTAG...ATAAATGGCAGATAATGGGGACTCTTCCTTACCTTGTTCCGAGTTCTGTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586825.1
CDS-3UTR CAA 90 bp TTCATTAAGTTTCCTGAGAACAAACAAGTAGGCCTGCTCCTCTCACCACGTGCTTCAATCATGATGTGCTaGTTCCTTCTCGGCGATGCT +
Preference number: 5 (lower is better)
Translates to: FIKFPENKQVGLLLSPRASIMMC*FLLGDA
Trigger: AGCATCGCCGAGAAGGAACAAGCACATCATGATTGA...AGCACGTGGTGAGAGGAGCAGGCCTACTTGTTTGTTCTCAGGAAACTTAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588162.1
CDS-3UTR CAA 90 bp GAAGGCAGAGATGGGGCGAAGTATCCACACACCAAGGAACTGAAAATACCACCAGGATTCTGTCATGGATaGAATTGTGTAACCGCAAAA +
Preference number: 5 (lower is better)
Translates to: EGRDGAKYPHTKELKIPPGFCHG*NCVTAK
Trigger: TTTTGCGGTTACACAATTCAATCCATGACAGAATCC...TGGTGGTATTTTCAGTTCCTTGGTGTGTGGATACTTCGCCCCATCTCTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CAA 90 bp TGGATGGACATTTTGTTTAACCGTTCATCTGTTGATGGACACGTGGGTTTCCACCATTCCGATACGCTGTaGCACTCTCCTACTTTATAC +
Preference number: 5 (lower is better)
Translates to: WMDILFNRSSVDGHVGFHHSDTL*HSPTLY
Trigger: GTATAAAGTAGGAGAGTGCAACAGCGTATCGGAATG...GTGGAAACCCACGTGTCCATCAACAGATGAACGGTTAAACAAAATGTCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269601.10
CDS-3UTR CAA 90 bp TTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTGAGGGATTCTGTCATGGATaGAATTGTGTAACCGCAAAA +
Preference number: 5 (lower is better)
Translates to: LKRFHTKRAPRHLSAQTEGFCHG*NCVTAK
Trigger: TTTTGCGGTTACACAATTCAATCCATGACAGAATCC...CTCAGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269601.10
ENST00000585474.5
CDS-3UTR CAA 90 bp AGCTTAAAACGTTTCCATACAAAAAGGGCTCCACGACATTTATCCGCGCAGACTAACAAAACCAAGAATTaGTGTGGATCAGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: SLKRFHTKRAPRHLSAQTNKTKN*CGSGQF
Trigger: AAATTGCCCTGATCCACACAAATTCTTGGTTTTGTT...AGTCTGCGCGGATAAATGTCGTGGAGCCCTTTTTGTATGGAAACGTTTTAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592837.1
CDS-3UTR CAA 90 bp TCAAAGATTCACACTGATTGCCTGGTGATACAAACGATTTTGGGACATGACTGTGTGATACAAACGATTTaGGGACATGACTGTACAACC +
Preference number: 5 (lower is better)
Translates to: SKIHTDCLVIQTILGHDCVIQTI*GHDCTT
Trigger: GGTTGTACAGTCATGTCCCAAAATCGTTTGTATCAC...ACAGTCATGTCCCAAAATCGTTTGTATCACCAGGCAATCAGTGTGAATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591711.5
CDS CCA 72 bp GCCAGCCGTTGTGCAGGTGCGGGAGCATGTACGACATaGCGGCCCGCGCGCTCGCCGCCGCCCAAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: ASRCAGAGACTT*RPARSPPPKAG
Trigger: CCCCGCCTTGGGCGGCGGCGAGCGCGCGGGCCGCCATGTCGTACATGCTCCCGCACCTGCACAACGGCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585769.5
ENST00000586295.1
ENST00000586825.1
ENST00000588162.1
ENST00000591711.5
CDS GCA 72 bp TCCGGTCCCGCCCGCACACGCAAACTCCGCTGGGACTaGCACCCGGCAGAACGTCTGGGCGCGCACGCACCG +
Preference number: 6 (lower is better)
Translates to: SGPARTRKLRWD*HPAERLGAHAP
Trigger: CGGTGCGTGCGCGCCCAGACGTTCTGCCGGGTGGCAGTCCCAGCGGAGTTTGCGTGTGCGGGCGGGACCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS CCA 72 bp ACGAAATCCGGTCCCGCCCGCACACGCAAACTCCGCTaGGACTGCCACCCGGCAGAACGTCTGGGCGCGCAC +
Preference number: 6 (lower is better)
Translates to: TKSGPARTRKLR*DCHPAERLGAH
Trigger: GTGCGCGCCCAGACGTTCTGCCGGGTGGCAGTCCCAGCGGAGTTTGCGTGTGCGGGCGGGACCGGATTTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585769.5
CDS CCA 72 bp ACCTCGTCCATCTTCATGCACGTAGGATCCCAGTCGTaGCCGAAGCGGATGACGACCACGCGGTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TSSIFMHVGSQS*PKRMTTTRSSS
Trigger: GGAGGAGGACCGCGTGGTCGTCATCCGCTTCGGCCACGACTGGGATCCTACGTGCATGAAGATGGACGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269601.10
ENST00000355491.5
ENST00000585769.5
ENST00000586295.1
ENST00000586825.1
ENST00000588162.1
ENST00000591711.5
CDS CCA 72 bp CTCCAGTGGTGGGTATCCTCCTTCCAAGGTCAGGACTaGCGTTGTCTTCACCCCGCTTACACGCCGCTCGCT +
Preference number: 6 (lower is better)
Translates to: LQWWVSSFQGQD*RCLHPAYTPLA
Trigger: AGCGAGCGGCGTGTAAGCGGGGTGAAGACAACGCCAGTCCTGACCTTGGAAGGAGGATACCCACCACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS CCA 72 bp CGGAGGGTCGTGGATTGGAGGAAAATCCAGCAATGCTaGCGTTGTCTTCACCCCGCTTACACGCCGCTCGCT +
Preference number: 6 (lower is better)
Translates to: RRVVDWRKIQQC*RCLHPAYTPLA
Trigger: AGCGAGCGGCGTGTAAGCGGGGTGAAGACAACGCCAGCATTGCTGGATTTTCCTCCAATCCACGACCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS TCA 72 bp CCGTGCGACGTGCCTGTTCCCCTTTGCCTTCTGCCATaGTTGGAAGGTCCTGAGGCCTCCCCAGAAGCAAAT +
Preference number: 6 (lower is better)
Translates to: PCDVPVPLCLLP*LEGPEASPEAN
Trigger: ATTTGCTTCTGGGGAGGCCTCAGGACCTTCCAATCATGGCAGAAGGCAAAGGGGAACAGGCACGTCGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS GCA 72 bp TTTCACCGTGCGACGTGCCTGTTCCCCTTTGCCTTCTaGCATGATTGGAAGGTCCTGAGGCCTCCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: FHRATCLFPFAF*HDWKVLRPPQK
Trigger: CTTCTGGGGAGGCCTCAGGACCTTCCAATCATGGCAGAAGGCAAAGGGGAACAGGCACGTCGCACGGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS GCA 72 bp TGTGTGACACTCCGCCCCAGCTTTCACCGTGCGACGTaGCTGTTCCCCTTTGCCTTCTGCCATGATTGGAAG +
Preference number: 6 (lower is better)
Translates to: CVTLRPSFHRAT*LFPFAFCHDWK
Trigger: CTTCCAATCATGGCAGAAGGCAAAGGGGAACAGGCACGTCGCACGGTGAAAGCTGGGGCGGAGTGTCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586295.1
CDS CCA 72 bp CCGATTCTCTGGTATCGCCAGTGGCAGCCTCTCATCTaGAAGACATGGAAAAGGGGACACCATAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: PILWYRQWQPLI*KTWKRGHHRDS
Trigger: GGAGTCCCTATGGTGTCCCCTTTTCCATGTCTTCCAGATGAGAGGCTGCCACTGGCGATACCAGAGAATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CCA 72 bp TGGTATCGCCAGTGGCAGCCTCTCATCTGGAAGACATaGAAAAGGGGACACCATAGGGACTCCTCTCATGAT +
Preference number: 6 (lower is better)
Translates to: WYRQWQPLIWKT*KRGHHRDSSHD
Trigger: ATCATGAGAGGAGTCCCTATGGTGTCCCCTTTTCCATGTCTTCCAGATGAGAGGCTGCCACTGGCGATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CCA 72 bp AATAGCATTCCTTCAGTGTCCCGGAGGGTCGTGGATTaGAGGAAAATCCAGCAATGCTGGCGTTGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: NSIPSVSRRVVD*RKIQQCWRCLH
Trigger: GTGAAGACAACGCCAGCATTGCTGGATTTTCCTCCAATCCACGACCCTCCGGGACACTGAAGGAATGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS TCA 72 bp AACCCCTGTGATTGTCTGTCAACCCTGGTTAATGGCTaGGTTGCGAGGCATAAAGAATTTCCTGCCTCCCGT +
Preference number: 6 (lower is better)
Translates to: NPCDCLSTLVNG*VARHKEFPASR
Trigger: ACGGGAGGCAGGAAATTCTTTATGCCTCGCAACTCAGCCATTAACCAGGGTTGACAGACAATCACAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CCA 72 bp CTGGTCCACATACTGGTCTCAGAAGCTAAAGCTAAGTaGCTGGAAAAGGCACAGTGGTCAGACATTGTAGCA +
Preference number: 6 (lower is better)
Translates to: LVHILVSEAKAK*LEKAQWSDIVA
Trigger: TGCTACAATGTCTGACCACTGTGCCTTTTCCAGCCACTTAGCTTTAGCTTCTGAGACCAGTATGTGGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CCA 72 bp CGGGTCATTCAGACCTTTATCAGCTGGTCCACATACTaGTCTCAGAAGCTAAAGCTAAGTGGCTGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: RVIQTFISWSTY*SQKLKLSGWKR
Trigger: CCTTTTCCAGCCACTTAGCTTTAGCTTCTGAGACCAGTATGTGGACCAGCTGATAAAGGTCTGAATGACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CCA 72 bp TCAGAAGCTAAAGCTAAGTGGCTGGAAAAGGCACAGTaGTCAGACATTGTAGCAGACCTGATCTCTAAAGGC +
Preference number: 6 (lower is better)
Translates to: SEAKAKWLEKAQ*SDIVADLISKG
Trigger: GCCTTTAGAGATCAGGTCTGCTACAATGTCTGACCACTGTGCCTTTTCCAGCCACTTAGCTTTAGCTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CCA 72 bp ATAAATAACTGCAAAATTTTTAACGCCTCTTTCCAGTaGCTCCAGCCTCCAGTGGTGGGTATCCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: INNCKIFNASFQ*LQPPVVGILLP
Trigger: TGGAAGGAGGATACCCACCACTGGAGGCTGGAGCCACTGGAAAGAGGCGTTAAAAATTTTGCAGTTATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592957.1
CDS CCA 72 bp GAATCTATGACCCGGGTCATTCAGACCTTTATCAGCTaGTCCACATACTGGTCTCAGAAGCTAAAGCTAAGT +
Preference number: 6 (lower is better)
Translates to: ESMTRVIQTFIS*STYWSQKLKLS
Trigger: ACTTAGCTTTAGCTTCTGAGACCAGTATGTGGACCAGCTGATAAAGGTCTGAATGACCCGGGTCATAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CAA 90 bp GAGTTGCGAGGCATAAAGAATTTCCTGCCTCCCGTAAAGATCCAATaGGGTTTGCTCAAGAGTTTGAGCTCATTATCAGAATCTATGACC +
Preference number: 6 (lower is better)
Translates to: ELRGIKNFLPPVKIQ*GLLKSLSSLSESMT
Trigger: GGTCATAGATTCTGATAATGAGCTCAAACTCTTGAGCAAACCCAATTGGATCTTTACGGGAGGCAGGAAATTCTTTATGCCTCGCAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589926.1
CDS CAA 72 bp GGCATAAAGAATTTCCTGCCTCCCGTAAAGATCCAATaGGGTTTGCTCAAGAGTTTGAGCTCATTATCAGAA +
Preference number: 6 (lower is better)
Translates to: GIKNFLPPVKIQ*GLLKSLSSLSE
Trigger: TTCTGATAATGAGCTCAAACTCTTGAGCAAACCCAATTGGATCTTTACGGGAGGCAGGAAATTCTTTATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589926.1