Pregenerated sensors for TXNDC9 (Homo sapiens)
Ensembl gene IDs: ENSG00000115514Ensembl transcript IDs: ENST00000264255.8, ENST00000434323.5, ENST00000465183.1, ENST00000477337.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACCCTTTAAATAAGGCAGTATGTTCACAAATCAAAATAGCTTTCTaGTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: DPLNKAVCSQIKIAF*WHQLIQHQHAVSRM Trigger: CATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCTATTTTGATTTGTGAACATACTGCCTTATTTAAAGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| 3UTR-3UTR GCA 90 bp | AATAGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATTTACAAGTGCAGTATTaGGCTAGTAAATGTTACTTG | + |
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Preference number: 2 (lower is better) Translates to: NSFLLASVDSTSTCSVQNLQVQY*ASKCYL Trigger: CAAGTAACATTTACTAGCGCAATACTGCACTTGTAA...ATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| 3UTR GCA 72 bp | AATAAGGCAGTATGTTCACAAATCAAAATAGCTTTCTaGTGGCATCAGTTGATTCAACATCAACATGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: NKAVCSQIKIAF*WHQLIQHQHAV Trigger: CACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCTATTTTGATTTGTGAACATACTGCCTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR GCA 90 bp | AATAGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATCTCCGGCTTTTGCCTTaGAGTAGCTGCCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSFLLASVDSTSTCSVQNLRLLP*SSCRRL Trigger: CAGCCGCCGGCAGCTACTGCAAGGCAAAAGCCGGAG...ATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR GCA 90 bp | GATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATATGTAGCTGCCGGCGGCTaGAAACGGGCCGTCACATCC | + |
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Preference number: 4 (lower is better) Translates to: DVCLVFYTRIRSAHMVPYVAAGG*KRAVTS Trigger: GGATGTGACGGCCCGTTTGCAGCCGCCGGCAGCTAC...ATATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR GCA 90 bp | AGATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATACTCCGGCTTTTGCCTTaGAGTAGCTGCCGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RCLSSILHKNQKCTHGAILRLLP*SSCRRL Trigger: CAGCCGCCGGCAGCTACTGCAAGGCAAAAGCCGGAG...TATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR GCA 90 bp | GATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATATTTGCCTTGCAGTAGCTaGCGGCGGCTGCAAACGGGC | + |
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Preference number: 4 (lower is better) Translates to: DVCLVFYTRIRSAHMVPYLPCSS*RRLQTG Trigger: GCCCGTTTGCAGCCGCCGGCAGCTACTGCAAGGCAA...ATATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR CCA 90 bp | GATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATATCATCCGCCTCCTTATTaGCTGCGAACCTCGCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: DVCLVFYTRIRSAHMVPYHPPPY*LRTSRD Trigger: ATCGCGCGAGGTTCGCAGCCAATAAGGAGGCGGATG...ATATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR TCA 90 bp | AGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATGAATCTGCTGGCATCAGTTaGTTCAACATCAACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SFLLASVDSTSTCSVQNESAGIS*FNINMQ Trigger: CTGCATGTTGATGTTGAATCAACTGATGCCAGCAGA...TTCATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR TCA 90 bp | AGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATGAAATGCAGTGTCCAGAATaGATAAGCAGTTCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: SFLLASVDSTSTCSVQNEMQCPE*ISSSLM Trigger: CATTAAAGAACTGCTTATTCATTCTGGACACTGCAT...TTCATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR TCA 90 bp | AGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATGAATTACAGGTATTTTATTaGGCAGAGACAGTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SFLLASVDSTSTCSVQNELQVFY*AETVKF Trigger: GAACTTCACTGTCTCTGCTCAATAAAATACCTGTAA...TTCATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR CCA 90 bp | AGATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATATCAGAAGTGCACACATaGTGCCATATTTGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RCLSSILHKNQKCTHGAISEVHT*CHIWKS Trigger: TGACTTCCAAATATGGCACCATGTGTGCACTTCTGA...TATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR TCA 90 bp | CTGAGTTTTCCTCAACTTAAACATGATGGCCACACAGAAAACAGTAAAGACACTCTAGTATTTTACACCTaGATGTGGAGTCTCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LSFPQLKHDGHTENSKDTLVFYT*MWSLCR Trigger: TCTACAGAGACTCCACATTCAGGTGTAAAATACTAG...AGTGTCTTTACTGTTTTCTGTGTGGCCATCATGTTTAAGTTGAGGAAAACTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR GCA 90 bp | AGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATGAATTACAAGTGCAGTATTaGGCTAGTAAATGTTACTTG | + |
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Preference number: 4 (lower is better) Translates to: SFLLASVDSTSTCSVQNELQVQY*ASKCYL Trigger: CAAGTAACATTTACTAGCGCAATACTGCACTTGTAA...TTCATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR GCA 90 bp | GATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATATCACAAGAATCAGAAGTaGACACATGGTGCCATATTT | + |
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Preference number: 4 (lower is better) Translates to: DVCLVFYTRIRSAHMVPYHKNQK*THGAIF Trigger: AAATATGGCACCATGTGTGCACTTCTGATTCTTGTG...ATATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR GCA 90 bp | AATAGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATATCAAAATAGCTTTCTaGTGGCATCAGTTGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: NSFLLASVDSTSTCSVQNIKIAF*WHQLIQ Trigger: TTGAATCAACTGATGCCAGCAGAAAGCTATTTTGAT...ATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| 3UTR CAA 72 bp | CAATTTCCACATAAACTTCCAGTTACAGGTATTTTATaGAGCAGAGACAGTGAAGTTCCTTATGCTGTTATT | + |
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Preference number: 4 (lower is better) Translates to: QFPHKLPVTGIL*SRDSEVPYAVI Trigger: AATAACAGCATAAGGAACTTCACTGTCTCTGCTCAATAAAATACCTGTAACTGGAAGTTTATGTGGAAATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS GCA 90 bp | GCCAGAGGAAGGGGCGGGCGGTCGGGTGGCGAACAGTTCTGCGCGTaGGCCTCCCGCCCAGCAGCCCGGAACCCAAGGTGTCCGACCCTT | + |
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Preference number: 5 (lower is better) Translates to: ARGRGGRSGGEQFCA*ASRPAARNPRCPTL Trigger: AAGGGTCGGACACCTTGGGTTCCGGGCTGCTGGGCGGGAGGCGCACGCGCAGAACTGTTCGCCACCCGACCGCCCGCCCCTTCCTCTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 90 bp | GCGCGATATCACCTTGGACGCCAGAGGAAGGGGCGGGCGGTCGGGTaGCGAACAGTTCTGCGCGTGCGCCTCCCGCCCAGCAGCCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: ARYHLGRQRKGRAVG*RTVLRVRLPPSSPE Trigger: TTCCGGGCTGCTGGGCGGGAGGCGCACGCGCAGAACTGTTCGCCACCCGACCGCCCGCCCCTTCCTCTGGCGTCCAAGGTGATATCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 90 bp | GTGCGCCTCCCGCCCAGCAGCCCGGAACCCAAGGTGTCCGACCCTTaGTTTCCTCCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VRLPPSSPEPKVSDP*FPPGTRPNWKAAKH Trigger: ATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAGCAAGGGTCGGACACCTTGGGTTCCGGGCTGCTGGGCGGGAGGCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 90 bp | CACATCCGCCTCCTTATTGGCTGCGAACCTCGCGCGATATCACCTTaGACGCCAGAGGAAGGGGCGGGCGGTCGGGTGGCGAACAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: HIRLLIGCEPRAISP*TPEEGAGGRVANSS Trigger: AGAACTGTTCGCCACCCGACCGCCCGCCCCTTCCTCTGGCGTCCAAGGTGATATCGCGCGAGGTTCGCAGCCAATAAGGAGGCGGATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 90 bp | CCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCATTGTGGGAGTTaGAGTTTCTTAGTGCGCAGGCTGTCGTGGCCGGACTTTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PGTRPNWKAAKHCGS*SFLVRRLSWPDFLR Trigger: CCTGAGAAAGTCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 90 bp | GTGGCCGGACTTTCTCAGGAGCGTGCTTCAGTATTCACGGTCCAGTaGGCCAGACTGGAAATGAGACAGCTGTGCTCTCGCTCAGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: VAGLSQERASVFTVQ*ARLEMRQLCSRSAV Trigger: CACGGCTGAGCGAGAGCACAGCTGTCTCATTTCCAGTCTGGCGCACTGGACCGTGAATACTGAAGCACGCTCCTGAGAAAGTCCGGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 90 bp | CTTTCCTCCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCATTGTaGGAGTTGCAGTTTCTTAGTGCGCAGGCTGTCGTGGCCGGACTT | + |
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Preference number: 5 (lower is better) Translates to: LSSGYTAELEGRKAL*ELQFLSAQAVVAGL Trigger: AAGTCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 90 bp | CCCAAGGTGTCCGACCCTTGCTTTCCTCCGGGTACACGGCCGAACTaGAAGGCCGCAAAGCATTGTGGGAGTTGCAGTTTCTTAGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: PKVSDPCFPPGTRPN*KAAKHCGSCSFLVR Trigger: GCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAGCAAGGGTCGGACACCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 90 bp | GCAAAGCATTGTGGGAGTTGCAGTTTCTTAGTGCGCAGGCTGTCGTaGCCGGACTTTCTCAGGAGCGTGCTTCAGTATTCACGGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: AKHCGSCSFLVRRLS*PDFLRSVLQYSRSS Trigger: ACTGGACCGTGAATACTGAAGCACGCTCCTGAGAAAGTCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS-3UTR CAA 90 bp | AGATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATAACATCCGCCTCCTTATaGGCTGCGAACCTCGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: RCLSSILHKNQKCTHGAITSASL*AANLAR Trigger: TCGCGCGAGGTTCGCAGCCAATAAGGAGGCGGATGT...TATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS TCA 90 bp | ACACAAGAATCAGAAGTGCACACATGGTGCCATATTTGGAAGTCATaGAGAAAAACTGAACAGCATTACCGAGGAAAAACTTCTTACTCC | + |
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Preference number: 5 (lower is better) Translates to: TQESEVHTWCHIWKS*RKTEQHYRGKTSYS Trigger: GGAGTAAGAAGTTTTTCCTCGGTAATGCTGTTCAGTTTTTCTTCATGACTTCCAAATATGGCACCATGTGTGCACTTCTGATTCTTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR CAA 90 bp | CCACATAAACTTCCAGTTACAGGTATTTTATTGAGCAGAGACAGTGAAGTTCCTTTCTGCTGGCATCAGTaGATTCAACATCAACATGCA | + |
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Preference number: 5 (lower is better) Translates to: PHKLPVTGILLSRDSEVPFCWHQ*IQHQHA Trigger: TGCATGTTGATGTTGAATCAACTGATGCCAGCAGAA...AGGAACTTCACTGTCTCTGCTCAATAAAATACCTGTAACTGGAAGTTTATGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR CAA 90 bp | AATAGCTTTCTGCTGGCATCAGTTGATTCAACATCAACATGCAGTGTCCAGAATTTTAGAAAGCCATTCTaGTTTCTGCTGTTGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: NSFLLASVDSTSTCSVQNFRKPF*FLLLSF Trigger: AAAGCTCAACAGCAGAAACAAGAATGGCTTTCTAAA...ATTCTGGACACTGCATGTTGATGTTGAATCAACTGATGCCAGCAGAAAGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264255.8 |
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| CDS-3UTR CAA 90 bp | AGATGTCTGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATACACATGGTGCCATATTaGGAAGTCATGAAGAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: RCLSSILHKNQKCTHGAIHMVPY*EVMKKN Trigger: GTTTTTCTTCATGACTTCCAAATATGGCACCATGTG...TATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACAGACATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS-3UTR CAA 90 bp | TGTCTAGTATTTTACACAAGAATCAGAAGTGCACACATGGTGCCATATTTGGAATTTAGAAAGCCATTCTaGTTTCTGCTGTTGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: CLVFYTRIRSAHMVPYLEFRKPF*FLLLSF Trigger: AAAGCTCAACAGCAGAAACAAGAATGGCTTTCTAAA...TTCCAAATATGGCACCATGTGTGCACTTCTGATTCTTGTGTAAAATACTAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434323.5 |
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| CDS GCA 72 bp | AGGGGCGGGCGGTCGGGTGGCGAACAGTTCTGCGCGTaGGCCTCCCGCCCAGCAGCCCGGAACCCAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RGGRSGGEQFCA*ASRPAARNPRC Trigger: ACACCTTGGGTTCCGGGCTGCTGGGCGGGAGGCGCACGCGCAGAACTGTTCGCCACCCGACCGCCCGCCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 72 bp | CACCTTGGACGCCAGAGGAAGGGGCGGGCGGTCGGGTaGCGAACAGTTCTGCGCGTGCGCCTCCCGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HLGRQRKGRAVG*RTVLRVRLPPS Trigger: GCTGGGCGGGAGGCGCACGCGCAGAACTGTTCGCCACCCGACCGCCCGCCCCTTCCTCTGGCGTCCAAGGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 90 bp | CGTGCGCCTCCCGCCCAGCAGCCCGGAACCCAAGGTGTCCGACCCTaGCTTTCCTCCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RAPPAQQPGTQGVRP*LSSGYTAELEGRKA Trigger: TGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAGCAAGGGTCGGACACCTTGGGTTCCGGGCTGCTGGGCGGGAGGCGCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 72 bp | CCGCCCAGCAGCCCGGAACCCAAGGTGTCCGACCCTTaGTTTCCTCCGGGTACACGGCCGAACTGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PPSSPEPKVSDP*FPPGTRPNWKA Trigger: GGCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAGCAAGGGTCGGACACCTTGGGTTCCGGGCTGCTGGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 72 bp | CCCGCCCAGCAGCCCGGAACCCAAGGTGTCCGACCCTaGCTTTCCTCCGGGTACACGGCCGAACTGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PAQQPGTQGVRP*LSSGYTAELEG Trigger: GCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAGCAAGGGTCGGACACCTTGGGTTCCGGGCTGCTGGGCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 72 bp | CTCCTTATTGGCTGCGAACCTCGCGCGATATCACCTTaGACGCCAGAGGAAGGGGCGGGCGGTCGGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LLIGCEPRAISP*TPEEGAGGRVA Trigger: CGCCACCCGACCGCCCGCCCCTTCCTCTGGCGTCCAAGGTGATATCGCGCGAGGTTCGCAGCCAATAAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 72 bp | CCTCCTTATTGGCTGCGAACCTCGCGCGATATCACCTaGGACGCCAGAGGAAGGGGCGGGCGGTCGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: PPYWLRTSRDIT*DARGRGGRSGG Trigger: GCCACCCGACCGCCCGCCCCTTCCTCTGGCGTCCAAGGTGATATCGCGCGAGGTTCGCAGCCAATAAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 90 bp | TCACATCCGCCTCCTTATTGGCTGCGAACCTCGCGCGATATCACCTaGGACGCCAGAGGAAGGGGCGGGCGGTCGGGTGGCGAACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SHPPPYWLRTSRDIT*DARGRGGRSGGEQF Trigger: GAACTGTTCGCCACCCGACCGCCCGCCCCTTCCTCTGGCGTCCAAGGTGATATCGCGCGAGGTTCGCAGCCAATAAGGAGGCGGATGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 72 bp | TGCGCAGGCTGTCGTGGCCGGACTTTCTCAGGAGCGTaGTTCAGTATTCACGGTCCAGTGCGCCAGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: CAGCRGRTFSGA*FSIHGPVRQTG Trigger: TCCAGTCTGGCGCACTGGACCGTGAATACTGAAGCACGCTCCTGAGAAAGTCCGGCCACGACAGCCTGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 72 bp | CGGCCGAACTGGAAGGCCGCAAAGCATTGTGGGAGTTaGAGTTTCTTAGTGCGCAGGCTGTCGTGGCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: RPNWKAAKHCGS*SFLVRRLSWPD Trigger: GTCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 72 bp | ACGGCCGAACTGGAAGGCCGCAAAGCATTGTGGGAGTaGCAGTTTCTTAGTGCGCAGGCTGTCGTGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: TAELEGRKALWE*QFLSAQAVVAG Trigger: TCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 90 bp | TCCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCATTGTGGGAGTaGCAGTTTCTTAGTGCGCAGGCTGTCGTGGCCGGACTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SGYTAELEGRKALWE*QFLSAQAVVAGLSQ Trigger: CTGAGAAAGTCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 90 bp | TTGCTTTCCTCCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCATaGTGGGAGTTGCAGTTTCTTAGTGCGCAGGCTGTCGTGGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LLSSGYTAELEGRKA*WELQFLSAQAVVAG Trigger: TCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGAGGAAAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 72 bp | GGGTACACGGCCGAACTGGAAGGCCGCAAAGCATTGTaGGAGTTGCAGTTTCTTAGTGCGCAGGCTGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: GYTAELEGRKAL*ELQFLSAQAVV Trigger: CACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 72 bp | TCCGGGTACACGGCCGAACTGGAAGGCCGCAAAGCATaGTGGGAGTTGCAGTTTCTTAGTGCGCAGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SGYTAELEGRKA*WELQFLSAQAV Trigger: GACAGCCTGCGCACTAAGAAACTGCAACTCCCACAATGCTTTGCGGCCTTCCAGTTCGGCCGTGTACCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS GCA 72 bp | CTTTCTCAGGAGCGTGCTTCAGTATTCACGGTCCAGTaGGCCAGACTGGAAATGAGACAGCTGTGCTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LSQERASVFTVQ*ARLEMRQLCSR Trigger: GCGAGAGCACAGCTGTCTCATTTCCAGTCTGGCGCACTGGACCGTGAATACTGAAGCACGCTCCTGAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CCA 72 bp | TGTGGGAGTTGCAGTTTCTTAGTGCGCAGGCTGTCGTaGCCGGACTTTCTCAGGAGCGTGCTTCAGTATTCA | + |
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Preference number: 6 (lower is better) Translates to: CGSCSFLVRRLS*PDFLRSVLQYS Trigger: TGAATACTGAAGCACGCTCCTGAGAAAGTCCGGCCACGACAGCCTGCGCACTAAGAAACTGCAACTCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477337.1 |
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| CDS CAA 90 bp | ACACAAAGAACGAAATGTAACTACTACAGCACATGTATATATAAGTaGTTAGGCGCATACTGTTATAGCAATTTCAGAAAGCAGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TQRTKCNYYSTCIYK*LGAYCYSNFRKQGR Trigger: TCTGCCCTGCTTTCTGAAATTGCTATAACAGTATGCGCCTAACAACTTATATATACATGTGCTGTAGTAGTTACATTTCGTTCTTTGTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465183.1 |
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| CDS CCA 72 bp | AAACGATCTTGGGCAGATCTTTCTTTTACTCGACTGTaGATTAATATAGAGATTGGGCTAATTTTGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: KRSWADLSFTRL*INIEIGLILNV Trigger: GACATTCAAAATTAGCCCAATCTCTATATTAATCCACAGTCGAGTAAAAGAAAGATCTGCCCAAGATCGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465183.1 |
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