Pregenerated sensors for TXNDC8 (Homo sapiens)
Ensembl gene IDs: ENSG00000204193Ensembl transcript IDs: ENST00000374507.4, ENST00000374510.8, ENST00000374511.7, ENST00000423740.7
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAATAAAACCAGAAAATTATACTGAACTGGAGAGAAACTTGCCCTaGATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: GIKPENYTELERNLP*IRLVPGQNQEERLS Trigger: GCTCAGCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAGTATAATTTTCTGGTTTTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 90 bp | TATCCACTTGGGATTCTTCTAGTCACTGAGCTTTCAAATCAGACATaGCCTCCTTCAGGTGCTTGGACTAGTATGAGAAAAATACATGAA | + |
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Preference number: 1 (lower is better) Translates to: YPLGILLVTELSNQT*PPSGAWTSMRKIHE Trigger: TTCATGTATTTTTCTCATACTAGTCCAAGCACCTGAAGGAGGTCATGTCTGATTTGAAAGCTCAGTGACTAGAAGAATCCCAAGTGGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCGAGAGAAACTTGCCCTaGATCAGGTTGGTACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSLPSLLRALPSPYRIETERNLP*IRLVPG Trigger: TCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTC...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGCTTTCAAATCAGACATaGCCTCCTTCAGGTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LNWRETCPESGWYQDRIRLSNQT*PPSGAW Trigger: CCAAGCACCTGAAGGAGGTCATGTCTGATTTGAAAG...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGTGTAGGCTTCAGGCATaGATAGATTCAGGGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LNWRETCPESGWYQDRIRCRLQA*IDSGCS Trigger: ACTGCACCCTGAATCTATCCATGCCTGAAGCCTACA...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGGAGCATAGGGAGGGATaGGAGATAAAGTCAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LNWRETCPESGWYQDRIREHREG*EIKSKE Trigger: CTCTTTTGACTTTATCTCTCATCCCTCCCTATGCTC...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCAAACAGAGAAAGGCTTaGAGCAGTAGATTGGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: RETCPESGWYQDRIRRRGKQRKA*SSRLGQ Trigger: TTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTT...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR TCA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTATTTTTGGGTTGCAAGTaGCAGAGAAACCAACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLFLGCK*QRNQPR Trigger: TCTGGGTTGGTTTCTCTGTCACTTGCAACCCAAAAA...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGCAGAGTTTACATAGCTaGAGAATCTATGGGGATAGT | + |
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Preference number: 2 (lower is better) Translates to: LNWRETCPESGWYQDRIRQSLHS*RIYGDS Trigger: ACTATCCCCATAGATTCTTCAGCTATGTAAACTCTG...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCCATGCCTTTCCTCAAAAGCATAGCTTGAATTGGTTCAAGAGCATAGACAACTGGAGAGAAACTTaGCCTGAATCAGGTTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: QGHAFPQKHSLNWFKSIDNWRET*PESGWY Trigger: GTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTT...GTCTATGCTCTTGAACCAATTCAAGCTATGCTTTTGAGGAAAGGCATGGCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGTCATCACACACATCATaGGTATTTTCTATCCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LNWRETCPESGWYQDRIRSSHTS*VFSIHL Trigger: CAAGTGGATAGAAAATACTCATGATGTGTGTGATGA...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR CAA 90 bp | GGAAATGGATTGAACCAAAAAGATAGATATCCAAAACGGATATATTaGACTATAACAGGAGACAAGCCAGAGGAGAGCATAGGGAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GNGLNQKDRYPKRIY*TITGDKPEESIGRD Trigger: ATCCCTCCCTATGCTCTCCTCTGGCTTGTCTCCTGTTATAGTCAAATATATCCGTTTTGGATATCTATCTTTTTGGTTCAATCCATTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 72 bp | CAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTaGGACCAAGCAGGGCCATGCCTTTCCTCAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: QLIEGTSIPIQN*DQAGPCLSSKA Trigger: TGCTTTTGAGGAAAGGCATGGCCCTGCTTGGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCGAAGTAGGAATGACATaGCTAAAGGAGAGAGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: RETCPESGWYQDRIRRRGEVGMT*LKERGR Trigger: TCTACCTCTCTCCTTTAGCAATGTCATTCCTACTTC...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCATTAGTACTCTTGGCTaGACTCTGTTTTCTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RETCPESGWYQDRIRRRGISTLG*TLFSSV Trigger: CACAGAAGAAAACAGAGTCAAGCCAAGAGTACTAAT...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CAA 90 bp | AGATCTGAGTTAAACAGAGAAAGGCTTGGAGCAGTAGATTGGGTCAAAATTATGGGTGCAGGGAGATCCTaGGTGACTTTAGAGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: RSELNRERLGAVDWVKIMGAGRS*VTLERT Trigger: TGTCCTCTCTAAAGTCACCAAGGATCTCCCTGCACC...CATAATTTTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTTAACTCAGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CAA 90 bp | CAGGGCCATGCCTTTCCTCAAAAGCATAGCTTGAATTGGTTCAAGAGCATAGACGCTTGGAGCAGTAGATaGGGTCAAAATTATGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: QGHAFPQKHSLNWFKSIDAWSSR*GQNYGE Trigger: TTCTCCATAATTTTGACCCAATCTACTGCTCCAAGC...GTCTATGCTCTTGAACCAATTCAAGCTATGCTTTTGAGGAAAGGCATGGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR-3UTR CAA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTACCAAAACGGATATATTaGACTATAACAGGAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLPKRIY*TITGDK Trigger: CTTGTCTCCTGTTATAGTCAAATATATCCGTTTTGG...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 72 bp | TTCAGGGTGCAGTCAATGCCATTAGTACTCTTGGCTTaGCTCTGTTTTCTTCTGTGTGGTAGATTCGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: FRVQSMPLVLLA*LCFLLCGRFVF Trigger: GAAAACGAATCTACCACACAGAAGAAAACAGAGTCAAGCCAAGAGTACTAATGGCATTGACTGCACCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 72 bp | GGGATTCTTCTAGTCACTGAGCTTTCAAATCAGACATaGCCTCCTTCAGGTGCTTGGACTAGTATGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GILLVTELSNQT*PPSGAWTSMRK Trigger: TTTTCTCATACTAGTCCAAGCACCTGAAGGAGGTCATGTCTGATTTGAAAGCTCAGTGACTAGAAGAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 72 bp | GAGTATTTTCTATCCACTTGGGATTCTTCTAGTCACTaGGCTTTCAAATCAGACATGACCTCCTTCAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: EYFLSTWDSSSH*AFKSDMTSFRC Trigger: GCACCTGAAGGAGGTCATGTCTGATTTGAAAGCTCAGTGACTAGAAGAATCCCAAGTGGATAGAAAATACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR CCA 72 bp | CAGGGCCATGCCTTTCCTCAAAAGCATAGCTTGAATTaGTTCAAGAGCATAGACACAAAATCAGTTGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: QGHAFPQKHSLN*FKSIDTKSVEN Trigger: GTTCTCAACTGATTTTGTGTCTATGCTCTTGAACCAATTCAAGCTATGCTTTTGAGGAAAGGCATGGCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 72 bp | TTCTGTGTGGTAGATTCGTTTTCAGGTTTTACATGGTaGCAAGCTGTAGTAGCTTCAGACTCATATCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FCVVDSFSGFTW*QAVVASDSYLP Trigger: GGGAAGATATGAGTCTGAAGCTACTACAGCTTGTCACCATGTAAAACCTGAAAACGAATCTACCACACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR TCA 72 bp | GAGTCTTGTGTCATCATAAAATGGAGTAAAAACTGTTaGGTGGCAGCAGCTACCAAACAATATCAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ESCVIIKWSKNC*VAAATKQYQQQ Trigger: CTGCTGCTGATATTGTTTGGTAGCTGCTGCCACTCAACAGTTTTTACTCCATTTTATGATGACACAAGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGTCAAGGGTCCATTTCTaGTGGGGATGGAGTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: LNWRETCPESGWYQDRIRSRVHF*WGWSSL Trigger: CAGTGAACTCCATCCCCATCAGAAATGGACCCTTGA...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCAGAAAATTGAACCACTaGGAGTTTGTGTCCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RETCPESGWYQDRIRRRGRKLNH*EFVSGS Trigger: GCTGCCGGACACAAACTCGCAGTGGTTCAATTTTCT...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCAGCTCTGGTTTGACTTaGATTGGCTTGACTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSLPSLLRALPSPYRIETSSGLT*IGLTGV Trigger: GACTCCAGTCAAGCCAATCCAAGTCAAACCAGAGCT...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCTGTAGGCTTCAGGCATaGATAGATTCAGGGTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSLPSLLRALPSPYRIETCRLQA*IDSGCS Trigger: ACTGCACCCTGAATCTATCCATGCCTGAAGCCTACA...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCTTTTTGGGTTGCAAGTaGCAGAGAAACCAACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RETCPESGWYQDRIRRRGFLGCK*QRNQPR Trigger: TCTGGGTTGGTTTCTCTGTCACTTGCAACCCAAAAA...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCGAGCATAGGGAGGGATaGGAGATAAAGTCAAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RETCPESGWYQDRIRRRGEHREG*EIKSKE Trigger: CTCTTTTGACTTTATCTCTCATCCCTCCCTATGCTC...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCAACTGGAGAGAAACTTaGCCTGAATCAGGTTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RETCPESGWYQDRIRRRGNWRET*PESGWY Trigger: GTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTT...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCGTTTCAGCCAGCTCATaGAAAACAGGAAACATCCTT | + |
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Preference number: 4 (lower is better) Translates to: RETCPESGWYQDRIRRRGVSASS*KTGNIL Trigger: AAGGATGTTTCCTGTTTTCCATGAGCTGGCTGAAAC...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | CAGGGCCATGCCTTTCCTCAAAAGCATAGCTTGAATTGGTTCAAGAGCATAGACTGCCCTGAATCAGGTTaGTACCAGGACAGAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: QGHAFPQKHSLNWFKSIDCPESG*YQDRIR Trigger: CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCA...GTCTATGCTCTTGAACCAATTCAAGCTATGCTTTTGAGGAAAGGCATGGCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGCCTTCTGGCTTTTCTTaGACATCTGAAATGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LNWRETCPESGWYQDRIRPSGFS*TSEMWV Trigger: TACCCACATTTCAGATGTTCAAGAAAAGCCAGAAGG...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCCAGAGTTTACATAGCTaGAGAATCTATGGGGATAGT | + |
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Preference number: 4 (lower is better) Translates to: SSLPSLLRALPSPYRIETQSLHS*RIYGDS Trigger: ACTATCCCCATAGATTCTTCAGCTATGTAAACTCTG...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | CAGGGCCATGCCTTTCCTCAAAAGCATAGCTTGAATTGGTTCAAGAGCATAGACCTTTCAAATCAGACATaGCCTCCTTCAGGTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QGHAFPQKHSLNWFKSIDLSNQT*PPSGAW Trigger: CCAAGCACCTGAAGGAGGTCATGTCTGATTTGAAAG...GTCTATGCTCTTGAACCAATTCAAGCTATGCTTTTGAGGAAAGGCATGGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCAGACACAAAATCAGTTaGGAACTCAGAGTCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSLPSLLRALPSPYRIETRHKIS*ELRVLC Trigger: ACACAAGACTCTGAGTTCTCAACTGATTTTGTGTCT...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCGTAAAAACTGTTGAGTaGCAGCAGCTACCAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: SSLPSLLRALPSPYRIETVKTVE*QQLPNN Trigger: ATTGTTTGGTAGCTGCTGCCACTCAACAGTTTTTAC...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGATGTGGGTATTGTTTTaGTGTGACAAGTTTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LNWRETCPESGWYQDRIRMWVLF*CDKFQP Trigger: TGGCTGAAACTTGTCACATCAAAACAATACCCACAT...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCGGTTATTTACCTAGCTaGTTAAGCAAAGTCCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RETCPESGWYQDRIRRRGGYLPS*LSKVLK Trigger: TTTCAGGACTTTGCTTAAGCAGCTAGGTAAATAACC...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCCTTGGAGCAGTAGATTaGGTCAAAATTATGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSLPSLLRALPSPYRIETLGAVD*VKIMEK Trigger: TTTCTCCATAATTTTGACCCAATCTACTGCTCCAAG...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTAGATTCTTCTAGTCACTaGGCTTTCAAATCAGACATG | + |
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Preference number: 4 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLDSSSH*AFKSDM Trigger: CATGTCTGATTTGAAAGCTCAGTGACTAGAAGAATC...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | AGATCTGAGTTAAACAGAGAAAGGCTTGGAGCAGTAGATTGGGTCAAAATTATGGAGAGAAACTTGCCCTaGATCAGGTTGGTACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RSELNRERLGAVDWVKIMERNLP*IRLVPG Trigger: TCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTC...CATAATTTTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTTAACTCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR GCA 90 bp | AGATCTGAGTTAAACAGAGAAAGGCTTGGAGCAGTAGATTGGGTCAAAATTATGCAGGAAACATCCTTTTaGAGGGACCACACCGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: RSELNRERLGAVDWVKIMQETSF*RDHTVS Trigger: CGAAACGGTGTGGTCCCTGCAAAAGGATGTTTCCTG...CATAATTTTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTTAACTCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | CAGGGCCATGCCTTTCCTCAAAAGCATAGCTTGAATTGGTTCAAGAGCATAGACTCATCACACACATCATaGGTATTTTCTATCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: QGHAFPQKHSLNWFKSIDSSHTS*VFSIHL Trigger: CAAGTGGATAGAAAATACTCATGATGTGTGTGATGA...GTCTATGCTCTTGAACCAATTCAAGCTATGCTTTTGAGGAAAGGCATGGCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTAAAAATTATACTGAACTaGAGAGAAACTTGCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLKIILN*RETCPE Trigger: TTCAGGGCAAGTTTCTCTCCAGTTCAGTATAATTTT...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | AGATCTGAGTTAAACAGAGAAAGGCTTGGAGCAGTAGATTGGGTCAAAATTATGTGGAGTAAAAACTGTTaGGTGGCAGCAGCTACCAAA | + |
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Preference number: 4 (lower is better) Translates to: RSELNRERLGAVDWVKIMWSKNC*VAAATK Trigger: TTTGGTAGCTGCTGCCACTCAACAGTTTTTACTCCA...CATAATTTTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTTAACTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR TCA 90 bp | AGATCTGAGTTAAACAGAGAAAGGCTTGGAGCAGTAGATTGGGTCAAAATTATGCGTTTCGAAGAAAATTaGACCACTGCGAGTTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RSELNRERLGAVDWVKIMRFEEN*TTASLC Trigger: ACACAAACTCGCAGTGGTTCAATTTTCTTCGAAACG...CATAATTTTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTTAACTCAGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CCA 90 bp | AGATCTGAGTTAAACAGAGAAAGGCTTGGAGCAGTAGATTGGGTCAAAATTATGAAGCATAGCTTGAATTaGTTCAAGAGCATAGACACA | + |
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Preference number: 4 (lower is better) Translates to: RSELNRERLGAVDWVKIMKHSLN*FKSIDT Trigger: TGTGTCTATGCTCTTGAACCAATTCAAGCTATGCTT...CATAATTTTGACCCAATCTACTGCTCCAAGCCTTTCTCTGTTTAACTCAGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| 3UTR CAA 72 bp | TTGAACCAAAAAGATAGATATCCAAAACGGATATATTaGACTATAACAGGAGACAAGCCAGAGGAGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: LNQKDRYPKRIY*TITGDKPEESI Trigger: TATGCTCTCCTCTGGCTTGTCTCCTGTTATAGTCAAATATATCCGTTTTGGATATCTATCTTTTTGGTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCGGTGCAGGGAGATCCTaGGTGACTTTAGAGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SSLPSLLRALPSPYRIETGAGRS*VTLERT Trigger: TGTCCTCTCTAAAGTCACCAAGGATCTCCCTGCACC...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS CCA 90 bp | ACTGGAGTCAAGGGTCCATTTCTGATGGGGATGGAGTTCACTGGTTaGTGTAGGCCTGGAGATGGAGCCCTTCTGGCTTTTCTTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: TGVKGPFLMGMEFTG*CRPGDGALLAFLEH Trigger: ATGTTCAAGAAAAGCCAGAAGGGCTCCATCTCCAGGCCTACACCAACCAGTGAACTCCATCCCCATCAGAAATGGACCCTTGACTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCACAGGAAACATCCTTTaGCAGGGACCACACCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: SSLPSLLRALPSPYRIETTGNIL*QGPHRF Trigger: GAAACGGTGTGGTCCCTGCAAAAGGATGTTTCCTGT...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTATCTCTCCCCAGCTTATaGAGGGCACTTCCATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLSLPSL*RALPSP Trigger: TGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGA...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | CTGAACTGGAGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGCCGTTTCGAAGAAAATaGAACCACTGCGAGTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: LNWRETCPESGWYQDRIRPFRRK*NHCEFV Trigger: CACAAACTCGCAGTGGTTCAATTTTCTTCGAAACGG...CCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCTCCAGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | TCCTCTCTCCCCAGCTTATTGAGGGCACTTCCATCCCCATACAGAATTGAGACCGCTTGGAGCAGTAGATaGGGTCAAAATTATGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSLPSLLRALPSPYRIETAWSSR*GQNYGE Trigger: TTCTCCATAATTTTGACCCAATCTACTGCTCCAAGC...GGTCTCAATTCTGTATGGGGATGGAAGTGCCCTCAATAAGCTGGGGAGAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | AGAGAAACTTGCCCTGAATCAGGTTGGTACCAGGACAGAATCAGGAGGAGAGGCCCAAAACGGATATATTaGACTATAACAGGAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: RETCPESGWYQDRIRRRGPKRIY*TITGDK Trigger: CTTGTCTCCTGTTATAGTCAAATATATCCGTTTTGG...GCCTCTCCTCCTGATTCTGTCCTGGTACCAACCTGATTCAGGGCAAGTTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTAGAAGTAGGAATGACATaGCTAAAGGAGAGAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLEVGMT*LKERGR Trigger: TCTACCTCTCTCCTTTAGCAATGTCATTCCTACTTC...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS-3UTR CAA 90 bp | GAACAGAGATATGGTGCTAAGTTGAGGGTGAGGAGGGGGCATTGCAATTGTCTAATTAGTACTCTTGGCTaGACTCTGTTTTCTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: EQRYGAKLRVRRGHCNCLISTLG*TLFSSV Trigger: CACAGAAGAAAACAGAGTCAAGCCAAGAGTACTAAT...TAGACAATTGCAATGCCCCCTCCTCACCCTCAACTTAGCACCATATCTCTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS CCA 90 bp | CTGTACCATGATTACACCAGGGAAGTGCTGATGAAAATCCCCTGTTaGTTTAGTTGGATCACTGTAGCTGTCTCCTATTTATTACAGTAT | + |
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Preference number: 5 (lower is better) Translates to: LYHDYTREVLMKIPC*FSWITVAVSYLLQY Trigger: ATACTGTAATAAATAGGAGACAGCTACAGTGATCCAACTAAACCAACAGGGGATTTTCATCAGCACTTCCCTGGTGTAATCATGGTACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374511.7 |
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| CDS CCA 72 bp | AAGGGTCCATTTCTGATGGGGATGGAGTTCACTGGTTaGTGTAGGCCTGGAGATGGAGCCCTTCTGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KGPFLMGMEFTG*CRPGDGALLAF Trigger: AAAAGCCAGAAGGGCTCCATCTCCAGGCCTACACCAACCAGTGAACTCCATCCCCATCAGAAATGGACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374507.4 |
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| CDS CAA 72 bp | CATCCTTTTGCAGGGACCACACCGTTTCGAAGAAAATaGAACCACTGCGAGTTTGTGTCCGGCAGCTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: HPFAGTTPFRRK*NHCEFVSGSCQ Trigger: TTGACAGCTGCCGGACACAAACTCGCAGTGGTTCAATTTTCTTCGAAACGGTGTGGTCCCTGCAAAAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000374507.4 ENST00000374510.8 ENST00000374511.7 ENST00000423740.7 |
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| CDS TCA 72 bp | ATCCTTTTGCAGGGACCACACCGTTTCGAAGAAAATTaGACCACTGCGAGTTTGTGTCCGGCAGCTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ILLQGPHRFEEN*TTASLCPAAVK Trigger: TTTGACAGCTGCCGGACACAAACTCGCAGTGGTTCAATTTTCTTCGAAACGGTGTGGTCCCTGCAAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000374507.4 ENST00000374510.8 ENST00000374511.7 ENST00000423740.7 |
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| CDS GCA 72 bp | GCAGGGACCACACCGTTTCGAAGAAAATTGAACCACTaGGAGTTTGTGTCCGGCAGCTGTCAAAAATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AGTTPFRRKLNH*EFVSGSCQKCF Trigger: AAAACATTTTTGACAGCTGCCGGACACAAACTCGCAGTGGTTCAATTTTCTTCGAAACGGTGTGGTCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000374507.4 ENST00000374510.8 ENST00000374511.7 ENST00000423740.7 |
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| CDS CCA 72 bp | GATTACACCAGGGAAGTGCTGATGAAAATCCCCTGTTaGTTTAGTTGGATCACTGTAGCTGTCTCCTATTTA | + |
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Preference number: 6 (lower is better) Translates to: DYTREVLMKIPC*FSWITVAVSYL Trigger: TAAATAGGAGACAGCTACAGTGATCCAACTAAACCAACAGGGGATTTTCATCAGCACTTCCCTGGTGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374511.7 |
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| CDS CCA 72 bp | AGGGAAGTGCTGATGAAAATCCCCTGTTGGTTTAGTTaGATCACTGTAGCTGTCTCCTATTTATTACAGTAT | + |
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Preference number: 6 (lower is better) Translates to: REVLMKIPCWFS*ITVAVSYLLQY Trigger: ATACTGTAATAAATAGGAGACAGCTACAGTGATCCAACTAAACCAACAGGGGATTTTCATCAGCACTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374511.7 |
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