RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TXNDC15 (Homo sapiens)

Ensembl gene IDs: ENSG00000113621

Ensembl transcript IDs: ENST00000358387.9, ENST00000505174.1, ENST00000506350.1, ENST00000506916.1, ENST00000507024.5, ENST00000508779.1, ENST00000508810.1, ENST00000509954.1, ENST00000511070.5

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAGCGCCATCCAGAGAGAAAAGGCTCTCTCGGACGTTGCACCTTaGGTCCTCCGCTCCTCCAGCACCACAGGTGACGCCGCTAGGCTC +
Preference number: 1 (lower is better)
Translates to: SSAIQREKALSDVAP*VLRSSSTTGDAARL
Trigger: GAGCCTAGCGGCGTCACCTGTGGTGCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCTTTTCTCTCTGGATGGCGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR TCA 90 bp ACTTTGTCCTCAGCTTCCCCAGGAATCACAGACAGCATCACCATGTaGTCGCCTTGGGTGTCCAGCCCCAGCACCGCATTGGCCTCTTCT +
Preference number: 1 (lower is better)
Translates to: TLSSASPGITDSITM*SPWVSSPSTALASS
Trigger: AGAAGAGGCCAATGCGGTGCTGGGGCTGGACACCCAAGGCGATCACATGGTGATGCTGTCTGTGATTCCTGGGGAAGCTGAGGACAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR CCA 90 bp GTTATTGGAGTCCTCTGTCGGGGCTGCGTCAGATTCCGCCACTTCTaGCTCTGTGTAATACTCCTCTTCTCTGTCAGGGAAGTGTGCTCC +
Preference number: 1 (lower is better)
Translates to: VIGVLCRGCVRFRHF*LCVILLFSVREVCS
Trigger: GGAGCACACTTCCCTGACAGAGAAGAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGACTCCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 90 bp CACTTCTGGCTCTGTGTAATACTCCTCTTCTCTGTCAGGGAAGTGTaGTCCAGCGCCATCCAGAGAGAAAAGGCTCTCTCGGACGTTGCA +
Preference number: 1 (lower is better)
Translates to: HFWLCVILLFSVREV*SSAIQREKALSDVA
Trigger: TGCAACGTCCGAGAGAGCCTTTTCTCTCTGGATGGCGCTGGAGCACACTTCCCTGACAGAGAAGAGGAGTATTACACAGAGCCAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 90 bp TGGGGATTTCAGACTTTCAGTGTTATTGGAGTCCTCTGTCGGGGCTaGGTCAGATTCCGCCACTTCTGGCTCTGTGTAATACTCCTCTTC +
Preference number: 1 (lower is better)
Translates to: WGFQTFSVIGVLCRG*VRFRHFWLCVILLF
Trigger: GAAGAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGACTCCAATAACACTGAAAGTCTGAAATCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 90 bp TCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGCCACCGAATACTCTCAGTTCGAATG +
Preference number: 1 (lower is better)
Translates to: SSFQLLSDHHYSTCS*SCPGISHRILSVRM
Trigger: CATTCGAACTGAGAGTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR GCA 90 bp AGAATAAGGAAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTTGGTCGGCTTGAGTTACCACCACAT +
Preference number: 1 (lower is better)
Translates to: RIRKIQATSPHFLSK*WEEGLFGRLELPPH
Trigger: ATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTTCCTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR CCA 90 bp ATAAGGAAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTaGGAAGAGGGCCTATTTGGTCGGCTTGAGTTACCACCACATTCT +
Preference number: 1 (lower is better)
Translates to: IRKIQATSPHFLSKC*EEGLFGRLELPPHS
Trigger: AGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTTCCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR CAA 90 bp AAGTGTGCTCCAGCGCCATCCAGAGAGAAAAGGCTCTCTCGGACGTaGCACCTTGAGTCCTCCGCTCCTCCAGCACCACAGGTGACGCCG +
Preference number: 2 (lower is better)
Translates to: KCAPAPSREKRLSRT*HLESSAPPAPQVTP
Trigger: CGGCGTCACCTGTGGTGCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCTTTTCTCTCTGGATGGCGCTGGAGCACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR CAA 90 bp CTCAGCTTCCCCAGGAATCACAGACAGCATCACCATGTGATCGCCTaGGGTGTCCAGCCCCAGCACCGCATTGGCCTCTTCTGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: LSFPRNHRQHHHVIA*GVQPQHRIGLFCCP
Trigger: AGGGCAGCAGAAGAGGCCAATGCGGTGCTGGGGCTGGACACCCAAGGCGATCACATGGTGATGCTGTCTGTGATTCCTGGGGAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR TCA 90 bp CCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACTCTCAGTTCGAATCGGACGTTGCACCTTaGGTCCTCCGCTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: PHVPALVLELATEYSQFESDVAP*VLRSSS
Trigger: GCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGA...TTCGAACTGAGAGTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR TCA 90 bp TTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGACGCCGCTAGGCTCTaGACTCACTTTGTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: FQTITTPHVPALVLELATDAARL*THFVLS
Trigger: GCTGAGGACAAAGTGAGTTCAGAGCCTAGCGGCGTC...GGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR CCA 90 bp GTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTTCTGCTGCCCTGTCCTaGCCCATCGGGTCATGCAGG +
Preference number: 2 (lower is better)
Translates to: VPLSNFFQTITTPHVPALSAALS*PIGSCR
Trigger: CCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGA...AAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR CCA 90 bp TTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCAGTGAGGGGCCAAACTaGCAGAAAAGCGGCACCACG +
Preference number: 2 (lower is better)
Translates to: FQTITTPHVPALVLELATSEGPN*QKSGTT
Trigger: CGTGGTGCCGCTTTTCTGCCAGTTTGGCCCCTCACT...GGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR GCA 90 bp TCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCGCATTGGCCTCTTCTaGTGCCCTGTCCTGGCCCAT +
Preference number: 2 (lower is better)
Translates to: SSFQLLSDHHYSTCSCSCRIGLF*CPVLAH
Trigger: ATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCG...ACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR TCA 90 bp TCTTGTCCTGGAATTAGCCACCGAATACTCTCAGTTCGAATGGTAGCATACATAGACAGCATCACCATGTaGTCGCCTTGGGTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: SCPGISHRILSVRMVAYIDSITM*SPWVSS
Trigger: GCTGGACACCCAAGGCGATCACATGGTGATGCTGTC...TATGTATGCTACCATTCGAACTGAGAGTATTCGGTGGCTAATTCCAGGACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR CCA 90 bp TATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAAGCCCCAGCACCGCATTaGCCTCTTCTGCTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: YFCLLYSKHVILLTILPEAPAPH*PLLLPC
Trigger: ACAGGGCAGCAGAAGAGGCCAATGCGGTGCTGGGGC...TTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR CAA 90 bp CAACCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCACCACATTCTTCTTGGCTTCTATACC +
Preference number: 2 (lower is better)
Translates to: QPVHTFYQSAGKRAY*VGLSYHHILLGFYT
Trigger: GGTATAGAAGCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR GCA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTGGCTCTCTCGGACGTTaGACCTTGAGTCCTCCGCTC +
Preference number: 2 (lower is better)
Translates to: CHSTHYSAGIHLHISNWIGSLGR*TLSPPL
Trigger: GAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCC...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR GCA 90 bp GTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTGAAGAGCTGGAAATaGCCGGGGCAGAGAGTTAAA +
Preference number: 2 (lower is better)
Translates to: VPLSNFFQTITTPHVPALVKSWK*PGQRVK
Trigger: TTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCAC...AAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR CAA 90 bp CACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTTCTTGGCTTCTATACCTGTCTGATT +
Preference number: 2 (lower is better)
Translates to: HTFYQSAGKRAYLVG*SYHHILLGFYTCLI
Trigger: AATCAGACAGGTATAGAAGCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR TCA 90 bp CCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTTGTGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: PVHTFYQSAGKRAYLVGLCSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...CAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR GCA 90 bp TATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATCTGTCAGGGAAGTGTaGTCCAGCGCCATCCAGAGA +
Preference number: 2 (lower is better)
Translates to: YFCLLYSKHVILLTILPESVREV*SSAIQR
Trigger: TCTCTGGATGGCGCTGGAGCACACTTCCCTGACAGA...TTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR TCA 90 bp TATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAAGGCAGAGAGTTAAAGTaGGGGGCCAAACTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: YFCLLYSKHVILLTILPEGRELK*GAKLAE
Trigger: TTCTGCCAGTTTGGCCCCTCACTTTAACTCTCTGCC...TTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR GCA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACTTCTACTCACTATTCTaGCGGAATACATCTTCACAT +
Preference number: 2 (lower is better)
Translates to: TITTPHVPALVLELATEYFYSLF*RNTSSH
Trigger: ATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAA...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR CCA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 2 (lower is better)
Translates to: TITTPHVPALVLELATEYKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR CCA 90 bp TTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCCACACTAACCAATTCTaGTTACATACTTTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: FQTITTPHVPALVLELATHTNQF*LHTFLL
Trigger: TAGCAGGAAAGTATGTAACCAGAATTGGTTAGTGTG...GGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR GCA 90 bp TCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTTTCTACTCACTATTCTaGCGGAATACATCTTCACAT +
Preference number: 2 (lower is better)
Translates to: SSFQLLSDHHYSTCSCSCFYSLF*RNTSSH
Trigger: ATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAA...ACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR CCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACACCACCACATTCTTCTTaGCTTCTATACCTGTCTGAT +
Preference number: 2 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTPPHSS*LLYLSD
Trigger: ATCAGACAGGTATAGAAGCCAAGAAGAATGTGGTGG...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR TCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTATCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVSETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
3UTR-3UTR TCA 90 bp CATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: HVILLTILPEYIFTFQTGSETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...TCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
3UTR-3UTR CCA 90 bp GCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 2 (lower is better)
Translates to: ACHSTHYSAGIHLHISNWKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...CCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
3UTR-3UTR CCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAACAGTCACTACCGTTTaGGTTCAGAAAATCCATAAG +
Preference number: 2 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTTVTTV*VQKIHK
Trigger: CTTATGGATTTTCTGAACCCAAACGGTAGTGACTGT...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR TCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGTCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: VQQMILLICLKFQVNTSLSETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
3UTR-3UTR TCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYSETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
3UTR-3UTR CCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 2 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
3UTR-3UTR TCA 90 bp AATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATTCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 2 (lower is better)
Translates to: NDSFNLPEVSSQHVTGENSETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...ATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
3UTR-3UTR TCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYCSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
3UTR-3UTR TCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAATGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: QVNTSLEKMYETVALISECSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
3UTR GCA 72 bp TTGGGTGTCCAGCCCCAGCACCGCATTGGCCTCTTCTaGTGCCCTGTCCTGGCCCATCGGGTCATGCAGGAG +
Preference number: 3 (lower is better)
Translates to: LGVQPQHRIGLF*CPVLAHRVMQE
Trigger: CTCCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCGGTGCTGGGGCTGGACACCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 72 bp CAGCGCCATCCAGAGAGAAAAGGCTCTCTCGGACGTTaGACCTTGAGTCCTCCGCTCCTCCAGCACCACAGG +
Preference number: 3 (lower is better)
Translates to: QRHPERKGSLGR*TLSPPLLQHHR
Trigger: CCTGTGGTGCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCTTTTCTCTCTGGATGGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR TCA 72 bp CGCTCCTCCAGCACCACAGGTGACGCCGCTAGGCTCTaGACTCACTTTGTCCTCAGCTTCCCCAGGAATCAC +
Preference number: 3 (lower is better)
Translates to: RSSSTTGDAARL*THFVLSFPRNH
Trigger: GTGATTCCTGGGGAAGCTGAGGACAAAGTGAGTTCAGAGCCTAGCGGCGTCACCTGTGGTGCTGGAGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR TCA 72 bp ATCCAGAGAGAAAAGGCTCTCTCGGACGTTGCACCTTaGGTCCTCCGCTCCTCCAGCACCACAGGTGACGCC +
Preference number: 3 (lower is better)
Translates to: IQREKALSDVAP*VLRSSSTTGDA
Trigger: GGCGTCACCTGTGGTGCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCTTTTCTCTCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR TCA 72 bp TCAGCTTCCCCAGGAATCACAGACAGCATCACCATGTaGTCGCCTTGGGTGTCCAGCCCCAGCACCGCATTG +
Preference number: 3 (lower is better)
Translates to: SASPGITDSITM*SPWVSSPSTAL
Trigger: CAATGCGGTGCTGGGGCTGGACACCCAAGGCGATCACATGGTGATGCTGTCTGTGATTCCTGGGGAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR CCA 72 bp GTCCTCTGTCGGGGCTGCGTCAGATTCCGCCACTTCTaGCTCTGTGTAATACTCCTCTTCTCTGTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: VLCRGCVRFRHF*LCVILLFSVRE
Trigger: TTCCCTGACAGAGAAGAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR CAA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACAGGCTCTCTCGGACGTaGCACCTTGAGTCCTCCGCT +
Preference number: 3 (lower is better)
Translates to: TITTPHVPALVLELATEYRLSRT*HLESSA
Trigger: AGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCT...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 72 bp CTCTGTGTAATACTCCTCTTCTCTGTCAGGGAAGTGTaGTCCAGCGCCATCCAGAGAGAAAAGGCTCTCTCG +
Preference number: 3 (lower is better)
Translates to: LCVILLFSVREV*SSAIQREKALS
Trigger: CGAGAGAGCCTTTTCTCTCTGGATGGCGCTGGAGCACACTTCCCTGACAGAGAAGAGGAGTATTACACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR CAA 90 bp TGGGAAGAGGGCCTATTTGGTCGGCTTGAGTTACCACCACATTCTTCTTGGCTTGGCTCTGAACTCACTTaGTCCTCAGCTTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: WEEGLFGRLELPPHSSWLGSELT*SSASPG
Trigger: TCCTGGGGAAGCTGAGGACAAAGTGAGTTCAGAGCC...AAGCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 72 bp CAGACTTTCAGTGTTATTGGAGTCCTCTGTCGGGGCTaGGTCAGATTCCGCCACTTCTGGCTCTGTGTAATA +
Preference number: 3 (lower is better)
Translates to: QTFSVIGVLCRG*VRFRHFWLCVI
Trigger: TATTACACAGAGCCAGAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGACTCCAATAACACTGAAAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR CCA 72 bp AGTTCACCTTTGGGGATTTCAGACTTTCAGTGTTATTaGAGTCCTCTGTCGGGGCTGCGTCAGATTCCGCCA +
Preference number: 3 (lower is better)
Translates to: SSPLGISDFQCY*SPLSGLRQIPP
Trigger: TGGCGGAATCTGACGCAGCCCCGACAGAGGACTCCAATAACACTGAAAGTCTGAAATCCCCAAAGGTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR-3UTR CAA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCACCATGTGATCGCCTaGGGTGTCCAGCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: ESYFCLLYSKHVILLTILHHVIA*GVQPQH
Trigger: GTGCTGGGGCTGGACACCCAAGGCGATCACATGGTG...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR GCA 72 bp CAACTTCTTTCAGACCATCACTACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGCCACCGAATACTCTCA +
Preference number: 3 (lower is better)
Translates to: QLLSDHHYSTCS*SCPGISHRILS
Trigger: TGAGAGTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR CCA 72 bp ATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTaGGAAGAGGGCCTATTTGGTCGGCTTGAGTTACCA +
Preference number: 3 (lower is better)
Translates to: IQATSPHFLSKC*EEGLFGRLELP
Trigger: TGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR GCA 72 bp AAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTTGGTCGGCTTGAGTTA +
Preference number: 3 (lower is better)
Translates to: KIQATSPHFLSK*WEEGLFGRLEL
Trigger: TAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR-3UTR CAA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACACTTATTTTCCATCACTaGCTACTTGAGGGGGTCACA +
Preference number: 3 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTLIFHH*LLEGVT
Trigger: TGTGACCCCCTCAAGTAGCAAGTGATGGAAAATAAG...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
3UTR CCA 72 bp AAATCCCAGCTTCATCAACTTACAATCTGTGTAACCTaGGCAAGTTATCTAACTCTCTATGCCTCAATTTGC +
Preference number: 3 (lower is better)
Translates to: KSQLHQLTICVT*ASYLTLYASIC
Trigger: GCAAATTGAGGCATAGAGAGTTAGATAACTTGCCCAGGTTACACAGATTGTAAGTTGATGAAGCTGGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
3UTR TCA 72 bp CCCATTCATTGTAACACTCTAAGAAGGAGACTCATCTaGGGTTTTATTTCTATAGAATTTAGGGTGCCTTGT +
Preference number: 3 (lower is better)
Translates to: PIHCNTLRRRLI*GFISIEFRVPC
Trigger: ACAAGGCACCCTAAATTCTATAGAAATAAAACCTCAGATGAGTCTCCTTCTTAGAGTGTTACAATGAATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp GGCTGCGTCAGATTCCGCCACTTCTGGCTCTGTGTAATACTCCTCTTCTCTGTCAGCCGAGGAGCCGCATaGCGCGGGGCGGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: GCVRFRHFWLCVILLFSVSRGAA*RGAVVD
Trigger: GTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCT...GACAGAGAAGAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCTGACGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
3UTR CAA 72 bp CCAGCGCCATCCAGAGAGAAAAGGCTCTCTCGGACGTaGCACCTTGAGTCCTCCGCTCCTCCAGCACCACAG +
Preference number: 4 (lower is better)
Translates to: PAPSREKRLSRT*HLESSAPPAPQ
Trigger: CTGTGGTGCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCTTTTCTCTCTGGATGGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR GCA 90 bp GCTGAGATGCATCCAGTGCCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGGGCAGCCGGGACCATTaGCCAGGCCGAGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: AEMHPVPKSEELEMPGAEGSRDH*PGREAI
Trigger: GATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCC...CTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTGGATGCATCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR CCA 90 bp CAGTGCCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGAGTTAAAGTGAGGGCCCCAGCACCGCATTaGCCTCTTCTGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QCQKVKSWKCPGQRVKVRAPAPH*PLLLPC
Trigger: ACAGGGCAGCAGAAGAGGCCAATGCGGTGCTGGGGC...CCTCACTTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR GCA 90 bp TGGGAAGAGGGCCTATTTGGTCGGCTTGAGTTACCACCACATTCTTCTTGGCTTCGCATTGGCCTCTTCTaGTGCCCTGTCCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WEEGLFGRLELPPHSSWLRIGLF*CPVLAH
Trigger: ATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCG...AAGCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CCA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACTCTGCTGCCCTGTCCTaGCCCATCGGGTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: TITTPHVPALVLELATEYSAALS*PIGSCR
Trigger: CCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGA...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR TCA 90 bp CCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTTGGGCGGGTGGATCACCTaGAGTCAGCAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: PVHTFYQSAGKRAYLVGLGGWIT*SQQFET
Trigger: GGTCTCAAACTGCTGACTTCAGGTGATCCACCCGCC...CAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR TCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACAGCCGAGGAGCCGCATaGCGCGGGGCGGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYSRGAA*RGAVVD
Trigger: GTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCT...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGAGCCGAGGAGCCGCATaGCGCGGGGCGGTCGTCGAC +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMSRGAA*RGAVVD
Trigger: GTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCT...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp CCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATACCCACAGCAATACTTaGCACCAGCCGAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PTSFRPSLLHMFLLLSWNTHSNT*HQPRSR
Trigger: GCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGT...ATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511070.5
CDS-3UTR GCA 90 bp CTGAAACGAAGGATTGAAGTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTGGCAGCCGGGACCATTaGCCAGGCCGAGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: LKRRIEVPLSNFFQTITTGSRDH*PGREAI
Trigger: GATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCC...AGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp CATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATCGGACGTTGCACCTTaGGTCCTCCGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HVILLTILPEYIFTFQTGSDVAP*VLRSSS
Trigger: GCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGA...TCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAGGCAGCCGGGACCATTaGCCAGGCCGAGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: QMILLICLKFQVNTSLEKGSRDH*PGREAI
Trigger: GATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCC...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATGGCCCATCGGGTCATaGAGGAGCTCCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTWPIGS*RSSSSP
Trigger: GGGTGAGGAGGAGCTCCTGCATGACCCGATGGGCCA...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTATGGCCCATCGGGTCATaGAGGAGCTCCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVWPIGS*RSSSSP
Trigger: GGGTGAGGAGGAGCTCCTGCATGACCCGATGGGCCA...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp TTGAGCTTTAGTTACAGCATTTCCTTTCTCCTAACATCTCCCTTACCCAGAAACGTCCTCTGTCGGGGCTaGGTCAGATTCCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: LSFSYSISFLLTSPLPRNVLCRG*VRFRHF
Trigger: GAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGAC...GTTTCTGGGTAAGGGAGATGTTAGGAGAAAGGAAATGCTGTAACTAAAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACAGGGTTTCACCAAGTTaGCCAGGCTGGTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TITTPHVPALVLELATEYRVSPS*PGWSQK
Trigger: CTTTTGAGACCAGCCTGGCCAACTTGGTGAAACCCT...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR TCA 90 bp GCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGGACGCCGCTAGGCTCTaGACTCACTTTGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ACHSTHYSAGIHLHISNWDAARL*THFVLS
Trigger: GCTGAGGACAAAGTGAGTTCAGAGCCTAGCGGCGTC...CCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR TCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTCGGACGTTGCACCTTaGGTCCTCCGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMSDVAP*VLRSSS
Trigger: GCTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGA...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR TCA 90 bp GTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGAAAGGCTGCTGTGCTaGGATGCATCCAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VPLSNFFQTITTPHVPALERLLC*DASSAK
Trigger: TTTGGCACTGGATGCATCTCAGCACAGCAGCCTTTC...AAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAATGGCCCATCGGGTCATaGAGGAGCTCCTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISEWPIGS*RSSSSP
Trigger: GGGTGAGGAGGAGCTCCTGCATGACCCGATGGGCCA...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAGGCTCTCTCGGACGTTaGACCTTGAGTCCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTGSLGR*TLSPPL
Trigger: GAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCC...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAGTCCTCTGTCGGGGCTaGGTCAGATTCCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALVLCRG*VRFRHF
Trigger: GAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGAC...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTCTGCTGCCCTGTCCTaGCCCATCGGGTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYSAALS*PIGSCR
Trigger: CCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGA...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTTCTGCTGCCCTGTCCTaGCCCATCGGGTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETSAALS*PIGSCR
Trigger: CCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGA...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp AAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGCCCCAGCACCGCATTaGCCTCTTCTGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KHVILLTILPEYIFTFQTAPAPH*PLLLPC
Trigger: ACAGGGCAGCAGAAGAGGCCAATGCGGTGCTGGGGC...AGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR TCA 90 bp AAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTAGGCAGAGAGTTAAAGTaGGGGGCCAAACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KIQATSPHFLSKCWEEGLGRELK*GAKLAE
Trigger: TTCTGCCAGTTTGGCCCCTCACTTTAACTCTCTGCC...TAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAGGCGGGTGGATCACCTaGAGTCAGCAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALGGWIT*SQQFET
Trigger: GGTCTCAAACTGCTGACTTCAGGTGATCCACCCGCC...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAACGCATTGGCCTCTTCTaGTGCCCTGTCCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QMILLICLKFQVNTSLEKRIGLF*CPVLAH
Trigger: ATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCG...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTCGCATTGGCCTCTTCTaGTGCCCTGTCCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETRIGLF*CPVLAH
Trigger: ATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCG...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp AATAAGGAAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGCTCTCTCGGACGTTaGACCTTGAGTCCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: NKENTSNQSTLFIKVLGRGSLGR*TLSPPL
Trigger: GAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCC...TCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTTCCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR GCA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCGGCTCTCTCGGACGTTaGACCTTGAGTCCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFGSLGR*TLSPPL
Trigger: GAGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCC...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGTCCTCTGTCGGGGCTaGGTCAGATTCCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: VQQMILLICLKFQVNTSLVLCRG*VRFRHF
Trigger: GAAGTGGCGGAATCTGACGCAGCCCCGACAGAGGAC...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp TCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTGCTGCTGTGCTGAGATaGATCCAGTGCCAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSFQLLSDHHYSTCSCSCAAVLR*IQCQKV
Trigger: CACTTTTTGGCACTGGATGCATCTCAGCACAGCAGC...ACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp TTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCTACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: FQTITTPHVPALVLELATYSTCS*SCPGIS
Trigger: GCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTA...GGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR CCA 90 bp GTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGACTTTCAGTGTTATTaGAGTCCTCTGTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPLSNFFQTITTPHVPALDFQCY*SPLSGL
Trigger: CAGCCCCGACAGAGGACTCCAATAACACTGAAAGTC...AAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAAGTGAGGGGCCAAACTaGCAGAAAAGCGGCACCACG +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVSEGPN*QKSGTT
Trigger: CGTGGTGCCGCTTTTCTGCCAGTTTGGCCCCTCACT...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAAGTGAGGGGCCAAACTaGCAGAAAAGCGGCACCACG +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALSEGPN*QKSGTT
Trigger: CGTGGTGCCGCTTTTCTGCCAGTTTGGCCCCTCACT...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
3UTR CAA 72 bp TATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTTCTTGGCTTCTATACC +
Preference number: 4 (lower is better)
Translates to: YQSAGKRAYLVG*SYHHILLGFYT
Trigger: GGTATAGAAGCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
3UTR CAA 72 bp CACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCACCACATTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HTFYQSAGKRAY*VGLSYHHILLG
Trigger: GCCAAGAAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp AAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGACGCCGCTAGGCTCTaGACTCACTTTGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KHVILLTILPEYIFTFQTDAARL*THFVLS
Trigger: GCTGAGGACAAAGTGAGTTCAGAGCCTAGCGGCGTC...AGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR TCA 90 bp CCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTTGAGTGTTCGATCTGTATaGTTAAATCTGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: PVHTFYQSAGKRAYLVGLSVRSV*LNLAIG
Trigger: ACCAATGGCCAGATTTAATCATACAGATCGAACACT...CAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp AAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTACCCACAGCAATACTTaGCACCAGCCGAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KFQVNTSLEKMYETVALITHSNT*HQPRSR
Trigger: GCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGT...AATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000511070.5
CDS-3UTR GCA 90 bp CCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTTGCACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTT +
Preference number: 4 (lower is better)
Translates to: PVHTFYQSAGKRAYLVGLHFLSK*WEEGLF
Trigger: AAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTG...CAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTAACTCTCTGCTGTCCTaGCTCCATCCAGGACACCCC +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETNSLLS*LHPGHP
Trigger: GGGGTGTCCTGGATGGAGGCAGGACAGCAGAGAGTT...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508779.1
CDS-3UTR CCA 90 bp AGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAAGTGAGGGGCCAAACTaGCAGAAAAGCGGCACCACG +
Preference number: 4 (lower is better)
Translates to: SKHVILLTILPEYIFTFQSEGPN*QKSGTT
Trigger: CGTGGTGCCGCTTTTCTGCCAGTTTGGCCCCTCACT...TTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp CAGTGCCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGAGTTAAAGTGAGGCACACTAACCAATTCTaGTTACATACTTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: QCQKVKSWKCPGQRVKVRHTNQF*LHTFLL
Trigger: TAGCAGGAAAGTATGTAACCAGAATTGGTTAGTGTG...CCTCACTTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CCA 90 bp CAGTGCCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGAGTTAAAGTGAGGACTAGAATCAACTTGTaGGCAAGAACAGTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: QCQKVKSWKCPGQRVKVRTRINL*ARTVFY
Trigger: GTAAAACACTGTTCTTGCCCACAAGTTGATTCTAGT...CCTCACTTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR TCA 90 bp ATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTGACAGCATCACCATGTaGTCGCCTTGGGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILLTILPEYIFTFQTGLLDSITM*SPWVSS
Trigger: GCTGGACACCCAAGGCGATCACATGGTGATGCTGTC...AAGTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR TCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAGGCAGAGAGTTAAAGTaGGGGGCCAAACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTGRELK*GAKLAE
Trigger: TTCTGCCAGTTTGGCCCCTCACTTTAACTCTCTGCC...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAGAAAGGCTGCTGTGCTaGGATGCATCCAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTERLLC*DASSAK
Trigger: TTTGGCACTGGATGCATCTCAGCACAGCAGCCTTTC...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACTCTCAGTTCGAATCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: PHVPALVLELATEYSQFESETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...TTCGAACTGAGAGTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTACTGAAGTCAGCAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALLKSAV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTGCTGACTTCAG...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTACCAAACCTGCTGTGCTaGGATGCATCCAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVPNLLC*DASSAK
Trigger: TTTGGCACTGGATGCATCTCAGCACAGCAGGTTTGG...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509954.1
CDS-3UTR GCA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTTCTGTCAGGGAAGTGTaGTCCAGCGCCATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CHSTHYSAGIHLHISNWISVREV*SSAIQR
Trigger: TCTCTGGATGGCGCTGGAGCACACTTCCCTGACAGA...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTCTGTCAGGGAAGTGTaGTCCAGCGCCATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMSVREV*SSAIQR
Trigger: TCTCTGGATGGCGCTGGAGCACACTTCCCTGACAGA...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp TTGAGCTTTAGTTACAGCATTTCCTTTCTCCTAACATCTCCCTTACCCAGAAACGTGAAGAGCTGGAAATaGCCGGGGCAGAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LSFSYSISFLLTSPLPRNVKSWK*PGQRVK
Trigger: TTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCAC...GTTTCTGGGTAAGGGAGATGTTAGGAGAAAGGAAATGCTGTAACTAAAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACACCACTGCGCCCAGCCTaGTGGGAACATTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTPLRPA*WEHFKV
Trigger: AACCTTAAAATGTTCCCAGCAGGCTGGGCGCAGTGG...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTATTGCACAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALLHRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGTGCAA...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp AAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTAGTGAGGGGCCAAACTaGCAGAAAAGCGGCACCACG +
Preference number: 4 (lower is better)
Translates to: KFQVNTSLEKMYETVALISEGPN*QKSGTT
Trigger: CGTGGTGCCGCTTTTCTGCCAGTTTGGCCCCTCACT...AATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp GCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGCAAAAAGTGAAGAGCTaGAAATGCCCGGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ACHSTHYSAGIHLHISNWQKVKS*KCPGQR
Trigger: TCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTG...CCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAAGGCAGAGAGTTAAAGTaGGGGGCCAAACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISEGRELK*GAKLAE
Trigger: TTCTGCCAGTTTGGCCCCTCACTTTAACTCTCTGCC...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAAAGGCTGCTGTGCTaGGATGCATCCAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VQQMILLICLKFQVNTSLERLLC*DASSAK
Trigger: TTTGGCACTGGATGCATCTCAGCACAGCAGCCTTTC...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAACCTCCCGGGTTCAAGTaGTTCTCATGCCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISEPPGFK*FSCLSF
Trigger: AAAGCTGAGGCATGAGAATCACTTGAACCCGGGAGG...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCTCCCGGGTTCAAGTaGTTCTCATGCCTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: ESYFCLLYSKHVILLTILPPGFK*FSCLSF
Trigger: AAAGCTGAGGCATGAGAATCACTTGAACCCGGGAGG...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACCTGAAGTCAGCAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYLKSAV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTGCTGACTTCAG...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTTCTGTCAGGGAAGTGTaGTCCAGCGCCATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISSVREV*SSAIQR
Trigger: TCTCTGGATGGCGCTGGAGCACACTTCCCTGACAGA...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR GCA 90 bp CCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACTCTCAGTTCGAATTCTACTCACTATTCTaGCGGAATACATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: PHVPALVLELATEYSQFEFYSLF*RNTSSH
Trigger: ATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAA...TTCGAACTGAGAGTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTGCACAGGCTGGAGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYLHRLE*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACTCCAGCCTGTGCAA...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGACTTTCAGTGTTATTaGAGTCCTCTGTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVDFQCY*SPLSGL
Trigger: CAGCCCCGACAGAGGACTCCAATAACACTGAAAGTC...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTACAAAAAGTGAAGAGCTaGAAATGCCCGGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALQKVKS*KCPGQR
Trigger: TCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTG...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTACTGCGCCCAGCCTGCTaGGAACATTTTAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALLRPAC*EHFKVQ
Trigger: TTGAACCTTAAAATGTTCCCAGCAGGCTGGGCGCAG...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp CATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGACTGCGCCCAGCCTGCTaGGAACATTTTAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: HVILLTILPEYIFTFQTGLRPAC*EHFKVQ
Trigger: TTGAACCTTAAAATGTTCCCAGCAGGCTGGGCGCAG...TCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAAGGGTTTCACCAAGTTaGCCAGGCTGGTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVRVSPS*PGWSQK
Trigger: CTTTTGAGACCAGCCTGGCCAACTTGGTGAAACCCT...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp ATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTGGCAGAGAGTTAAAGTaGGGGGCCAAACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ILLTILPEYIFTFQTGLLGRELK*GAKLAE
Trigger: TTCTGCCAGTTTGGCCCCTCACTTTAACTCTCTGCC...AAGTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp AATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGAAAGGCTGCTGTGCTaGGATGCATCCAGTGCCAAA +
Preference number: 4 (lower is better)
Translates to: NDSFNLPEVSSQHVTGENERLLC*DASSAK
Trigger: TTTGGCACTGGATGCATCTCAGCACAGCAGCCTTTC...ATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PTSFRPSLLHMFLLLSWNCSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...ATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGAATAATGTGCCATTCTaGGATACGGTCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESYFCLLYSKHVILLTILNNVPF*DTVPSC
Trigger: GCAGGAGGGGACCGTATCTCAGAATGGCACATTATT...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCAATAATGTGCCATTCTaGGATACGGTCCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFNNVPF*DTVPSC
Trigger: GCAGGAGGGGACCGTATCTCAGAATGGCACATTATT...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTGAAGAGCTGGAAATaGCCGGGGCAGAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETVKSWK*PGQRVK
Trigger: TTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCAC...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGGCTGCTGTGCTGAGATaGATCCAGTGCCAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ESYFCLLYSKHVILLTILAAVLR*IQCQKV
Trigger: CACTTTTTGGCACTGGATGCATCTCAGCACAGCAGC...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGGCTGCTGTGCTGAGATaGATCCAGTGCCAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMAAVLR*IQCQKV
Trigger: CACTTTTTGGCACTGGATGCATCTCAGCACAGCAGC...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACGCTGCTGTGCTGAGATaGATCCAGTGCCAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYAAVLR*IQCQKV
Trigger: CACTTTTTGGCACTGGATGCATCTCAGCACAGCAGC...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp AAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTCCACTGCGCCCAGCCTaGTGGGAACATTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: KFQVNTSLEKMYETVALIPLRPA*WEHFKV
Trigger: AACCTTAAAATGTTCCCAGCAGGCTGGGCGCAGTGG...AATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTCTACGGTGCCAAACCTaGTGTGCTGAGATGCATCCA +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISLRCQT*CAEMHP
Trigger: TGGATGCATCTCAGCACAGCAGGTTTGGCACCGTAG...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509954.1
CDS-3UTR GCA 90 bp AAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGCGACCACTTTCCTCTaGAACCTTCTCCACAACTCT +
Preference number: 4 (lower is better)
Translates to: KHVILLTILPEYIFTFQTATTFL*NLLHNS
Trigger: AGAGTTGTGGAGAAGGTTGCAGAGGAAAGTGGTCGC...AGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508779.1
CDS-3UTR CCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAAGATTCCGCCACTTCTaGCTCTGTGTAATACTCCTC +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVRFRHF*LCVILL
Trigger: GAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCT...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGACTTTCAGTGTTATTaGAGTCCTCTGTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETDFQCY*SPLSGL
Trigger: CAGCCCCGACAGAGGACTCCAATAACACTGAAAGTC...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp TATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAACAAAAAGTGAAGAGCTaGAAATGCCCGGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: YFCLLYSKHVILLTILPEQKVKS*KCPGQR
Trigger: TCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTG...TTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTCAAAAAGTGAAGAGCTaGAAATGCCCGGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CHSTHYSAGIHLHISNWIQKVKS*KCPGQR
Trigger: TCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTG...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp CCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 4 (lower is better)
Translates to: PTSFRPSLLHMFLLLSWNKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...ATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR GCA 90 bp AAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTGTGAAGAGCTGGAAATaGCCGGGGCAGAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: KFQVNTSLEKMYETVALIVKSWK*PGQRVK
Trigger: TTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCAC...AATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGTGAAGAGCTGGAAATaGCCGGGGCAGAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISVKSWK*PGQRVK
Trigger: TTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCAC...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTATACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALYSTCS*SCPGIS
Trigger: GCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTA...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTAGATTCCGCCACTTCTaGCTCTGTGTAATACTCCTC +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETRFRHF*LCVILL
Trigger: GAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCT...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CCA 90 bp GTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 4 (lower is better)
Translates to: VPLSNFFQTITTPHVPALKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...AAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp CTGAAACGAAGGATTGAAGTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTTCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: LKRRIEVPLSNFFQTITTSETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...AGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR TCA 90 bp AAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTAATAAGTACACACATGTaGAGATTCAAATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KIQATSPHFLSKCWEEGLISTHM*RFKSQL
Trigger: AAGCTGGGATTTGAATCTTCACATGTGTGTACTTAT...TAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR GCA 90 bp GCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGCACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTT +
Preference number: 4 (lower is better)
Translates to: ACHSTHYSAGIHLHISNWHFLSK*WEEGLF
Trigger: AAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTG...CCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAATACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISEYSTCS*SCPGIS
Trigger: GCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTA...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR GCA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGTACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: ESYFCLLYSKHVILLTILYSTCS*SCPGIS
Trigger: GCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTA...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGTACTCCACATGTTCCTaGTCTTGTCCTGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: VQQMILLICLKFQVNTSLYSTCS*SCPGIS
Trigger: GCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTA...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTAGATTCCGCCACTTCTaGCTCTGTGTAATACTCCTC +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISRFRHF*LCVILL
Trigger: GAGGAGTATTACACAGAGCCAGAAGTGGCGGAATCT...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
3UTR CAA 72 bp CAAACATCAAGGTATTTGACTCTTATTTTCCATCACTaGCTACTTGAGGGGGTCACACTAACCAATTCTGGT +
Preference number: 4 (lower is better)
Translates to: QTSRYLTLIFHH*LLEGVTLTNSG
Trigger: ACCAGAATTGGTTAGTGTGACCCCCTCAAGTAGCAAGTGATGGAAAATAAGAGTCAAATACCTTGATGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAAGTGTTCGATCTGTATaGTTAAATCTGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALSVRSV*LNLAIG
Trigger: ACCAATGGCCAGATTTAATCATACAGATCGAACACT...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR GCA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTATTTTCCATCACTTaGTACTTGAGGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYLFSIT*YLRGSH
Trigger: GTGTGACCCCCTCAAGTAGCAAGTGATGGAAAATAA...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAATTATTTTCCATCACTTaGTACTTGAGGGGGTCACAC +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISELFSIT*YLRGSH
Trigger: GTGTGACCCCCTCAAGTAGCAAGTGATGGAAAATAA...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAACCACCACATTCTTCTTaGCTTCTATACCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISEPPHSS*LLYLSD
Trigger: ATCAGACAGGTATAGAAGCCAAGAAGAATGTGGTGG...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAACCACCACATTCTTCTTaGCTTCTATACCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: YFCLLYSKHVILLTILPEPPHSS*LLYLSD
Trigger: ATCAGACAGGTATAGAAGCCAAGAAGAATGTGGTGG...TTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp AGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAACCACCACATTCTTCTTaGCTTCTATACCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: SKHVILLTILPEYIFTFQPPHSS*LLYLSD
Trigger: ATCAGACAGGTATAGAAGCCAAGAAGAATGTGGTGG...TTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TTGAGCTTTAGTTACAGCATTTCCTTTCTCCTAACATCTCCCTTACCCAGAAACCATACTTTCCTGCTATaGACTCTAGAAGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: LSFSYSISFLLTSPLPRNHTFLL*TLEEKL
Trigger: CAGTTTTTCTTCTAGAGTCCATAGCAGGAAAGTATG...GTTTCTGGGTAAGGGAGATGTTAGGAGAAAGGAAATGCTGTAACTAAAGCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAACAATCTGTGTAACCTaGGCAAGTTATCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALTICVT*ASYLTL
Trigger: GAGAGTTAGATAACTTGCCCAGGTTACACAGATTGT...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCAGTGTTCGATCTGTATaGTTAAATCTGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFSVRSV*LNLAIG
Trigger: ACCAATGGCCAGATTTAATCATACAGATCGAACACT...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAAGTGTTCGATCTGTATaGTTAAATCTGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: QMILLICLKFQVNTSLEKSVRSV*LNLAIG
Trigger: ACCAATGGCCAGATTTAATCATACAGATCGAACACT...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR TCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGAGTGTTCGATCTGTATaGTTAAATCTGGCCATTGGT +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMSVRSV*LNLAIG
Trigger: ACCAATGGCCAGATTTAATCATACAGATCGAACACT...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR TCA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTTCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: CHSTHYSAGIHLHISNWISETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGAATCTGAAACGAAGGATTaGAGTTCCTCTTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: QVNTSLEKMYETVALISESETKD*SSSFQL
Trigger: AAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAGA...TTCAGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR TCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTATGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVCSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR TCA 90 bp CATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HVILLTILPEYIFTFQTGCSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...TCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTACAGCTGTTGGAAACATaGCACATAAAAGTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVQLLET*HIKVVN
Trigger: GTTTACAACTTTTATGTGTCATGTTTCCAACAGCTG...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTCACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTT +
Preference number: 4 (lower is better)
Translates to: CHSTHYSAGIHLHISNWIHFLSK*WEEGLF
Trigger: AAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTG...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATTCTACTCACTATTCTaGCGGAATACATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTFYSLF*RNTSSH
Trigger: ATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAA...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR GCA 90 bp TTGAGCTTTAGTTACAGCATTTCCTTTCTCCTAACATCTCCCTTACCCAGAAACGGTTCAATTAATGCATaGTGCTTAGGTAACTATGAT +
Preference number: 4 (lower is better)
Translates to: LSFSYSISFLLTSPLPRNGSINA*CLGNYD
Trigger: ATCATAGTTACCTAAGCAGCATGCATTAATTGAACC...GTTTCTGGGTAAGGGAGATGTTAGGAGAAAGGAAATGCTGTAACTAAAGCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGACAGTCACTACCGTTTaGGTTCAGAAAATCCATAAG +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMTVTTV*VQKIHK
Trigger: CTTATGGATTTTCTGAACCCAAACGGTAGTGACTGT...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAACAGTCACTACCGTTTaGGTTCAGAAAATCCATAAG +
Preference number: 4 (lower is better)
Translates to: QMILLICLKFQVNTSLEKTVTTV*VQKIHK
Trigger: CTTATGGATTTTCTGAACCCAAACGGTAGTGACTGT...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCACAGTCACTACCGTTTaGGTTCAGAAAATCCATAAG +
Preference number: 4 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFTVTTV*VQKIHK
Trigger: CTTATGGATTTTCTGAACCCAAACGGTAGTGACTGT...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTCCACCACATTCTTCTTaGCTTCTATACCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISPPHSS*LLYLSD
Trigger: ATCAGACAGGTATAGAAGCCAAGAAGAATGTGGTGG...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTACATACTTTCCTGCTATaGACTCTAGAAGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: LKFQVNTSLEKMYETVALHTFLL*TLEEKL
Trigger: CAGTTTTTCTTCTAGAGTCCATAGCAGGAAAGTATG...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp TATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAAACAATCTGTGTAACCTaGGCAAGTTATCTAACTCTC +
Preference number: 4 (lower is better)
Translates to: YFCLLYSKHVILLTILPETICVT*ASYLTL
Trigger: GAGAGTTAGATAACTTGCCCAGGTTACACAGATTGT...TTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGCAGCTGTTGGAAACATaGCACATAAAAGTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: VQQMILLICLKFQVNTSLQLLET*HIKVVN
Trigger: GTTTACAACTTTTATGTGTCATGTTTCCAACAGCTG...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp AATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATCACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTT +
Preference number: 4 (lower is better)
Translates to: NDSFNLPEVSSQHVTGENHFLSK*WEEGLF
Trigger: AAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTG...ATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR GCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTCACTTTTTATCAAAGTaGTGGGAAGAGGGCCTATTT +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISHFLSK*WEEGLF
Trigger: AAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTG...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR GCA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTTCTACTCACTATTCTaGCGGAATACATCTTCACAT +
Preference number: 4 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFFYSLF*RNTSSH
Trigger: ATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAA...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TGTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTACAGTCACTACCGTTTaGGTTCAGAAAATCCATAAG +
Preference number: 4 (lower is better)
Translates to: CSTNDSFNLPEVSSQHVTTVTTV*VQKIHK
Trigger: CTTATGGATTTTCTGAACCCAAACGGTAGTGACTGT...AGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 4 (lower is better)
Translates to: VQQMILLICLKFQVNTSLKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCCACACTAACCAATTCTaGTTACATACTTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFHTNQF*LHTFLL
Trigger: TAGCAGGAAAGTATGTAACCAGAATTGGTTAGTGTG...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR TCA 90 bp ATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTTGTAGCACTAATTTCTaGAACGAAGGATTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ILLTILPEYIFTFQTGLLCSTNF*NEGLKF
Trigger: GAACTTCAATCCTTCGTTTCAGAAATTAGTGCTACA...AAGTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR TCA 90 bp ATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTATAAGTACACACATGTaGAGATTCAAATCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ILLTILPEYIFTFQTGLLISTHM*RFKSQL
Trigger: AAGCTGGGATTTGAATCTTCACATGTGTGTACTTAT...AAGTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp AGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAGGTTCAATTAATGCATaGTGCTTAGGTAACTATGAT +
Preference number: 4 (lower is better)
Translates to: SKHVILLTILPEYIFTFQGSINA*CLGNYD
Trigger: ATCATAGTTACCTAAGCAGCATGCATTAATTGAACC...TTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp GTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGAAAATAGAAATAATGTaGCATTCTGAGATACGGTCC +
Preference number: 4 (lower is better)
Translates to: VQQMILLICLKFQVNTSLKIEIM*HSEIRS
Trigger: GGACCGTATCTCAGAATGGCACATTATTTCTATTTT...CAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAAAAATAGAAATAATGTaGCATTCTGAGATACGGTCC +
Preference number: 4 (lower is better)
Translates to: QMILLICLKFQVNTSLEKKIEIM*HSEIRS
Trigger: GGACCGTATCTCAGAATGGCACATTATTTCTATTTT...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTTATCTAACTCTCTATaGCTCAATTTGCTCATGTGT +
Preference number: 4 (lower is better)
Translates to: MILLICLKFQVNTSLEKMLSNSL*LNLLMC
Trigger: ACACATGAGCAAATTGAGGCATAGAGAGTTAGATAA...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR GCA 90 bp TTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTTTATCTAACTCTCTATaGCTCAATTTGCTCATGTGT +
Preference number: 4 (lower is better)
Translates to: LICLKFQVNTSLEKMYETLSNSL*LNLLMC
Trigger: ACACATGAGCAAATTGAGGCATAGAGAGTTAGATAA...AGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CCA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 4 (lower is better)
Translates to: FQVNTSLEKMYETVALISKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TGTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTAAGTCAACACGTCACTaGAGAAAATGTATGAAACTG +
Preference number: 4 (lower is better)
Translates to: CSTNDSFNLPEVSSQHVTKSTRH*RKCMKL
Trigger: CAGTTTCATACATTTTCTCCAGTGACGTGTTGACTT...AGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CCA 90 bp TGTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTACTAGAATCAACTTGTaGGCAAGAACAGTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: CSTNDSFNLPEVSSQHVTTRINL*ARTVFY
Trigger: GTAAAACACTGTTCTTGCCCACAAGTTGATTCTAGT...AGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS GCA 90 bp GAGCCGCATGACGCGGGGCGGTCGTCGACCGGCAGCCGGGACCATTaGCCAGGCCGAGAGGCAATCGGCGCACGGCTACGCGAGTCGTGC +
Preference number: 5 (lower is better)
Translates to: EPHDAGRSSTGSRDH*PGREAIGARLRESC
Trigger: GCACGACTCGCGTAGCCGTGCGCCGATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCCGGTCGACGACCGCCCCGCGTCATGCGGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000506916.1
ENST00000511070.5
CDS GCA 90 bp CCCTCCACGCCGCGGACGGGAAGTCCCAGCACCCACAGCAATACTTaGCACCAGCCGAGGAGCCGCATGACGCGGGGCGGTCGTCGACCG +
Preference number: 5 (lower is better)
Translates to: PSTPRTGSPSTHSNT*HQPRSRMTRGGRRP
Trigger: CGGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGACTTCCCGTCCGCGGCGTGGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511070.5
CDS TCA 90 bp GTCCCAGCACCCACAGCAATACTTGCCACCAGCCGAGGAGCCGCATaGCGCGGGGCGGTCGTCGACCGGCAGCCGGGACCATTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VPAPTAILATSRGAA*RGAVVDRQPGPLPR
Trigger: CCTGGGCAATGGTCCCGGCTGCCGGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000506916.1
ENST00000511070.5
CDS GCA 90 bp ACCTCCACGCCGCGGACGGGAAGTCCCAGCACCCACAGCAATACTTaGCACCAGCCGAGGAGCCGCATGACGCGGGGCGGTCGTCGACCG +
Preference number: 5 (lower is better)
Translates to: TSTPRTGSPSTHSNT*HQPRSRMTRGGRRP
Trigger: CGGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGACTTCCCGTCCGCGGCGTGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358387.9
CDS GCA 90 bp TCCTCCACGCCGCGGACGGGAAGTCCCAGCACCCACAGCAATACTTaGCACCAGCCGAGGAGCCGCATGACGCGGGGCGGTCGTCGACCG +
Preference number: 5 (lower is better)
Translates to: SSTPRTGSPSTHSNT*HQPRSRMTRGGRRP
Trigger: CGGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGACTTCCCGTCCGCGGCGTGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506916.1
CDS CCA 90 bp GTGTCCAGCCCCAGCACCGCATTGGCCTCTTCTGCTGCCCTGTCCTaGCCCATCGGGTCATGCAGGAGCTCCTCCTCACCCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: VSSPSTALASSAALS*PIGSCRSSSSPRYT
Trigger: TGTGTACCTGGGTGAGGAGGAGCTCCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCGGTGCTGGGGCTGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000506916.1
ENST00000507024.5
ENST00000508779.1
ENST00000508810.1
CDS-3UTR CAA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACCGGCAGCCGGGACCATaGCCCAGGCCGAGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: TITTPHVPALVLELATEYRQPGP*PRPRGN
Trigger: ATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCCG...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR CAA 90 bp CCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTTGGTCGGCTTGCACCCACAGCAATACTaGCCACCAGCCGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PVHTFYQSAGKRAYLVGLHPQQY*PPAEEP
Trigger: CGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTG...CAAGCCGACCAAATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511070.5
CDS-3UTR CAA 90 bp CAGTGCCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGAGTTAAAGTGAGGGGCTCTGAACTCACTTaGTCCTCAGCTTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: QCQKVKSWKCPGQRVKVRGSELT*SSASPG
Trigger: TCCTGGGGAAGCTGAGGACAAAGTGAGTTCAGAGCC...CCTCACTTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CAA 90 bp CCAACTTCTTTCAGACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATCTCGGACGTTGCACCTaGAGTCCTCCGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PTSFRPSLLHMFLLLSWNLGRCT*SPPLLQ
Trigger: CTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAG...ATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGTCTGAAAGAAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CAA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTACGGCAGCCGGGACCATaGCCCAGGCCGAGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LKFQVNTSLEKMYETVALRQPGP*PRPRGN
Trigger: ATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCCG...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000511070.5
CDS-3UTR CAA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTCGGCAGCCGGGACCATaGCCCAGGCCGAGAGGCAAT +
Preference number: 5 (lower is better)
Translates to: CHSTHYSAGIHLHISNWIRQPGP*PRPRGN
Trigger: ATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCCG...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000511070.5
CDS-3UTR CAA 90 bp CAGTGCCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGAGTTAAAGTGAGGCCTCACAGTTCACCTTaGGGGATTTCAGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: QCQKVKSWKCPGQRVKVRPHSSP*GISDFQ
Trigger: CTGAAAGTCTGAAATCCCCAAAGGTGAACTGTGAGG...CCTCACTTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CAA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTACACCATGTGATCGCCTaGGGTGTCCAGCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LKFQVNTSLEKMYETVALHHVIA*GVQPQH
Trigger: GTGCTGGGGCTGGACACCCAAGGCGATCACATGGTG...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp ATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTACACCATGTGATCGCCTaGGGTGTCCAGCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ICLKFQVNTSLEKMYETVHHVIA*GVQPQH
Trigger: GTGCTGGGGCTGGACACCCAAGGCGATCACATGGTG...TACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp CATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGACTCGGACGTTGCACCTaGAGTCCTCCGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: HVILLTILPEYIFTFQTGLGRCT*SPPLLQ
Trigger: CTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAG...TCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS GCA 90 bp ATTCCACTAGTTAAGTTCCTGTCTGCTGTGCTGAGATGCATCCAGTaGCAAAAAGTGAAGAGCTGGAAATGCCCGGGGCAGAGAGTTAAA +
Preference number: 5 (lower is better)
Translates to: IPLVKFLSAVLRCIQ*QKVKSWKCPGQRVK
Trigger: TTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCACTTTTTGGCACTGGATGCATCTCAGCACAGCAGACAGGAACTTAACTAGTGGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506350.1
CDS-3UTR CAA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCCACCCACAGCAATACTaGCCACCAGCCGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFHPQQY*PPAEEP
Trigger: CGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTG...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000511070.5
CDS-3UTR CAA 90 bp ATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGCTCGGACGTTGCACCTaGAGTCCTCCGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: MILLICLKFQVNTSLEKMLGRCT*SPPLLQ
Trigger: CTGGAGGAGCGGAGGACTCAAGGTGCAACGTCCGAG...CATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAAGGCTCTCTCGGACGTaGCACCTTGAGTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTRLSRT*HLESSA
Trigger: AGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCT...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp CATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGAAGGCTCTCTCGGACGTaGCACCTTGAGTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: HVILLTILPEYIFTFQTGRLSRT*HLESSA
Trigger: AGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCT...TCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp ACCATCACTACTCCACATGTTCCTGCTCTTGTCCTGGAATTAGCCACCGAATACGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTT +
Preference number: 5 (lower is better)
Translates to: TITTPHVPALVLELATEYAYLVG*SYHHIL
Trigger: AAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGC...GTATTCGGTGGCTAATTCCAGGACAAGAGCAGGAACATGTGGAGTAGTGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS CCA 90 bp GCTGAGAGAGGTGAGGAAACTGCAGAGGAAAAGTCTGAAATTAGCTaGGGTTGGCTCATGAGGTTTAAGAAAGAAGCTGTCTCCAGAACA +
Preference number: 5 (lower is better)
Translates to: AERGEETAEEKSEIS*GWLMRFKKEAVSRT
Trigger: TGTTCTGGAGACAGCTTCTTTCTTAAACCTCATGAGCCAACCCCAGCTAATTTCAGACTTTTCCTCTGCAGTTTCCTCACCTCTCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS-3UTR CAA 90 bp AAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTCACCATGTGATCGCCTaGGGTGTCCAGCCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KFQVNTSLEKMYETVALIHHVIA*GVQPQH
Trigger: GTGCTGGGGCTGGACACCCAAGGCGATCACATGGTG...AATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp CTGAAACGAAGGATTGAAGTTCCTCTTTCCAACTTCTTTCAGACCATCACTACTGCCAAGATTGCACCATaGCACTCCAGCCTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: LKRRIEVPLSNFFQTITTAKIAP*HSSLGD
Trigger: GTCACCTAGGCTGGAGTGCAATGGTGCAATCTTGGC...AGTAGTGATGGTCTGAAAGAAGTTGGAAAGAGGAACTTCAATCCTTCGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CAA 90 bp TTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACAGGCTCTGAACTCACTTaGTCCTCAGCTTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: FAFCIVSMSFYSLFCRNTGSELT*SSASPG
Trigger: TCCTGGGGAAGCTGAGGACAAAGTGAGTTCAGAGCC...TGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp ATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTAGGCTCTCTCGGACGTaGCACCTTGAGTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: ILLTILPEYIFTFQTGLLRLSRT*HLESSA
Trigger: AGCGGAGGACTCAAGGTGCAACGTCCGAGAGAGCCT...AAGTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAGCCAAGATTGCACCATaGCACTCCAGCCTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: LKFQVNTSLEKMYETVALAKIAP*HSSLGD
Trigger: GTCACCTAGGCTGGAGTGCAATGGTGCAATCTTGGC...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CAA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGGGCTCTGAACTCACTTaGTCCTCAGCTTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ESYFCLLYSKHVILLTILGSELT*SSASPG
Trigger: TCCTGGGGAAGCTGAGGACAAAGTGAGTTCAGAGCC...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp AATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAGGGCCTATTGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTT +
Preference number: 5 (lower is better)
Translates to: NTSNQSTLFIKVLGRGPIAYLVG*SYHHIL
Trigger: AAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGC...AATAGGCCCTCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507024.5
ENST00000511070.5
CDS-3UTR CAA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: QMILLICLKFQVNTSLEKGKRAY*VGLSYH
Trigger: GTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCC...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CAA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAGAGGGTTTCACCAAGTaGGCCAGGCTGGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LKFQVNTSLEKMYETVALEGFTK*ARLVSK
Trigger: TTTTGAGACCAGCCTGGCCAACTTGGTGAAACCCTC...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CAA 90 bp GCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGCCTCACAGTTCACCTTaGGGGATTTCAGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: ACHSTHYSAGIHLHISNWPHSSP*GISDFQ
Trigger: CTGAAAGTCTGAAATCCCCAAAGGTGAACTGTGAGG...CCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp AATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: NDSFNLPEVSSQHVTGENGKRAY*VGLSYH
Trigger: GTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCC...ATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CAA 90 bp ATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACTTGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: ILLTILPEYIFTFQTGLLGKRAY*VGLSYH
Trigger: GTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCC...AAGTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CAA 90 bp TTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAATTTCTGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: FQVNTSLEKMYETVALISGKRAY*VGLSYH
Trigger: GTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCC...AGAAATTAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CAA 90 bp TGTTCAACAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGGAAGAGGGCCTATTaGGTCGGCTTGAGTTACCAC +
Preference number: 5 (lower is better)
Translates to: CSTNDSFNLPEVSSQHVTGKRAY*VGLSYH
Trigger: GTGGTAACTCAAGCCGACCAAATAGGCCCTCTTCCC...AGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTGTTGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CAA 90 bp TCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTACGAGGGTTTCACCAAGTaGGCCAGGCTGGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SFYSLFCRNTSSHFKLDYEGFTK*ARLVSK
Trigger: TTTTGAGACCAGCCTGGCCAACTTGGTGAAACCCTC...GTAATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CAA 90 bp TGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAACTGGATTAGACTTTCAGTGTTATaGGAGTCCTCTGTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: CHSTHYSAGIHLHISNWIRLSVL*ESSVGA
Trigger: AGCCCCGACAGAGGACTCCAATAACACTGAAAGTCT...AATCCAGTTTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp AATAAGGAAAATACAAGCAACCAGTCCACACTTTTTATCAAAGTGCTGGGAAGAAGACTTTCAGTGTTATaGGAGTCCTCTGTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: NKENTSNQSTLFIKVLGRRLSVL*ESSVGA
Trigger: AGCCCCGACAGAGGACTCCAATAACACTGAAAGTCT...TCTTCCCAGCACTTTGATAAAAAGTGTGGACTGGTTGCTTGTATTTTCCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS-3UTR CAA 90 bp CAAATGATTCTTTTAATCTGCCTGAAGTTTCAAGTCAACACGTCACTGGAGAAAAGACTTTCAGTGTTATaGGAGTCCTCTGTCGGGGCT +
Preference number: 5 (lower is better)
Translates to: QMILLICLKFQVNTSLEKRLSVL*ESSVGA
Trigger: AGCCCCGACAGAGGACTCCAATAACACTGAAAGTCT...TTTCTCCAGTGACGTGTTGACTTGAAACTTCAGGCAGATTAAAAGAATCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp CTGAAGTTTCAAGTCAACACGTCACTGGAGAAAATGTATGAAACTGTAGCACTAGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTT +
Preference number: 5 (lower is better)
Translates to: LKFQVNTSLEKMYETVALAYLVG*SYHHIL
Trigger: AAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGC...TAGTGCTACAGTTTCATACATTTTCTCCAGTGACGTGTTGACTTGAAACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000509954.1
ENST00000511070.5
CDS-3UTR CAA 90 bp AGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAACCTCACAGTTCACCTTaGGGGATTTCAGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: SKHVILLTILPEYIFTFQPHSSP*GISDFQ
Trigger: CTGAAAGTCTGAAATCCCCAAAGGTGAACTGTGAGG...TTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
CDS-3UTR CAA 90 bp AGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAAGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTT +
Preference number: 5 (lower is better)
Translates to: SKHVILLTILPEYIFTFQAYLVG*SYHHIL
Trigger: AAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGC...TTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CAA 90 bp GAGAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCGCCTATTTGGTCGGCTaGAGTTACCACCACATTCTT +
Preference number: 5 (lower is better)
Translates to: ESPIFAFCIVSMSFYSLFAYLVG*SYHHIL
Trigger: AAGAATGTGGTGGTAACTCAAGCCGACCAAATAGGC...GAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358387.9
ENST00000507024.5
ENST00000508779.1
ENST00000511070.5
CDS-3UTR CAA 90 bp AGTAAGCATGTCATTCTACTCACTATTCTGCCGGAATACATCTTCACATTTCAACTTATTTTCCATCACTaGCTACTTGAGGGGGTCACA +
Preference number: 5 (lower is better)
Translates to: SKHVILLTILPEYIFTFQLIFHH*LLEGVT
Trigger: TGTGACCCCCTCAAGTAGCAAGTGATGGAAAATAAG...TTGAAATGTGAAGATGTATTCCGGCAGAATAGTGAGTAGAATGACATGCTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS-3UTR CAA 90 bp GAGTCCTATTTTTGCCTTCTGTATAGTAAGCATGTCATTCTACTCACTATTCTGCTTATTTTCCATCACTaGCTACTTGAGGGGGTCACA +
Preference number: 5 (lower is better)
Translates to: ESYFCLLYSKHVILLTILLIFHH*LLEGVT
Trigger: TGTGACCCCCTCAAGTAGCAAGTGATGGAAAATAAG...CAGAATAGTGAGTAGAATGACATGCTTACTATACAGAAGGCAAAAATAGGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358387.9
ENST00000507024.5
CDS TCA 90 bp TTGAAATTAGGTGAATTAATAACCCTACAGTGGCCTCTGTTTAAGTaGAAGGAAGAGTTGTACATCTCTCGTGAAAGGAAGAGTTGTACA +
Preference number: 5 (lower is better)
Translates to: LKLGELITLQWPLFK*KEELYISRERKSCT
Trigger: TGTACAACTCTTCCTTTCACGAGAGATGTACAACTCTTCCTTTCACTTAAACAGAGGCCACTGTAGGGTTATTAATTCACCTAATTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS TCA 90 bp GAAAGGAAGAGTTGTACATCTCTCATTTTAAATCAAAGCCAAAAATaGTTGATTAAACTTAGTGAGGAAGCCATGCCGAATGCCAACATA +
Preference number: 5 (lower is better)
Translates to: ERKSCTSLILNQSQK*LIKLSEEAMPNANI
Trigger: TATGTTGGCATTCGGCATGGCTTCCTCACTAAGTTTAATCAATCATTTTTGGCTTTGATTTAAAATGAGAGATGTACAACTCTTCCTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS GCA 72 bp GACGCGGGGCGGTCGTCGACCGGCAGCCGGGACCATTaGCCAGGCCGAGAGGCAATCGGCGCACGGCTACGC +
Preference number: 6 (lower is better)
Translates to: DAGRSSTGSRDH*PGREAIGARLR
Trigger: GCGTAGCCGTGCGCCGATTGCCTCTCGGCCTGGGCAATGGTCCCGGCTGCCGGTCGACGACCGCCCCGCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000506916.1
ENST00000511070.5
CDS TCA 72 bp CCCACAGCAATACTTGCCACCAGCCGAGGAGCCGCATaGCGCGGGGCGGTCGTCGACCGGCAGCCGGGACCA +
Preference number: 6 (lower is better)
Translates to: PTAILATSRGAA*RGAVVDRQPGP
Trigger: TGGTCCCGGCTGCCGGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358387.9
ENST00000506916.1
ENST00000511070.5
CDS CAA 90 bp CTCCTCCACGCCGCGGACGGGAAGTCCCAGCACCCACAGCAATACTaGCCACCAGCCGAGGAGCCGCATGACGCGGGGCGGTCGTCGACC +
Preference number: 6 (lower is better)
Translates to: LLHAADGKSQHPQQY*PPAEEPHDAGRSST
Trigger: GGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGACTTCCCGTCCGCGGCGTGGAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506916.1
CDS CAA 90 bp TCCCTCCACGCCGCGGACGGGAAGTCCCAGCACCCACAGCAATACTaGCCACCAGCCGAGGAGCCGCATGACGCGGGGCGGTCGTCGACC +
Preference number: 6 (lower is better)
Translates to: SLHAADGKSQHPQQY*PPAEEPHDAGRSST
Trigger: GGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGACTTCCCGTCCGCGGCGTGGAGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511070.5
CDS CAA 90 bp AACCTCCACGCCGCGGACGGGAAGTCCCAGCACCCACAGCAATACTaGCCACCAGCCGAGGAGCCGCATGACGCGGGGCGGTCGTCGACC +
Preference number: 6 (lower is better)
Translates to: NLHAADGKSQHPQQY*PPAEEPHDAGRSST
Trigger: GGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGGCAAGTATTGCTGTGGGTGCTGGGACTTCCCGTCCGCGGCGTGGAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358387.9
CDS TCA 72 bp ACCACTTTCCTCTGCAACACCAGCCGAGGAGCCGCATaGCGCGGGGCGGTCGTCGACCGGCAGCCGGGACCA +
Preference number: 6 (lower is better)
Translates to: TTFLCNTSRGAA*RGAVVDRQPGP
Trigger: TGGTCCCGGCTGCCGGTCGACGACCGCCCCGCGTCATGCGGCTCCTCGGCTGGTGTTGCAGAGGAAAGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507024.5
CDS CCA 72 bp CCCAGCACCGCATTGGCCTCTTCTGCTGCCCTGTCCTaGCCCATCGGGTCATGCAGGAGCTCCTCCTCACCC +
Preference number: 6 (lower is better)
Translates to: PSTALASSAALS*PIGSCRSSSSP
Trigger: GGGTGAGGAGGAGCTCCTGCATGACCCGATGGGCCAGGACAGGGCAGCAGAAGAGGCCAATGCGGTGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358387.9
ENST00000506916.1
ENST00000507024.5
ENST00000508779.1
ENST00000508810.1
CDS GCA 72 bp TACCGGGAGTCTCCCGTGTTTCTCGTCTGTTTTTCATaGAGGGAGCTGAGCAAGACTGGCCTCCTTAAGACA +
Preference number: 6 (lower is better)
Translates to: YRESPVFLVCFS*RELSKTGLLKT
Trigger: TGTCTTAAGGAGGCCAGTCTTGCTCAGCTCCCTGCATGAAAAACAGACGAGAAACACGGGAGACTCCCGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508810.1
CDS CAA 72 bp GGTAGGAGCAGCGAGAGAAGGAACCCTCGGAACCTTTaGGATTTTGAACCATATGAATCCAGGAACCAGCAA +
Preference number: 6 (lower is better)
Translates to: GRSSERRNPRNL*DFEPYESRNQQ
Trigger: TTGCTGGTTCCTGGATTCATATGGTTCAAAATCCAAAAGGTTCCGAGGGTTCCTTCTCTCGCTGCTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS CCA 72 bp CATTTGTTTCTGACCTCTTTGCTTATGGGTCATGGCTaGGGGGCACTCCTTTTCTGCAATCTGAGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: HLFLTSLLMGHG*GALLFCNLSCF
Trigger: AAAGCAACTCAGATTGCAGAAAAGGAGTGCCCCCCAGCCATGACCCATAAGCAAAGAGGTCAGAAACAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506350.1
CDS CCA 72 bp GTAGGAGCAGCGAGAGAAGGAACCCTCGGAACCTTTTaGATTTTGAACCATATGAATCCAGGAACCAGCAAA +
Preference number: 6 (lower is better)
Translates to: VGAAREGTLGTF*ILNHMNPGTSK
Trigger: TTTGCTGGTTCCTGGATTCATATGGTTCAAAATCCAAAAGGTTCCGAGGGTTCCTTCTCTCGCTGCTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS CCA 72 bp GGTGAGGAAACTGCAGAGGAAAAGTCTGAAATTAGCTaGGGTTGGCTCATGAGGTTTAAGAAAGAAGCTGTC +
Preference number: 6 (lower is better)
Translates to: GEETAEEKSEIS*GWLMRFKKEAV
Trigger: GACAGCTTCTTTCTTAAACCTCATGAGCCAACCCCAGCTAATTTCAGACTTTTCCTCTGCAGTTTCCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS CCA 72 bp GAAACTGCAGAGGAAAAGTCTGAAATTAGCTGGGGTTaGCTCATGAGGTTTAAGAAAGAAGCTGTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: ETAEEKSEISWG*LMRFKKEAVSR
Trigger: TCTGGAGACAGCTTCTTTCTTAAACCTCATGAGCCAACCCCAGCTAATTTCAGACTTTTCCTCTGCAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505174.1
CDS CAA 90 bp TTTTACTGCATTTCACTCCATTGCACTTTGCTGACATTGCATTTTTaGCAGATTGAAAGTTTGTGGCAACTCGGCATCCAGCAAGTTTTT +
Preference number: 6 (lower is better)
Translates to: FYCISLHCTLLTLHF*QIESLWQLGIQQVF
Trigger: AAAAACTTGCTGGATGCCGAGTTGCCACAAACTTTCAATCTGCAAAAAATGCAATGTCAGCAAAGTGCAATGGAGTGAAATGCAGTAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505174.1