Pregenerated sensors for TXNDC11 (Homo sapiens)
Ensembl gene IDs: ENSG00000153066Ensembl transcript IDs: ENST00000283033.10, ENST00000356957.7, ENST00000570917.5, ENST00000571882.1, ENST00000572732.1, ENST00000573174.1, ENST00000575349.1, ENST00000575591.1, ENST00000576969.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTaGCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: TALVLSSARYSAGDS*LRVAAATERASPGF Trigger: AAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| 3UTR-3UTR CCA 90 bp | CCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGCCCACTTAAGTTCAGGACCTCCCTaGGGAAGACAAGTGATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PCGRSHRKSVSWFSKAHLSSGPP*GRQVMC Trigger: ACACATCACTTGTCTTCCCCAGGGAGGTCCTGAACT...TAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCGTCTCCTGGTTTTCTAAGGCCCACTTACAGATGTTCTCAGCTGTGTAGTGGAGGCAGATTCCAGTaGGCCAAGATCACGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RASPGFLRPTYRCSQLCSGGRFQ*AKITPL Trigger: CAGTGGCGTGATCTTGGCTCACTGGAATCTGCCTCC...ACTACACAGCTGAGAACATCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571882.1 |
||
| 3UTR-3UTR GCA 90 bp | ATTAAAAGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCCAAGATCACGCCACTaGACTCCAGCCTGGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: IKRYEQKQRWSFLQLVIQPRSRH*TPAWAA Trigger: TGCCGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGG...CTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCTTTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571882.1 |
||
| 3UTR GCA 72 bp | GTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTaGCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSSARYSAGDS*LRVAAATERAS Trigger: AGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| 3UTR CCA 72 bp | CCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTaGTTTTCTAAGGCCCACTTACAGATGTTCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPCGRSHRKSVS*FSKAHLQMFSA Trigger: AGCTGAGAACATCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| 3UTR TCA 72 bp | TCCAAGGCCACTTCGGTGATCTCGTCTATTAAAGGATaGCTTTCGGCCAGGGGATTAAAAGGTATGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKATSVISSIKG*LSARGLKGMNR Trigger: TCTGTTCATACCTTTTAATCCCCTGGCCGAAAGTCATCCTTTAATAGACGAGATCACCGAAGTGGCCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGGAGACGCTCCACCACCTGGTCCCCATGACAGTTGTTGTACTCCAAGGCTGCCCTGGCAGCGATaGACTGTCCACACCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AEGDAPPPGPHDSCCTPRLPWQR*TVHTKG Trigger: CCCCTTGGTGTGGACAGTCCATCGCTGCCAGGGCAG...CCTTGGAGTACAACAACTGTCATGGGGACCAGGTGGTGGAGCGTCTCCTTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | TCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGGGAGGCAGATTCCAGTaGGCCAAGATCACGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCLRVAAATERASPGFLRGGRFQ*AKITPL Trigger: CAGTGGCGTGATCTTGGCTCACTGGAATCTGCCTCC...CCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000571882.1 |
||
| CDS-3UTR GCA 90 bp | AGGAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTCCGTCGAACGTACTCTaGATAATCCAGCTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLLPPCGRSHRKSVSWFPSNVL*IIQLPL Trigger: CAGGGGCAGCTGGATTATGCAGAGTACGTTCGACGG...AAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGCCCACTTACAGAACTCTTGCCTCCGTGTaGCCGCAGCCACCGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAAATERASPGFLRPTYRTLASV*PQPPKE Trigger: CTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGT...TCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | GGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGCCCACTTACAGATGACTCTTGCCTCCGTGTaGCCGCAGCCACCGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSHRKSVSWFSKAHLQMTLASV*PQPPKE Trigger: CTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGT...CATCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | GAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTGCTTGCTCAATTTCTaGCCTGGCAGCGATGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ETLASVWPQPPKERLLVFCLLNF*PGSDGL Trigger: CAGTCCATCGCTGCCAGGGCAGAAATTGAGCAAGCA...GAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | AACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGCCTCCGTCAGCAGGAGACTCTTaGCTCCGTGTGGCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSAGPFFSSLFSRRLLPPSAGDS*LRVAAA Trigger: GGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGA...CGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGCCTGGGGAAGACAAGTaGTGTGTTGAAATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QQETLASVWPQPPKERLLPGEDK*CVEMSM Trigger: CATAGACATTTCAACACATCACTTGTCTTCCCCAGG...CAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | GCTGAAGGAGACGCTCCACCACCTGGTCCCCATGACAGTTGTTGTACTCCAAGGAGCCGACTTGCTGCTTaGTCAATTTCTGCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGDAPPPGPHDSCCTPRSRLAA*SISALA Trigger: TGCCAGGGCAGAAATTGAGCAAGCAGCAAGTCGGCT...CCTTGGAGTACAACAACTGTCATGGGGACCAGGTGGTGGAGCGTCTCCTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | GCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGCCCACTTACAGATGTGCTCAATTTCTGCCCTaGCAGCGATGGACTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAATERASPGFLRPTYRCAQFLP*QRWTVH Trigger: GTGGACAGTCCATCGCTGCCAGGGCAGAAATTGAGC...ACATCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGCCTCCGTGTGAGCAGTACCACCTCTaGATCCCGTCGAACGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGPFFSSLFSRRLLPPCEQYHL*IPSNVL Trigger: GAGTACGTTCGACGGGATTCAGAGGTGGTACTGCTC...ACACGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | GAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTCCAAGATCACGCCACTaGACTCCAGCCTGGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQKQRWSFLQLVIQQETLPRSRH*TPAWAA Trigger: TGCCGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGG...AAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571882.1 |
||
| CDS-3UTR CCA 90 bp | TATTCAGCAGGAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCGAAAGAGCGTCTCCTaGTTTTCTAAGGCCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: YSAGDSCLRVAAATERASRKSVS*FSKAHL Trigger: TAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCG...AGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGCCTCCGTGTGCCACAAACAACACCTaGTCTGAAAGCCGACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGPFFSSLFSRRLLPPCATNNT*SESRLA Trigger: AGCAAGTCGGCTTTCAGATCAGGTGTTGTTTGTGGC...ACACGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTTACTCCAGGCTCCGATaGTACAGATATATTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLLPPCGRSHRKSVSWFSYSRLR*YRYITG Trigger: TCCTGTAATATATCTGTATCATCGGAGCCTGGAGTA...AGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | GGCCCACTTACAGATGTTCTCAGCTGTGTAGTTCAGGACCTCCCTGGGGAAGACCGAAAGAGCGTCTCCTaGTTTTCTAAGGCCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GPLTDVLSCVVQDLPGEDRKSVS*FSKAHL Trigger: TAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCG...GTCTTCCCCAGGGAGGTCCTGAACTACACAGCTGAGAACATCTGTAAGTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGCCTCCGTGTAAACAACACCTGATCTaGAAGCCGACTTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGPFFSSLFSRRLLPPCKQHLI*KPTCCL Trigger: CAAGCAGCAAGTCGGCTTTCAGATCAGGTGTTGTTT...ACACGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | GCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGCCCACTTACAGATGTTCGTCTATTAAAGGATaGCTTTCGGCCAGGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: AAATERASPGFLRPTYRCSSIKG*LSARGL Trigger: TAATCCCCTGGCCGAAAGTCATCCTTTAATAGACGA...ACATCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | GGAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTTATTATCACATCTTTTaGTCGACTGCAGGTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GDSCLRVAAATERASPGFYYHIF*STAGEL Trigger: AAGTTCACCTGCAGTCGAGCAAAAGATGTGATAATA...AAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | GGATTAAAAGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCTCAGCAGGAGACTCTTaGCTCCGTGTGGCCGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGMNRNSAGPFFSSLFSAGDS*LRVAAA Trigger: GGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGA...GAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCTTTTAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | CGCAGCCACCGAAAGAGCGTCTCCTGGTTTTCTAAGGCCCACTTACAGATGTTCCCTGGGGAAGACAAGTaGTGTGTTGAAATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RSHRKSVSWFSKAHLQMFPGEDK*CVEMSM Trigger: CATAGACATTTCAACACATCACTTGTCTTCCCCAGG...GAACATCTGTAAGTGGGCCTTAGAAAACCAGGAGACGCTCTTTCGGTGGCTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGACCACCTGGTCCCCATaGCAGTTGTTGTACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRNSAGPFFSSLFSRRLLTTWSP*QLLYSK Trigger: CTTGGAGTACAACAACTGTCATGGGGACCAGGTGGT...CAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | AGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGCCTCCGTGTGCTGACAGGTGGCTTTaGTGGTATTATCACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGPFFSSLFSRRLLPPCADRWL*WYYHIF Trigger: AAAGATGTGATAATACCAGCAAAGCCACCTGTCAGC...ACACGGAGGCAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGTCAAGGAGAAAAAGCTaGCAGGTGGCTTTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRNSAGPFFSSLFSRRLLSRRKS*QVALLV Trigger: TACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGA...CAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | GGATTAAAAGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCACCAGGAGGCTGGGGTaGGCCACTGAACTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLKGMNRNSAGPFFSSLFTRRLG*ATELKV Trigger: TACTTTGAGTTCAGTGGCTCACCCCAGCCTCCTGGT...GAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCTTTTAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | AACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTGGAACAGAAACAGCGCTaGTCCTTTCTTCAGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NRNSAGPFFSSLFSRRLLEQKQR*SFLQLV Trigger: AACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTC...CAAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGTCGTCTATTAAAGGATaGCTTTCGGCCAGGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: KGMNRNSAGPFFSSLFSRSSIKG*LSARGL Trigger: TAATCCCCTGGCCGAAAGTCATCCTTTAATAGACGA...CCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR GCA 90 bp | AGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGCCACCAACAGTTAATTaGCACAAACAACACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RYEQKQRWSFLQLVIQQEPPTVN*HKQHLI Trigger: GATCAGGTGTTGTTTGTGGCAATTAACTGTTGGTGG...CTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AATACACACTTCCAGAGTGTACTAAGGATACCAGTTTCGCAAGATGTTTATTTGGCTGGGGTGAGCCACTaGACTCAAAGTACCCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTHFQSVLRIPVSQDVYLAGVSH*TQSTRV Trigger: TACTCGGGTACTTTGAGTTCAGTGGCTCACCCCAGC...CAAATAAACATCTTGCGAAACTGGTATCCTTAGTACACTCTGGAAGTGTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AATACACACTTCCAGAGTGTACTAAGGATACCAGTTTCGCAAGATGTTTATTTGACCAGGAGGCTGGGGTaGGCCACTGAACTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NTHFQSVLRIPVSQDVYLTRRLG*ATELKV Trigger: TACTTTGAGTTCAGTGGCTCACCCCAGCCTCCTGGT...CAAATAAACATCTTGCGAAACTGGTATCCTTAGTACACTCTGGAAGTGTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | GAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAGACTCTTAATGTAATGCTGAGGTaGAGAAGGTCAAATAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQKQRWSFLQLVIQQETLNVMLR*RRSNNQ Trigger: CTGGTTATTTGACCTTCTTCACCTCAGCATTACATT...AAGAGTCTCCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGGATTAAAAGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTGAAAAAGCTGACAGGTaGCTTTGCTGGTATTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGIKRYEQKQRWSFLQLVEKADR*LCWYYH Trigger: GTGATAATACCAGCAAAGCCACCTGTCAGCTTTTTC...AACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCTTTTAATCCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGTATGAACAGAAACAGCGCTGGTCCTTTCTTCAGCTCGTTATTCAGCAGGAATGTAATGCTGAGGTaGAGAAGGTCAAATAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGMNRNSAGPFFSSLFSRNVMLR*RRSNNQ Trigger: CTGGTTATTTGACCTTCTTCACCTCAGCATTACATT...CCTGCTGAATAACGAGCTGAAGAAAGGACCAGCGCTGTTTCTGTTCATACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS-3UTR CCA 90 bp | GATACCAGTTTCGCAAGATGTTTATTTGTGATAACCCCAAATCGTACTGTTCCTAGTTCAGGACCTCCCTaGGGAAGACAAGTGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTSFARCLFVITPNRTVPSSGPP*GRQVMC Trigger: ACACATCACTTGTCTTCCCCAGGGAGGTCCTGAACT...AGGAACAGTACGATTTGGGGTTATCACAAATAAACATCTTGCGAAACTGGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS GCA 90 bp | ATACCGCCGCCGCCGCCTCGGGCCCGAAGGCCCGGCCCGGCCCGTTaGTCCCCAATCCCGCAGCTCGCCGCACCCGCTAACCCGGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPPPPPRARRPGPAR*SPIPQLAAPANPDA Trigger: AGCGTCCGGGTTAGCGGGTGCGGCGAGCTGCGGGATTGGGGAGCAACGGGCCGGGCCGGGCCTTCGGGCCCGAGGCGGCGGCGGCGGTAT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283033.10 |
||
| CDS GCA 90 bp | GTTGCAGCAGGGGGACGCTGTGATCGTTGGCGGGTCTGGCAGCTGTaGCGGCACTTCCAGGGCCAGGGACTCCAGCACTGGAGCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VAAGGRCDRWRVWQL*RHFQGQGLQHWSIH Trigger: GTGGATGCTCCAGTGCTGGAGTCCCTGGCCCTGGAAGTGCCGGCACAGCTGCCAGACCCGCCAACGATCACAGCGTCCCCCTGCTGCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 90 bp | CACCACAGTGTTGCAGCAGGGGGACGCTGTGATCGTTGGCGGGTCTaGCAGCTGTGCCGGCACTTCCAGGGCCAGGGACTCCAGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HHSVAAGGRCDRWRV*QLCRHFQGQGLQHW Trigger: CCAGTGCTGGAGTCCCTGGCCCTGGAAGTGCCGGCACAGCTGCCAGACCCGCCAACGATCACAGCGTCCCCCTGCTGCAACACTGTGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 90 bp | CACTGTGGCACGCTGACCGAGCTCGGCTTCATGCCCCCGGAGGTCTaGTTGACACAGAGTTCACAGACGTTGTGGGTCCTGGAGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HCGTLTELGFMPPEV*LTQSSQTLWVLEKE Trigger: CTCCTTCTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGGCATGAAGCCGAGCTCGGTCAGCGTGCCACAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS-3UTR CAA 90 bp | TATTCAGCAGGAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTTTCAGCAGGAGACTCTaGCCTCCGTGTGGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YSAGDSCLRVAAATERASFSRRL*PPCGRS Trigger: GCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGAA...AGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGAATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS GCA 90 bp | CACGTGTTCTCGGTAAGGAGGTTTTCTGAGGCATCGGCCAGCTCCTaGAGCTTGCGGGCCAGCTCCTGCAGCTCACGTGTCTTCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVFSVRRFSEASASS*SLRASSCSSRVFCS Trigger: TGAGCAGAAGACACGTGAGCTGCAGGAGCTGGCCCGCAAGCTGCAGGAGCTGGCCGATGCCTCAGAAAACCTCCTTACCGAGAACACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS GCA 90 bp | AGCCGGTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTaGACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRCSSLRALESWDST*TCARWRLLISALSF Trigger: GAAACTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAGTGCCCGCAGAGATGAGCACCGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS CCA 90 bp | TTCATGCCCCCGGAGGTCTGGTTGACACAGAGTTCACAGACGTTGTaGGTCCTGGAGAAGGAGTGCCACTGGGGCAGCACCACAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FMPPEVWLTQSSQTL*VLEKECHWGSTTVL Trigger: CAACACTGTGGTGCTGCCCCAGTGGCACTCCTTCTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGGCATGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 90 bp | CTCTCCAAGTGGGAGATGTGCCCCCGCTGTAAGACTGCCTCGCTCTaGAGACACTCCTTGGTAGGAGAGTTAGCCACATTCTGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSKWEMCPRCKTASL*RHSLVGELATFWGL Trigger: CAGCCCCCAGAATGTGGCTAACTCTCCTACCAAGGAGTGTCTTCAGAGCGAGGCAGTCTTACAGCGGGGGCACATCTCCCACTTGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS GCA 90 bp | CTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTTGTaGTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LISAGTGELGLHLHL*SLEAAYFCSQFLDL Trigger: GAGATCCAGAAACTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAGTGCCCGCAGAGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS GCA 90 bp | CTGGGACTCCACCTGCACTTGTGCTCGCTGGAGGCTGCTTATTTCTaGTCTCAGTTTCTGGATCTCTCTCTCCAAGTGGGAGATGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLHLHLCSLEAAYF*SQFLDLSLQVGDVP Trigger: GGGCACATCTCCCACTTGGAGAGAGAGATCCAGAAACTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS-3UTR CAA 90 bp | GGAGACTCTTGCCTCCGTGTGGCCGCAGCCACCGAAAGAGCGTCTCCTGGTTTTGATCTGAAAGCCGACTaGCTGCTTGCTCAATTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDSCLRVAAATERASPGFDLKAD*LLAQFL Trigger: CAGAAATTGAGCAAGCAGCAAGTCGGCTTTCAGATC...AAAACCAGGAGACGCTCTTTCGGTGGCTGCGGCCACACGGAGGCAAGAGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576969.5 |
||
| CDS TCA 90 bp | GGACTGTCCACACCAAGGGGCATAGAAGAAGAGCAGTACCACCTCTaGATCCCGTCGAACGTACTCTGCATAATCCAGCTGCCCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLSTPRGIEEEQYHL*IPSNVLCIIQLPLE Trigger: TTCCAGGGGCAGCTGGATTATGCAGAGTACGTTCGACGGGATTCAGAGGTGGTACTGCTCTTCTTCTATGCCCCTTGGTGTGGACAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | CTGAAAGCCGACTTGCTGCTTGCTCAATTTCTGCCCTGGCAGCGATaGACTGTCCACACCAAGGGGCATAGAAGAAGAGCAGTACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LKADLLLAQFLPWQR*TVHTKGHRRRAVPP Trigger: AGGTGGTACTGCTCTTCTTCTATGCCCCTTGGTGTGGACAGTCCATCGCTGCCAGGGCAGAAATTGAGCAAGCAGCAAGTCGGCTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000575591.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | CAGGCTGATCTGAAAGCCGACTTGCTGCTTGCTCAATTTCTGCCCTaGCAGCGATGGACTGTCCACACCAAGGGGCATAGAAGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QADLKADLLLAQFLP*QRWTVHTKGHRRRA Trigger: TGCTCTTCTTCTATGCCCCTTGGTGTGGACAGTCCATCGCTGCCAGGGCAGAAATTGAGCAAGCAGCAAGTCGGCTTTCAGATCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575591.1 |
||
| CDS GCA 90 bp | GCTCTCCACCTCCCTGCCTGTTCTAGTCCCCAAGTCCCCACTGCCTaGAGCTGGTTCTACCTTAGACATGTGACAGAAATCGCCAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: ALHLPACSSPQVPTA*SWFYLRHVTEIANL Trigger: TAAATTGGCGATTTCTGTCACATGTCTAAGGTAGAACCAGCTGCAGGCAGTGGGGACTTGGGGACTAGAACAGGCAGGGAGGTGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572732.1 |
||
| CDS CCA 90 bp | ACACCTGATCTGAAAGCCGACTTGCTGCTTGCTCAATTTCTGCCCTaGCAGCGATGGACTGTCCACACCAAGGGGCATAGAAGAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TPDLKADLLLAQFLP*QRWTVHTKGHRRRA Trigger: TGCTCTTCTTCTATGCCCCTTGGTGTGGACAGTCCATCGCTGCCAGGGCAGAAATTGAGCAAGCAGCAAGTCGGCTTTCAGATCAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | AACGTACTCTGCATAATCCAGCTGCCCCTGGAAGAGGTCAAGGACTaGAGACCTCAAGGAGAAAAAGCTGACAGGTGGCTTTGCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NVLCIIQLPLEEVKD*RPQGEKADRWLCWY Trigger: ATACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGAGGTCTCCAGTCCTTGACCTCTTCCAGGGGCAGCTGGATTATGCAGAGTACGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | CACCTCCCTGCCTGTTCTAGTCCCCAAGTCCCCACTGCCTGCAGCTaGTTCTACCTTAGACATGTGACAGAAATCGCCAATTTAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLPACSSPQVPTACS*FYLRHVTEIANLES Trigger: ACTTTCTAAATTGGCGATTTCTGTCACATGTCTAAGGTAGAACCAGCTGCAGGCAGTGGGGACTTGGGGACTAGAACAGGCAGGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572732.1 |
||
| CDS CCA 90 bp | TCTGCAGCTCAGGCCTGTGAAGTTTGTGCTAGTCATGTCCACTTCTaGAAAGAGATACCTGTTCTCCTCAATGTGAGGAACGGAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAAQACEVCASHVHF*KEIPVLLNVRNGAW Trigger: CCAAGCTCCGTTCCTCACATTGAGGAGAACAGGTATCTCTTTCCAGAAGTGGACATGACTAGCACAAACTTCACAGGCCTGAGCTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS-3UTR CAA 90 bp | GGATACCAGTTTCGCAAGATGTTTATTTGTGATAACCCCAAATCGTACTGTTCCTTCAGCAGGAGACTCTaGCCTCCGTGTGGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GYQFRKMFICDNPKSYCSFSRRL*PPCGRS Trigger: GCTGCGGCCACACGGAGGCAAGAGTCTCCTGCTGAA...GGAACAGTACGATTTGGGGTTATCACAAATAAACATCTTGCGAAACTGGTATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571882.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | AAGGACTGGAGACCTCAAGGAGAAAAAGCTGACAGGTGGCTTTGCTaGTATTATCACATCTTTTGCTCGACTGCAGGTGAACTTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDWRPQGEKADRWLC*YYHIFCSTAGELEG Trigger: GCCCTCAAGTTCACCTGCAGTCGAGCAAAAGATGTGATAATACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGAGGTCTCCAGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS GCA 90 bp | GTCAAGGACTGGAGACCTCAAGGAGAAAAAGCTGACAGGTGGCTTTaGTGGTATTATCACATCTTTTGCTCGACTGCAGGTGAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKDWRPQGEKADRWL*WYYHIFCSTAGELE Trigger: CTCAAGTTCACCTGCAGTCGAGCAAAAGATGTGATAATACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGAGGTCTCCAGTCCTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | GAAGAGGTCAAGGACTGGAGACCTCAAGGAGAAAAAGCTGACAGGTaGCTTTGCTGGTATTATCACATCTTTTGCTCGACTGCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEVKDWRPQGEKADR*LCWYYHIFCSTAGE Trigger: TTCACCTGCAGTCGAGCAAAAGATGTGATAATACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGAGGTCTCCAGTCCTTGACCTCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 90 bp | TTCTGGAAAGAGATACCTGTTCTCCTCAATGTGAGGAACGGAGCTTaGGGCATCAACCTCACATTTCTTCTCAAGGGAAGAAAATGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FWKEIPVLLNVRNGA*GINLTFLLKGRKCN Trigger: GTTGCATTTTCTTCCCTTGAGAAGAAATGTGAGGTTGATGCCCCAAGCTCCGTTCCTCACATTGAGGAGAACAGGTATCTCTTTCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 90 bp | ATTCTTCTTTCACGTCAACAATTGCCGCAAATTCTTTCACCTGAGTaGAGCTCGGAGCACCCAGTCTCTCTGCATATAACCAAAACAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILLSRQQLPQILSPE*SSEHPVSLHITKTN Trigger: ATTTGTTTTGGTTATATGCAGAGAGACTGGGTGCTCCGAGCTCCACTCAGGTGAAAGAATTTGCGGCAATTGTTGACGTGAAAGAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS GCA 72 bp | CTGCCGCCGCCGCGGCCTCCGCATTCCGACATTACATaGTCCCAGTCGCCGGCTTTATACCGCCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LPPPRPPHSDIT*SQSPALYRRRR Trigger: GCGGCGGCGGCGGTATAAAGCCGGCGACTGGGAGCATGTAATGTCGGAATGCGGAGGCCGCGGCGGCGGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 |
||
| CDS CCA 72 bp | CTGTGCCGGCACTTCCAGGGCCAGGGACTCCAGCACTaGAGCATCCACCCGCCGCAGGTGCTGAAGGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: LCRHFQGQGLQH*SIHPPQVLKET Trigger: CGTCTCCTTCAGCACCTGCGGCGGGTGGATGCTCCAGTGCTGGAGTCCCTGGCCCTGGAAGTGCCGGCACAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 72 bp | GTTGCAGCAGGGGGACGCTGTGATCGTTGGCGGGTCTaGCAGCTGTGCCGGCACTTCCAGGGCCAGGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: VAAGGRCDRWRV*QLCRHFQGQGL Trigger: GAGTCCCTGGCCCTGGAAGTGCCGGCACAGCTGCCAGACCCGCCAACGATCACAGCGTCCCCCTGCTGCAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS GCA 72 bp | CCTCTCTCTGGGCCGCCAGGCTTTCAGCTCCATCCCTaGCCTCCAGTTTCCTCTCCATGGTCGCCACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLSGPPGFQLHP*PPVSSPWSPPG Trigger: TCCTGGTGGCGACCATGGAGAGGAAACTGGAGGGCAGGGATGGAGCTGAAAGCCTGGCGGCCCAGAGAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS CAA 72 bp | CCCCCGGAGGTCTGGTTGACACAGAGTTCACAGACGTaGTGGGTCCTGGAGAAGGAGTGCCACTGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPEVWLTQSSQT*WVLEKECHWGS Trigger: GCTGCCCCAGTGGCACTCCTTCTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CAA 90 bp | GGCTTCATGCCCCCGGAGGTCTGGTTGACACAGAGTTCACAGACGTaGTGGGTCCTGGAGAAGGAGTGCCACTGGGGCAGCACCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GFMPPEVWLTQSSQT*WVLEKECHWGSTTV Trigger: CACTGTGGTGCTGCCCCAGTGGCACTCCTTCTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGGCATGAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CAA 90 bp | TGTGGCACGCTGACCGAGCTCGGCTTCATGCCCCCGGAGGTCTGGTaGACACAGAGTTCACAGACGTTGTGGGTCCTGGAGAAGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CGTLTELGFMPPEVW*TQSSQTLWVLEKEC Trigger: GCACTCCTTCTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGGCATGAAGCCGAGCTCGGTCAGCGTGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 72 bp | CCGGAGGTCTGGTTGACACAGAGTTCACAGACGTTGTaGGTCCTGGAGAAGGAGTGCCACTGGGGCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PEVWLTQSSQTL*VLEKECHWGST Trigger: GGTGCTGCCCCAGTGGCACTCCTTCTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 72 bp | ACGCTGACCGAGCTCGGCTTCATGCCCCCGGAGGTCTaGTTGACACAGAGTTCACAGACGTTGTGGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLTELGFMPPEV*LTQSSQTLWVL Trigger: CAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGGCATGAAGCCGAGCTCGGTCAGCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CAA 72 bp | CTGACCGAGCTCGGCTTCATGCCCCCGGAGGTCTGGTaGACACAGAGTTCACAGACGTTGTGGGTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LTELGFMPPEVW*TQSSQTLWVLE Trigger: CTCCAGGACCCACAACGTCTGTGAACTCTGTGTCAACCAGACCTCCGGGGGCATGAAGCCGAGCTCGGTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 72 bp | GATCTTGAGCCACGTGTTCTCGGTAAGGAGGTTTTCTaGGGCATCGGCCAGCTCCTGCAGCTTGCGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLEPRVLGKEVF*GIGQLLQLAGQ Trigger: CTGGCCCGCAAGCTGCAGGAGCTGGCCGATGCCTCAGAAAACCTCCTTACCGAGAACACGTGGCTCAAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS TCA 72 bp | TCCATGGGCAGGTTCCGAGCTAGCTGGATGAAGATGTaGTTGAGGGATGGACAGAAGCCGCACCACGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SMGRFRASWMKM*LRDGQKPHHGA Trigger: CGCTCCGTGGTGCGGCTTCTGTCCATCCCTCAATCACATCTTCATCCAGCTAGCTCGGAACCTGCCCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 ENST00000575349.1 |
||
| CDS GCA 72 bp | TCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTaGACTTGTGCTCGCTGGAGGCTGCTTATTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRALESWDST*TCARWRLLISA Trigger: AGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAGTGCCCGCAGAGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS CAA 90 bp | GTGCTCATCTCTGCGGGCACTGGAGAGCTGGGACTCCACCTGCACTaGTGCTCGCTGGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VLISAGTGELGLHLH*CSLEAAYFCSQFLD Trigger: ATCCAGAAACTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAGTGCCCGCAGAGATGAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS TCA 72 bp | TGGGAGATGTGCCCCCGCTGTAAGACTGCCTCGCTCTaGAGACACTCCTTGGTAGGAGAGTTAGCCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: WEMCPRCKTASL*RHSLVGELATF Trigger: GAATGTGGCTAACTCTCCTACCAAGGAGTGTCTTCAGAGCGAGGCAGTCTTACAGCGGGGGCACATCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS CCA 72 bp | CTGAAAGCCGACTTGCTGCTTGCTCAATTTCTGCCCTaGCAGCGATGGACTGTCCACACCAAGGGGCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: LKADLLLAQFLP*QRWTVHTKGHR Trigger: TCTATGCCCCTTGGTGTGGACAGTCCATCGCTGCCAGGGCAGAAATTGAGCAAGCAGCAAGTCGGCTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000575591.1 ENST00000576969.5 |
||
| CDS CCA 72 bp | CTGGAGAGCTGGGACTCCACCTGCACTTGTGCTCGCTaGAGGCTGCTTATTTCTGCTCTCAGTTTCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LESWDSTCTCAR*RLLISALSFWI Trigger: GATCCAGAAACTGAGAGCAGAAATAAGCAGCCTCCAGCGAGCACAAGTGCAGGTGGAGTCCCAGCTCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS CAA 72 bp | AGTACCCGAGTACTCCAGGCTGATCTGAAAGCCGACTaGCTGCTTGCTCAATTTCTGCCCTGGCAGCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: STRVLQADLKAD*LLAQFLPWQRW Trigger: CCATCGCTGCCAGGGCAGAAATTGAGCAAGCAGCAAGTCGGCTTTCAGATCAGCCTGGAGTACTCGGGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575591.1 |
||
| CDS TCA 72 bp | AGAAGGTCAAATAACCAGGAGGCTGGGGTGAGCCACTaGACTCAAAGTACCCGAGTACTCCAGGCTCCGATG | + |
|
Preference number: 6 (lower is better) Translates to: RRSNNQEAGVSH*TQSTRVLQAPM Trigger: CATCGGAGCCTGGAGTACTCGGGTACTTTGAGTTCAGTGGCTCACCCCAGCCTCCTGGTTATTTGACCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000571882.1 ENST00000573174.1 ENST00000576969.5 |
||
| CDS GCA 72 bp | CTCCCTGCCTGTTCTAGTCCCCAAGTCCCCACTGCCTaGAGCTGGTTCTACCTTAGACATGTGACAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: LPACSSPQVPTA*SWFYLRHVTEI Trigger: GATTTCTGTCACATGTCTAAGGTAGAACCAGCTGCAGGCAGTGGGGACTTGGGGACTAGAACAGGCAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572732.1 |
||
| CDS CCA 72 bp | GACTTGCTGCTTGCTCAATTTCTGCCCTGGCAGCGATaGACTGTCCACACCAAGGGGCATAGAAGAAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DLLLAQFLPWQR*TVHTKGHRRRA Trigger: TGCTCTTCTTCTATGCCCCTTGGTGTGGACAGTCCATCGCTGCCAGGGCAGAAATTGAGCAAGCAGCAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000575591.1 ENST00000576969.5 |
||
| CDS TCA 72 bp | AGAAGGTCAAATAACCAGGAGGCTGGGGTGAGCCACTaGACTCAAAGTACCCGAGTACTCCAGGCTCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSNNQEAGVSH*TQSTRVLQARS Trigger: ACTACGAGCCTGGAGTACTCGGGTACTTTGAGTTCAGTGGCTCACCCCAGCCTCCTGGTTATTTGACCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283033.10 ENST00000356957.7 |
||
| CDS TCA 72 bp | AGAAGGTCAAATAACCAGGAGGCTGGGGTGAGCCACTaGACTCAAAGTACCCGAGTACTCCAGGCTGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRSNNQEAGVSH*TQSTRVLQADL Trigger: CAGATCAGCCTGGAGTACTCGGGTACTTTGAGTTCAGTGGCTCACCCCAGCCTCCTGGTTATTTGACCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575591.1 |
||
| CDS CCA 72 bp | GCCTGTTCTAGTCCCCAAGTCCCCACTGCCTGCAGCTaGTTCTACCTTAGACATGTGACAGAAATCGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ACSSPQVPTACS*FYLRHVTEIAN Trigger: ATTGGCGATTTCTGTCACATGTCTAAGGTAGAACCAGCTGCAGGCAGTGGGGACTTGGGGACTAGAACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572732.1 |
||
| CDS TCA 72 bp | ACACCAAGGGGCATAGAAGAAGAGCAGTACCACCTCTaGATCCCGTCGAACGTACTCTGCATAATCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TPRGIEEEQYHL*IPSNVLCIIQL Trigger: CAGCTGGATTATGCAGAGTACGTTCGACGGGATTCAGAGGTGGTACTGCTCTTCTTCTATGCCCCTTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 72 bp | TCACGTCAACAATTGCCGCAAATTCTTTCACCTGAGTaGAGCTCGGAGCACCCAGTCTCTCTGCATATAACC | + |
|
Preference number: 6 (lower is better) Translates to: SRQQLPQILSPE*SSEHPVSLHIT Trigger: GGTTATATGCAGAGAGACTGGGTGCTCCGAGCTCCACTCAGGTGAAAGAATTTGCGGCAATTGTTGACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 72 bp | TCTTTCACGTCAACAATTGCCGCAAATTCTTTCACCTaGGTGGAGCTCGGAGCACCCAGTCTCTCTGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: SFTSTIAANSFT*VELGAPSLSAY Trigger: ATATGCAGAGAGACTGGGTGCTCCGAGCTCCACTCAGGTGAAAGAATTTGCGGCAATTGTTGACGTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CCA 72 bp | CCCGGCGGACAAACTTCTCAATGTAAACAGCACTCATaGGGCCTTTGTATTCGATTGGTCCAAAACTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGGQTSQCKQHS*GLCIRLVQNSD Trigger: ATCGGAGTTTTGGACCAATCGAATACAAAGGCCCCATGAGTGCTGTTTACATTGAGAAGTTTGTCCGCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283033.10 ENST00000356957.7 |
||
| CDS CCA 72 bp | GAGATACCTGTTCTCCTCAATGTGAGGAACGGAGCTTaGGGCATCAACCTCACATTTCTTCTCAAGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EIPVLLNVRNGA*GINLTFLLKGR Trigger: TCTTCCCTTGAGAAGAAATGTGAGGTTGATGCCCCAAGCTCCGTTCCTCACATTGAGGAGAACAGGTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CAA 72 bp | AGAGATACCTGTTCTCCTCAATGTGAGGAACGGAGCTaGGGGCATCAACCTCACATTTCTTCTCAAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RDTCSPQCEERS*GHQPHISSQGK Trigger: CTTCCCTTGAGAAGAAATGTGAGGTTGATGCCCCAAGCTCCGTTCCTCACATTGAGGAGAACAGGTATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 72 bp | AGACGATCGACCATAAATTCCCAAGGAAGGTCATTCTaGGACACGTCAATCCTTGCCACAGTGAATGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRSTINSQGRSF*DTSILATVNVS Trigger: GGACACATTCACTGTGGCAAGGATTGACGTGTCTCAGAATGACCTTCCTTGGGAATTTATGGTCGATCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 |
||
| CDS TCA 72 bp | ATGCTTGGGGAAATAAACTGCCTGCAGTACCTAGGGTaGGCTTCATCAGTGCTTGCTTTGGATCCAAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: MLGEINCLQYLG*ASSVLALDPRC Trigger: ACATCTTGGATCCAAAGCAAGCACTGATGAAGCTCACCCTAGGTACTGCAGGCAGTTTATTTCCCCAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572732.1 |
||
| CDS TCA 72 bp | GGGGAAGACCTTTCTTTAATGAATGTAATGCTGAGGTaGAGAAGGTCAAATAACCAGGAGGCTGGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GEDLSLMNVMLR*RRSNNQEAGVS Trigger: GCTCACCCCAGCCTCCTGGTTATTTGACCTTCTTCACCTCAGCATTACATTCATTAAAGAAAGGTCTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573174.1 |
||
| CDS GCA 72 bp | TGGAGACCTCAAGGAGAAAAAGCTGACAGGTGGCTTTaGTGGTATTATCACATCTTTTGCTCGACTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WRPQGEKADRWL*WYYHIFCSTAG Trigger: ACCTGCAGTCGAGCAAAAGATGTGATAATACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGAGGTCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS CCA 72 bp | CAGGCCTGTGAAGTTTGTGCTAGTCATGTCCACTTCTaGAAAGAGATACCTGTTCTCCTCAATGTGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QACEVCASHVHF*KEIPVLLNVRN Trigger: GTTCCTCACATTGAGGAGAACAGGTATCTCTTTCCAGAAGTGGACATGACTAGCACAAACTTCACAGGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS CAA 90 bp | CTTCTGGAAAGAGATACCTGTTCTCCTCAATGTGAGGAACGGAGCTaGGGGCATCAACCTCACATTTCTTCTCAAGGGAAGAAAATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLERDTCSPQCEERS*GHQPHISSQGKKMQ Trigger: TTGCATTTTCTTCCCTTGAGAAGAAATGTGAGGTTGATGCCCCAAGCTCCGTTCCTCACATTGAGGAGAACAGGTATCTCTTTCCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 72 bp | TGCTGTCTGATGCCACATGATAAAAGGTCTGCTCCTTaGGGTAGAAAGAATCCAGAGCTGCTGCCATTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CCLMPHDKRSAP*GRKNPELLPFQ Trigger: TTGAAATGGCAGCAGCTCTGGATTCTTTCTACCTCAAGGAGCAGACCTTTTATCATGTGGCATCAGACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 72 bp | CAAAAGGTATCAGTTGTCACTTCAGTGATTAAATGCTaGGACGGGAACTGGGCAGAGCCACTTCCAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QKVSVVTSVIKC*DGNWAEPLPMR Trigger: TCTCATTGGAAGTGGCTCTGCCCAGTTCCCGTCTCAGCATTTAATCACTGAAGTGACAACTGATACCTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000570917.5 ENST00000575349.1 |
||
| CDS CCA 72 bp | AAGGACTGGAGACCTCAAGGAGAAAAAGCTGACAGGTaGCTTTGCTGGTATTATCACATCTTTTGCTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: KDWRPQGEKADR*LCWYYHIFCST Trigger: AGTCGAGCAAAAGATGTGATAATACCAGCAAAGCCACCTGTCAGCTTTTTCTCCTTGAGGTCTCCAGTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000573174.1 ENST00000576969.5 |
||
| CDS TCA 72 bp | ATTCCAGAGCTTTCTTTAATGAATGTAATGCTGAGGTaGAGAAGGTCAAATAACCAGGAGGCTGGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IPELSLMNVMLR*RRSNNQEAGVS Trigger: GCTCACCCCAGCCTCCTGGTTATTTGACCTTCTTCACCTCAGCATTACATTCATTAAAGAAAGCTCTGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356957.7 |
||
| CDS TCA 72 bp | AGACTCCATCTTTCTTTAATGAATGTAATGCTGAGGTaGAGAAGGTCAAATAACCAGGAGGCTGGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLHLSLMNVMLR*RRSNNQEAGVS Trigger: GCTCACCCCAGCCTCCTGGTTATTTGACCTTCTTCACCTCAGCATTACATTCATTAAAGAAAGATGGAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571882.1 |
||
| CDS GCA 72 bp | CAAGATGTAATGAGATTCTTCTTTCACGTCAACAATTaGCGCAAATTCTTTCACCTGAGTGGAGCTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QDVMRFFFHVNN*RKFFHLSGARS Trigger: GCTCCGAGCTCCACTCAGGTGAAAGAATTTGCGGCAATTGTTGACGTGAAAGAAGAATCTCATTACATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000356957.7 ENST00000572732.1 |
||
| CDS TCA 72 bp | CTAGGTAATCTTTCTTTAATGAATGTAATGCTGAGGTaGAGAAGGTCAAATAACCAGGAGGCTGGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGNLSLMNVMLR*RRSNNQEAGVS Trigger: GCTCACCCCAGCCTCCTGGTTATTTGACCTTCTTCACCTCAGCATTACATTCATTAAAGAAAGATTACCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000283033.10 ENST00000575591.1 ENST00000576969.5 |
||
| CDS CCA 72 bp | TTTACCCATATGAAGTCAAGCAAAATGTACAATGCTTaGGGAAATAAACTGCCTGCAGTACCTAGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTHMKSSKMYNA*GNKLPAVPRVS Trigger: GCTCACCCTAGGTACTGCAGGCAGTTTATTTCCCCAAGCATTGTACATTTTGCTTGACTTCATATGGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572732.1 |
||
| CDS CCA 72 bp | TGTAAGAAACAAGCTTCACCTAGATTTGAAAGAGGATaGCTAAAAAGACTCATATGTAGAAGCTCTGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CKKQASPRFERG*LKRLICRSSES Trigger: AGACTCAGAGCTTCTACATATGAGTCTTTTTAGCCATCCTCTTTCAAATCTAGGTGAAGCTTGTTTCTTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570917.5 |
||