RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TXLNB (Homo sapiens)

Ensembl gene IDs: ENSG00000164440

Ensembl transcript IDs: ENST00000358430.8, ENST00000367652.4

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTAGCTCCCCTTTCCCACTTCCAACCGTTTCCTTGCAGGAAGCCTaGAATGGGATGCCCTGGCACATGAGGGGGTGGCAAAGCAATGGG +
Preference number: 1 (lower is better)
Translates to: PSSPFPLPTVSLQEA*NGMPWHMRGWQSNG
Trigger: CCCATTGCTTTGCCACCCCCTCATGTGCCAGGGCATCCCATTCCAGGCTTCCTGCAAGGAAACGGTTGGAAGTGGGAAAGGGGAGCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CCA 90 bp TCCTTGCAGGAAGCCTGGAATGGGATGCCCTGGCACATGAGGGGGTaGCAAAGCAATGGGCTGAGAAGTGTAGGAGAAGCAGCTCCAAGA +
Preference number: 1 (lower is better)
Translates to: SLQEAWNGMPWHMRG*QSNGLRSVGEAAPR
Trigger: TCTTGGAGCTGCTTCTCCTACACTTCTCAGCCCATTGCTTTGCCACCCCCTCATGTGCCAGGGCATCCCATTCCAGGCTTCCTGCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CCA 90 bp CCACTTCCAACCGTTTCCTTGCAGGAAGCCTGGAATGGGATGCCCTaGCACATGAGGGGGTGGCAAAGCAATGGGCTGAGAAGTGTAGGA +
Preference number: 1 (lower is better)
Translates to: PLPTVSLQEAWNGMP*HMRGWQSNGLRSVG
Trigger: TCCTACACTTCTCAGCCCATTGCTTTGCCACCCCCTCATGTGCCAGGGCATCCCATTCCAGGCTTCCTGCAAGGAAACGGTTGGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR TCA 90 bp TGCTGCCTGTTTCTCTTGCTAAATATTCAGACTGAGACTTTACTATaGCTAATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: CCLFLLLNIQTETLL*LILLHSWTFCLCSG
Trigger: CCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGATTAGTCATAGTAAAGTCTCAGTCTGAATATTTAGCAAGAGAAACAGGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR TCA 90 bp CTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTAAATATTCAGACTaGGACTTTACTATGACTAATCTTACTCCATTCTTGGACGTTCTG +
Preference number: 1 (lower is better)
Translates to: LWVPLLPVSLAKYSD*DFTMTNLTPFLDVL
Trigger: CAGAACGTCCAAGAATGGAGTAAGATTAGTCATAGTAAAGTCTCAGTCTGAATATTTAGCAAGAGAAACAGGCAGCAGAGGAACCCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CCA 90 bp TTGTACTTCTGGCCTAAAGAGAAATCCTCATGGCAGAAAACGTGTTaGTTTGTAAGCCTCATCACTGATATTGAGACCCAGTGTAGATTT +
Preference number: 1 (lower is better)
Translates to: LYFWPKEKSSWQKTC*FVSLITDIETQCRF
Trigger: AAATCTACACTGGGTCTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTTCTCTTTAGGCCAGAAGTACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTGGAATGGGATGCCCTaGCACATGAGGGGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPWNGMP*HMRGWQ
Trigger: TTGCCACCCCCTCATGTGCCAGGGCATCCCATTCCA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATGGCACATGAGGGGGTaGCAAAGCAATGGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAWHMRG*QSNGLR
Trigger: TCTCAGCCCATTGCTTTGCCACCCCCTCATGTGCCA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTGCAGGAAGCCTGGAATaGGATGCCCTGGCACATGAG +
Preference number: 2 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVAGSLE*DALAHE
Trigger: CTCATGTGCCAGGGCATCCCATTCCAGGCTTCCTGC...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR TCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAAGCCCCTTCTTAGTGTaGGGTCCCTTAACCCCTCAA +
Preference number: 2 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASPFLV*GPLTPQ
Trigger: TTGAGGGGTTAAGGGACCTCACACTAAGAAGGGGCT...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTGCACTTTGTGTGCCTTaGCAAACAGCCACATGCAAC +
Preference number: 2 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVALCVP*QTATCN
Trigger: GTTGCATGTGGCTGTTTGCCAAGGCACACAAAGTGC...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CAA 90 bp TCTTCCTTCCCTTTCCTCTCTCTCCCTCTCTTCTTTCCTGTTTCATaGTTGCAGCTATCCTTTACCCTAGGTAATTTATGTTGTCAGTAT +
Preference number: 2 (lower is better)
Translates to: SSFPFLSLPLFFPVS*LQLSFTLGNLCCQY
Trigger: ATACTGACAACATAAATTACCTAGGGTAAAGGATAGCTGCAACAATGAAACAGGAAAGAAGAGAGGGAGAGAGAGGAAAGGGAAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR TCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGACAAGCTGTTATGCTaGATATGCAAAGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: TNCMQFTILVAYGCCLQADKLLC*ICKEAG
Trigger: TCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAAGTGTTTCTAGCTTTTaGCTTCTCCTGAATCCTCAC +
Preference number: 2 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASVSSF*LLLNPH
Trigger: GTGAGGATTCAGGAGAAGGCAAAAGCTAGAAACACT...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATGGCAGAAAACGTGTTaGTTTGTAAGCCTCATCACT +
Preference number: 2 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAWQKTC*FVSLIT
Trigger: AGTGATGAGGCTTACAAACCAACACGTTTTCTGCCA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR TCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTCTGACAGCAAGAGATaGATATTATGTCTTGAGACA +
Preference number: 2 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSDSKR*ILCLET
Trigger: TGTCTCAAGACATAATATTCATCTCTTGCTGTCAGA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR TCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTGCTTTTGCCTTCTCCTaGATCCTCACCTATATTTCA +
Preference number: 2 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVAFAFS*ILTYIS
Trigger: TGAAATATAGGTGAGGATTCAGGAGAAGGCAAAAGC...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR GCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTTGTGTCCATGCTGTCTaGACAGATTGTAGTCTAACT +
Preference number: 2 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVCVHAV*TDCSLT
Trigger: AGTTAGACTACAATCTGTGCAGACAGCATGGACACA...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CCA 72 bp TGGGATGCCCTGGCACATGAGGGGGTGGCAAAGCAATaGGCTGAGAAGTGTAGGAGAAGCAGCTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: WDALAHEGVAKQ*AEKCRRSSSKR
Trigger: CCTCTTGGAGCTGCTTCTCCTACACTTCTCAGCCCATTGCTTTGCCACCCCCTCATGTGCCAGGGCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCCCTTGTGGTCATCTTaGTGTCCATGCTGTCTGCAC +
Preference number: 3 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPPLWSS*CPCCLH
Trigger: GTGCAGACAGCATGGACACAAAGATGACCACAAGGG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTTCTTTCCTGTTTCATaGTTGCAGCTATCCTTTACC +
Preference number: 3 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPFFPVS*LQLSFT
Trigger: GGTAAAGGATAGCTGCAACAATGAAACAGGAAAGAA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCTTCCAACCGTTTCCTaGCAGGAAGCCTGGAATGGG +
Preference number: 3 (lower is better)
Translates to: KSSWQKTCWFVSLITDIELPTVS*QEAWNG
Trigger: CCCATTCCAGGCTTCCTGCAAGGAAACGGTTGGAAG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR GCA 72 bp TGGGCCCCTTGTGGTCATCTTTGTGTCCATGCTGTCTaGACAGATTGTAGTCTAACTGCTTTTCTGCCATTT +
Preference number: 3 (lower is better)
Translates to: WAPCGHLCVHAV*TDCSLTAFLPF
Trigger: AAATGGCAGAAAAGCAGTTAGACTACAATCTGTGCAGACAGCATGGACACAAAGATGACCACAAGGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CCA 72 bp TGGCCTAAAGAGAAATCCTCATGGCAGAAAACGTGTTaGTTTGTAAGCCTCATCACTGATATTGAGACCCAG +
Preference number: 3 (lower is better)
Translates to: WPKEKSSWQKTC*FVSLITDIETQ
Trigger: CTGGGTCTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTTCTCTTTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTTCTGTTTTGGGCCCCTaGTGGTCATCTTTGTGTCCA +
Preference number: 3 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVSVLGP*WSSLCP
Trigger: TGGACACAAAGATGACCACAAGGGGCCCAAAACAGA...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTCTTGTAGCATATGGTaGCTGCCTACAAGCACTTTG +
Preference number: 3 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSCSIW*LPTSTL
Trigger: CAAAGTGCTTGTAGGCAGCAACCATATGCTACAAGA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCGCAGTAATGTTGAATTaGGCTGGATACCCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCAVMLN*AGYPVV
Trigger: AACCACAGGGTATCCAGCCAAATTCAACATTACTGC...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATTTCTCTTTTCTGTTTaGGGCCCCTTGTGGTCATCT +
Preference number: 3 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAFLFSV*GPLWSS
Trigger: AGATGACCACAAGGGGCCCAAAACAGAAAAGAGAAA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTGCCTCATCACTGATATaGAGACCCAGTGTAGATTTG +
Preference number: 3 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVASSLI*RPSVDL
Trigger: CAAATCTACACTGGGTCTCAATATCAGTGATGAGGC...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTATGGCAGAAAACGTGTaGGTTTGTAAGCCTCATCAC +
Preference number: 3 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVMAENV*VCKPHH
Trigger: GTGATGAGGCTTACAAACCAACACGTTTTCTGCCAT...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATTTCCTGTTTCATTGTaGCAGCTATCCTTTACCCTA +
Preference number: 3 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAFPVSL*QLSFTL
Trigger: TAGGGTAAAGGATAGCTGCAACAATGAAACAGGAAA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR TCA 72 bp CCTCTGCTGCCTGTTTCTCTTGCTAAATATTCAGACTaGGACTTTACTATGACTAATCTTACTCCATTCTTG +
Preference number: 3 (lower is better)
Translates to: PLLPVSLAKYSD*DFTMTNLTPFL
Trigger: CAAGAATGGAGTAAGATTAGTCATAGTAAAGTCTCAGTCTGAATATTTAGCAAGAGAAACAGGCAGCAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR TCA 72 bp TTTCTCTTGCTAAATATTCAGACTGAGACTTTACTATaGCTAATCTTACTCCATTCTTGGACGTTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: FLLLNIQTETLL*LILLHSWTFCL
Trigger: GAGGCAGAACGTCCAAGAATGGAGTAAGATTAGTCATAGTAAAGTCTCAGTCTGAATATTTAGCAAGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR TCA 72 bp TTCCATCTGAAACTCTGTCCAAGATATACATGGCTGTaGGTAATGTGTTTCTGTGAAAGTCTTTTGGATGAA +
Preference number: 3 (lower is better)
Translates to: FHLKLCPRYTWL*VMCFCESLLDE
Trigger: TTCATCCAAAAGACTTTCACAGAAACACATTACTCACAGCCATGTATATCTTGGACAGAGTTTCAGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTAATGTAATACTCATGTaGACAACCCCAAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVNVILM*TTPSVS
Trigger: AGAAACACTTGGGGTTGTCAACATGAGTATTACATT...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTGGTGTCAGCCACGTTaGGCGGCTGGGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPWCQPR*AAGAQL
Trigger: CAGCTGGGCCCCAGCCGCGCAACGTGGCTGACACCA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGTAGGGAGGCCTCGGTaGGAGCCTGTGGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPVGRPR*EPVGPD
Trigger: GTCAGGCCCCACAGGCTCCCACCGAGGCCTCCCTAC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGGAGCCTGTGGGGCCTaGCCGGAAGCTTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPGACGA*PEASAS
Trigger: AGAGGCAGAAGCTTCCGGTCAGGCCCCACAGGCTCC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCAGCTCCTCTGCTGCTaGTCGTGGGGGCTGCCTACT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPQLLCC*SWGLPT
Trigger: AGTAGGCAGCCCCCACGAGCAGCAGCAGAGGAGCTG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGGCTTCCAGGACGCCTaGTCAGCCTGTGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPGFQDA*SACAPT
Trigger: TGTTGGAGCACAGGCTGATCAGGCGTCCTGGAAGCC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCCTCTGAAGGCACGGTaGGGCTTAGTCGACGCCTTC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPPLKAR*GLVDAF
Trigger: GAAGGCGTCGACTAAGCCTCACCGTGCCTTCAGAGG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGGGAGACCCTCGCATTaGGTTTCTGCTCCCAACCCG +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPGRPSH*VSAPNP
Trigger: CGGGTTGGGAGCAGAAACCCAATGCGAGGGTCTCCC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCTCTTCTTCCTCACGTaGCCGCTGAAGCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPLFFLT*PLKRLF
Trigger: GAAGAGGCGCTTCAGCGGGCACGTGAGGAAGAAGAG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCTCTTCTGCTGCGCATaGTGGAGCAGGCACATCTGC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPLFCCA*WSRHIC
Trigger: GCAGATGTGCCTGCTCCAGCATGCGCAGCAGAAGAG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCTCTGGTGGTTGGACTaGGGTTGGAGAATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPLWWLD*GWRILA
Trigger: GGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTCCTTGCAGGAAGCCTaGAATGGGATGCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPSLQEA*NGMPWH
Trigger: GTGCCAGGGCATCCCATTCCAGGCTTCCTGCAAGGA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGCGTCAGCACTCTCCTaGGAACTGCCTATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPASALS*ELPISG
Trigger: ACCCGAAATAGGCAGTTCTCAGGAGAGTGCTGACGC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGAGGTTCAGCATCACTaGCTCCTTCGGCTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPEVQHH*LLRLQP
Trigger: AGGCTGAAGCCGAAGGAGGCAGTGATGCTGAACCTC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTACCATGGCTGCAACGTaGTCTTCTGCTGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPTMAAT*SSAAHA
Trigger: AGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTAGCCCCTTCTTAGTGTaGGGTCCCTTAACCCCTCAA +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPSPFLV*GPLTPQ
Trigger: TTGAGGGGTTAAGGGACCTCACACTAAGAAGGGGCT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTATCCTCGTTGTCAGGTaGTTCTGCATTCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPILVVR*FCILRL
Trigger: CAGCCTGAGAATGCAGAATCACCTGACAACGAGGAT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTTCCAACCGTTTCCTTaGAGGAAGCCTGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPFQPFP*RKPGMG
Trigger: TCCCATTCCAGGCTTCCTGCAAGGAAACGGTTGGAA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGCAGAGGGGGTTGCTCTaGCTCCTTGAGAGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKQRGLL*LLESGV
Trigger: GACGCCGCTCTCAAGGAGCCAGAGCAACCCCCTCTG...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGAGAATTACTGGCCTTaGAGGGAGGTTCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPENYWP*REVQHH
Trigger: GTGATGCTGAACCTCCCTCCAAGGCCAGTAATTCTC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTGCCACGTTGCGCGGCTaGGGCCCAGCTGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVATLRG*GPAEAP
Trigger: AGGGGCCTCAGCTGGGCCCCAGCCGCGCAACGTGGC...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGCACTTTGTGTGCCTTaGCAAACAGCCACATGCAAC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPALCVP*QTATCN
Trigger: GTTGCATGTGGCTGTTTGCCAAGGCACACAAAGTGC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTCCTCACGTGCCCGCTaGAGCGCCTCTTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKSSRAR*SASSFR
Trigger: TCTGAAGGAAGAGGCGCTTCAGCGGGCACGTGAGGA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTCAGAGATATCGGGGTaGACACTTGCCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPSEISG*TLASFS
Trigger: AGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGCATCCACCAGCTTCTaGTGCAGTTCTCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPASTSF*CSSLCL
Trigger: TAAACACAGAGAACTGCAGCAGAAGCTGGTGGATGC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCACTCTCCTGAGAACTaGCTATTTCGGGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPHSPEN*LFRVGF
Trigger: AAACCCAACCCGAAATAGGCAGTTCTCAGGAGAGTG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTCCGTGAGGGTACTCTaGAAATGGCTTGTGATTTCC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPSVRVL*KWLVIS
Trigger: GGAAATCACAAGCCATTTCCAGAGTACCCTCACGGA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCGTTGCTCTGGCTCCTTaGGAGCGGCGTCAGCACTCT +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCVALAP*ERRQHS
Trigger: AGAGTGCTGACGCCGCTCTCAAGGAGCCAGAGCAAC...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCCTTCGGCTTCAGCCTaGGGAGTTAGGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEPSASA*GVRGGR
Trigger: CCTGCCTCCCCTAACTCCTCAGGCTGAAGCCGAAGG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGACAAGCTGTTATGCTaGATATGCAAAGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPDKLLC*ICKEAG
Trigger: TCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTCTGAAGTTTCCACTCTaGTGCCTGGTTCAGCAAATA +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPLKFPL*CLVQQI
Trigger: TATTTGCTGAACCAGGCAGCAGAGTGGAAACTTCAG...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGCTGCTCGTGGGGGCTaGCTACTGGGCTCGCATGCA +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAAARGG*LLGSHA
Trigger: TGCATGCGAGCCCAGTAGGCAGCCCCCACGAGCAGC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATGGCAGCTCCTCTGCTaGTGCTCGTGGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAWQLLC*CSWGLP
Trigger: AGGCAGCCCCCACGAGCAGCAGCAGAGGAGCTGCCA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGTAGCATATGGTTGCTaGCTACAAGCACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPVAYGC*LQALCV
Trigger: CACACAAAGTGCTTGTAGGCAGCAACCATATGCTAC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCACTCGGTGGGAGCCTGTaGGGCCTGACCGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQALGGSL*GLTGSF
Trigger: GAAGCTTCCGGTCAGGCCCCACAGGCTCCCACCGAG...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTTCTGCTGCGCATGCTaGAGCAGGCACATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKFCCAC*SRHICL
Trigger: GAGGCAGATGTGCCTGCTCCAGCATGCGCAGCAGAA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGTGGGGGCTGCCTACTaGGCTCGCATGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAVGAAY*ARMQAP
Trigger: TGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCCAC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTGGAATGGGATGCCCTaGCACATGAGGGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKWNGMP*HMRGWQ
Trigger: TTGCCACCCCCTCATGTGCCAGGGCATCCCATTCCA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCAGAGCCCTCTTTCCCTaGTGTGCTGGCAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCRALFP*CAGSRP
Trigger: GGGTCTGCTGCCAGCACAGCAGGGAAAGAGGGCTCT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTCTGCATTCTCAGGCTaGTCACTGGCCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCSAFSG*SLALAE
Trigger: CTCTGCCAGGGCCAGTGAGCAGCCTGAGAATGCAGA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTAAGTTTCCACTCTGCTaGCTGGTTCAGCAAATATTC +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPKFPLC*LVQQIF
Trigger: GAATATTTGCTGAACCAGGCAGCAGAGTGGAAACTT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGCTCTTTGACAGTGGGTaGCTCTCCAGAAGCAACGGG +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKLFDSG*LSRSNG
Trigger: CCCGTTGCTTCTGGAGAGCCACCCACTGTCAAAGAG...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCTCTGCTGCTCGATCTaGCCCTGGATGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIELCCSI*PWMSVR
Trigger: CCTCACGGACATCCAGGGCCAGATCGAGCAGCAGAG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTTCCACTCTGCTGCCTaGTTCAGCAAATATTCCTTT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPFHSAA*FSKYSF
Trigger: AAAGGAATATTTGCTGAACCAGGCAGCAGAGTGGAA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCCGCATGCAGGCACCATaGCTGCAACGTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCRMQAP*LQRALL
Trigger: CAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCG...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCGACGCCTTCCAGATTaGTGTCAGCCACGTTGCGCG +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIERRLPD*CQPRCA
Trigger: CGCGCAACGTGGCTGACACCAATCTGGAAGGCGTCG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTGGCACATGAGGGGGTaGCAAAGCAATGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKWHMRG*QSNGLR
Trigger: TCTCAGCCCATTGCTTTGCCACCCCCTCATGTGCCA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCGCAGGAAGCCTGGAATaGGATGCCCTGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCAGSLE*DALAHE
Trigger: CTCATGTGCCAGGGCATCCCATTCCAGGCTTCCTGC...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
3UTR CAA 72 bp GCTCCAAGAGGTGAGCTTGTGTTTCTCTTTTCTGTTTaGGGCCCCTTGTGGTCATCTTTGTGTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: APRGELVFLFSV*GPLWSSLCPCC
Trigger: ACAGCATGGACACAAAGATGACCACAAGGGGCCCAAAACAGAAAAGAGAAACACAAGCTCACCTCTTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGGCCCTGGATGTCCGTaGGGGTACTCTGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAGPGCP*GYSGNG
Trigger: GCCATTTCCAGAGTACCCTCACGGACATCCAGGGCC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTTCAGCACTTTCGCCTaGAGTTTCCACTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKFSTFA*SFHSAA
Trigger: GGCAGCAGAGTGGAAACTTCAGGCGAAAGTGCTGAA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGATGATGAATTATCATaGAGGCTGTGGCCAGATTTT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPDDELS*RLWPDF
Trigger: AAAATCTGGCCACAGCCTTCATGATAATTCATCATC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGCAGGTTGGCTTCTTTaGCTAATCCTTTTAGGATTT +
Preference number: 4 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPAGWLL*LILLGF
Trigger: AAATCCTAAAAGGATTAGGCAAAGAAGCCAACCTGC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGGGATCAGAGGGGGTTaGTCTGGCTCCTTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAGIRGG*SGSLRA
Trigger: CGCTCTCAAGGAGCCAGAGCAACCCCCTCTGATCCC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCACGCCTGATCAGCCTGTaGTCCAACAGGGAGACCCTC +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQARLISL*SNRETL
Trigger: GAGGGTCTCCCTGTTGGAGCACAGGCTGATCAGGCG...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGAACGTGCTCTTCTGCTaGGCATGCTGGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIENVLFC*ACWSRH
Trigger: GTGCCTGCTCCAGCATGCGCAGCAGAAGAGCACGTT...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGTGCAACGTGCTCTTCTaGTGCGCATGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIECNVLF*CACWSR
Trigger: CCTGCTCCAGCATGCGCAGCAGAAGAGCACGTTGCA...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTGCAGGCACCATGGCTaGAACGTGCTCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCCRHHG*NVLFCC
Trigger: GCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTTACTGGCAGCTCCTCTaGTGCTGCTCGTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVYWQLL*CCSWGL
Trigger: CAGCCCCCACGAGCAGCAGCAGAGGAGCTGCCAGTA...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTGGACGTTCTGCCTCTaGAGTGGGGAAGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCWTFCL*SGEGDP
Trigger: AGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGTGCTCGATCTGGCCCTaGATGTCCGTGAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIECSIWP*MSVRVL
Trigger: GAGTACCCTCACGGACATCCAGGGCCAGATCGAGCA...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCCGGCAGGAGAATTACTaGCCTTGGAGGGAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCRQENY*PWREVQ
Trigger: CTGAACCTCCCTCCAAGGCCAGTAATTCTCCTGCCG...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGGTCTTGTTGTGTCTCTaGAGCTCCCGGCACAGACTC +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEVLLCL*SSRHRL
Trigger: GAGTCTGTGCCGGGAGCTGCAGAGACACAACAAGAC...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTGCAGGACTGTCTCTTaGTCCTTCAGCACTTTCGCC +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCCRTVS*SFSTFA
Trigger: GGCGAAAGTGCTGAAGGAGCAAGAGACAGTCCTGCA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTGTCCATTTCCTGTTTaGACGTGGCAAACACCTCGT +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKCPFPV*TWQTPR
Trigger: ACGAGGTGTTTGCCACGTTCAAACAGGAAATGGACA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCATCGGGGTGCACACTTaGCTCTTTCTCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCIGVHT*LFLWWL
Trigger: CAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGAT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATTTCGCTCACTCTGCTaGTCGATCTGGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAFRSLC*SIWPWM
Trigger: CATCCAGGGCCAGATCGAGCAGCAGAGTGAGCGAAA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCATATTTCGCTCACTCTaGTGCTCGATCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCIFRSL*CSIWPW
Trigger: CCAGGGCCAGATCGAGCAGCAGAGTGAGCGAAATAT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGATCATTTCTTGGGCCTaGTCAAGCTTTGCATCCACC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKIISWA*SSFAST
Trigger: GGTGGATGCAAAGCTTGAGCAGGCCCAAGAAATGAT...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTCTCGCATTGGGTTTCTaGTCCCAACCCGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVLALGF*SQPGRR
Trigger: TCTCCTGCCGGGTTGGGAGCAGAAACCCAATGCGAG...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCATTCTTGGACGTTCTaGCTCTGCAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEHSWTF*LCSGEG
Trigger: TCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGGGGTTGGAGAATCCTaGCCATCTTCCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAGVGES*PSSFSR
Trigger: CCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGTGGTTGGACTGGGGTTaGAGAATCCTGGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEWLDWG*RILAIF
Trigger: GAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCA...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTGGGTTTCTTTGGACTaGTGCGGGGTTGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCWVSLD*CGVDSG
Trigger: TCCAGAGTCAACCCCGCACCAGTCCAAAGAAACCCA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCACGGGTTGGGTTTCTTTaGACTGGTGCGGGGTTGACT +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQARVGFL*TGAGLT
Trigger: AGTCAACCCCGCACCAGTCCAAAGAAACCCAACCCG...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCCTGCCTATTTCGGGTTaGGTTTCTTTGGACTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCLPISG*VSLDWC
Trigger: GCACCAGTCCAAAGAAACCCAACCCGAAATAGGCAG...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCGGGGTGGCAAAGCAATaGGCTGAGAAGTGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCGVAKQ*AEKCRR
Trigger: TCTCCTACACTTCTCAGCCCATTGCTTTGCCACCCC...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTCTCTGAGCTCATACTaGTCGATGATGCTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKSLSSY*SMMLFS
Trigger: GCTGAAAAGCATCATCGATCAGTATGAGCTCAGAGA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCATCGGGCTTTCCATGTaGCTGTGTCCTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCIGLSM*LCPFPA
Trigger: AGCTGGAAAAGGACACAGCCACATGGAAAGCCCGAT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCAGCTCTGTGTTCTCCTaGCAGAGCTTCATATTTCGC +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSSVFS*QSFIFR
Trigger: GCGAAATATGAAGCTCTGTCAGGAGAACACAGAGCT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTCTGCGTCAATCTCTTaGTCCACAGAGACGTTTGAC +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSASIS*STETFD
Trigger: GTCAAACGTCTCTGTGGATCAAGAGATTGACGCAGA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCCCAGGCCATTGTGACTaGGTAATGATGAACTGTCAC +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCPGHCD*VMMNCH
Trigger: GTGACAGTTCATCATTACCCAGTCACAATGGCCTGG...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATCTTTCTCTGGTGGTTaGACTGGGGTTGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASFSGG*TGVGES
Trigger: GGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTGAGAGCTGTTCAGAGTaGTTAGCCTCCATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVESCSE*LASILG
Trigger: TCCCAAGATGGAGGCTAATCACTCTGAACAGCTCTC...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATTCTCCAGGCCATTGTaGCTGGGTAATGATGAACTG +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAFSRPL*LGNDEL
Trigger: CAGTTCATCATTACCCAGTCACAATGGCCTGGAGAA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGCCTCCTGGATTATGGTaGATATTTAGCTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKPPGLW*IFSSES
Trigger: TGATTCAGAGCTAAATATTCACCATAATCCAGGAGG...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTGTGTCCATGCTGTCTaGACAGATTGTAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCCVHAV*TDCSLT
Trigger: AGTTAGACTACAATCTGTGCAGACAGCATGGACACA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTACAAGCACTTTGTGTaGCTTGGCAAACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCYKHFV*LGKQPH
Trigger: ATGTGGCTGTTTGCCAAGGCACACAAAGTGCTTGTA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGGAATATTTGATTTACTaGCTTTGGGTTCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKEYLIY*LWVPLL
Trigger: CAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTC...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTGGCAGAAAACGTGTTaGTTTGTAAGCCTCATCACT +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCWQKTC*FVSLIT
Trigger: AGTGATGAGGCTTACAAACCAACACGTTTTCTGCCA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCATCTTACTCCATTCTTaGACGTTCTGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCILLHS*TFCLCS
Trigger: ACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCGCTCATACTGATCGATaGTGCTTTTCAGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCAHTDR*CFSAFL
Trigger: CAGAAAAGCTGAAAAGCATCATCGATCAGTATGAGC...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATCATCGGAGTTGTGCTaGCTTTGGTCATCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASSELC*LWSSFS
Trigger: TGAAAAGGATGACCAAAGTCAGCACAACTCCGATGA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGGAATGGTTTCCTGGATaGGTACTAGAGAATTTTGTT +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKEWFPG*VLENFV
Trigger: AACAAAATTCTCTAGTACTCATCCAGGAAACCATTC...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGACAAGTCATTCCATCTaGAACTCTGTCCAAGATATA +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKTSHSI*NSVQDI
Trigger: TATATCTTGGACAGAGTTTCAGATGGAATGACTTGT...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTTTTCTTCCGGTGTTTaGAACTTGTTCAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKFSSGV*NLFRFC
Trigger: GCAAAATCTGAACAAGTTGCAAACACCGGAAGAAAA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTTCTTTAGCTCTCAGTaGTTTCTCTTCAATCATGTC +
Preference number: 4 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKFFSSQ*FLFNHV
Trigger: GACATGATTGAAGAGAAAGCACTGAGAGCTAAAGAA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCTGGGTGTAATTTCCTaGTACAAAGGAGAAATTGGG +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIELGVIS*YKGEIG
Trigger: CCCAATTTCTCCTTTGTAGCAGGAAATTACACCCAG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCTTGTAGCATATGGTTaGTGCCTACAAGCACTTTGT +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIELVAYG*CLQALC
Trigger: ACAAAGTGCTTGTAGGCAGCAACCATATGCTACAAG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTTTGGGTTCCTCTGCTaGCTGTTTCTCTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCFGFLC*LFLLLN
Trigger: ATTTAGCAAGAGAAACAGGCAGCAGAGGAACCCAAA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATCCTTCATCATTTCTTaGGCCTGCTCAAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASFIIS*ACSSFA
Trigger: TGCAAAGCTTGAGCAGGCCCAAGAAATGATGAAGGA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTTTTTCACGGCGGTTTaGACACTATTAACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCFFTAV*TLLTSS
Trigger: AGAGGAGGTTAATAGTGTCCAAACCGCCGTGAAAAA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCAGATATACATGGCTGTaGGTAATGTGTTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCRYTWL*VMCFCE
Trigger: TTCACAGAAACACATTACTCACAGCCATGTATATCT...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGAATATTTTGTCCAGATaGTCCTCTCTGAGCTCATAC +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIENILSR*SSLSSY
Trigger: GTATGAGCTCAGAGAGGAGCATCTGGACAAAATATT...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGTTTGCATTAGCAGGTTaGCTTCTTTGCCTAATCCTT +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEFALAG*LLCLIL
Trigger: AAGGATTAGGCAAAGAAGCCAACCTGCTAATGCAAA...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATTCTTTTCCAATTTTTaGTCCTTATTGCTGACGGGC +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAFFSNF*SLLLTG
Trigger: GCCCGTCAGCAATAAGGAGCAAAAATTGGAAAAGAA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGAACTTGTTCAGATTTTaGATTAGCAGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSSWQKTCWFVSLITDIENLFRF*ISRLAS
Trigger: AGAAGCCAACCTGCTAATGCAAAATCTGAACAAGTT...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCAGCTTTAACTTCTTTTaGTCAGTACGATGTTCATCC +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSFNFF*SVRCSS
Trigger: GGATGAACATCGTACTGAGCAAAAGAAGTTAAAGCT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTAGTGTTTCTAGCTTTTaGCTTCTCCTGAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVSVSSF*LLLNPH
Trigger: GTGAGGATTCAGGAGAAGGCAAAAGCTAGAAACACT...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR GCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATGGCAAACAGCCACATaGAACATTGAAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAWQTAT*NIEEWF
Trigger: AAACCATTCTTCAATGTTGCATGTGGCTGTTTGCCA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTTAGTTAGTGTGCTCTaGAATTCTTCAAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCLVSVL*NSSNLP
Trigger: AGGAAGGTTTGAAGAATTCCAGAGCACACTAACTAA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CCA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAAAAGAGAAATCCTCATaGCAGAAAACGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAKEKSS*QKTCWF
Trigger: AAACCAACACGTTTTCTGCCATGAGGATTTCTCTTT...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR TCA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTTCTGACAGCAAGAGATaGATATTATGTCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVSDSKR*ILCLET
Trigger: TGTCTCAAGACATAATATTCATCTCTTGCTGTCAGA...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 90 bp GCTGAGGCCCCTACTGGCAGCTCCTCTGCTGCTGCTCGTGGGGGCTaGCTACTGGGCTCGCATGCAGGCACCATGGCTGCAACGTGCTCT +
Preference number: 5 (lower is better)
Translates to: AEAPTGSSSAAARGG*LLGSHAGTMAATCS
Trigger: AGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCCACGAGCAGCAGCAGAGGAGCTGCCAGTAGGGGCCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp GGCCTCGGTGGGAGCCTGTGGGGCCTGACCGGAAGCTTCTGCCTCTaGCTTCCAGGACGCCTGATCAGCCTGTGCTCCAACAGGGAGACC +
Preference number: 5 (lower is better)
Translates to: GLGGSLWGLTGSFCL*LPGRLISLCSNRET
Trigger: GGTCTCCCTGTTGGAGCACAGGCTGATCAGGCGTCCTGGAAGCCAGAGGCAGAAGCTTCCGGTCAGGCCCCACAGGCTCCCACCGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 90 bp ACGGTGAGGCTTAGTCGACGCCTTCCAGATTGGTGTCAGCCACGTTaGGCGGCTGGGGCCCAGCTGAGGCCCCTACTGGCAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: TVRLSRRLPDWCQPR*AAGAQLRPLLAAPL
Trigger: CAGAGGAGCTGCCAGTAGGGGCCTCAGCTGGGCCCCAGCCGCGCAACGTGGCTGACACCAATCTGGAAGGCGTCGACTAAGCCTCACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 90 bp GGGGGCTGCCTACTGGGCTCGCATGCAGGCACCATGGCTGCAACGTaGTCTTCTGCTGCGCATGCTGGAGCAGGCACATCTGCCTCCATC +
Preference number: 5 (lower is better)
Translates to: GGCLLGSHAGTMAAT*SSAAHAGAGTSASI
Trigger: GATGGAGGCAGATGTGCCTGCTCCAGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp CTGCTGCTCGTGGGGGCTGCCTACTGGGCTCGCATGCAGGCACCATaGCTGCAACGTGCTCTTCTGCTGCGCATGCTGGAGCAGGCACAT +
Preference number: 5 (lower is better)
Translates to: LLLVGAAYWARMQAP*LQRALLLRMLEQAH
Trigger: ATGTGCCTGCTCCAGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCCACGAGCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 90 bp ACCCGGCAGGAGAATTACTGGCCTTGGAGGGAGGTTCAGCATCACTaGCTCCTTCGGCTTCAGCCTGAGGAGTTAGGGGAGGCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: TRQENYWPWREVQHH*LLRLQPEELGEAGD
Trigger: GTCCCCTGCCTCCCCTAACTCCTCAGGCTGAAGCCGAAGGAGGCAGTGATGCTGAACCTCCCTCCAAGGCCAGTAATTCTCCTGCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 90 bp CTGATCAGCCTGTGCTCCAACAGGGAGACCCTCGCATTGGGTTTCTaGTCCCAACCCGGCAGGAGAATTACTGGCCTTGGAGGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: LISLCSNRETLALGF*SQPGRRITGLGGRF
Trigger: GAACCTCCCTCCAAGGCCAGTAATTCTCCTGCCGGGTTGGGAGCAGAAACCCAATGCGAGGGTCTCCCTGTTGGAGCACAGGCTGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp CGCATTGGGTTTCTGCTCCCAACCCGGCAGGAGAATTACTGGCCTTaGAGGGAGGTTCAGCATCACTGCCTCCTTCGGCTTCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RIGFLLPTRQENYWP*REVQHHCLLRLQPE
Trigger: CTCAGGCTGAAGCCGAAGGAGGCAGTGATGCTGAACCTCCCTCCAAGGCCAGTAATTCTCCTGCCGGGTTGGGAGCAGAAACCCAATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGGTTGCTCTGGCTCCTaGAGAGCGGCGTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPGCSGS*RAASAL
Trigger: GAGTGCTGACGCCGCTCTCAAGGAGCCAGAGCAACC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 90 bp TCTCTGAATCCCGTGAAGGGATCAGAGGGGGTTGCTCTGGCTCCTTaGGAGCGGCGTCAGCACTCTCCTGAGAACTGCCTATTTCGGGTT +
Preference number: 5 (lower is better)
Translates to: SLNPVKGSEGVALAP*ERRQHSPENCLFRV
Trigger: AACCCGAAATAGGCAGTTCTCAGGAGAGTGCTGACGCCGCTCTCAAGGAGCCAGAGCAACCCCCTCTGATCCCTTCACGGGATTCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTTGCTGACGGGCTCTTaGACAGTGGGTGGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPLLTGS*TVGGSP
Trigger: TGGAGAGCCACCCACTGTCAAAGAGCCCGTCAGCAA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 90 bp ATGCTGAATATGCAAAGAGGCAGGAAGAAGCCTCTGAAGGCACGGTaGGGCTTAGTCGACGCCTTCCAGATTGGTGTCAGCCACGTTGCG +
Preference number: 5 (lower is better)
Translates to: MLNMQRGRKKPLKAR*GLVDAFQIGVSHVA
Trigger: CGCAACGTGGCTGACACCAATCTGGAAGGCGTCGACTAAGCCTCACCGTGCCTTCAGAGGCTTCTTCCTGCCTCTTTGCATATTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 90 bp TTCCAGCTGTCGATTCAGCTCTTCAGAGATATCGGGGTGCACACTTaGCTCTTTCTCTGGTGGTTGGACTGGGGTTGGAGAATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FQLSIQLFRDIGVHT*LFLWWLDWGWRILA
Trigger: GGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTGAATCGACAGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp AGAGATATCGGGGTGCACACTTGCCTCTTTCTCTGGTGGTTGGACTaGGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAGGCCATTGTG +
Preference number: 5 (lower is better)
Translates to: RDIGVHTCLFLWWLD*GWRILAIFLLQAIV
Trigger: CACAATGGCCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp TCTTCAGAGATATCGGGGTGCACACTTGCCTCTTTCTCTGGTGGTTaGACTGGGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SSEISGCTLASFSGG*TGVGESWPSSFSRP
Trigger: TGGCCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp CAGCTCTTCAGAGATATCGGGGTGCACACTTGCCTCTTTCTCTGGTaGTTGGACTGGGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QLFRDIGVHTCLFLW*LDWGWRILAIFLLQ
Trigger: CTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp GGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAGGCCATTGTGACTaGGTAATGATGAACTGTCACCTGGAGGTGTTGACTGTCGTTCCG +
Preference number: 5 (lower is better)
Translates to: GLENPGHLPSPGHCD*VMMNCHLEVLTVVP
Trigger: CGGAACGACAGTCAACACCTCCAGGTGACAGTTCATCATTACCCAGTCACAATGGCCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 90 bp ACTGGGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAGGCCATTGTaGCTGGGTAATGATGAACTGTCACCTGGAGGTGTTGACTGTCGT +
Preference number: 5 (lower is better)
Translates to: TGVGESWPSSFSRPL*LGNDELSPGGVDCR
Trigger: ACGACAGTCAACACCTCCAGGTGACAGTTCATCATTACCCAGTCACAATGGCCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 90 bp ATTCAGCTCTTCAGAGATATCGGGGTGCACACTTGCCTCTTTCTCTaGTGGTTGGACTGGGGTTGGAGAATCCTGGCCATCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: IQLFRDIGVHTCLFL*WLDWGWRILAIFLL
Trigger: GAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTATTCCTTTTCTCGTTaGTGTCGCTCCTCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPYSFSR*CRSSAS
Trigger: GGAAGCGGAGGAGCGACACAAACGAGAAAAGGAATA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTTCCTTCATCATTTCTaGGGCCTGCTCAAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPFLHHF*GLLKLC
Trigger: GCAAAGCTTGAGCAGGCCCAAGAAATGATGAAGGAA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 90 bp TCACCTGGAGGTGTTGACTGTCGTTCCGCTGAGAGCTGTTCAGAGTaGTTAGCCTCCATCTTGGGAGTAGTATCAGAAGGCAAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: SPGGVDCRSAESCSE*LASILGVVSEGKKL
Trigger: TAGCTTCTTGCCTTCTGATACTACTCCCAAGATGGAGGCTAATCACTCTGAACAGCTCTCAGCGGAACGACAGTCAACACCTCCAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTATGGCAGAAAACGTGTaGGTTTGTAAGCCTCATCAC +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPMAENV*VCKPHH
Trigger: GTGATGAGGCTTACAAACCAACACGTTTTCTGCCAT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTTCTTGTAGCATATGGTaGCTGCCTACAAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPSCSIW*LPTSTL
Trigger: CAAAGTGCTTGTAGGCAGCAACCATATGCTACAAGA...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTAATTTTTGCTCCTTATaGCTGACGGGCTCTTTGACA +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPNFCSL*LTGSLT
Trigger: TGTCAAAGAGCCCGTCAGCAATAAGGAGCAAAAATT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTGGAGTTGTGCTGACTTaGGTCATCCTTTTCAGATAT +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPGVVLT*VILFRY
Trigger: ATATCTGAAAAGGATGACCAAAGTCAGCACAACTCC...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTCGGGTTGGGTTTCTTaGGACTGGTGCGGGGTTGAC +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCSGWVS*DWCGVD
Trigger: GTCAACCCCGCACCAGTCCAAAGAAACCCAACCCGA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGAGGGATCAGAGGGGGTaGCTCTGGCTCCTTGAGAGC +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIERDQRG*LWLLES
Trigger: GCTCTCAAGGAGCCAGAGCAACCCCCTCTGATCCCT...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ATCTTACTCCATTCTTGGACGTTCTGCCTCTGCAGTGGGGAAGGAGACCCTCCTAGACTTGCAGTAATGTaGAATTTGGCTGGATACCCT +
Preference number: 5 (lower is better)
Translates to: ILLHSWTFCLCSGEGDPPRLAVM*NLAGYP
Trigger: AGGGTATCCAGCCAAATTCAACATTACTGCAAGTCT...AGGAGGGTCTCCTTCCCCACTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAAGGGAGACCCTCGCATaGGGTTTCTGCTCCCAACCC +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQARETLA*GFCSQP
Trigger: GGGTTGGGAGCAGAAACCCAATGCGAGGGTCTCCCT...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATCGACGCCTTCCAGATaGGTGTCAGCCACGTTGCGC +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASTPSR*VSATLR
Trigger: GCGCAACGTGGCTGACACCAATCTGGAAGGCGTCGA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 90 bp ACTATTAACCTCCTCTGCGTCAATCTCTTGATCCACAGAGACGTTTaGCTCTGGCTCTTCATCGGAGTTGTGCTGACTTTGGTCATCCTT +
Preference number: 5 (lower is better)
Translates to: TINLLCVNLLIHRDV*LWLFIGVVLTLVIL
Trigger: AAGGATGACCAAAGTCAGCACAACTCCGATGAAGAGCCAGAGTCAAACGTCTCTGTGGATCAAGAGATTGACGCAGAGGAGGTTAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCGATCCACAGAGACGTTaGACTCTGGCTCTTCATCGG +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCDPQRR*TLALHR
Trigger: CCGATGAAGAGCCAGAGTCAAACGTCTCTGTGGATC...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTGGACTGGTGCGGGGTaGACTCTGGATGATGAATTA +
Preference number: 5 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKWTGAG*TLDDEL
Trigger: TAATTCATCATCCAGAGTCAACCCCGCACCAGTCCA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATGTCACCTGGAGGTGTaGACTGTCGTTCCGCTGAGA +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQACHLEV*TVVPLR
Trigger: TCTCAGCGGAACGACAGTCAACACCTCCAGGTGACA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCTCTTTCTCTGGTGGTaGGACTGGGGTTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIELFLWW*DWGWRI
Trigger: GATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTTCCAGCCTCTTCAGTaGTTTCCTCACAGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCFQPLQ*FPHSPH
Trigger: ATGGGGACTGTGAGGAAACAACTGAAGAGGCTGGAA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGGGAGAATTACTGGCCTaGGAGGGAGGTTCAGCATCA +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEGELLA*EGGSAS
Trigger: TGATGCTGAACCTCCCTCCAAGGCCAGTAATTCTCC...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCCCTTGTGGTCATCTTaGTGTCCATGCTGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEPLWSS*CPCCLH
Trigger: GTGCAGACAGCATGGACACAAAGATGACCACAAGGG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCACTTCCAACCGTTTCCTaGCAGGAAGCCTGGAATGGG +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQALPTVS*QEAWNG
Trigger: CCCATTCCAGGCTTCCTGCAAGGAAACGGTTGGAAG...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp GCCTTTTTCGGAAGACAAGCTGTTATGCTGAATATGCAAAGAGGCAGGAAGAAGTTATGTCTTGAGACATaGGTAGTGCAAGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: AFFGRQAVMLNMQRGRKKLCLET*VVQEAG
Trigger: CCCTGCCTCTTGCACTACCAATGTCTCAAGACATAA...CTTCTTCCTGCCTCTTTGCATATTCAGCATAACAGCTTGTCTTCCGAAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGCTGCCTACAAGCACTTaGTGTGCCTTGGCAAACAGC +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIELPTST*CALANS
Trigger: GCTGTTTGCCAAGGCACACAAAGTGCTTGTAGGCAG...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTCTTCCTTCAGAGTCTaGTTGTGTCTCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSSFRV*LCLCSS
Trigger: GGAGCTGCAGAGACACAACAAGACTCTGAAGGAAGA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCGTGGCAAACACCTCGTaGCTTTTAGTTAGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCVANTS*LLVSVL
Trigger: GAGCACACTAACTAAAAGCAACGAGGTGTTTGCCAC...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTTGTCCATTTCCTGTTaGAACGTGGCAAACACCTCG +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCLSISC*NVANTS
Trigger: CGAGGTGTTTGCCACGTTCAAACAGGAAATGGACAA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCACTGCCTATTTCGGGTaGGGTTTCTTTGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCTAYFG*GFFGLV
Trigger: CACCAGTCCAAAGAAACCCAACCCGAAATAGGCAGT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTCTGTTTTGGGCCCCTaGTGGTCATCTTTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSVLGP*WSSLCP
Trigger: TGGACACAAAGATGACCACAAGGGGCCCAAAACAGA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTTATCGGGGTGCACACTaGCCTCTTTCTCTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVYRGAH*PLSLVV
Trigger: AACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATA...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTCAGTCCCCATCCTCGTaGTCAGGTGATTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVQSPSS*SGDSAF
Trigger: GAATGCAGAATCACCTGACAACGAGGATGGGGACTG...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCACACAGACTCTCCAATTaGCTTCGAGCGAGGATAGCT +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAHRLSN*LRARIA
Trigger: AGCTATCCTCGCTCGAAGCAAATTGGAGAGTCTGTG...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTTTCTCTTTTCTGTTTaGGGCCCCTTGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCFLFSV*GPLWSS
Trigger: AGATGACCACAAGGGGCCCAAAACAGAAAAGAGAAA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCAATCTTACTCCATTCTaGGACGTTCTGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCNLTPF*DVLPLQ
Trigger: CTGCAGAGGCAGAACGTCCAAGAATGGAGTAAGATT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGTTTGATTTACTGCCTTaGGGTTCCTCTGCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEFDLLP*GSSAAC
Trigger: ACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAA...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCATTTTTCACGGCGGTTaGGACACTATTAACCTCCTC +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCIFHGG*DTINLL
Trigger: GAGGAGGTTAATAGTGTCCAAACCGCCGTGAAAAAT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGGCCTCATCACTGATATaGAGACCCAGTGTAGATTTG +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEASSLI*RPSVDL
Trigger: CAAATCTACACTGGGTCTCAATATCAGTGATGAGGC...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAAATCTCTAAGACTTGCAGTAATGTTGAATTTGGCTGGATACCCTGTGGTTAGCACTTTGTGTGCCTaGGCAAACAGCCACATGCAA +
Preference number: 5 (lower is better)
Translates to: FKSLRLAVMLNLAGYPVVSTLCA*ANSHMQ
Trigger: TTGCATGTGGCTGTTTGCCAAGGCACACAAAGTGCT...AACCACAGGGTATCCAGCCAAATTCAACATTACTGCAAGTCTTAGAGATTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTCCTGCCTAGCAACTTaGTTATTATCCTCACTGTCT +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCSCLAT*LLSSLS
Trigger: AGACAGTGAGGATAATAACAAAGTTGCTAGGCAGGA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCAGCAGGTTGGCTTCTTaGCCTAATCCTTTTAGGATT +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCSRLAS*PNPFRI
Trigger: AATCCTAAAAGGATTAGGCAAAGAAGCCAACCTGCT...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTTTTGCATTAGCAGGTaGGCTTCTTTGCCTAATCCT +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCFCISR*ASLPNP
Trigger: AGGATTAGGCAAAGAAGCCAACCTGCTAATGCAAAA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AAATCCTCATGGCAGAAAACGTGTTGGTTTGTAAGCCTCATCACTGATATTGAGATGTCCAACAGAGCTTaGTTACAGTTCTCAAATCGG +
Preference number: 5 (lower is better)
Translates to: KSSWQKTCWFVSLITDIEMSNRA*LQFSNR
Trigger: CCGATTTGAGAACTGTAACAAAGCTCTGTTGGACAT...CTCAATATCAGTGATGAGGCTTACAAACCAACACGTTTTCTGCCATGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTTTCCTGTTTCATTGTaGCAGCTATCCTTTACCCTA +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCFPVSL*QLSFTL
Trigger: TAGGGTAAAGGATAGCTGCAACAATGAAACAGGAAA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp AGTCCGAACTCTCTTCGGATTTATAGAGCATTAGTCAACCATAGTCTCAAGTGCTTCTTTCCTGTTTCATaGTTGCAGCTATCCTTTACC +
Preference number: 5 (lower is better)
Translates to: SPNSLRIYRALVNHSLKCFFPVS*LQLSFT
Trigger: GGTAAAGGATAGCTGCAACAATGAAACAGGAAAGAA...GCACTTGAGACTATGGTTGACTAATGCTCTATAAATCCGAAGAGAGTTCGGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCACAGCCACATGCAACATaGAAGAATGGTTTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAQPHAT*KNGFLD
Trigger: ATCCAGGAAACCATTCTTCAATGTTGCATGTGGCTG...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAGCAGTAATGTTGAATTaGGCTGGATACCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQAAVMLN*AGYPVV
Trigger: AACCACAGGGTATCCAGCCAAATTCAACATTACTGC...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCATCCGGTGTTTGCAACTaGTTCAGATTTTGCATTAGC +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQASGVCN*FRFCIS
Trigger: GCTAATGCAAAATCTGAACAAGTTGCAAACACCGGA...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp TTTAGAATATTTGATTTACTGCCTTTGGGTTCCTCTGCTGCCTGTTTCTCTTGCTGCTATCTGTATGTTTaGTTGCCCTTTGGGAAAATT +
Preference number: 5 (lower is better)
Translates to: FRIFDLLPLGSSAACFSCCYLYV*LPFGKI
Trigger: AATTTTCCCAAAGGGCAACAAAACATACAGATAGCA...GCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGTAAATCAAATATTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS-3UTR CAA 90 bp ACAAACTGTATGCAGTTTACAATTCTTGTAGCATATGGTTGCTGCCTACAAGCAAATGTAATACTCATGTaGACAACCCCAAGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: TNCMQFTILVAYGCCLQANVILM*TTPSVS
Trigger: AGAAACACTTGGGGTTGTCAACATGAGTATTACATT...TGCTTGTAGGCAGCAACCATATGCTACAAGAATTGTAAACTGCATACAGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp CCTACTGGCAGCTCCTCTGCTGCTGCTCGTGGGGGCTaGCTACTGGGCTCGCATGCAGGCACCATGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PTGSSSAAARGG*LLGSHAGTMAA
Trigger: TGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCCACGAGCAGCAGCAGAGGAGCTGCCAGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp ACGCCTTCCAGATTGGTGTCAGCCACGTTGCGCGGCTaGGGCCCAGCTGAGGCCCCTACTGGCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: TPSRLVSATLRG*GPAEAPTGSSS
Trigger: AGAGGAGCTGCCAGTAGGGGCCTCAGCTGGGCCCCAGCCGCGCAACGTGGCTGACACCAATCTGGAAGGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp GGGCTGCCTACTGGGCTCGCATGCAGGCACCATGGCTaGAACGTGCTCTTCTGCTGCGCATGCTGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GLPTGLACRHHG*NVLFCCACWSR
Trigger: CCTGCTCCAGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp TGCTGCTGCTCGTGGGGGCTGCCTACTGGGCTCGCATaGAGGCACCATGGCTGCAACGTGCTCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CCCSWGLPTGLA*RHHGCNVLFCC
Trigger: GCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCCACGAGCAGCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp CTTAGTCGACGCCTTCCAGATTGGTGTCAGCCACGTTaGGCGGCTGGGGCCCAGCTGAGGCCCCTACTGGCA +
Preference number: 6 (lower is better)
Translates to: LSRRLPDWCQPR*AAGAQLRPLLA
Trigger: TGCCAGTAGGGGCCTCAGCTGGGCCCCAGCCGCGCAACGTGGCTGACACCAATCTGGAAGGCGTCGACTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp GTGGGGGCTGCCTACTGGGCTCGCATGCAGGCACCATaGCTGCAACGTGCTCTTCTGCTGCGCATGCTGGAG +
Preference number: 6 (lower is better)
Translates to: VGAAYWARMQAP*LQRALLLRMLE
Trigger: CTCCAGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAGGCAGCCCCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 72 bp CCCGTGAAGGGATCAGAGGGGGTTGCTCTGGCTCCTTaGGAGCGGCGTCAGCACTCTCCTGAGAACTGCCTA +
Preference number: 6 (lower is better)
Translates to: PVKGSEGVALAP*ERRQHSPENCL
Trigger: TAGGCAGTTCTCAGGAGAGTGCTGACGCCGCTCTCAAGGAGCCAGAGCAACCCCCTCTGATCCCTTCACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp GGACTCTCTGAATCCCGTGAAGGGATCAGAGGGGGTTaGTCTGGCTCCTTGAGAGCGGCGTCAGCACTCTCC +
Preference number: 6 (lower is better)
Translates to: GLSESREGIRGG*SGSLRAASALS
Trigger: GGAGAGTGCTGACGCCGCTCTCAAGGAGCCAGAGCAACCCCCTCTGATCCCTTCACGGGATTCAGAGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp CTCGCATGCAGGCACCATGGCTGCAACGTGCTCTTCTaGTGCGCATGCTGGAGCAGGCACATCTGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: LACRHHGCNVLF*CACWSRHICLH
Trigger: ATGGAGGCAGATGTGCCTGCTCCAGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp CTACTGGGCTCGCATGCAGGCACCATGGCTGCAACGTaGTCTTCTGCTGCGCATGCTGGAGCAGGCACATCT +
Preference number: 6 (lower is better)
Translates to: LLGSHAGTMAAT*SSAAHAGAGTS
Trigger: AGATGTGCCTGCTCCAGCATGCGCAGCAGAAGAGCACGTTGCAGCCATGGTGCCTGCATGCGAGCCCAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 90 bp CCAGGACGCCTGATCAGCCTGTGCTCCAACAGGGAGACCCTCGCATaGGGTTTCTGCTCCCAACCCGGCAGGAGAATTACTGGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: PGRLISLCSNRETLA*GFCSQPGRRITGLG
Trigger: TCCAAGGCCAGTAATTCTCCTGCCGGGTTGGGAGCAGAAACCCAATGCGAGGGTCTCCCTGTTGGAGCACAGGCTGATCAGGCGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp TTCTGCCTCTGGCTTCCAGGACGCCTGATCAGCCTGTaGTCCAACAGGGAGACCCTCGCATTGGGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: FCLWLPGRLISL*SNRETLALGFC
Trigger: GCAGAAACCCAATGCGAGGGTCTCCCTGTTGGAGCACAGGCTGATCAGGCGTCCTGGAAGCCAGAGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp CCATCCTCGTTGTCAGGTGATTCTGCATTCTCAGGCTaGTCACTGGCCCTGGCAGAGCCCTCTTTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: PSSLSGDSAFSG*SLALAEPSFPA
Trigger: AGCAGGGAAAGAGGGCTCTGCCAGGGCCAGTGAGCAGCCTGAGAATGCAGAATCACCTGACAACGAGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp CTGTGCTCCAACAGGGAGACCCTCGCATTGGGTTTCTaGTCCCAACCCGGCAGGAGAATTACTGGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: LCSNRETLALGF*SQPGRRITGLG
Trigger: TCCAAGGCCAGTAATTCTCCTGCCGGGTTGGGAGCAGAAACCCAATGCGAGGGTCTCCCTGTTGGAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp GAGAATTACTGGCCTTGGAGGGAGGTTCAGCATCACTaGCTCCTTCGGCTTCAGCCTGAGGAGTTAGGGGAG +
Preference number: 6 (lower is better)
Translates to: ENYWPWREVQHH*LLRLQPEELGE
Trigger: CTCCCCTAACTCCTCAGGCTGAAGCCGAAGGAGGCAGTGATGCTGAACCTCCCTCCAAGGCCAGTAATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp GGGGTGCACACTTGCCTCTTTCTCTGGTGGTTGGACTaGGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: GVHTCLFLWWLD*GWRILAIFLLQ
Trigger: CTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 90 bp TATCGGGGTGCACACTTGCCTCTTTCTCTGGTGGTTGGACTGGGGTaGGAGAATCCTGGCCATCTTCCTTCTCCAGGCCATTGTGACTGG +
Preference number: 6 (lower is better)
Translates to: YRGAHLPLSLVVGLG*ENPGHLPSPGHCDW
Trigger: CCAGTCACAATGGCCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 90 bp CTCTTCAGAGATATCGGGGTGCACACTTGCCTCTTTCTCTGGTGGTaGGACTGGGGTTGGAGAATCCTGGCCATCTTCCTTCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LFRDIGVHTCLFLWW*DWGWRILAIFLLQA
Trigger: GGCCTGGAGAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp ATTGGGTTTCTGCTCCCAACCCGGCAGGAGAATTACTaGCCTTGGAGGGAGGTTCAGCATCACTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: IGFLLPTRQENY*PWREVQHHCLL
Trigger: AAGGAGGCAGTGATGCTGAACCTCCCTCCAAGGCCAGTAATTCTCCTGCCGGGTTGGGAGCAGAAACCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 90 bp CTTCCAGCTGTCGATTCAGCTCTTCAGAGATATCGGGGTGCACACTaGCCTCTTTCTCTGGTGGTTGGACTGGGGTTGGAGAATCCTGGC +
Preference number: 6 (lower is better)
Translates to: LPAVDSALQRYRGAH*PLSLVVGLGLENPG
Trigger: GCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTGAATCGACAGCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp TCCAGCTGTCGATTCAGCTCTTCAGAGATATCGGGGTaGACACTTGCCTCTTTCTCTGGTGGTTGGACTGGG +
Preference number: 6 (lower is better)
Translates to: SSCRFSSSEISG*TLASFSGGWTG
Trigger: CCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTGAATCGACAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp ATATCGGGGTGCACACTTGCCTCTTTCTCTGGTGGTTaGACTGGGGTTGGAGAATCCTGGCCATCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: ISGCTLASFSGG*TGVGESWPSSF
Trigger: GAAGGAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp AGAGATATCGGGGTGCACACTTGCCTCTTTCTCTGGTaGTTGGACTGGGGTTGGAGAATCCTGGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: RDIGVHTCLFLW*LDWGWRILAIF
Trigger: GAAGATGGCCAGGATTCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp GTCGATTCAGCTCTTCAGAGATATCGGGGTGCACACTaGCCTCTTTCTCTGGTGGTTGGACTGGGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: VDSALQRYRGAH*PLSLVVGLGLE
Trigger: CTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTGAATCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp TTGTGTCTCTGCAGCTCCCGGCACAGACTCTCCAATTaGCTTCGAGCGAGGATAGCTCTGCTGTGTTCACCT +
Preference number: 6 (lower is better)
Translates to: LCLCSSRHRLSN*LRARIALLCSP
Trigger: AGGTGAACACAGCAGAGCTATCCTCGCTCGAAGCAAATTGGAGAGTCTGTGCCGGGAGCTGCAGAGACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp TCGATTCAGCTCTTCAGAGATATCGGGGTGCACACTTaGCTCTTTCTCTGGTGGTTGGACTGGGGTTGGAGA +
Preference number: 6 (lower is better)
Translates to: SIQLFRDIGVHT*LFLWWLDWGWR
Trigger: TCTCCAACCCCAGTCCAACCACCAGAGAAAGAGGCAAGTGTGCACCCCGATATCTCTGAAGAGCTGAATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CCA 72 bp TTCATATTTCGCTCACTCTGCTGCTCGATCTGGCCCTaGATGTCCGTGAGGGTACTCTGGAAATGGCTTGTG +
Preference number: 6 (lower is better)
Translates to: FIFRSLCCSIWP*MSVRVLWKWLV
Trigger: CACAAGCCATTTCCAGAGTACCCTCACGGACATCCAGGGCCAGATCGAGCAGCAGAGTGAGCGAAATATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp GCCTCTTCAGTTGTTTCCTCACAGTCCCCATCCTCGTaGTCAGGTGATTCTGCATTCTCAGGCTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: ASSVVSSQSPSS*SGDSAFSGCSL
Trigger: CAGTGAGCAGCCTGAGAATGCAGAATCACCTGACAACGAGGATGGGGACTGTGAGGAAACAACTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 90 bp AGAGTCTTGTTGTGTCTCTGCAGCTCCCGGCACAGACTCTCCAATTaGCTTCGAGCGAGGATAGCTCTGCTGTGTTCACCTTGTAACTGG +
Preference number: 6 (lower is better)
Translates to: RVLLCLCSSRHRLSN*LRARIALLCSPCNW
Trigger: CCAGTTACAAGGTGAACACAGCAGAGCTATCCTCGCTCGAAGCAAATTGGAGAGTCTGTGCCGGGAGCTGCAGAGACACAACAAGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 72 bp GGTGTTGACTGTCGTTCCGCTGAGAGCTGTTCAGAGTaGTTAGCCTCCATCTTGGGAGTAGTATCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: GVDCRSAESCSE*LASILGVVSEG
Trigger: GCCTTCTGATACTACTCCCAAGATGGAGGCTAATCACTCTGAACAGCTCTCAGCGGAACGACAGTCAACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 72 bp TGCAGGACTGTCTCTTGCTCCTTCAGCACTTTCGCCTaGAGTTTCCACTCTGCTGCCTGGTTCAGCAAATAT +
Preference number: 6 (lower is better)
Translates to: CRTVSCSFSTFA*SFHSAAWFSKY
Trigger: ATATTTGCTGAACCAGGCAGCAGAGTGGAAACTTCAGGCGAAAGTGCTGAAGGAGCAAGAGACAGTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358430.8
ENST00000367652.4
CDS TCA 72 bp CTCCTCTGCGTCAATCTCTTGATCCACAGAGACGTTTaGCTCTGGCTCTTCATCGGAGTTGTGCTGACTTTG +
Preference number: 6 (lower is better)
Translates to: LLCVNLLIHRDV*LWLFIGVVLTL
Trigger: CAAAGTCAGCACAACTCCGATGAAGAGCCAGAGTCAAACGTCTCTGTGGATCAAGAGATTGACGCAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 72 bp ACTGGTGCGGGGTTGACTCTGGATGATGAATTATCATaGAGGCTGTGGCCAGATTTTTCACGGCGGTTTGGA +
Preference number: 6 (lower is better)
Translates to: TGAGLTLDDELS*RLWPDFSRRFG
Trigger: TCCAAACCGCCGTGAAAAATCTGGCCACAGCCTTCATGATAATTCATCATCCAGAGTCAACCCCGCACCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp GCTTGTGATTTCCTTCCTTTTCTCTTCTTCCTCACGTaGCCGCTGAAGCGCCTCTTCCTTCAGAGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: ACDFLPFLFFLT*PLKRLFLQSLV
Trigger: AACAAGACTCTGAAGGAAGAGGCGCTTCAGCGGGCACGTGAGGAAGAAGAGAAAAGGAAGGAAATCACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp TGTGACTGGGTAATGATGAACTGTCACCTGGAGGTGTaGACTGTCGTTCCGCTGAGAGCTGTTCAGAGTGAT +
Preference number: 6 (lower is better)
Translates to: CDWVMMNCHLEV*TVVPLRAVQSD
Trigger: ATCACTCTGAACAGCTCTCAGCGGAACGACAGTCAACACCTCCAGGTGACAGTTCATCATTACCCAGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp CCTCCTCTGCGTCAATCTCTTGATCCACAGAGACGTTaGACTCTGGCTCTTCATCGGAGTTGTGCTGACTTT +
Preference number: 6 (lower is better)
Translates to: PPLRQSLDPQRR*TLALHRSCADF
Trigger: AAAGTCAGCACAACTCCGATGAAGAGCCAGAGTCAAACGTCTCTGTGGATCAAGAGATTGACGCAGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS TCA 72 bp TATTTCGGGTTGGGTTTCTTTGGACTGGTGCGGGGTTaGCTCTGGATGATGAATTATCATGAAGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: YFGLGFFGLVRG*LWMMNYHEGCG
Trigger: GCCACAGCCTTCATGATAATTCATCATCCAGAGTCAACCCCGCACCAGTCCAAAGAAACCCAACCCGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp TTTTCCAATTTTTGCTCCTTATTGCTGACGGGCTCTTaGACAGTGGGTGGCTCTCCAGAAGCAACGGGTTCT +
Preference number: 6 (lower is better)
Translates to: FSNFCSLLLTGS*TVGGSPEATGS
Trigger: AGAACCCGTTGCTTCTGGAGAGCCACCCACTGTCAAAGAGCCCGTCAGCAATAAGGAGCAAAAATTGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS CAA 72 bp TCTGCTGCCTGGTTCAGCAAATATTCCTTTTCTCGTTaGTGTCGCTCCTCCGCTTCCTTCATCATTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SAAWFSKYSFSR*CRSSASFIISW
Trigger: CCAAGAAATGATGAAGGAAGCGGAGGAGCGACACAAACGAGAAAAGGAATATTTGCTGAACCAGGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358430.8
ENST00000367652.4
CDS GCA 72 bp TTGCTCCTTCAGCACTTTCGCCTGAAGTTTCCACTCTaGTGCCTGGTTCAGCAAATATTCCTTTTCTCGTTT +
Preference number: 6 (lower is better)
Translates to: LLLQHFRLKFPL*CLVQQIFLFSF
Trigger: AAACGAGAAAAGGAATATTTGCTGAACCAGGCAGCAGAGTGGAAACTTCAGGCGAAAGTGCTGAAGGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358430.8
ENST00000367652.4
CDS CAA 90 bp ATGATGAATTATCATGAAGGCTGTGGCCAGATTTTTCACGGCGGTTaGGACACTATTAACCTCCTCTGCGTCAATCTCTTGATCCACAGA +
Preference number: 6 (lower is better)
Translates to: MMNYHEGCGQIFHGG*DTINLLCVNLLIHR
Trigger: TCTGTGGATCAAGAGATTGACGCAGAGGAGGTTAATAGTGTCCAAACCGCCGTGAAAAATCTGGCCACAGCCTTCATGATAATTCATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358430.8
CDS GCA 72 bp AACTTTTCTTCCGGTGTTTGCAACTTGTTCAGATTTTaGATTAGCAGGTTGGCTTCTTTGCCTAATCCTTTT +
Preference number: 6 (lower is better)
Translates to: NFSSGVCNLFRF*ISRLASLPNPF
Trigger: AAAAGGATTAGGCAAAGAAGCCAACCTGCTAATGCAAAATCTGAACAAGTTGCAAACACCGGAAGAAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358430.8