RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TXLNA (Homo sapiens)

Ensembl gene IDs: ENSG00000084652

Ensembl transcript IDs: ENST00000373609.1, ENST00000373610.8

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCTCTGCCTCTTCCCTGCACCTCTCTCGCCTAGCAAACACTCTGTaGGGTTGGCAGCTCTTGTACCAGCTTAGCCTGGCACAGGGGCTG +
Preference number: 1 (lower is better)
Translates to: TSASSLHLSRLANTL*GWQLLYQLSLAQGL
Trigger: CAGCCCCTGTGCCAGGCTAAGCTGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGGGAAGAGGCAGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 90 bp CCCATGAAGCCAAAGAGGCAGCTGGACATGGGACCCAGCAACTGCTaGATGGAGACAGTGCTGATGGGAACTGGTGGTGGCCTCTCAGGA +
Preference number: 1 (lower is better)
Translates to: PMKPKRQLDMGPSNC*METVLMGTGGGLSG
Trigger: TCCTGAGAGGCCACCACCAGTTCCCATCAGCACTGTCTCCATGCAGCAGTTGCTGGGTCCCATGTCCAGCTGCCTCTTTGGCTTCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp TCACCAAACAGGAAACCTCAGCATCAAGATGGCAAAGGAGCCAAGTaGGGTGGTGAAGGAGGTGGGACACTGGAGGCCAGGCACCCAGGC +
Preference number: 1 (lower is better)
Translates to: SPNRKPQHQDGKGAK*GGEGGGTLEARHPG
Trigger: GCCTGGGTGCCTGGCCTCCAGTGTCCCACCTCCTTCACCACCCCACTTGGCTCCTTTGCCATCTTGATGCTGAGGTTTCCTGTTTGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 90 bp ACTGTAGGCCTTTCCCCTCTCTTCAAGGGGGAAGGTGCATACCTCTaGCTCTTCCCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: TVGLSPLFKGEGAYL*LFPAPLSPSKHSVR
Trigger: CCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGGGAAGAGGCAGAGGTATGCACCTTCCCCCTTGAAGAGAGGGGAAAGGCCTACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp GCTAGAGAGGCACCTGTGAATGATAAGGCTACTGAGAAGCATCATTaGCCTGGTCCTGGCACTACCAAAGGGCAGGGGAAGCGATGCCCA +
Preference number: 1 (lower is better)
Translates to: AREAPVNDKATEKHH*PGPGTTKGQGKRCP
Trigger: TGGGCATCGCTTCCCCTGCCCTTTGGTAGTGCCAGGACCAGGCCAATGATGCTTCTCAGTAGCCTTATCATTCACAGGTGCCTCTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp CCTTCACTCATGGATAGGCACCTCCCCTGCATCTGGCCCAGGACCTaGGCTACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGT +
Preference number: 1 (lower is better)
Translates to: PSLMDRHLPCIWPRT*ATLESRSRAAVVIG
Trigger: ACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTAGCCCAGGTCCTGGGCCAGATGCAGGGGAGGTGCCTATCCATGAGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp AATCCAAAATTGCAAGTGCCAGATGCCAGCCAGGTCAGAACATCCTaGCTTCAGCAATGGGCTGCTCAGCATGGGAGCCTTTTATGGGCC +
Preference number: 1 (lower is better)
Translates to: NPKLQVPDASQVRTS*LQQWAAQHGSLLWA
Trigger: GGCCCATAAAAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGATGTTCTGACCTGGCTGGCATCTGGCACTTGCAATTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp GGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATaGCAGAGATCTCAACACTCACACAGCTGCTTGAGGGCACCTAGA +
Preference number: 1 (lower is better)
Translates to: GHGKHFTGQQYLSQR*QRSQHSHSCLRAPR
Trigger: TCTAGGTGCCCTCAAGCAGCTGTGTGAGTGTTGAGATCTCTGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 90 bp ATCTCAGCCAGAGATGGCAGAGATCTCAACACTCACACAGCTGCTTaGGGGCACCTAGATGTGAAGGATACACCAGAGAATAGCAGGCAA +
Preference number: 1 (lower is better)
Translates to: ISARDGRDLNTHTAA*GHLDVKDTPENSRQ
Trigger: TTGCCTGCTATTCTCTGGTGTATCCTTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTGTTGAGATCTCTGCCATCTCTGGCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 90 bp CAAATCAGACAGAGAAATGCTCAAGTCACTTCTGCCAACTCACTGTaGTGGCAGCTACAGATGACAGCCCCTCTCAAGACTCTTCAGCTC +
Preference number: 1 (lower is better)
Translates to: QIRQRNAQVTSANSL*WQLQMTAPLKTLQL
Trigger: GAGCTGAAGAGTCTTGAGAGGGGCTGTCATCTGTAGCTGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCATTTCTCTGTCTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 90 bp AGACAAATGCAGTCAAGACCTGGGTGTATTACTTGTCTTGAGCTCTaGAGGGCAGGGAGGGGTCTGAGCCTCAAATCAGACAGAGAAATG +
Preference number: 1 (lower is better)
Translates to: RQMQSRPGCITCLEL*RAGRGLSLKSDREM
Trigger: CATTTCTCTGTCTGATTTGAGGCTCAGACCCCTCCCTGCCCTTCAGAGCTCAAGACAAGTAATACACCCAGGTCTTGACTGCATTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 90 bp AATGAAGAGAAGAAAAAGGTAGGGAACCTCATCTGCAGACTGGCCTaGAGGTCTAGACATGGATGGAGCTGTGAGCAAAGGCTGCACCTT +
Preference number: 1 (lower is better)
Translates to: NEEKKKVGNLICRLA*RSRHGWSCEQRLHL
Trigger: AAGGTGCAGCCTTTGCTCACAGCTCCATCCATGTCTAGACCTTCAGGCCAGTCTGCAGATGAGGTTCCCTACCTTTTTCTTCTCTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 90 bp CATCCTATCCATCTTGGTCTGAGTCATTCTGTTGTCCCAGAAAACTaGTTGGCACAAACACTGGCTAATACCCTGGCAAGTTTGCAACAG +
Preference number: 1 (lower is better)
Translates to: HPIHLGLSHSVVPEN*LAQTLANTLASLQQ
Trigger: CTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAACAGAATGACTCAGACCAAGATGGATAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp AATTTACTATTAGCAGAGCCATGCGCTCTTGAGCTTCACCTGCTGTaGTCCCCTGGAGGAAAAGCTAGCAATCTAAGAAACCAACACAGA +
Preference number: 1 (lower is better)
Translates to: NLLLAEPCALELHLL*SPGGKASNLRNQHR
Trigger: TCTGTGTTGGTTTCTTAGATTGCTAGCTTTTCCTCCAGGGGACCACAGCAGGTGAAGCTCAAGAGCGCATGGCTCTGCTAATAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 90 bp GCAAAGCCATCAGAAGCCCTTTCCTTTCTTTTACCACAAACAACCTaGTCTCACCAAACAGGAAACCTCAGCATCAAGATGGCAAAGGAG +
Preference number: 1 (lower is better)
Translates to: AKPSEALSFLLPQTT*SHQTGNLSIKMAKE
Trigger: CTCCTTTGCCATCTTGATGCTGAGGTTTCCTGTTTGGTGAGATCAGGTTGTTTGTGGTAAAAGAAAGGAAAGGGCTTCTGATGGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 90 bp AAAACAGCAAGAAGCAAAGCCCTAACCATCCTATCCATCTTGGTCTaGGTCATTCTGTTGTCCCAGAAAACTGCTTGGCACAAACACTGG +
Preference number: 1 (lower is better)
Translates to: KTARSKALTILSILV*VILLSQKTAWHKHW
Trigger: CCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAACAGAATGACTCAGACCAAGATGGATAGGATGGTTAGGGCTTTGCTTCTTGCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 90 bp CAGTCAATAGTTCAATTTCATTTCTTACCTGTTAGACAACAGCTATaGGCTCCCACACAGGAAGAAGTAGAATCCCCAAGGACAGGCAGG +
Preference number: 1 (lower is better)
Translates to: QSIVQFHFLPVRQQL*APTQEEVESPRTGR
Trigger: CCTGCCTGTCCTTGGGGATTCTACTTCTTCCTGTGTGGGAGCCCATAGCTGTTGTCTAACAGGTAAGAAATGAAATTGAACTATTGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTGCCCAAGGGGCTCCTaGCCAGCACATCATCCCACG +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLACPRGS*PAHHPT
Trigger: CGTGGGATGATGTGCTGGTCAGGAGCCCCTTGGGCA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCAGCCAAGTGGGGTGGTaGAGGAGGTGGGACACTGGA +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLASQVGW*RRWDTG
Trigger: TCCAGTGTCCCACCTCCTTCACCACCCCACTTGGCT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTGTACCAGCTTAGCCTaGCACAGGGGCTGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLACTSLA*HRGWGR
Trigger: CCTACCCCAGCCCCTGTGCCAGGCTAAGCTGGTACA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCCTACAGAAAGTGCCTaGGCTCAGCCCATGGTCCGA +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLAPTESA*AQPMVR
Trigger: TCGGACCATGGGCTGAGCTCAGGCACTTTCTGTAGG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTCTGATGCAGATCAGTaGTACCTGCCCTGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLASDADQ*YLPWGR
Trigger: CCTGCCCCAGGGCAGGTACCACTGATCTGCATCAGA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGATGGCAGCTACAGATaGCAGCCCCTCTCAAGACTC +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLADGSYR*QPLSRL
Trigger: GAGTCTTGAGAGGGGCTGTCATCTGTAGCTGCCATC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGAGCCATGCGCTCTTaGGCTTCACCTGCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSRAMRS*ASPAVV
Trigger: GACCACAGCAGGTGAAGCTCAAGAGCGCATGGCTCT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCACCCCCATCCCCAATaGAAGCCCACTGTACACTTA +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLAHPHPQ*KPTVHL
Trigger: TAAGTGTACAGTGGGCTTGCATTGGGGATGGGGGTG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCATCTGGCCCAGGACCTaGGCTACTTTGGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLAIWPRT*ATLESR
Trigger: TCTGCTTTCCAAAGTAGCCCAGGTCCTGGGCCAGAT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCATTGCAAGTGCCAGATaGCAGCCAGGTCAGAACATC +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLAIASAR*QPGQNI
Trigger: GATGTTCTGACCTGGCTGGCATCTGGCACTTGCAAT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCATGGGACCCAGCAACTaGTGCATGGAGACAGTGCTG +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSMGPSN*CMETVL
Trigger: CAGCACTGTCTCCATGCAGCAGTTGCTGGGTCCCAT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCAACACTCACACAGCTaGTTGAGGGCACCTAGATGT +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLAQHSHS*LRAPRC
Trigger: ACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTGTTG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGAAGGTGCATACCTCTaGCTCTTCCCTGCACCTCTC +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSEGAYL*LFPAPL
Trigger: GAGAGGTGCAGGGAAGAGGCAGAGGTATGCACCTTC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCACTCACACAGCTGCTTaGGGGCACCTAGATGTGAAG +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSTHTAA*GHLDVK
Trigger: CTTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTCCTGGCTTCAGCAATaGGCTGCTCAGCATGGGAGC +
Preference number: 2 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESWLQQ*AAQHGS
Trigger: GCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTCTGCAGCCATTTTATaGATTTCTGGGGCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: SAQQALALPRGHQAAPLASAAIL*ISGAQS
Trigger: TGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGCAGCTAGGAGGGCCTaGGCTGACCAAGCAAGCCCT +
Preference number: 2 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGAARRA*ADQASP
Trigger: AGGGCTTGCTTGGTCAGCTCAGGCCCTCCTAGCTGC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGGAAATCCCCAGCTCTaGGCGCCCTGCCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPGNPQL*APCQGS
Trigger: AGAGCCCTGGCAGGGCGCTCAGAGCTGGGGATTTCC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGGTCTAGACATGGATaGAGCTGTGAGCAAAGGCTG +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSRSRHG*SCEQRL
Trigger: CAGCCTTTGCTCACAGCTCCATCCATGTCTAGACCT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCACCTCATCTGCAGACTaGCCTGAAGGTCTAGACATG +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSTSSAD*PEGLDM
Trigger: CATGTCTAGACCTTCAGGCCAGTCTGCAGATGAGGT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGCTTCAGCAATGGGCTaGTCAGCATGGGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEASAMG*SAWEPF
Trigger: AAAAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTGCTCAAGTCACTTCTaGCAACTCACTGTGATGGCA +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSCSSHF*QLTVMA
Trigger: TGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGATTGCAAGTGCCAGATaGCAGCCAGGTCAGAACATC +
Preference number: 2 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEIASAR*QPGQNI
Trigger: GATGTTCTGACCTGGCTGGCATCTGGCACTTGCAAT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGGACCTGCAGGACAATaGACTAGCTTCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSGPAGQ*TSFKEK
Trigger: TTTTTCTTTGAAGCTAGTTCATTGTCCTGCAGGTCC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGCACCCAGGCACCACTaGTACAGCATCCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPAPRHH*YSIPLP
Trigger: AGGAAGAGGGATGCTGTAGCAGTGGTGCCTGGGTGC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATCCTGGCTTCAGCAATaGGCTGCTCAGCATGGGAGC +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSWLQQ*AAQHGS
Trigger: GCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGCTGATGGGAACTGGTaGTGGCCTCTCAGGACTGAA +
Preference number: 2 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGADGNW*WPLRTE
Trigger: TTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGCATTTGCAAGGCCTTaGAAAATGCCCTATGTACGT +
Preference number: 2 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEAFARP*KMPYVR
Trigger: ACGTACATAGGGCATTTTGCAAGGCCTTGCAAATGC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGATGGGCTGCTCAGCATaGGAGCCTTTTATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQMGCSA*EPFMGQ
Trigger: CTGGCCCATAAAAGGCTCCCATGCTGAGCAGCCCAT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGAAGCATCATTGGCCTaGTCCTGGCACTACCAAAGG +
Preference number: 2 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGEASLA*SWHYQR
Trigger: CCTTTGGTAGTGCCAGGACCAGGCCAATGATGCTTC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGCTGATGGGAACTGGTaGTGGCCTCTCAGGACTGAA +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPADGNW*WPLRTE
Trigger: TTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTTCATTTGCCATCTCTaGTCTCAGTCACACATGATT +
Preference number: 2 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSFICHL*SQSHMI
Trigger: AATCATGTGTGACTGAGACCAGAGATGGCAAATGAA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGCTTCAGCAATGGGCTaGTCAGCATGGGAGCCTTTT +
Preference number: 2 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAASAMG*SAWEPF
Trigger: AAAAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGAAGCATCATTGGCCTaGTCCTGGCACTACCAAAGG +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPEASLA*SWHYQR
Trigger: CCTTTGGTAGTGCCAGGACCAGGCCAATGATGCTTC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAACTGAGAAGCATCATTaGCCTGGTCCTGGCACTACC +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPTEKHH*PGPGTT
Trigger: GGTAGTGCCAGGACCAGGCCAATGATGCTTCTCAGT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAACCTCAGCATCAAGATaGCAAAGGAGCCAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPTSASR*QRSQVG
Trigger: CCCCACTTGGCTCCTTTGCCATCTTGATGCTGAGGT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATCACAGACAAGCCACTaGCTTCATCTGTACACACCC +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSQTSH*LHLYTP
Trigger: GGGTGTGTACAGATGAAGTCAGTGGCTTGTCTGTGA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTCACAGACAAGCCACTaGCTTCATCTGTACACACCC +
Preference number: 2 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASQTSH*LHLYTP
Trigger: GGGTGTGTACAGATGAAGTCAGTGGCTTGTCTGTGA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTGCTCAAGTCACTTCTaGCAACTCACTGTGATGGCA +
Preference number: 2 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGCSSHF*QLTVMA
Trigger: TGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGGAAATCCCCAGCTCTaGGCGCCCTGCCAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIGNPQL*APCQGS
Trigger: AGAGCCCTGGCAGGGCGCTCAGAGCTGGGGATTTCC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCTTGTCAATCATTTGTaGAGGCTAGAGAGGCACCTG +
Preference number: 2 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEALVNHL*RLERHL
Trigger: CAGGTGCCTCTCTAGCCTGCACAAATGATTGACAAG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGCAGCTAGGAGGGCCTaGGCTGACCAAGCAAGCCCT +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIAARRA*ADQASP
Trigger: AGGGCTTGCTTGGTCAGCTCAGGCCCTCCTAGCTGC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGCATTTGCAAGGCCTTaGAAAATGCCCTATGTACGT +
Preference number: 2 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLAFARP*KMPYVR
Trigger: ACGTACATAGGGCATTTTGCAAGGCCTTGCAAATGC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGGACCCAGCAACTGCTaGATGGAGACAGTGCTGATG +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAGPSNC*METVLM
Trigger: CATCAGCACTGTCTCCATGCAGCAGTTGCTGGGTCC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAGTGCTGATGGGAACTaGTGGTGGCCTCTCAGGACT +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASADGN*WWPLRT
Trigger: AGTCCTGAGAGGCCACCACCAGTTCCCATCAGCACT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGGGCAGGGAGGGGTCTaGGCCTCAAATCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMGQGGV*ASNQTE
Trigger: CTCTGTCTGATTTGAGGCTCAGACCCCTCCCTGCCC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAGCCAAGTGGGGTGGTaGAGGAGGTGGGACACTGGA +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMSQVGW*RRWDTG
Trigger: TCCAGTGTCCCACCTCCTTCACCACCCCACTTGGCT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGGACCTGCAGGACAATaGACTAGCTTCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPGPAGQ*TSFKEK
Trigger: TTTTTCTTTGAAGCTAGTTCATTGTCCTGCAGGTCC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGCAAGGCCTTGCAAAATaGCCTATGTACGTAAAACTG +
Preference number: 2 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQQGLAK*PMYVKL
Trigger: CAGTTTTACGTACATAGGGCATTTTGCAAGGCCTTG...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCACAGGTCAGAACATCCTaGCTTCAGCAATGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAQVRTS*LQQWAA
Trigger: AGCAGCCCATTGCTGAAGCCAGGATGTTCTGACCTG...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATCCCAGAAAACTGCTTaGCACAAACACTGGCTAATA +
Preference number: 2 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSQKTA*HKHWLI
Trigger: TATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGCCACCTGCTCACTGTaGCCTCCTACACCACCACAC +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMATCSL*PPTPPH
Trigger: GTGTGGTGGTGTAGGAGGCCACAGTGAGCAGGTGGC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAGAGGCAGCTGGACATaGGACCCAGCAACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMRGSWT*DPATAA
Trigger: TGCAGCAGTTGCTGGGTCCCATGTCCAGCTGCCTCT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CAA 90 bp CCTATCCATCTTGGTCTGAGTCATTCTGTTGTCCCAGAAAACTGCTaGGCACAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: PIHLGLSHSVVPENC*AQTLANTLASLQQQ
Trigger: CTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAACAGAATGACTCAGACCAAGATGGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGTGGCCTCTCAGGACTaGAACCCACAGGTAAGCTTG +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIVASQD*NPQVSL
Trigger: CAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCAC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGTGGCCTCTCAGGACTaGAACCCACAGGTAAGCTTG +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMVASQD*NPQVSL
Trigger: CAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCAC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGACATGGATGGAGCTGTaGGCAAAGGCTGCACCTTGC +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMTWMEL*AKAAPC
Trigger: GCAAGGTGCAGCCTTTGCTCACAGCTCCATCCATGT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAATCCAAAATTGCAAGTaGCAGATGCCAGCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAIQNCK*QMPARS
Trigger: TGACCTGGCTGGCATCTGGCACTTGCAATTTTGGAT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAGGTATAAATGCATTTaGAAGGCCTTGCAAAATGCC +
Preference number: 2 (lower is better)
Translates to: APDQHIIPRKNILQVPCSRYKCI*KALQNA
Trigger: GGCATTTTGCAAGGCCTTGCAAATGCATTTATACCT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAATGGGCTGCTCAGCATaGGAGCCTTTTATGGGCCAG +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIMGCSA*EPFMGQ
Trigger: CTGGCCCATAAAAGGCTCCCATGCTGAGCAGCCCAT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGATGGGAACTGGTGGTaGCCTCTCAGGACTGAAACC +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIDGNWW*PLRTET
Trigger: GGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAGCCAAAGAGGCAGCTaGACATGGGACCCAGCAACT +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMSQRGS*TWDPAT
Trigger: AGTTGCTGGGTCCCATGTCCAGCTGCCTCTTTGGCT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGTTAGACAACAGCTATaGGCTCCCACACAGGAAGAA +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAVRQQL*APTQEE
Trigger: TTCTTCCTGTGTGGGAGCCCATAGCTGTTGTCTAAC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGGGAAAAGGCCCTACTaGAGCAGGAAGAGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMGKRPY*SRKRQG
Trigger: TCCTTGCCTCTTCCTGCTCCAGTAGGGCCTTTTCCC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGCACCCCCATCCCCAATaGAAGCCCACTGTACACTTA +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMHPHPQ*KPTVHL
Trigger: TAAGTGTACAGTGGGCTTGCATTGGGGATGGGGGTG...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGCACCCAGGCACCACTaGTACAGCATCCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSAPRHH*YSIPLP
Trigger: AGGAAGAGGGATGCTGTAGCAGTGGTGCCTGGGTGC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAATACCCTGGCAAGTTTaGAACAGCAGAACATTCAGC +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAIPWQV*NSRTFS
Trigger: GCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTAT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAGCATCCCTCTTCCTTaGAAGGTCCTCAATACAAAC +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASIPLP*KVLNTN
Trigger: GTTTGTATTGAGGACCTTCCAAGGAAGAGGGATGCT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAACCTCAGCATCAAGATaGCAAAGGAGCCAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHITSASR*QRSQVG
Trigger: CCCCACTTGGCTCCTTTGCCATCTTGATGCTGAGGT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGATGGCAGCTACAGATaGCAGCCCCTCTCAAGACTC +
Preference number: 2 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSDGSYR*QPLSRL
Trigger: GAGTCTTGAGAGGGGCTGTCATCTGTAGCTGCCATC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCTGCCAACTCACTGTaGTGGCAGCTACAGATGACA +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHISANSL*WQLQMT
Trigger: TGTCATCTGTAGCTGCCATCACAGTGAGTTGGCAGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCCACAGGTAAGCTTGTaGCAAAGCCATCAGAAGCCC +
Preference number: 2 (lower is better)
Translates to: SAAILWISGAQSIVQFHFPQVSL*QSHQKP
Trigger: GGGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCACCATCCTATCCATCTTaGTCTGAGTCATTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAPSYPS*SESFCC
Trigger: ACAACAGAATGACTCAGACCAAGATGGATAGGATGG...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGCTATCCATCTTGGTCTaGGTCATTCTGTTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMLSILV*VILLSQ
Trigger: CTGGGACAACAGAATGACTCAGACCAAGATGGATAG...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAGGTATAAATGCATTTaGAAGGCCTTGCAAAATGCC +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMARYKCI*KALQNA
Trigger: GGCATTTTGCAAGGCCTTGCAAATGCATTTATACCT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGTTGTCCCAGAAAACTaGTTGGCACAAACACTGGCT +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMVVPEN*LAQTLA
Trigger: AGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAAC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCTGCAGCCATTTTATaGATTTCTGGGGCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHISAAIL*ISGAQS
Trigger: TGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGCTTGGCACAAACACTaGCTAATACCCTGGCAAGTT +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMAWHKH*LIPWQV
Trigger: AACTTGCCAGGGTATTAGCCAGTGTTTGTGCCAAGC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACACAAAATCCAAAATTaGAAGTGCCAGATGCCAGCC +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIHKIQN*KCQMPA
Trigger: GGCTGGCATCTGGCACTTGCAATTTTGGATTTTGTG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGCACAAAATCCAAAATTaGAAGTGCCAGATGCCAGCC +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMHKIQN*KCQMPA
Trigger: GGCTGGCATCTGGCACTTGCAATTTTGGATTTTGTG...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCAGAAATAATCCTTTaGGTGATCTCTTGTCAATCA +
Preference number: 2 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASEIIL*VISCQS
Trigger: TGATTGACAAGAGATCACCCAAAGGATTATTTCTGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAATAGTAGTTATGTACTaGAGTGGGGGTAGAACAGGA +
Preference number: 2 (lower is better)
Translates to: QTLANTLASLQQQNIQHIIVVMY*SGGRTG
Trigger: TCCTGTTCTACCCCCACTCCAGTACATAACTACTAT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR TCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCTTACCACAAACAACCTaGTCTCACCAAACAGGAAAC +
Preference number: 2 (lower is better)
Translates to: SAAILWISGAQSIVQFHFLPQTT*SHQTGN
Trigger: GTTTCCTGTTTGGTGAGATCAGGTTGTTTGTGGTAA...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCAAGGCCTTGCAAAATaGCCTATGTACGTAAAACTG +
Preference number: 2 (lower is better)
Translates to: SAAILWISGAQSIVQFHFQGLAK*PMYVKL
Trigger: CAGTTTTACGTACATAGGGCATTTTGCAAGGCCTTG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAATCAGACAGAGAAATaGTCAAGTCACTTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMNQTEK*SSHFCQ
Trigger: TTGGCAGAAGTGACTTGAGCATTTCTCTGTCTGATT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCAATCAGACAGAGAAATaGTCAAGTCACTTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: SAAILWISGAQSIVQFHFNQTEK*SSHFCQ
Trigger: TTGGCAGAAGTGACTTGAGCATTTCTCTGTCTGATT...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCATTTTATGGATTTCTaGGGCCCAGTCAATAGTTCA +
Preference number: 2 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSHFMDF*GPVNSS
Trigger: TGAACTATTGACTGGGCCCCAGAAATCCATAAAATG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGATTCAGCATATAGAATaGCTCTACACAGTACATAGT +
Preference number: 2 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMIQHIE*LYTVHS
Trigger: ACTATGTACTGTGTAGAGCCATTCTATATGCTGAAT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTCAGAAATAATCCTTTaGGTGATCTCTTGTCAATCA +
Preference number: 2 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSEIIL*VISCQS
Trigger: TGATTGACAAGAGATCACCCAAAGGATTATTTCTGA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTGGTGTGCCATTCATTaGCCATCTCTGGTCTCAGTC +
Preference number: 3 (lower is better)
Translates to: SAQQALALPRGHQAAPLAWCAIH*PSLVSV
Trigger: GACTGAGACCAGAGATGGCAAATGAATGGCACACCA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 72 bp CAGCCAGGTCAGAACATCCTGGCTTCAGCAATGGGCTaGTCAGCATGGGAGCCTTTTATGGGCCAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: QPGQNILASAMG*SAWEPFMGQAW
Trigger: CCAGGCCTGGCCCATAAAAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGATGTTCTGACCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCCTTTGGGTGATCTCTaGTCAATCATTTGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSPLGDL*SIICAG
Trigger: GCCTGCACAAATGATTGACAAGAGATCACCCAAAGG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 72 bp AGACACTGGCCTTCACTCATGGATAGGCACCTCCCCTaGATCTGGCCCAGGACCTGGGCTACTTTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: RHWPSLMDRHLP*IWPRTWATLES
Trigger: GCTTTCCAAAGTAGCCCAGGTCCTGGGCCAGATGCAGGGGAGGTGCCTATCCATGAGTGAAGGCCAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp GATGCCAGCCAGGTCAGAACATCCTGGCTTCAGCAATaGGCTGCTCAGCATGGGAGCCTTTTATGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: DASQVRTSWLQQ*AAQHGSLLWAR
Trigger: CCTGGCCCATAAAAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGATGTTCTGACCTGGCTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 72 bp CTTTCCCCTCTCTTCAAGGGGGAAGGTGCATACCTCTaGCTCTTCCCTGCACCTCTCTCGCCTAGCAAACAC +
Preference number: 3 (lower is better)
Translates to: LSPLFKGEGAYL*LFPAPLSPSKH
Trigger: GTGTTTGCTAGGCGAGAGAGGTGCAGGGAAGAGGCAGAGGTATGCACCTTCCCCCTTGAAGAGAGGGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp TTGCAAGTGCCAGATGCCAGCCAGGTCAGAACATCCTaGCTTCAGCAATGGGCTGCTCAGCATGGGAGCCTT +
Preference number: 3 (lower is better)
Translates to: LQVPDASQVRTS*LQQWAAQHGSL
Trigger: AAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGATGTTCTGACCTGGCTGGCATCTGGCACTTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 72 bp TCTTCCCTGCACCTCTCTCGCCTAGCAAACACTCTGTaGGGTTGGCAGCTCTTGTACCAGCTTAGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: SSLHLSRLANTL*GWQLLYQLSLA
Trigger: TGCCAGGCTAAGCTGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGGTGTATTACTTGTCTaGAGCTCTGAAGGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGGVLLV*SSEGQG
Trigger: TCCCTGCCCTTCAGAGCTCAAGACAAGTAATACACC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp GCACCTGTGAATGATAAGGCTACTGAGAAGCATCATTaGCCTGGTCCTGGCACTACCAAAGGGCAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: APVNDKATEKHH*PGPGTTKGQGK
Trigger: CTTCCCCTGCCCTTTGGTAGTGCCAGGACCAGGCCAATGATGCTTCTCAGTAGCCTTATCATTCACAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTCTCTTGTCAATCATTaGTGCAGGCTAGAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASLVNH*CRLERH
Trigger: GTGCCTCTCTAGCCTGCACAAATGATTGACAAGAGA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTCCTTTGGGTGATCTCTaGTCAATCATTTGTGCAGGC +
Preference number: 3 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLPLGDL*SIICAG
Trigger: GCCTGCACAAATGATTGACAAGAGATCACCCAAAGG...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCCCACAAAATCCAAAATaGCAAGTGCCAGATGCCAGC +
Preference number: 3 (lower is better)
Translates to: APDQHIIPRKNILQVPCSPQNPK*QVPDAS
Trigger: GCTGGCATCTGGCACTTGCAATTTTGGATTTTGTGG...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 72 bp AGCCAGAGATGGCAGAGATCTCAACACTCACACAGCTaGTTGAGGGCACCTAGATGTGAAGGATACACCAGA +
Preference number: 3 (lower is better)
Translates to: SQRWQRSQHSHS*LRAPRCEGYTR
Trigger: TCTGGTGTATCCTTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTGTTGAGATCTCTGCCATCTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp GCACCCAGGCACCACTGCTACAGCATCCCTCTTCCTTaGAAGGTCCTCAATACAAACACTGTCATGTGCAAA +
Preference number: 3 (lower is better)
Translates to: APRHHCYSIPLP*KVLNTNTVMCK
Trigger: TTTGCACATGACAGTGTTTGTATTGAGGACCTTCCAAGGAAGAGGGATGCTGTAGCAGTGGTGCCTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp TTAGCAGAGCCATGCGCTCTTGAGCTTCACCTGCTGTaGTCCCCTGGAGGAAAAGCTAGCAATCTAAGAAAC +
Preference number: 3 (lower is better)
Translates to: LAEPCALELHLL*SPGGKASNLRN
Trigger: GTTTCTTAGATTGCTAGCTTTTCCTCCAGGGGACCACAGCAGGTGAAGCTCAAGAGCGCATGGCTCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR TCA 72 bp CAGAGAAATGCTCAAGTCACTTCTGCCAACTCACTGTaGTGGCAGCTACAGATGACAGCCCCTCTCAAGACT +
Preference number: 3 (lower is better)
Translates to: QRNAQVTSANSL*WQLQMTAPLKT
Trigger: AGTCTTGAGAGGGGCTGTCATCTGTAGCTGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCATTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp AAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATaGCAGAGATCTCAACACTCACACAGCTGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: KHFTGQQYLSQR*QRSQHSHSCLR
Trigger: CCTCAAGCAGCTGTGTGAGTGTTGAGATCTCTGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAACCCACAGGTAAGCTaGTGGCAAAGCCATCAGAAG +
Preference number: 3 (lower is better)
Translates to: KRSWETLHRTAVSQPEMANPQVS*WQSHQK
Trigger: CTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 72 bp GCCTCAAATCAGACAGAGAAATGCTCAAGTCACTTCTaGCAACTCACTGTGATGGCAGCTACAGATGACAGC +
Preference number: 3 (lower is better)
Translates to: ASNQTEKCSSHF*QLTVMAATDDS
Trigger: GCTGTCATCTGTAGCTGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCATTTCTCTGTCTGATTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGAATCAGGACAAATCTaGAGGATTGCACATGTGGGG +
Preference number: 3 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAESGQI*RIAHVG
Trigger: CCCCACATGTGCAATCCTCAAGATTTGTCCTGATTC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGGTGTATTACTTGTCTaGAGCTCTGAAGGGCAGGGA +
Preference number: 3 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMGVLLV*SSEGQG
Trigger: TCCCTGCCCTTCAGAGCTCAAGACAAGTAATACACC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCATTCTCCAGGTCCCTaGTTCCAGGCAGGAAATCCC +
Preference number: 3 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSHSPGP*FQAGNP
Trigger: GGGATTTCCTGCCTGGAACAAGGGACCTGGAGAATG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR GCA 72 bp CCCAATGCAAGCCCACTGTACACTTACAGGTATAAATaGATTTGCAAGGCCTTGCAAAATGCCCTATGTACG +
Preference number: 3 (lower is better)
Translates to: PNASPLYTYRYK*ICKALQNALCT
Trigger: CGTACATAGGGCATTTTGCAAGGCCTTGCAAATGCATTTATACCTGTAAGTGTACAGTGGGCTTGCATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp ATTCTGTTGTCCCAGAAAACTGCTTGGCACAAACACTaGCTAATACCCTGGCAAGTTTGCAACAGCAGAACA +
Preference number: 3 (lower is better)
Translates to: ILLSQKTAWHKH*LIPWQVCNSRT
Trigger: TGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGCCACAAAATCCAAAATaGCAAGTGCCAGATGCCAGC +
Preference number: 3 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMPQNPK*QVPDAS
Trigger: GCTGGCATCTGGCACTTGCAATTTTGGATTTTGTGG...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCTCTTGTCAATCATTaGTGCAGGCTAGAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: QTLANTLASLQQQNIQHISLVNH*CRLERH
Trigger: GTGCCTCTCTAGCCTGCACAAATGATTGACAAGAGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGTCCCAGAAAACTGCTaGGCACAAACACTGGCTAAT +
Preference number: 3 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMVPENC*AQTLAN
Trigger: ATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGAC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR-3UTR CAA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATTCAGAAATAATCCTTaGGGTGATCTCTTGTCAATC +
Preference number: 3 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAFRNNP*GDLLSI
Trigger: GATTGACAAGAGATCACCCAAAGGATTATTTCTGAA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp AACAGGACACAGAAACAACTGTCTGCAGCCATTTTATaGATTTCTGGGGCCCAGTCAATAGTTCAATTTCAT +
Preference number: 3 (lower is better)
Translates to: NRTQKQLSAAIL*ISGAQSIVQFH
Trigger: ATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGACAGTTGTTTCTGTGTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CCA 72 bp AGAAGGAGAAATGGTGTGCCATTCATTTGCCATCTCTaGTCTCAGTCACACATGATTCAGTACTTAACATTC +
Preference number: 3 (lower is better)
Translates to: RRRNGVPFICHL*SQSHMIQYLTF
Trigger: GAATGTTAAGTACTGAATCATGTGTGACTGAGACCAGAGATGGCAAATGAATGGCACACCATTTCTCCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCAGCTCAGCAGGCCTTaGCCCTCCCCCGTGGACACC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAQLSRP*PSPVDT
Trigger: GGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCAGCAAGGCGCTTCTGTaGCCCTGGGGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLASKALL*PWGSWV
Trigger: CACCCAGCTCCCCCAGGGTCACAGAAGCGCCTTGCT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGGAAATCCCCAGCTCTaGGCGCCCTGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAGNPQL*APCQGS
Trigger: AGAGCCCTGGCAGGGCGCTCAGAGCTGGGGATTTCC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGAAACCCCGAGTAACTaGTGCCGGCCAGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAETPSN*CRPAAC
Trigger: GCAGGCGGCTGGCCGGCAGCAGTTACTCGGGGTTTC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCAGGACGGCCTTGCTGTaGTCACCGCGCAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLARTALL*SPRRWS
Trigger: GGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTCCGAGGAGCCTGGCTaGTGCCGGGACCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLASEEPG*CRDLLL
Trigger: AAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAGCCGGCTCACCCTGTaGCCCATCCTCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESRLTL*PILAGA
Trigger: GGCCCCGGCGAGGATGGGGCACAGGGTGAGCCGGCT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCAAGCAGGGCCTTGTTaGTGCTCTCCCACCGGGACC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAQAGPC*CSPTGT
Trigger: GGTCCCGGTGGGAGAGCAGCAACAAGGCCCTGCTTG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGCTGTGAGCAAAGGCTaGACCTTGCCTGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAAVSKG*TLPGAH
Trigger: GTGGGCCCCAGGCAAGGTGCAGCCTTTGCTCACAGC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGGCTGGGGCAGCAGCTaGAGAATCAGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAGWGSS*RISSAG
Trigger: GCCTGCTGAGCTGATTCTCCAGCTGCTGCCCCAGCC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCACCTTCTGCTTCTACTaGAGGAGCCGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLATFCFY*RSRLAG
Trigger: CCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGCAGGGCCTTGTTGCTaGTCTCCCACCGGGACCGGT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSAGPCC*SPTGTG
Trigger: ACCGGTCCCGGTGGGAGAGCAGCAACAAGGCCCTGC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGGCCCTGGCGGAGGTaGGCTCTTGAGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSRPWRR*ALEAQS
Trigger: AGACTGGGCCTCAAGAGCCCACCTCCGCCAGGGCCT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTGGGGCCCACATTCCTaGCCTGGGAAACCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSWGPHS*PGKPSW
Trigger: CCAGCTGGGTTTCCCAGGTCAGGAATGTGGGCCCCA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGCTCAATCAGCTTCTTaGGCCTCTCAGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAAQSAS*ASQPAP
Trigger: TGGAGCTGGCTGAGAGGCTCAAGAAGCTGATTGAGC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGCTCCCTTCCCAGCATaGCCCAACACCAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSAPFPA*PNTRLS
Trigger: AGAGAGCCTGGTGTTGGGTCATGCTGGGAAGGGAGC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGCCAAGTGGGGTGGTaGAGGAGGTGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSSQVGW*RRWDTG
Trigger: TCCAGTGTCCCACCTCCTTCACCACCCCACTTGGCT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGGCCTGATGCTTCTGTaGTCGGTGCTCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSGLMLL*SVLLGS
Trigger: GCTACCCAGGAGCACCGAGCACAGAAGCATCAGGCC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGACCGCCGACGTCCGATaGCTTCCCCACCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLETADVR*LPHLWP
Trigger: AGGCCAGAGGTGGGGAAGCCATCGGACGTCGGCGGT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGGCTTCCGAGGAGCCTaGCTGCTGCCGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEGFRGA*LLPGPS
Trigger: AGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGAAGCC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTGTACCAGCTTAGCCTaGCACAGGGGCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSCTSLA*HRGWGR
Trigger: CCTACCCCAGCCCCTGTGCCAGGCTAAGCTGGTACA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCACTGGCCTTCACTCATaGATAGGCACCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLATGLHS*IGTSPA
Trigger: TGCAGGGGAGGTGCCTATCCATGAGTGAAGGCCAGT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGAGCTTCACCTGCTGTaGTCCCCTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAELHLL*SPGGKA
Trigger: AGCTTTTCCTCCAGGGGACCACAGCAGGTGAAGCTC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCTTCATCTGCTTCTGTaGATTCCGGTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLALHLLL*IPVLLQ
Trigger: CTGGAGGAGCACCGGAATTCACAGAAGCAGATGAAG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCCTACAGAAAGTGCCTaGGCTCAGCCCATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSPTESA*AQPMVR
Trigger: TCGGACCATGGGCTGAGCTCAGGCACTTTCTGTAGG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTCTTGTTCAGGTCATTaGGCTCTGTCTGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLASCSGH*ALSAVP
Trigger: GGGCACTGCAGACAGAGCGCAATGACCTGAACAAGA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCAGATCAGTGGTACCTaGCCTGGGGCAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSQISGT*PGAGEG
Trigger: TCCTTCTCCTGCCCCAGGGCAGGTACCACTGATCTG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAAATCCTTCTCCCGCTaGTGCCGCTCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSKSFSR*CRSSAS
Trigger: GGAGGCAGAAGAGCGGCACCAGCGGGAGAAGGATTT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAGGCTCTCTAGGCCCTaGCGGAGGTGGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLERLSRP*RRWALE
Trigger: CTCAAGAGCCCACCTCCGCCAGGGCCTAGAGAGCCT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCTGGCTTCAGCAATaGGCTGCTCAGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSSWLQQ*AAQHGS
Trigger: GCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGGCTCCCCATTCCTTaGCACATAGGTCCGGGACTT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSRLPIP*HIGPGL
Trigger: AAGTCCCGGACCTATGTGGCAAGGAATGGGGAGCCT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTTGAGGGAGCGGTTGTaGCGCTGCAGCTCACGGCAT +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLELRERL*RCSSRH
Trigger: ATGCCGTGAGCTGCAGCGGCACAACCGCTCCCTCAA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTTCAGGTGGGTCTCTTaGTGCTTCATCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAFRWVS*CFISSH
Trigger: GTGTGAGCTGATGAAGCAGCAAGAGACCCACCTGAA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTATAGGGCAAGCTGTTaGTTCAGGTGGGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAYRASC*FRWVSC
Trigger: GCAAGAGACCCACCTGAAGCAACAGCTTGCCCTATA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTGCTTCTGTGCTCGGTaGTCCTGGGTAGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLECFCAR*SWVARR
Trigger: GCGCCTTGCTACCCAGGAGCACCGAGCACAGAAGCA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTGTGATGAGCGATGCTaGGTCAGGAGAAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLACDERC*VRRRSS
Trigger: TGAGGATCTTCTCCTGACCCAGCATCGCTCATCACA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATGGCTGGGCCGCTCCTaGGCTCCCTCGGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPWLGRS*APSGPA
Trigger: AGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAACTGCAGGAGCCGCCTaGCTGGGCCGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPTAGAA*LGRSWA
Trigger: AGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGATCTCTTCTGTGTTTaGATCCCCCTTGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLADLFCV*IPLGGF
Trigger: GAACCCTCCAAGGGGGATCCAAACACAGAAGAGATC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTCCTGTGGCCTTCGATaGTCTCGGTCTCCGACCTCG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESCGLR*SRSPTS
Trigger: CGAGGTCGGAGACCGAGACCATCGAAGGCCACAGGA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCATGGGCTGCTCAGCATaGGAGCCTTTTATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSMGCSA*EPFMGQ
Trigger: CTGGCCCATAAAAGGCTCCCATGCTGAGCAGCCCAT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGCTGATGGGAACTGGTaGTGGCCTCTCAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSADGNW*WPLRTE
Trigger: TTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCAGTCAGGCAATTATGTaGGCCACTGTAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLASQAIM*ATVGLS
Trigger: GGAAAGGCCTACAGTGGCCCACATAATTGCCTGACT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGCCCACATTCCTGACCTaGGAAACCCAGCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEPTFLT*ETQLGP
Trigger: TGGCCCCAGCTGGGTTTCCCAGGTCAGGAATGTGGG...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLACSICS*MSFSVT
Trigger: GGTGACACTGAATGACATTCAGCTGCAGATGGAACA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCAGGGCCACTGTCAGTaGGGGAGCCCTGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAQGHCQ*GSPGHQ
Trigger: CTGGTGGCCAGGGCTCCCTCACTGACAGTGGCCCTG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGGAAATCCCCAGCTCTaGGCGCCCTGCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGGNPQL*APCQGS
Trigger: AGAGCCCTGGCAGGGCGCTCAGAGCTGGGGATTTCC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCAATAGCAGGCAACTCTaGTGCAGATCAGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLANSRQL*CRSVVP
Trigger: AGGTACCACTGATCTGCATCAGAGTTGCCTGCTATT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGGGCCAGGACGGCCTTaGTGTGCTCACCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLGPGRP*CAHRAG
Trigger: ACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCACCCCCATCCCCAATaGAAGCCCACTGTACACTTA +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSHPHPQ*KPTVHL
Trigger: TAAGTGTACAGTGGGCTTGCATTGGGGATGGGGGTG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGTATGTCTTCCAGTTaGCGGCTCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSSMSSS*RLSSSE
Trigger: CTCTGAGGAGCTGAGCCGCCAACTGGAAGACATACT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTTCTCTTGCACCAGCTaGCTCTGCTTTTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAFSCTS*LCFFCR
Trigger: CCTACAGAAAAAGCAGAGCCAGCTGGTGCAAGAGAA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCTCTTGGCGCAGCTTaGAGTTGCGCTCATTGTGCT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSSLGAA*SCAHCA
Trigger: AGCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGGCCCTGGCGGAGGTaGGCTCTTGAGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGRPWRR*ALEAQS
Trigger: AGACTGGGCCTCAAGAGCCCACCTCCGCCAGGGCCT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCAGGTCAGAACATCCTaGCTTCAGCAATGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSQVRTS*LQQWAA
Trigger: AGCAGCCCATTGCTGAAGCCAGGATGTTCTGACCTG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCACCTCAGCATCAAGATaGCAAAGGAGCCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSTSASR*QRSQVG
Trigger: CCCCACTTGGCTCCTTTGCCATCTTGATGCTGAGGT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGTTAGACAACAGCTATaGGCTCCCACACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAVRQQL*APTQEE
Trigger: TTCTTCCTGTGTGGGAGCCCATAGCTGTTGTCTAAC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGGACCTGGGCTACTTTaGAAAGCAGAAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSGPGLL*KAEAEQ
Trigger: CTGCTCTGCTTCTGCTTTCCAAAGTAGCCCAGGTCC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGGCCCAGTCTGGCCTaGTGCTTCTGTGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGRPSLA*CFCARC
Trigger: GCACCGAGCACAGAAGCATCAGGCCAGACTGGGCCT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGCTAGGTATGGAAGATaGAGGGACCTGCAGGACAAT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSARYGR*RDLQDN
Trigger: ATTGTCCTGCAGGTCCCTTCATCTTCCATACCTAGC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGCTGCCGGGACCTTCTaGTTCTACTGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGAAGTF*FYCRSR
Trigger: GCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGGCTCTCAAGCTTGCTaGGGGCCAGGACGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPGSQAC*GPGRPC
Trigger: GCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGAGCGGTTGTGCCGCTaGAGCTCACGGCATAGGCTC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGERLCR*SSRHRL
Trigger: GAGCCTATGCCGTGAGCTGCAGCGGCACAACCGCTC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTCCTCCCGGGCCCGCTaGACACCTTCTTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSSRAR*TPSSLR
Trigger: CCTCAAGGAAGAAGGTGTGCAGCGGGCCCGGGAGGA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGCTTCAAGGGGGAAGGTaGATACCTCTGCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLELQGGR*IPLPLP
Trigger: GGGAAGAGGCAGAGGTATGCACCTTCCCCCTTGAAG...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTGGCTTCCCCACCTCTaGCCTCGCACCGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLWLPHL*PRTGNP
Trigger: GGGGTTTCCGGTGCGAGGCCAGAGGTGGGGAAGCCA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGGGACCGGTACATGGTaGTTTCTTTCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSGTGTW*FLSPAS
Trigger: AGAAGCTGGAGAAAGAAACCACCATGTACCGGTCCC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGACTGGCCTTCACTCATaGATAGGCACCTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLETGLHS*IGTSPA
Trigger: TGCAGGGGAGGTGCCTATCCATGAGTGAAGGCCAGT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTCTTGGCCCTCCCCCGTaGACACCAGGCAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLLGPPP*TPGSST
Trigger: AGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAG...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTCTGAGTGGCCGGGCTaGGCCATAAGGAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESEWPG*AIRKAV
Trigger: AACTGCTTTCCTTATGGCCCAGCCCGGCCACTCAGA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGTAGGTCCTTGTGTTTaGAGACTTTGTCGATATGCT +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAVGPCV*RLCRYA
Trigger: AGCATATCGACAAAGTCTTCAAACACAAGGACCTAC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGCAGCTAGGAGGGCCTaGGCTGACCAAGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPAARRA*ADQASP
Trigger: AGGGCTTGCTTGGTCAGCTCAGGCCCTCCTAGCTGC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTTACCACAAACAACCTaGTCTCACCAAACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLALPQTT*SHQTGN
Trigger: GTTTCCTGTTTGGTGAGATCAGGTTGTTTGTGGTAA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAAGCTCCCACAGCGGGTaGGGGAAGAGGCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSSHSG*GKRPLL
Trigger: GAGAAGAGGCCTCTTCCCTCACCCGCTGTGGGAGCT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGAGGAGCCTGGCTGCTaGCGGGACCTTCTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGEEPGC*RDLLLL
Trigger: TAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTCCGAGGAGCCTGGCTaGTGCCGGGACCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLSEEPG*CRDLLL
Trigger: AAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTGTAGGAGCTTCATCTaGTTCTGTGAATTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSCRSFI*FCEFRC
Trigger: GCACCGGAATTCACAGAAGCAGATGAAGCTCCTACA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCTTGGATTGGATTGTTTaGCAGCCCCGTTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLALDWIV*QPRSFC
Trigger: ACAAAAAGAACGGGGCTGCCAAACAATCCAATCCAA...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCAGACTGAGCCGTTCTaGCTTGAGCCCCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAQTEPF*LEPPPA
Trigger: AGCCGGAGGGGGCTCAAGCCAGAACGGCTCAGTCTG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTGCTCACCGCGCAGGTaGTCCTTCTCTTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGCSPRR*SFSCTS
Trigger: GCTGGTGCAAGAGAAGGACCACCTGCGCGGTGAGCA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAAGGCTCTCTAGGCCCTaGCGGAGGTGGGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPRLSRP*RRWALE
Trigger: CTCAAGAGCCCACCTCCGCCAGGGCCTAGAGAGCCT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGAAGCATCATTGGCCTaGTCCTGGCACTACCAAAGG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEEASLA*SWHYQR
Trigger: CCTTTGGTAGTGCCAGGACCAGGCCAATGATGCTTC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGCCACCTGCTCACTGTaGCCTCCTACACCACCACAC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGATCSL*PPTPPH
Trigger: GTGTGGTGGTGTAGGAGGCCACAGTGAGCAGGTGGC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACCTGGGAAACCCAGCTaGGGCCACCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPPGKPS*GHLLTV
Trigger: CACAGTGAGCAGGTGGCCCCAGCTGGGTTTCCCAGG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGATCTGGCCCAGGACCTaGGCTACTTTGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEIWPRT*ATLESR
Trigger: TCTGCTTTCCAAAGTAGCCCAGGTCCTGGGCCAGAT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGGCTGGGGCAGCAGCTaGAGAATCAGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPGWGSS*RISSAG
Trigger: GCCTGCTGAGCTGATTCTCCAGCTGCTGCCCCAGCC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAACGGCTCTCTGGTCTTaGCGGGTCAGGAGAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPTALWS*RVRRAR
Trigger: TCGGGCTCTCCTGACCCGCCAAGACCAGAGAGCCGT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGCGCCAACGGCTCTCTaGTCTTGGCGGGTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAAPTAL*SWRVRR
Trigger: TCTCCTGACCCGCCAAGACCAGAGAGCCGTTGGCGC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR TCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGGGCAGGGAGGGGTCTaGGCCTCAAATCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLGQGGV*ASNQTE
Trigger: CTCTGTCTGATTTGAGGCTCAGACCCCTCCCTGCCC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCTGCCCAAGGGGCTCCTaGCCAGCACATCATCCCACG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSCPRGS*PAHHPT
Trigger: CGTGGGATGATGTGCTGGTCAGGAGCCCCTTGGGCA...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATGGGACCCACCCAGGTaGGGAAGACACTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPWDPPR*GRHWPS
Trigger: TGAAGGCCAGTGTCTTCCTCACCTGGGTGGGTCCCA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTGGGACCCACCCAGGTaGGGAAGACACTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAWDPPR*GRHWPS
Trigger: TGAAGGCCAGTGTCTTCCTCACCTGGGTGGGTCCCA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGCTTCAAACAAGTCTaGGTGGCCGGGCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSFKQV*VAGLGH
Trigger: ATGGCCCAGCCCGGCCACTCAGACTTGTTTGAAGCT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGCTGCCGGGACCTTCTaGTTCTACTGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSAAGTF*FYCRSR
Trigger: GCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTGCACCAGCTGGCTCTaGTTTTTCTGTAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLECTSWL*FFCRSF
Trigger: GAAGCTCCTACAGAAAAAGCAGAGCCAGCTGGTGCA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAATAGGCTCTCAAGCTTaGTGCGGGCCAGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPIGSQA*CGPGRP
Trigger: AGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTAT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCATAGGCTCTCAAGCTTaGTGCGGGCCAGGACGGCCT +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAIGSQA*CGPGRP
Trigger: AGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTAT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATTGAGGGAGCGGTTGTaGCGCTGCAGCTCACGGCAT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPLRERL*RCSSRH
Trigger: ATGCCGTGAGCTGCAGCGGCACAACCGCTCCCTCAA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTCGCGCAGCTCATACTaGTCAATCAGCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESRSSY*SISFLS
Trigger: GCTCAAGAAGCTGATTGAGCAGTATGAGCTGCGCGA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCCAAGCAGGGCCTTGTTaGTGCTCTCCCACCGGGACC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSQAGPC*CSPTGT
Trigger: GGTCCCGGTGGGAGAGCAGCAACAAGGCCCTGCTTG...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCGTTGGATTTTTACCTaGAGGCCCTCCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSRWIFT*RPSSSL
Trigger: TAAAGAACTGGAGGGCCTGCAGGTAAAAATCCAACG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCATTTTATGGATTTCTaGGGCCCAGTCAATAGTTCA +
Preference number: 4 (lower is better)
Translates to: SAQQALALPRGHQAAPLAHFMDF*GPVNSS
Trigger: TGAACTATTGACTGGGCCCCAGAAATCCATAAAATG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGCCACCTGCTCACTGTaGCCTCCTACACCACCACAC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAATCSL*PPTPPH
Trigger: GTGTGGTGGTGTAGGAGGCCACAGTGAGCAGGTGGC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCCCACATTCCTGACCTaGGAAACCCAGCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAPTFLT*ETQLGP
Trigger: TGGCCCCAGCTGGGTTTCCCAGGTCAGGAATGTGGG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAGGTCTAGACATGGATaGAGCTGTGAGCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLERSRHG*SCEQRL
Trigger: CAGCCTTTGCTCACAGCTCCATCCATGTCTAGACCT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGCAAGGCGGAAAGGCTaGGGCAGCAGCTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPARRKG*GSSWRI
Trigger: GATTCTCCAGCTGCTGCCCCAGCCTTTCCGCCTTGC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGTTCCTTCTCTCCATTaGCTACTGGAGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEVPSLH*LLELVQ
Trigger: CTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAAC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCAGAGCCATGCGCTCTTaGGCTTCACCTGCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEARAMRS*ASPAVV
Trigger: GACCACAGCAGGTGAAGCTCAAGAGCGCATGGCTCT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGAGCTTCAAACAAGTCTaGGTGGCCGGGCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQSFKQV*VAGLGH
Trigger: ATGGCCCAGCCCGGCCACTCAGACTTGTTTGAAGCT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCACCTTCTGCTTCTACTaGAGGAGCCGCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSTFCFY*RSRLAG
Trigger: CCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGGTCCGGGACTTCTCTaGATCTTCGGGTTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSGPGLL*IFGFSR
Trigger: CCGGCTGAACCCGAAGATGCAGAGAAGTCCCGGACC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAGAGTATTCAATGTCTaGATCAGCAACGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSRVFNV*ISNVIS
Trigger: GGAGATCACGTTGCTGATGCAGACATTGAATACTCT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGGCGCAGCTTGGAGTTaGGCTCATTGTGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGGAAWS*AHCAVP
Trigger: TGGAACAGCACAATGAGCGCAACTCCAAGCTGCGCC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTCATTGCGCTCTGTCTaGAGTGCCCGGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASLRSV*SARHSF
Trigger: GAAGCTGTGCCGGGCACTGCAGACAGAGCGCAATGA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTGCTCAAGTCACTTCTaGCAACTCACTGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLECSSHF*QLTVMA
Trigger: TGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGCTTGTCAATCATTTGTaGAGGCTAGAGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLELVNHL*RLERHL
Trigger: CAGGTGCCTCTCTAGCCTGCACAAATGATTGACAAG...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGCACCCAGGCACCACTaGTACAGCATCCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLAPRHH*YSIPLP
Trigger: AGGAAGAGGGATGCTGTAGCAGTGGTGCCTGGGTGC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGGACCCAGCAACTGCTaGATGGAGACAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGGPSNC*METVLM
Trigger: CATCAGCACTGTCTCCATGCAGCAGTTGCTGGGTCC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGAAGGTGCATACCTCTaGCTCTTCCCTGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGEGAYL*LFPAPL
Trigger: GAGAGGTGCAGGGAAGAGGCAGAGGTATGCACCTTC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGCAAAGGCTGCACCTTaGCTGGGGCCCACATTCCTG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSAKAAP*LGPTFL
Trigger: CAGGAATGTGGGCCCCAGGCAAGGTGCAGCCTTTGC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTCCTTTAGCATCTCCTaGGCCTGCTGGAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSFSIS*ACWSLA
Trigger: TGCCAAGCTCCAGCAGGCCCAGGAGATGCTAAAGGA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCATACCTCGCTGCTTTTaGAAAGTGTGTTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSIPRCF*KVCSGT
Trigger: AGTTCCAGAACACACTTTCCAAAAGCAGCGAGGTAT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATGTGCTCGGTGCTCCTaGGTAGCAAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPCARCS*VARRFC
Trigger: ACAGAAGCGCCTTGCTACCCAGGAGCACCGAGCACA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGTGCTGATGGGAACTaGTGGTGGCCTCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSADGN*WWPLRT
Trigger: AGTCCTGAGAGGCCACCACCAGTTCCCATCAGCACT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTCTGCAGCCATTTTATaGATTTCTGGGGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESAAIL*ISGAQS
Trigger: TGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTCTGATGCAGATCAGTaGTACCTGCCCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASDADQ*YLPWGR
Trigger: CCTGCCCCAGGGCAGGTACCACTGATCTGCATCAGA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGGGAAAAGGCCCTACTaGAGCAGGAAGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGGKRPY*SRKRQG
Trigger: TCCTTGCCTCTTCCTGCTCCAGTAGGGCCTTTTCCC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCCTACACCACCACACTaGGATCCAGCAGCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAPTPPH*DPAAPV
Trigger: GACTGGAGCTGCTGGATCCCAGTGTGGTGGTGTAGG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTCTGAGTGGCCGGGCTaGGCCATAAGGAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSEWPG*AIRKAV
Trigger: AACTGCTTTCCTTATGGCCCAGCCCGGCCACTCAGA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTGTGATGAGCGATGCTaGGTCAGGAGAAGATCCTTT +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLECDERC*VRRRSF
Trigger: AAAGGATCTTCTCCTGACCCAGCATCGCTCATCACA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGCTCAATCAGCTTCTTaGGCCTCTCAGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPAQSAS*ASQPAP
Trigger: TGGAGCTGGCTGAGAGGCTCAAGAAGCTGATTGAGC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGATGGCAGCTACAGATaGCAGCCCCTCTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEADGSYR*QPLSRL
Trigger: GAGTCTTGAGAGGGGCTGTCATCTGTAGCTGCCATC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGTGGCCTCTCAGGACTaGAACCCACAGGTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAVASQD*NPQVSL
Trigger: CAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCAC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTACATGGATGGAGCTGTaGGCAAAGGCTGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLTWMEL*AKAAPC
Trigger: GCAAGGTGCAGCCTTTGCTCACAGCTCCATCCATGT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCCCTACAGAAAGTGCCTaGGCTCAGCCCATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSPTESA*AQPMVR
Trigger: TCGGACCATGGGCTGAGCTCAGGCACTTTCTGTAGG...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGGCGCAGCTTGGAGTTaGGCTCATTGTGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLGAAWS*AHCAVP
Trigger: TGGAACAGCACAATGAGCGCAACTCCAAGCTGCGCC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTATGGGACCCAGCAACTaGTGCATGGAGACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLMGPSN*CMETVL
Trigger: CAGCACTGTCTCCATGCAGCAGTTGCTGGGTCCCAT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCCAGATCAGTGGTACCTaGCCTGGGGCAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSQISGT*PGAGEG
Trigger: TCCTTCTCCTGCCCCAGGGCAGGTACCACTGATCTG...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACTTCAAGGGGGAAGGTaGATACCTCTGCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPLQGGR*IPLPLP
Trigger: GGGAAGAGGCAGAGGTATGCACCTTCCCCCTTGAAG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACTCTTGAGCTTCACCTaGTGTGGTCCCCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPLLSFT*CGPLEE
Trigger: TTCCTCCAGGGGACCACAGCAGGTGAAGCTCAAGAG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGTATGTCTTCCAGTTaGCGGCTCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSMSSS*RLSSSE
Trigger: CTCTGAGGAGCTGAGCCGCCAACTGGAAGACATACT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGACCTCAGCATCAAGATaGCAAAGGAGCCAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGTSASR*QRSQVG
Trigger: CCCCACTTGGCTCCTTTGCCATCTTGATGCTGAGGT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGATGGGAACTGGTGGTaGCCTCTCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEADGNWW*PLRTET
Trigger: GGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAAGCCAAAGAGGCAGCTaGACATGGGACCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSQRGS*TWDPAT
Trigger: AGTTGCTGGGTCCCATGTCCAGCTGCCTCTTTGGCT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTAGCCAAAGAGGCAGCTaGACATGGGACCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLSQRGS*TWDPAT
Trigger: AGTTGCTGGGTCCCATGTCCAGCTGCCTCTTTGGCT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGGGAAAAGGCCCTACTaGAGCAGGAAGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLGKRPY*SRKRQG
Trigger: TCCTTGCCTCTTCCTGCTCCAGTAGGGCCTTTTCCC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CAA 72 bp GCAGGGAGGTGCCAGGAAATAGAATCAGGACAAATCTaGAGGATTGCACATGTGGGGGTGGGGGCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGRCQEIESGQI*RIAHVGVGAGS
Trigger: GCTTCCTGCCCCCACCCCCACATGTGCAATCCTCAAGATTTGTCCTGATTCTATTTCCTGGCACCTCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGTGGCCTCTCAGGACTaGAACCCACAGGTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSVASQD*NPQVSL
Trigger: CAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCAC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCACTCACACAGCTGCTTaGGGGCACCTAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEATHTAA*GHLDVK
Trigger: CTTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATGGGGCCCACATTCCTaGCCTGGGAAACCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAWGPHS*PGKPSW
Trigger: CCAGCTGGGTTTCCCAGGTCAGGAATGTGGGCCCCA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCAGCCGGCTCACCCTGTaGCCCATCCTCGCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFSRLTL*PILAGA
Trigger: GGCCCCGGCGAGGATGGGGCACAGGGTGAGCCGGCT...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACCGACCTCGTCACTCTaGCGGATCTCTTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPPTSSL*RISSVF
Trigger: AAACACAGAAGAGATCCGGCAGAGTGACGAGGTCGG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTCGCGCAGCTCATACTaGTCAATCAGCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSRSSY*SISFLS
Trigger: GCTCAAGAAGCTGATTGAGCAGTATGAGCTGCGCGA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGCAAGGCCTTGCAAAATaGCCTATGTACGTAAAACTG +
Preference number: 4 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEQGLAK*PMYVKL
Trigger: CAGTTTTACGTACATAGGGCATTTTGCAAGGCCTTG...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCATGGGACCCAGCAACTaGTGCATGGAGACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSMGPSN*CMETVL
Trigger: CAGCACTGTCTCCATGCAGCAGTTGCTGGGTCCCAT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGAAGGTGCATACCTCTaGCTCTTCCCTGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSEGAYL*LFPAPL
Trigger: GAGAGGTGCAGGGAAGAGGCAGAGGTATGCACCTTC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGTCTCCTACAGAAAGTaGCTGAGCTCAGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAVSYRK*LSSAHG
Trigger: ACCATGGGCTGAGCTCAGGCACTTTCTGTAGGAGAC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTCTCCTACAGAAAGTaGCTGAGCTCAGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLVSYRK*LSSAHG
Trigger: ACCATGGGCTGAGCTCAGGCACTTTCTGTAGGAGAC...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAACTGCAGGAGCCGCCTaGCTGGGCCGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHITAGAA*LGRSWA
Trigger: AGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGTCTCTTGGCGCAGCTTaGAGTTGCGCTCATTGTGCT +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQSLGAA*SCAHCA
Trigger: AGCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGA...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGACCGGGACCGGTACATaGTGGTTTCTTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQTGTGT*WFLSPA
Trigger: AGCTGGAGAAAGAAACCACCATGTACCGGTCCCGGT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCAGCTTCTCCAGCCGTTaGATTTTTACCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASFSSR*IFTCRP
Trigger: GGGCCTGCAGGTAAAAATCCAACGGCTGGAGAAGCT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCATGGGCTGCTCAGCATaGGAGCCTTTTATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSMGCSA*EPFMGQ
Trigger: CTGGCCCATAAAAGGCTCCCATGCTGAGCAGCCCAT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCACTGAGAAGCATCATTaGCCTGGTCCTGGCACTACC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEATEKHH*PGPGTT
Trigger: GGTAGTGCCAGGACCAGGCCAATGATGCTTCTCAGT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCCACAGGTAAGCTTGTaGCAAAGCCATCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAPQVSL*QSHQKP
Trigger: GGGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGTGCCTGGCTGTCCCTaGGGTGACCACCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAVPGCP*GDHLCA
Trigger: AGCACAGAGGTGGTCACCCCAGGGACAGCCAGGCAC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGCTATCCATCTTGGTCTaGGTCATTCTGTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGLSILV*VILLSQ
Trigger: CTGGGACAACAGAATGACTCAGACCAAGATGGATAG...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGACCCCGAGTAACTGCTaGCGGCCAGCCGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMTPSNC*RPAACS
Trigger: GGAGCAGGCGGCTGGCCGGCAGCAGTTACTCGGGGT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACATTGTGATGAGCGATaGTGGGTCAGGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPHCDER*WVRRRS
Trigger: GGATCTTCTCCTGACCCAGCATCGCTCATCACAATG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGGTTCAGCATACTTCTTaGACAGAGCAGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGVQHTS*TEQPAS
Trigger: AGAAGCTGGCTGCTCTGTGCAAGAAGTATGCTGAAC...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTTCTGTGAATTCCGGTaGTCCTCCAGCAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAFCEFR*SSSSSA
Trigger: TGCTGAACTGCTGGAGGAGCACCGGAATTCACAGAA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTGCACCAGCTGGCTCTaGTTTTTCTGTAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLCTSWL*FFCRSF
Trigger: GAAGCTCCTACAGAAAAAGCAGAGCCAGCTGGTGCA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGGGCCAGGACGGCCTTaGTGTGCTCACCGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIGPGRP*CAHRAG
Trigger: ACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTAGGTGGGTCTCTTGCTaGTTCATCAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLRWVSC*FISSHI
Trigger: GATGTGTGAGCTGATGAAGCAGCAAGAGACCCACCT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTTCAGGTGGGTCTCTTaGTGCTTCATCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAFRWVS*CFISSH
Trigger: GTGTGAGCTGATGAAGCAGCAAGAGACCCACCTGAA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCAACACTCACACAGCTaGTTGAGGGCACCTAGATGT +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAQHSHS*LRAPRC
Trigger: ACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTGTTG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGCAAAGGCTGCACCTTaGCTGGGGCCCACATTCCTG +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAAKAAP*LGPTFL
Trigger: CAGGAATGTGGGCCCCAGGCAAGGTGCAGCCTTTGC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTCTATTAGCAGAGCCATaGGCTCTTGAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLLLAEP*ALELHL
Trigger: CAGGTGAAGCTCAAGAGCGCATGGCTCTGCTAATAG...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCAGGAGAGCCCGACGTaGCGGGGCAGGCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFQESPT*RGRLSG
Trigger: CCCCGAAAGCCTGCCCCGGCACGTCGGGCTCTCCTG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTCCTGGGCTGCTTTTTaGATTGGATTGTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSWAAF*IGLFGS
Trigger: GCTGCCAAACAATCCAATCCAAAAAGCAGCCCAGGA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTGCTTCCGGTTGTCCTaGGCTGCTTTTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEACFRLS*AAFWIG
Trigger: TCCAATCCAAAAAGCAGCCCAGGACAACCGGAAGCA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCCTGTGGCCTTCGATaGTCTCGGTCTCCGACCTCG +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASCGLR*SRSPTS
Trigger: CGAGGTCGGAGACCGAGACCATCGAAGGCCACAGGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGGGACCGGTACATGGTaGTTTCTTTCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPGTGTW*FLSPAS
Trigger: AGAAGCTGGAGAAAGAAACCACCATGTACCGGTCCC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGAGTCAGGCAATTATGTaGGCCACTGTAGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQSQAIM*ATVGLS
Trigger: GGAAAGGCCTACAGTGGCCCACATAATTGCCTGACT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAAGGTCTAGACATGGATaGAGCTGTGAGCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPRSRHG*SCEQRL
Trigger: CAGCCTTTGCTCACAGCTCCATCCATGTCTAGACCT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGACCTCATCTGCAGACTaGCCTGAAGGTCTAGACATG +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQTSSAD*PEGLDM
Trigger: CATGTCTAGACCTTCAGGCCAGTCTGCAGATGAGGT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACAGCTCAGCAGGCCTTaGCCCTCCCCCGTGGACACC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIQLSRP*PSPVDT
Trigger: GGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGTTCCTTCTCTCCATTaGCTACTGGAGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPVPSLH*LLELVQ
Trigger: CTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAAC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAAGCAAGGCGCTTCTGTaGCCCTGGGGGAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHISKALL*PWGSWV
Trigger: CACCCAGCTCCCCCAGGGTCACAGAAGCGCCTTGCT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCTATCCATCTTGGTCTaGGTCATTCTGTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEALSILV*VILLSQ
Trigger: CTGGGACAACAGAATGACTCAGACCAAGATGGATAG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGCTAGGTATGGAAGATaGAGGGACCTGCAGGACAAT +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSARYGR*RDLQDN
Trigger: ATTGTCCTGCAGGTCCCTTCATCTTCCATACCTAGC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACCGGTTGTCCTGGGCTaGTTTTTGGATTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPPVVLG*FLDWIV
Trigger: AACAATCCAATCCAAAAAGCAGCCCAGGACAACCGG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCCTTCTCCCGCTGGTaGCGCTCTTCTGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASFSRW*RSSASF
Trigger: AAAGGAGGCAGAAGAGCGGCACCAGCGGGAGAAGGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACCTCTGGGACTCTACTaGCTCTTTCAGGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPPLGLY*LFQEKI
Trigger: GATTTTCTCCTGAAAGAGGCAGTAGAGTCCCAGAGG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAGGTGGGTCTCTTGCTaGTTCATCAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSRWVSC*FISSHI
Trigger: GATGTGTGAGCTGATGAAGCAGCAAGAGACCCACCT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATGCTCAAGTCACTTCTaGCAACTCACTGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPCSSHF*QLTVMA
Trigger: TGCCATCACAGTGAGTTGGCAGAAGTGACTTGAGCA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGCTTGTCAATCATTTGTaGAGGCTAGAGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQLVNHL*RLERHL
Trigger: CAGGTGCCTCTCTAGCCTGCACAAATGATTGACAAG...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCTGCTTCCGGTTGTCCTaGGCTGCTTTTTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSCFRLS*AAFWIG
Trigger: TCCAATCCAAAAAGCAGCCCAGGACAACCGGAAGCA...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTGGCTGGGCCGCTCCTaGGCTCCCTCGGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSWLGRS*APSGPA
Trigger: AGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGGCTTCCGAGGAGCCTaGCTGCTGCCGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMGFRGA*LLPGPS
Trigger: AGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGAAGCC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAAGCCAGCTTCTCCTCTaGGGTACTCAGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSQLLL*GTQSIQ
Trigger: TTGAATACTCTGAGTACCCCAGAGGAGAAGCTGGCT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGTTCTCTTGCACCAGCTaGCTCTGCTTTTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQFSCTS*LCFFCR
Trigger: CCTACAGAAAAAGCAGAGCCAGCTGGTGCAAGAGAA...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAGCTCACACATCCTCTaGGACTCTACTGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSSSHIL*DSTASF
Trigger: GAAAGAGGCAGTAGAGTCCCAGAGGATGTGTGAGCT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAGAGGCAGCTGGACATaGGACCCAGCAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMARGSWT*DPATAA
Trigger: TGCAGCAGTTGCTGGGTCCCATGTCCAGCTGCCTCT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGGTTAGACAACAGCTATaGGCTCCCACACAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQVRQQL*APTQEE
Trigger: TTCTTCCTGTGTGGGAGCCCATAGCTGTTGTCTAAC...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTCTGCAGCCATTTTATaGATTTCTGGGGCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASAAIL*ISGAQS
Trigger: TGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGGCTTGGCACAAACACTaGCTAATACCCTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQAWHKH*LIPWQV
Trigger: AACTTGCCAGGGTATTAGCCAGTGTTTGTGCCAAGC...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACTTGGCCCTCCCCCGTaGACACCAGGCAGCTCCACT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHILGPPP*TPGSST
Trigger: AGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCAGGGCCACTGTCAGTaGGGGAGCCCTGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSQGHCQ*GSPGHQ
Trigger: CTGGTGGCCAGGGCTCCCTCACTGACAGTGGCCCTG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAGGCCCAGTCTGGCCTaGTGCTTCTGTGCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMRPSLA*CFCARC
Trigger: GCACCGAGCACAGAAGCATCAGGCCAGACTGGGCCT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTGCCCAAGGGGCTCCTaGCCAGCACATCATCCCACG +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMCPRGS*PAHHPT
Trigger: CGTGGGATGATGTGCTGGTCAGGAGCCCCTTGGGCA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTGTCCACACAGTATGTaGTCAGTATGTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGCPHSM*SVCLPV
Trigger: AACTGGAAGACATACTGAGCACATACTGTGTGGACA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCTGTAGGAGCTTCATCTaGTTCTGTGAATTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSCRSFI*FCEFRC
Trigger: GCACCGGAATTCACAGAAGCAGATGAAGCTCCTACA...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGGCTCTCAAGCTTGCTaGGGGCCAGGACGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFGSQAC*GPGRPC
Trigger: GCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCCTCCCGGGCCCGCTaGACACCTTCTTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHISSRAR*TPSSLR
Trigger: CCTCAAGGAAGAAGGTGTGCAGCGGGCCCGGGAGGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGCAGGGCCTTGTTGCTaGTCTCCCACCGGGACCGGT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFAGPCC*SPTGTG
Trigger: ACCGGTCCCGGTGGGAGAGCAGCAACAAGGCCCTGC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCATCCAAAATTGCAAGTaGCAGATGCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSIQNCK*QMPARS
Trigger: TGACCTGGCTGGCATCTGGCACTTGCAATTTTGGAT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACACAAAATCCAAAATTaGAAGTGCCAGATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPHKIQN*KCQMPA
Trigger: GGCTGGCATCTGGCACTTGCAATTTTGGATTTTGTG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGATACCCTGGCAAGTTTaGAACAGCAGAACATTCAGC +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQIPWQV*NSRTFS
Trigger: GCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTAT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGCCAGCTGGGGCCACCTaGTCACTGTGGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMPAGAT*SLWPPT
Trigger: TGTAGGAGGCCACAGTGAGCAGGTGGCCCCAGCTGG...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACCAGCTGGGGCCACCTaGTCACTGTGGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIPAGAT*SLWPPT
Trigger: TGTAGGAGGCCACAGTGAGCAGGTGGCCCCAGCTGG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGCTGTGAGCAAAGGCTaGACCTTGCCTGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIAVSKG*TLPGAH
Trigger: GTGGGCCCCAGGCAAGGTGCAGCCTTTGCTCACAGC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCTCCTGGGCTGCTTTTTaGATTGGATTGTTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSSWAAF*IGLFGS
Trigger: GCTGCCAAACAATCCAATCCAAAAAGCAGCCCAGGA...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGTATCTCAGCCAGAGATaGCAGAGATCTCAACACTCA +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQYLSQR*QRSQHS
Trigger: TGAGTGTTGAGATCTCTGCCATCTCTGGCTGAGATA...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGCCTGGGAAACCCAGCTaGGGCCACCTGCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMPGKPS*GHLLTV
Trigger: CACAGTGAGCAGGTGGCCCCAGCTGGGTTTCCCAGG...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGTGCCTGGCTGTCCCTaGGGTGACCACCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMVPGCP*GDHLCA
Trigger: AGCACAGAGGTGGTCACCCCAGGGACAGCCAGGCAC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAAATTCTTCGCAGCCTaGATCAGAAATCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSKFFAA*IRNPHS
Trigger: GCTGTGGGGATTTCTGATCCAGGCTGCGAAGAATTT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR TCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCACTTCATCTGCTTCTGTaGATTCCGGTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMALHLLL*IPVLLQ
Trigger: CTGGAGGAGCACCGGAATTCACAGAAGCAGATGAAG...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAGTAGGTCCTTGTGTTTaGAGACTTTGTCGATATGCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPVGPCV*RLCRYA
Trigger: AGCATATCGACAAAGTCTTCAAACACAAGGACCTAC...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGCTCCCTTCCCAGCATaGCCCAACACCAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMAPFPA*PNTRLS
Trigger: AGAGAGCCTGGTGTTGGGTCATGCTGGGAAGGGAGC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGGACCTGCAGGACAATaGACTAGCTTCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAGPAGQ*TSFKEK
Trigger: TTTTTCTTTGAAGCTAGTTCATTGTCCTGCAGGTCC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCACCGACCTCGTCACTCTaGCGGATCTCTTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAPTSSL*RISSVF
Trigger: AAACACAGAAGAGATCCGGCAGAGTGACGAGGTCGG...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCAGAGTATTCAATGTCTaGATCAGCAACGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEARVFNV*ISNVIS
Trigger: GGAGATCACGTTGCTGATGCAGACATTGAATACTCT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTAGGACGGCCTTGCTGTaGTCACCGCGCAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSRTALL*SPRRWS
Trigger: GGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTGCTTCTGTGCTCGGTaGTCCTGGGTAGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMCFCAR*SWVARR
Trigger: GCGCCTTGCTACCCAGGAGCACCGAGCACAGAAGCA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCAAGGCCTTGCAAAATaGCCTATGTACGTAAAACTG +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAQGLAK*PMYVKL
Trigger: CAGTTTTACGTACATAGGGCATTTTGCAAGGCCTTG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGCCGTTCTTTTTGTCTTaGTTCTTCATTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGPFFLS*FFIVMS
Trigger: GCTCATCACAATGAAGAACCAAGACAAAAAGAACGG...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTGCTCACCGCGCAGGTaGTCCTTCTCTTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMCSPRR*SFSCTS
Trigger: GCTGGTGCAAGAGAAGGACCACCTGCGCGGTGAGCA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTATACCTCGCTGCTTTTaGAAAGTGTGTTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLIPRCF*KVCSGT
Trigger: AGTTCCAGAACACACTTTCCAAAAGCAGCGAGGTAT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAACTGAGAAGCATCATTaGCCTGGTCCTGGCACTACC +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMATEKHH*PGPGTT
Trigger: GGTAGTGCCAGGACCAGGCCAATGATGCTTCTCAGT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAGCATCCCTCTTCCTTaGAAGGTCCTCAATACAAAC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSSIPLP*KVLNTN
Trigger: GTTTGTATTGAGGACCTTCCAAGGAAGAGGGATGCT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAATAGTAGTTATGTACTaGAGTGGGGGTAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPIVVMY*SGGRTG
Trigger: TCCTGTTCTACCCCCACTCCAGTACATAACTACTAT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGCAGCTGTAGTGATTaGTTGATTTGGTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGSSCSD*LIWSMK
Trigger: CTTCATTGACCAAATCAACCAATCACTACAGCTGCT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGCAAGGCGGAAAGGCTaGGGCAGCAGCTGGAGAATC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIARRKG*GSSWRI
Trigger: GATTCTCCAGCTGCTGCCCCAGCCTTTCCGCCTTGC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCACAGACAAGCCACTaGCTTCATCTGTACACACCC +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASQTSH*LHLYTP
Trigger: GGGTGTGTACAGATGAAGTCAGTGGCTTGTCTGTGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCTGCCAACTCACTGTaGTGGCAGCTACAGATGACA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASANSL*WQLQMT
Trigger: TGTCATCTGTAGCTGCCATCACAGTGAGTTGGCAGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGCAGCTAGGAGGGCCTaGGCTGACCAAGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSAARRA*ADQASP
Trigger: AGGGCTTGCTTGGTCAGCTCAGGCCCTCCTAGCTGC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCACTAGCAAACACTCTGTaGGGTTGGCAGCTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMALANTL*GWQLLY
Trigger: GTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAG...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAGCTGGACAAGGCCCTaGAAACAATTTACTATTAGC +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSSWTRP*KQFTIS
Trigger: GCTAATAGTAAATTGTTTTCAGGGCCTTGTCCAGCT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGAGGAGCCTGGCTGCTaGCGGGACCTTCTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFEEPGC*RDLLLL
Trigger: TAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCAAGGTATAAATGCATTTaGAAGGCCTTGCAAAATGCC +
Preference number: 4 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPRYKCI*KALQNA
Trigger: GGCATTTTGCAAGGCCTTGCAAATGCATTTATACCT...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGCACCCAGGCACCACTaGTACAGCATCCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMAPRHH*YSIPLP
Trigger: AGGAAGAGGGATGCTGTAGCAGTGGTGCCTGGGTGC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGAAGGAGAAATGGTGTaGCATTCATTTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: APDQHIIPRKNILQVPCSEGEMV*HSFAIS
Trigger: AGAGATGGCAAATGAATGGCACACCATTTCTCCTTC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGATAGGCACCTCCCCTaGATCTGGCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSDRHLP*IWPRTW
Trigger: CCAGGTCCTGGGCCAGATGCAGGGGAGGTGCCTATC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCACTATTAGCAGAGCCATaGGCTCTTGAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMALLAEP*ALELHL
Trigger: CAGGTGAAGCTCAAGAGCGCATGGCTCTGCTAATAG...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCAGACTGAGCCGTTCTaGCTTGAGCCCCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSQTEPF*LEPPPA
Trigger: AGCCGGAGGGGGCTCAAGCCAGAACGGCTCAGTCTG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAAATCCTTCTCCCGCTaGTGCCGCTCTTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMKSFSR*CRSSAS
Trigger: GGAGGCAGAAGAGCGGCACCAGCGGGAGAAGGATTT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCCTGGCTTCAGCAATaGGCTGCTCAGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHISWLQQ*AAQHGS
Trigger: GCTCCCATGCTGAGCAGCCCATTGCTGAAGCCAGGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGCATTTTATGGATTTCTaGGGCCCAGTCAATAGTTCA +
Preference number: 4 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQHFMDF*GPVNSS
Trigger: TGAACTATTGACTGGGCCCCAGAAATCCATAAAATG...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCTGATGCAGATCAGTaGTACCTGCCCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHISDADQ*YLPWGR
Trigger: CCTGCCCCAGGGCAGGTACCACTGATCTGCATCAGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCTGTACCAGCTTAGCCTaGCACAGGGGCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFCTSLA*HRGWGR
Trigger: CCTACCCCAGCCCCTGTGCCAGGCTAAGCTGGTACA...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGCACACCTTCTTCCTTaGGGGAGCGGTTGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSAHLLP*GSGCAA
Trigger: AGCGGCACAACCGCTCCCTCAAGGAAGAAGGTGTGC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMACSICS*MSFSVT
Trigger: GGTGACACTGAATGACATTCAGCTGCAGATGGAACA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGGGCAGGGAGGGGTCTaGGCCTCAAATCAGACAGAG +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSGQGGV*ASNQTE
Trigger: CTCTGTCTGATTTGAGGCTCAGACCCCTCCCTGCCC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAACATGGATGGAGCTGTaGGCAAAGGCTGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHITWMEL*AKAAPC
Trigger: GCAAGGTGCAGCCTTTGCTCACAGCTCCATCCATGT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAAGGCTCCCCATTCCTTaGCACATAGGTCCGGGACTT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIRLPIP*HIGPGL
Trigger: AAGTCCCGGACCTATGTGGCAAGGAATGGGGAGCCT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCACAGAAACAACTGTCTaGAGCCATTTTATGGATTTC +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEATETTV*SHFMDF
Trigger: GAAATCCATAAAATGGCTGCAGACAGTTGTTTCTGT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGGTGTGCCATTCATTTaGCATCTCTGGTCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAGVPFI*HLWSQS
Trigger: TGACTGAGACCAGAGATGGCAAATGAATGGCACACC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAGCCAGCTTCTCCTCTaGGGTACTCAGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASQLLL*GTQSIQ
Trigger: TTGAATACTCTGAGTACCCCAGAGGAGAAGCTGGCT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCTGTGCTCGGTGCTCCTaGGTAGCAAGGCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFCARCS*VARRFC
Trigger: ACAGAAGCGCCTTGCTACCCAGGAGCACCGAGCACA...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGATGGGAACTGGTGGTaGCCTCTCAGGACTGAAACC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMDGNWW*PLRTET
Trigger: GGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCCTACACCACCACACTaGGATCCAGCAGCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFPTPPH*DPAAPV
Trigger: GACTGGAGCTGCTGGATCCCAGTGTGGTGGTGTAGG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGAGCTTCACCTGCTGTaGTCCCCTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIELHLL*SPGGKA
Trigger: AGCTTTTCCTCCAGGGGACCACAGCAGGTGAAGCTC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGACTCACACAGCTGCTTaGGGGCACCTAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMTHTAA*GHLDVK
Trigger: CTTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGATCTGCAGACTGGCCTaGAGGTCTAGACATGGATGG +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMICRLA*RSRHGW
Trigger: CCATCCATGTCTAGACCTTCAGGCCAGTCTGCAGAT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAATCTGCAGACTGGCCTaGAGGTCTAGACATGGATGG +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIICRLA*RSRHGW
Trigger: CCATCCATGTCTAGACCTTCAGGCCAGTCTGCAGAT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTCCTTCTCCCGCTGGTaGCGCTCTTCTGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSFSRW*RSSASF
Trigger: AAAGGAGGCAGAAGAGCGGCACCAGCGGGAGAAGGA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGCTTCAGCAATGGGCTaGTCAGCATGGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIASAMG*SAWEPF
Trigger: AAAAGGCTCCCATGCTGAGCAGCCCATTGCTGAAGC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGGACCCAGCAACTGCTaGATGGAGACAGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFGPSNC*METVLM
Trigger: CATCAGCACTGTCTCCATGCAGCAGTTGCTGGGTCC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGACCGGGACCGGTACATaGTGGTTTCTTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMTGTGT*WFLSPA
Trigger: AGCTGGAGAAAGAAACCACCATGTACCGGTCCCGGT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCTCAGAAATAATCCTTTaGGTGATCTCTTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEASEIIL*VISCQS
Trigger: TGATTGACAAGAGATCACCCAAAGGATTATTTCTGA...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCATTCAGCATATAGAATaGCTCTACACAGTACATAGT +
Preference number: 4 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAIQHIE*LYTVHS
Trigger: ACTATGTACTGTGTAGAGCCATTCTATATGCTGAAT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTATTCAGCATATAGAATaGCTCTACACAGTACATAGT +
Preference number: 4 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLIQHIE*LYTVHS
Trigger: ACTATGTACTGTGTAGAGCCATTCTATATGCTGAAT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACCTGAGCTCAGCCCATaGTCCGATAACCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIPELSP*SDNLME
Trigger: TTCCATGAGGTTATCGGACCATGGGCTGAGCTCAGG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
3UTR CAA 72 bp CTTGGTCTGAGTCATTCTGTTGTCCCAGAAAACTGCTaGGCACAAACACTGGCTAATACCCTGGCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LGLSHSVVPENC*AQTLANTLASL
Trigger: CAAACTTGCCAGGGTATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAACAGAATGACTCAGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGAGGTAGCTGAAGTGTaGGTCAGGCAATTATGTGGG +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMEVAEV*VRQLCG
Trigger: CCCACATAATTGCCTGACTCACACTTCAGCTACCTC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTTCTGTGAATTCCGGTaGTCCTCCAGCAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMFCEFR*SSSSSA
Trigger: TGCTGAACTGCTGGAGGAGCACCGGAATTCACAGAA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGGCTGCTTTTTGGATTaGATTGTTTGGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMGCFLD*IVWQPR
Trigger: ACGGGGCTGCCAAACAATCCAATCCAAAAAGCAGCC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGATCTCTTCTGTGTTTaGATCCCCCTTGGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIDLFCV*IPLGGF
Trigger: GAACCCTCCAAGGGGGATCCAAACACAGAAGAGATC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAGCTCACACATCCTCTaGGACTCTACTGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMSSHIL*DSTASF
Trigger: GAAAGAGGCAGTAGAGTCCCAGAGGATGTGTGAGCT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTAGTGCTGATGGGAACTaGTGGTGGCCTCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSADGN*WWPLRT
Trigger: AGTCCTGAGAGGCCACCACCAGTTCCCATCAGCACT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAATAGTAGTTATGTACTaGAGTGGGGGTAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAIVVMY*SGGRTG
Trigger: TCCTGTTCTACCCCCACTCCAGTACATAACTACTAT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCCCAGAAAACTGCTTaGCACAAACACTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASQKTA*HKHWLI
Trigger: TATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAACCTCATCTGCAGACTaGCCTGAAGGTCTAGACATG +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHITSSAD*PEGLDM
Trigger: CATGTCTAGACCTTCAGGCCAGTCTGCAGATGAGGT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCATCTGGCCCAGGACCTaGGCTACTTTGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFIWPRT*ATLESR
Trigger: TCTGCTTTCCAAAGTAGCCCAGGTCCTGGGCCAGAT...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCTAGCAAACACTCTGTaGGGTTGGCAGCTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFLANTL*GWQLLY
Trigger: GTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGAGGTAGCTGAAGTGTaGGTCAGGCAATTATGTGGG +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFEVAEV*VRQLCG
Trigger: CCCACATAATTGCCTGACTCACACTTCAGCTACCTC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCATTGTGATGAGCGATaGTGGGTCAGGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFHCDER*WVRRRS
Trigger: GGATCTTCTCCTGACCCAGCATCGCTCATCACAATG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTCTTGTTCAGGTCATTaGGCTCTGTCTGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSCSGH*ALSAVP
Trigger: GGGCACTGCAGACAGAGCGCAATGACCTGAACAAGA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCATTGCAAGTGCCAGATaGCAGCCAGGTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFIASAR*QPGQNI
Trigger: GATGTTCTGACCTGGCTGGCATCTGGCACTTGCAAT...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGATCCAAAATTGCAAGTaGCAGATGCCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMIQNCK*QMPARS
Trigger: TGACCTGGCTGGCATCTGGCACTTGCAATTTTGGAT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCACCCCCATCCCCAATaGAAGCCCACTGTACACTTA +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSHPHPQ*KPTVHL
Trigger: TAAGTGTACAGTGGGCTTGCATTGGGGATGGGGGTG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAAATCAGACAGAGAAATaGTCAAGTCACTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KRSWETLHRTAVSQPEMANQTEK*SSHFCQ
Trigger: TTGGCAGAAGTGACTTGAGCATTTCTCTGTCTGATT...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGGTGTGCCATTCATTTaGCATCTCTGGTCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIGVPFI*HLWSQS
Trigger: TGACTGAGACCAGAGATGGCAAATGAATGGCACACC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCAACACTCACACAGCTaGTTGAGGGCACCTAGATGT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFQHSHS*LRAPRC
Trigger: ACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTGTTG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTAGCTTCTCCAGCCGTTaGATTTTTACCTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSFSSR*IFTCRP
Trigger: GGGCCTGCAGGTAAAAATCCAACGGCTGGAGAAGCT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCCACAGGTAAGCTTGTaGCAAAGCCATCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSPQVSL*QSHQKP
Trigger: GGGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGGACCTGGGCTACTTTaGAAAGCAGAAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSGPGLL*KAEAEQ
Trigger: CTGCTCTGCTTCTGCTTTCCAAAGTAGCCCAGGTCC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCCTGAGCTCAGCCCATaGTCCGATAACCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSPELSP*SDNLME
Trigger: TTCCATGAGGTTATCGGACCATGGGCTGAGCTCAGG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCAATAGCAGGCAACTCTaGTGCAGATCAGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFNSRQL*CRSVVP
Trigger: AGGTACCACTGATCTGCATCAGAGTTGCCTGCTATT...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGTTCAGCATACTTCTTaGACAGAGCAGCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFVQHTS*TEQPAS
Trigger: AGAAGCTGGCTGCTCTGTGCAAGAAGTATGCTGAAC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTATAGGGCAAGCTGTTaGTTCAGGTGGGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSYRASC*FRWVSC
Trigger: GCAAGAGACCCACCTGAAGCAACAGCTTGCCCTATA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACGTTGGATTTTTACCTaGAGGCCCTCCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIRWIFT*RPSSSL
Trigger: TAAAGAACTGGAGGGCCTGCAGGTAAAAATCCAACG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTATTGCAAGTGCCAGATaGCAGCCAGGTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSIASAR*QPGQNI
Trigger: GATGTTCTGACCTGGCTGGCATCTGGCACTTGCAAT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGGCATTTGCAAGGCCTTaGAAAATGCCCTATGTACGT +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMAFARP*KMPYVR
Trigger: ACGTACATAGGGCATTTTGCAAGGCCTTGCAAATGC...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGTTGTCCCAGAAAACTaGTTGGCACAAACACTGGCT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFVVPEN*LAQTLA
Trigger: AGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAAC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGGCTGCTTTTTGGATTaGATTGTTTGGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSGCFLD*IVWQPR
Trigger: ACGGGGCTGCCAAACAATCCAATCCAAAAAGCAGCC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATATCTCAGCCAGAGATaGCAGAGATCTCAACACTCA +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIYLSQR*QRSQHS
Trigger: TGAGTGTTGAGATCTCTGCCATCTCTGGCTGAGATA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGAGCTGGACAAGGCCCTaGAAACAATTTACTATTAGC +
Preference number: 4 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMSWTRP*KQFTIS
Trigger: GCTAATAGTAAATTGTTTTCAGGGCCTTGTCCAGCT...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATGTCCACACAGTATGTaGTCAGTATGTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHICPHSM*SVCLPV
Trigger: AACTGGAAGACATACTGAGCACATACTGTGTGGACA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGTTGTCCCAGAAAACTaGTTGGCACAAACACTGGCT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSVVPEN*LAQTLA
Trigger: AGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGACAAC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATTGGATTGGATTGTTTaGCAGCCCCGTTCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHILDWIV*QPRSFC
Trigger: ACAAAAAGAACGGGGCTGCCAAACAATCCAATCCAA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACCATCCTATCCATCTTaGTCTGAGTCATTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHIPSYPS*SESFCC
Trigger: ACAACAGAATGACTCAGACCAAGATGGATAGGATGG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGCATTTGCAAGGCCTTaGAAAATGCCCTATGTACGT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSAFARP*KMPYVR
Trigger: ACGTACATAGGGCATTTTGCAAGGCCTTGCAAATGC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTAGCATCCCTCTTCCTTaGAAGGTCCTCAATACAAAC +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSIPLP*KVLNTN
Trigger: GTTTGTATTGAGGACCTTCCAAGGAAGAGGGATGCT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCTCCCAGAAAACTGCTTaGCACAAACACTGGCTAATA +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFSQKTA*HKHWLI
Trigger: TATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGA...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR TCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGGACCTGCAGGACAATaGACTAGCTTCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSGPAGQ*TSFKEK
Trigger: TTTTTCTTTGAAGCTAGTTCATTGTCCTGCAGGTCC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAACAGAAACAACTGTCTaGAGCCATTTTATGGATTTC +
Preference number: 4 (lower is better)
Translates to: QTLANTLASLQQQNIQHITETTV*SHFMDF
Trigger: GAAATCCATAAAATGGCTGCAGACAGTTGTTTCTGT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR GCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTGAAGGAGAAATGGTGTaGCATTCATTTGCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSEGEMV*HSFAIS
Trigger: AGAGATGGCAAATGAATGGCACACCATTTCTCCTTC...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCCGTTCTTTTTGTCTTaGTTCTTCATTGTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFPFFLS*FFIVMS
Trigger: GCTCATCACAATGAAGAACCAAGACAAAAAGAACGG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCTTCATTTGCCATCTCTaGTCTCAGTCACACATGATT +
Preference number: 4 (lower is better)
Translates to: SAAILWISGAQSIVQFHFFICHL*SQSHMI
Trigger: AATCATGTGTGACTGAGACCAGAGATGGCAAATGAA...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CCA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTAGCAGCTGTAGTGATTaGTTGATTTGGTCAATGAAG +
Preference number: 4 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSSCSD*LIWSMK
Trigger: CTTCATTGACCAAATCAACCAATCACTACAGCTGCT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp CGGCTTCCGAGGAGCCTGGCTGCTGCCGGGACCTTCTGCTTCTACTaGAGGAGCCGCCTGGCTGGGCCGCTCCTGGGCTCCCTCGGGTCC +
Preference number: 5 (lower is better)
Translates to: RLPRSLAAAGTFCFY*RSRLAGPLLGSLGS
Trigger: GGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGAAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp AGCCCCCTCCGGCTTCCGAGGAGCCTGGCTGCTGCCGGGACCTTCTaGTTCTACTGCAGGAGCCGCCTGGCTGGGCCGCTCCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SPLRLPRSLAAAGTF*FYCRSRLAGPLLGS
Trigger: GGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGAAGCCGGAGGGGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCGGGCCAGGACGGCCTaGCTGTGCTCACCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SAQQALALPRGHQAAPLARARTA*LCSPRR
Trigger: CCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp CCGTTCTGGCTTGAGCCCCCTCCGGCTTCCGAGGAGCCTGGCTGCTaGCGGGACCTTCTGCTTCTACTGCAGGAGCCGCCTGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PFWLEPPPASEEPGC*RDLLLLLQEPPGWA
Trigger: GGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGAAGCCGGAGGGGGCTCAAGCCAGAACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 90 bp GCCTGGCTGCTGCCGGGACCTTCTGCTTCTACTGCAGGAGCCGCCTaGCTGGGCCGCTCCTGGGCTCCCTCGGGTCCTGCTTCCGGTTGT +
Preference number: 5 (lower is better)
Translates to: AWLLPGPSASTAGAA*LGRSWAPSGPASGC
Trigger: ACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp GAGCCGTTCTGGCTTGAGCCCCCTCCGGCTTCCGAGGAGCCTGGCTaGTGCCGGGACCTTCTGCTTCTACTGCAGGAGCCGCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: EPFWLEPPPASEEPG*CRDLLLLLQEPPGW
Trigger: CCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCGGAAGCCGGAGGGGGCTCAAGCCAGAACGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp GGGAGCGGTTGTGCCGCTGCAGCTCACGGCATAGGCTCTCAAGCTTaGTGCGGGCCAGGACGGCCTTGCTGTGCTCACCGCGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: GSGCAAAAHGIGSQA*CGPGRPCCAHRAGG
Trigger: ACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCACAACCGCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp AGCGGTTGTGCCGCTGCAGCTCACGGCATAGGCTCTCAAGCTTGCTaGGGGCCAGGACGGCCTTGCTGTGCTCACCGCGCAGGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: SGCAAAAHGIGSQAC*GPGRPCCAHRAGGP
Trigger: AGGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCACAACCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCTTGAGGGAGCGGTaGTGCCGCTGCAGCTCACGG +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSSLRER*CRCSSR
Trigger: CCGTGAGCTGCAGCGGCACAACCGCTCCCTCAAGGA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp GCTCACGGCATAGGCTCTCAAGCTTGCTGCGGGCCAGGACGGCCTTaGTGTGCTCACCGCGCAGGTGGTCCTTCTCTTGCACCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: AHGIGSQACCGPGRP*CAHRAGGPSLAPAG
Trigger: GCCAGCTGGTGCAAGAGAAGGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 90 bp GGACCTTCTGCTTCTACTGCAGGAGCCGCCTGGCTGGGCCGCTCCTaGGCTCCCTCGGGTCCTGCTTCCGGTTGTCCTGGGCTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: GPSASTAGAAWLGRS*APSGPASGCPGLLF
Trigger: AAAAAGCAGCCCAGGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCCAGTATGTCTTCCAGTaGGCGGCTCAGCTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: SAQQALALPRGHQAAPLAQYVFQ*AAQLLR
Trigger: TCTGAGGAGCTGAGCCGCCAACTGGAAGACATACTG...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGTCCTTGAGGGAGCGGTaGTGCCGCTGCAGCTCACGG +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLESLRER*CRCSSR
Trigger: CCGTGAGCTGCAGCGGCACAACCGCTCCCTCAAGGA...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 90 bp GGCCCCTCTGGCCTCCTCTCAGGGCCACTGTCAGTGAGGGAGCCCTaGCCACCAGCACTCAGGTCCTGTACCCTCTTGTTCAGGTCATTG +
Preference number: 5 (lower is better)
Translates to: GPSGLLSGPLSVREP*PPALRSCTLLFRSL
Trigger: CAATGACCTGAACAAGAGGGTACAGGACCTGAGTGCTGGTGGCCAGGGCTCCCTCACTGACAGTGGCCCTGAGAGGAGGCCAGAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGCGGGCCAGGACGGCCTaGCTGTGCTCACCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQRARTA*LCSPRR
Trigger: CCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCG...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGGGCTGCTTTTTGGATaGGATTGTTTGGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSGLLFG*DCLAAP
Trigger: CGGGGCTGCCAAACAATCCAATCCAAAAAGCAGCCC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTTCTCTTGGCGCAGCTaGGAGTTGCGCTCATTGTGC +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSFSWRS*ELRSLC
Trigger: GCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGAA...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCAGCTTCTCCAGCCGTaGGATTTTTACCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSQLLQP*DFYLQA
Trigger: GGCCTGCAGGTAAAAATCCAACGGCTGGAGAAGCTG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCCTCTTGTTCAGGTCATaGCGCTCTGTCTGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSLLFRS*RSVCSA
Trigger: GGCACTGCAGACAGAGCGCAATGACCTGAACAAGAG...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCAAACACTCTGTGAGGTaGGCAGCTCTTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: SAQQALALPRGHQAAPLAKHSVR*AALVPA
Trigger: AGCTGGTACAAGAGCTGCCAACCTCACAGAGTGTTT...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCTCCACTGGCCGCAGCCCCGTTCTTTTaGTCTTGGTTCTTCATTGTG +
Preference number: 5 (lower is better)
Translates to: SAQQALALPRGHQAAPLAAAPFF*SWFFIV
Trigger: CACAATGAAGAACCAAGACAAAAAGAACGGGGCTGC...GGCCAGTGGAGCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGCTGAGCCGTTCTGGCTaGAGCCCCCTCCGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQLSRSG*SPLRLP
Trigger: CGGAAGCCGGAGGGGGCTCAAGCCAGAACGGCTCAG...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCTGAGCCGTTCTGGCTaGAGCCCCCTCCGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEALSRSG*SPLRLP
Trigger: CGGAAGCCGGAGGGGGCTCAAGCCAGAACGGCTCAG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGCAGGTGGTCCTTCTCTaGCACCAGCTGGCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEQVVLL*HQLALL
Trigger: AAGCAGAGCCAGCTGGTGCAAGAGAAGGACCACCTG...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATCAGCTCAGCAGGCCTaGGCCCTCCCCCGTGGACAC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSAQQA*ALPRGH
Trigger: GTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 90 bp GCTGGGCCGCTCCTGGGCTCCCTCGGGTCCTGCTTCCGGTTGTCCTaGGCTGCTTTTTGGATTGGATTGTTTGGCAGCCCCGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: AGPLLGSLGSCFRLS*AAFWIGLFGSPVLF
Trigger: AAAAAGAACGGGGCTGCCAAACAATCCAATCCAAAAAGCAGCCCAGGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGGGCTGCTTTTTGGATaGGATTGTTTGGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEGLLFG*DCLAAP
Trigger: CGGGGCTGCCAAACAATCCAATCCAAAAAGCAGCCC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGTCCTGGGCTGCTTTTaGGATTGGATTGTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSVLGCF*DWIVWQ
Trigger: CTGCCAAACAATCCAATCCAAAAAGCAGCCCAGGAC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGCAGTATGTCTTCCAGTaGGCGGCTCAGCTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEQYVFQ*AAQLLR
Trigger: TCTGAGGAGCTGAGCCGCCAACTGGAAGACATACTG...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACATAGGCTCTCAAGCTaGCTGCGGGCCAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPHRLSS*LRARTA
Trigger: GGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAACCCACAGGTAAGCTaGTGGCAAAGCCATCAGAAG +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSNPQVS*WQSHQK
Trigger: CTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCGCTTTTTGGATTGGATaGTTTGGCAGCCCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSAFWIG*FGSPVL
Trigger: AAGAACGGGGCTGCCAAACAATCCAATCCAAAAAGC...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGTGCACACCTTCTTCCTaGAGGGAGCGGTTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGCTPSS*RERLCR
Trigger: GCGGCACAACCGCTCCCTCAAGGAAGAAGGTGTGCA...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATCAAGCAGGGCCTTGTaGCTGCTCTCCCACCGGGAC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPSSRAL*LLSHRD
Trigger: GTCCCGGTGGGAGAGCAGCAACAAGGCCCTGCTTGA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp TTCTCCTGTGGCCTTCGATGGTCTCGGTCTCCGACCTCGTCACTCTaGCGGATCTCTTCTGTGTTTGGATCCCCCTTGGAGGGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: FSCGLRWSRSPTSSL*RISSVFGSPLEGSF
Trigger: GAAGGAACCCTCCAAGGGGGATCCAAACACAGAAGAGATCCGGCAGAGTGACGAGGTCGGAGACCGAGACCATCGAAGGCCACAGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGCAGCTCCATGTTCTCTaGGCGCAGCTTGGAGTTGCG +
Preference number: 5 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGQLHVL*AQLGVA
Trigger: CGCAACTCCAAGCTGCGCCAAGAGAACATGGAGCTG...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AGCTGGAGAATCAGCTCAGCAGGCCTTGGCCCTCCCCCGTGGACACCAGGCAGCAATACCTCGCTGCTTTaGGAAAGTGTGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: SWRISSAGLGPPPWTPGSNTSLL*ESVFWN
Trigger: GTTCCAGAACACACTTTCCAAAAGCAGCGAGGTATT...GCTGCCTGGTGTCCACGGGGGAGGGCCAAGGCCTGCTGAGCTGATTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAAACACTCTGTGAGGTaGGCAGCTCTTGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEKHSVR*AALVPA
Trigger: AGCTGGTACAAGAGCTGCCAACCTCACAGAGTGTTT...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTAGCAAAGGCTGCACCTaGCCTGGGGCCCACATTCCT +
Preference number: 5 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLSKGCT*PGAHIP
Trigger: AGGAATGTGGGCCCCAGGCAAGGTGCAGCCTTTGCT...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGCAGGTGGTCCTTCTCTaGCACCAGCTGGCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQQVVLL*HQLALL
Trigger: AAGCAGAGCCAGCTGGTGCAAGAGAAGGACCACCTG...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATGGCGCAGCTTGGAGTaGCGCTCATTGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPWRSLE*RSLCCS
Trigger: GGAACAGCACAATGAGCGCAACTCCAAGCTGCGCCA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGAATCAGGACAAATCTaGAGGATTGCACATGTGGGG +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEESGQI*RIAHVG
Trigger: CCCCACATGTGCAATCCTCAAGATTTGTCCTGATTC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCTGAGCGCCCTGCCAGGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGGTCCCAGAAAACTGCTaGGCACAAACACTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: ALSALPGLCLGTPFPGLEVPENC*AQTLAN
Trigger: ATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGAC...CTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCCTGGCAGGGCGCTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp CTGTGCTCACCGCGCAGGTGGTCCTTCTCTTGCACCAGCTGGCTCTaGTTTTTCTGTAGGAGCTTCATCTGCTTCTGTGAATTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: LCSPRRWSFSCTSWL*FFCRSFICFCEFRC
Trigger: GCACCGGAATTCACAGAAGCAGATGAAGCTCCTACAGAAAAAGCAGAGCCAGCTGGTGCAAGAGAAGGACCACCTGCGCGGTGAGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGGTGTTTGGATCCCCCTaGGAGGGTTCCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQVFGSP*EGSFSP
Trigger: TGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACAC...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGTTCTCTTGGCGCAGCTaGGAGTTGCGCTCATTGTGC +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQFSWRS*ELRSLC
Trigger: GCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGAA...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTGCTCAATCAGCTTCTaGAGCCTCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLCSISF*SLSASS
Trigger: GGAGCTGGCTGAGAGGCTCAAGAAGCTGATTGAGCA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACTCTTGTTCAGGTCATaGCGCTCTGTCTGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPLLFRS*RSVCSA
Trigger: GGCACTGCAGACAGAGCGCAATGACCTGAACAAGAG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACATTCTCCAGGTCCCTaGTTCCAGGCAGGAAATCCC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPHSPGP*FQAGNP
Trigger: GGGATTTCCTGCCTGGAACAAGGGACCTGGAGAATG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGCACTCACACAGCTGCTaGAGGGCACCTAGATGTGAA +
Preference number: 5 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGHSHSC*RAPRCE
Trigger: TTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTG...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAGGACCTGGGCTACTTaGGAAAGCAGAAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGRTWAT*ESRSRA
Trigger: TGCTCTGCTTCTGCTTTCCAAAGTAGCCCAGGTCCT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS TCA 90 bp TGGCGCAGCTTGGAGTTGCGCTCATTGTGCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACCTGGAAGTGCGAGGTCACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: WRSLELRSLCCSICS*MSFSVTWKCEVTSL
Trigger: CAAGGAGGTGACCTCGCACTTCCAGGTGACACTGAATGACATTCAGCTGCAGATGGAACAGCACAATGAGCGCAACTCCAAGCTGCGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 90 bp TGTGTTTGGATCCCCCTTGGAGGGTTCCTTCTCTCCATTGACTACTaGAGTTGGTTCAGGCTCCCCATTCCTTGCCACATAGGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: CVWIPLGGFLLSIDY*SWFRLPIPCHIGPG
Trigger: TCCCGGACCTATGTGGCAAGGAATGGGGAGCCTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGTGTTTGGATCCCCCTaGGAGGGTTCCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: APDQHIIPRKNILQVPCSVFGSP*EGSFSP
Trigger: TGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACAC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGGATCTCTTCTGTGTTaGGATCCCCCTTGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAGSLLC*DPPWRV
Trigger: AACCCTCCAAGGGGGATCCAAACACAGAAGAGATCC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGTTGGAGTTGCGCTCATaGTGCTGTTCCATCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQLELRS*CCSICS
Trigger: GCTGCAGATGGAACAGCACAATGAGCGCAACTCCAA...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCCTTCAGGTGGGTCTCTaGCTGCTTCATCAGCTCACA +
Preference number: 5 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEALQVGL*LLHQLT
Trigger: TGTGAGCTGATGAAGCAGCAAGAGACCCACCTGAAG...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCCAGCTTCTCCAGCCGTaGGATTTTTACCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: APDQHIIPRKNILQVPCSQLLQP*DFYLQA
Trigger: GGCCTGCAGGTAAAAATCCAACGGCTGGAGAAGCTG...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCAGGTCCTGTACCCTCTaGTTCAGGTCATTGCGCTCT +
Preference number: 5 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEARSCTL*FRSLRS
Trigger: AGAGCGCAATGACCTGAACAAGAGGGTACAGGACCT...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGGGTGTATTACTTGTCTaGAGCTCTGAAGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQGVLLV*SSEGQG
Trigger: TCCCTGCCCTTCAGAGCTCAAGACAAGTAATACACC...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGCCTTTGGGTGATCTCTaGTCAATCATTTGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGPLGDL*SIICAG
Trigger: GCCTGCACAAATGATTGACAAGAGATCACCCAAAGG...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGTGGTGTGCCATTCATTaGCCATCTCTGGTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQWCAIH*PSLVSV
Trigger: GACTGAGACCAGAGATGGCAAATGAATGGCACACCA...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTGGTGTGCCATTCATTaGCCATCTCTGGTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLWCAIH*PSLVSV
Trigger: GACTGAGACCAGAGATGGCAAATGAATGGCACACCA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS TCA 90 bp TCTCTTCTGTGTTTGGATCCCCCTTGGAGGGTTCCTTCTCTCCATTaGCTACTGGAGTTGGTTCAGGCTCCCCATTCCTTGCCACATAGG +
Preference number: 5 (lower is better)
Translates to: SLLCLDPPWRVPSLH*LLELVQAPHSLPHR
Trigger: CCTATGTGGCAAGGAATGGGGAGCCTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACACAGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGCAGCCCCGTTCTTTTaGTCTTGGTTCTTCATTGTG +
Preference number: 5 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAAAPFF*SWFFIV
Trigger: CACAATGAAGAACCAAGACAAAAAGAACGGGGCTGC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCGTCCTGGGCTGCTTTTaGGATTGGATTGTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: APDQHIIPRKNILQVPCSVLGCF*DWIVWQ
Trigger: CTGCCAAACAATCCAATCCAAAAAGCAGCCCAGGAC...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCATTGTGTTTGAAGACTTaGTCGATATGCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPLCLKT*SICSSR
Trigger: GCGCGAGGAGCATATCGACAAAGTCTTCAAACACAA...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGGGGGCAGGAAGCAGAAAAACCCATGAAGCCAAAGAGGCAGCTGGACATGGGAATACCTCGCTGCTTTaGGAAAGTGTGTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VGAGSRKTHEAKEAAGHGNTSLL*ESVFWN
Trigger: GTTCCAGAACACACTTTCCAAAAGCAGCGAGGTATT...CCCATGTCCAGCTGCCTCTTTGGCTTCATGGGTTTTTCTGCTTCCTGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTCCACAAAATCCAAAATaGCAAGTGCCAGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLPQNPK*QVPDAS
Trigger: GCTGGCATCTGGCACTTGCAATTTTGGATTTTGTGG...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CCTGCACCTCTCTCGCCTAGCAAACACTCTGTGAGGTTGGCAGCTCTTGTACCACCACAAAATCCAAAATaGCAAGTGCCAGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: PAPLSPSKHSVRLAALVPPQNPK*QVPDAS
Trigger: GCTGGCATCTGGCACTTGCAATTTTGGATTTTGTGG...TGGTACAAGAGCTGCCAACCTCACAGAGTGTTTGCTAGGCGAGAGAGGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAACCCACAGGTAAGCTaGTGGCAAAGCCATCAGAAG +
Preference number: 5 (lower is better)
Translates to: APDQHIIPRKNILQVPCSNPQVS*WQSHQK
Trigger: CTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGGAATCAGGACAAATCTaGAGGATTGCACATGTGGGG +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQESGQI*RIAHVG
Trigger: CCCCACATGTGCAATCCTCAAGATTTGTCCTGATTC...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGCCTCTCAGGACTGAAACCCACAGGTAAGCTTGTGGCAAAGCCATCAGAAGCCGTCCCAGAAAACTGCTaGGCACAAACACTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: GLSGLKPTGKLVAKPSEAVPENC*AQTLAN
Trigger: ATTAGCCAGTGTTTGTGCCAAGCAGTTTTCTGGGAC...GGCTTCTGATGGCTTTGCCACAAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCATAGGCTCTCAAGCTaGCTGCGGGCCAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFHRLSS*LRARTA
Trigger: GGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTTTTCCATCTCCTGCTaGAATGTGGTGAATACCTCG +
Preference number: 5 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLFSISC*NVVNTS
Trigger: CGAGGTATTCACCACATTCAAGCAGGAGATGGAAAA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCAAGCAGGGCCTTGTaGCTGCTCTCCCACCGGGAC +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHISSRAL*LLSHRD
Trigger: GTCCCGGTGGGAGAGCAGCAACAAGGCCCTGCTTGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCTTTGGATTGGATTGTTaGGCAGCCCCGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: APDQHIIPRKNILQVPCSFGLDC*AAPFFL
Trigger: CAAAAAGAACGGGGCTGCCAAACAATCCAATCCAAA...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACAGGCTCCCCATTCCTaGCCACATAGGTCCGGGACT +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIQAPHS*PHRSGT
Trigger: AGTCCCGGACCTATGTGGCAAGGAATGGGGAGCCTG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GTGCTGATGGGAACTGGTGGTGGCCTCTCAGGACTGAAACCCACAGGTAAGCTTTGTAGGTCCTTGTGTTaGAAGACTTTGTCGATATGC +
Preference number: 5 (lower is better)
Translates to: VLMGTGGGLSGLKPTGKLCRSLC*KTLSIC
Trigger: GCATATCGACAAAGTCTTCAAACACAAGGACCTACA...AAGCTTACCTGTGGGTTTCAGTCCTGAGAGGCCACCACCAGTTCCCATCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GGGCTCTGCCTAGGGACACCTTTTCCAGGTCTAGAGAATCAAAGGAGCCTCCAGAAACCAACACAGATCTaGGTCCTAAAACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GLCLGTPFPGLENQRSLQKPTQI*VLKLRS
Trigger: TGACCTCAGTTTTAGGACCAAGATCTGTGTTGGTTT...CTGGAGGCTCCTTTGATTCTCTAGACCTGGAAAAGGTGTCCCTAGGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCAGGCTCCCCATTCCTaGCCACATAGGTCCGGGACT +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFQAPHS*PHRSGT
Trigger: AGTCCCGGACCTATGTGGCAAGGAATGGGGAGCCTG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTGGCGCAGCTTGGAGTaGCGCTCATTGTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMWRSLE*RSLCCS
Trigger: GGAACAGCACAATGAGCGCAACTCCAAGCTGCGCCA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp GCTCCTGACCAGCACATCATCCCACGCAAAAACATTCTCCAGGTCCCTTGTTCCAAACCAACACAGATCTaGGTCCTAAAACTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: APDQHIIPRKNILQVPCSKPTQI*VLKLRS
Trigger: TGACCTCAGTTTTAGGACCAAGATCTGTGTTGGTTT...GGAACAAGGGACCTGGAGAATGTTTTTGCGTGGGATGATGTGCTGGTCAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACAGAGCCATGCGCTCTaGAGCTTCACCTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIQSHAL*SFTCCG
Trigger: ACCACAGCAGGTGAAGCTCAAGAGCGCATGGCTCTG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCAGGTTCCTTCTCTCCATaGACTACTGGAGTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: KRSWETLHRTAVSQPEMAGSFSP*TTGVGS
Trigger: TGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACC...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCAGCTCCATGTTCTCTaGGCGCAGCTTGGAGTTGCG +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFQLHVL*AQLGVA
Trigger: CGCAACTCCAAGCTGCGCCAAGAGAACATGGAGCTG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATGCTCAATCAGCTTCTaGAGCCTCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHICSISF*SLSASS
Trigger: GGAGCTGGCTGAGAGGCTCAAGAAGCTGATTGAGCA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATACATTCTCCAGGTCCCTaGTTCCAGGCAGGAAATCCC +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIHSPGP*FQAGNP
Trigger: GGGATTTCCTGCCTGGAACAAGGGACCTGGAGAATG...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTAGCAAAGGCTGCACCTaGCCTGGGGCCCACATTCCT +
Preference number: 5 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSSKGCT*PGAHIP
Trigger: AGGAATGTGGGCCCCAGGCAAGGTGCAGCCTTTGCT...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAGGATCTCTTCTGTGTTaGGATCCCCCTTGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIGSLLC*DPPWRV
Trigger: AACCCTCCAAGGGGGATCCAAACACAGAAGAGATCC...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATAAGGACCTGGGCTACTTaGGAAAGCAGAAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIRTWAT*ESRSRA
Trigger: TGCTCTGCTTCTGCTTTCCAAAGTAGCCCAGGTCCT...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTCAGAGCCATGCGCTCTaGAGCTTCACCTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSQSHAL*SFTCCG
Trigger: ACCACAGCAGGTGAAGCTCAAGAGCGCATGGCTCTG...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp GGCAGCCCCGTTCTTTTTGTCTTGGTTCTTCATTGTGATGAGCGATaGTGGGTCAGGAGAAGATCCTTTAGAAACAAACACAGTTGCTAT +
Preference number: 5 (lower is better)
Translates to: GSPVLFVLVLHCDER*WVRRRSFRNKHSCY
Trigger: ATAGCAACTGTGTTTGTTTCTAAAGGATCTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAAGACAAAAAGAACGGGGCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCAGGTCCTGTACCCTCTaGTTCAGGTCATTGCGCTCT +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFRSCTL*FRSLRS
Trigger: AGAGCGCAATGACCTGAACAAGAGGGTACAGGACCT...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCACTCACACAGCTGCTaGAGGGCACCTAGATGTGAA +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFHSHSC*RAPRCE
Trigger: TTCACATCTAGGTGCCCTCAAGCAGCTGTGTGAGTG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 90 bp GAGCGATGCTGGGTCAGGAGAAGATCCTTTAGAAACAAACACAGTTaGTATTTTCCAGACTTCGAAATTCTTCGCAGCCTGGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: ERCWVRRRSFRNKHS*YFPDFEILRSLDQK
Trigger: TTTCTGATCCAGGCTGCGAAGAATTTCGAAGTCTGGAAAATAGCAACTGTGTTTGTTTCTAAAGGATCTTCTCCTGACCCAGCATCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTCTCTTGTCAATCATTaGTGCAGGCTAGAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMSLVNH*CRLERH
Trigger: GTGCCTCTCTAGCCTGCACAAATGATTGACAAGAGA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATTTGGATTGGATTGTTaGGCAGCCCCGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIFGLDC*AAPFFL
Trigger: CAAAAAGAACGGGGCTGCCAAACAATCCAATCCAAA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCGGTTCCTTCTCTCCATaGACTACTGGAGTTGGTTCA +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFGSFSP*TTGVGS
Trigger: TGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACC...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTGCTGTTGTAGGTCCTaGTGTTTGAAGACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMCCCRS*CLKTLS
Trigger: CGACAAAGTCTTCAAACACAAGGACCTACAACAGCA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTTTTCCATCTCCTGCTaGAATGTGGTGAATACCTCG +
Preference number: 5 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMFSISC*NVVNTS
Trigger: CGAGGTATTCACCACATTCAAGCAGGAGATGGAAAA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp AAAAGGTCATGGGAAACACTTCACAGGACAGCAGTATCTCAGCCAGAGATGGCATCTTTCTCCAGCTTCTaGATCTTCTTAGTCATCTTT +
Preference number: 5 (lower is better)
Translates to: KRSWETLHRTAVSQPEMASFSSF*IFLVIF
Trigger: AAAGATGACTAAGAAGATCAAGAAGCTGGAGAAAGA...TGCCATCTCTGGCTGAGATACTGCTGTCCTGTGAAGTGTTTCCCATGACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TCTGCAGCCATTTTATGGATTTCTGGGGCCCAGTCAATAGTTCAATTTCATTTCCCTTTGGGTGATCTCTaGTCAATCATTTGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: SAAILWISGAQSIVQFHFPLGDL*SIICAG
Trigger: GCCTGCACAAATGATTGACAAGAGATCACCCAAAGG...GAAATGAAATTGAACTATTGACTGGGCCCCAGAAATCCATAAAATGGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 90 bp AGCCCCGTTCTTTTTGTCTTGGTTCTTCATTGTGATGAGCGATGCTaGGTCAGGAGAAGATCCTTTAGAAACAAACACAGTTGCTATTTT +
Preference number: 5 (lower is better)
Translates to: SPVLFVLVLHCDERC*VRRRSFRNKHSCYF
Trigger: AAAATAGCAACTGTGTTTGTTTCTAAAGGATCTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAAGACAAAAAGAACGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS-3UTR CAA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTTGTGTTTGAAGACTTaGTCGATATGCTCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSLCLKT*SICSSR
Trigger: GCGCGAGGAGCATATCGACAAAGTCTTCAAACACAA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTGTAGGTCCTTGTGTTaGAAGACTTTGTCGATATGC +
Preference number: 5 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMCRSLC*KTLSIC
Trigger: GCATATCGACAAAGTCTTCAAACACAAGGACCTACA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TTGCAACAGCAGAACATTCAGCATATAGAATGGCTCTACACAGTACATAGTAGTTGCTGTTGTAGGTCCTaGTGTTTGAAGACTTTGTCG +
Preference number: 5 (lower is better)
Translates to: LQQQNIQHIEWLYTVHSSCCCRS*CLKTLS
Trigger: CGACAAAGTCTTCAAACACAAGGACCTACAACAGCA...ACTACTATGTACTGTGTAGAGCCATTCTATATGCTGAATGTTCTGCTGTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATCTTTCTCCAGCTTCTaGATCTTCTTAGTCATCTTT +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHISFSSF*IFLVIF
Trigger: AAAGATGACTAAGAAGATCAAGAAGCTGGAGAAAGA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp TACTTTGGAAAGCAGAAGCAGAGCAGCTGTAGTGATTGGTTGATTTGGTCAATGTTCAGAAATAATCCTTaGGGTGATCTCTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: YFGKQKQSSCSDWLIWSMFRNNP*GDLLSI
Trigger: GATTGACAAGAGATCACCCAAAGGATTATTTCTGAA...CATTGACCAAATCAACCAATCACTACAGCTGCTCTGCTTCTGCTTTCCAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS-3UTR CAA 90 bp CAAACACTGGCTAATACCCTGGCAAGTTTGCAACAGCAGAACATTCAGCATATATTCAGAAATAATCCTTaGGGTGATCTCTTGTCAATC +
Preference number: 5 (lower is better)
Translates to: QTLANTLASLQQQNIQHIFRNNP*GDLLSI
Trigger: GATTGACAAGAGATCACCCAAAGGATTATTTCTGAA...TATATGCTGAATGTTCTGCTGTTGCAAACTTGCCAGGGTATTAGCCAGTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp AGGCCCGGGCGGAGGGCGCCAACGGCTCTCTGGTCTTaGCGGGTCAGGAGAGCCCGACGTGCCGGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: RPGRRAPTALWS*RVRRARRAGAG
Trigger: GCCTGCCCCGGCACGTCGGGCTCTCCTGACCCGCCAAGACCAGAGAGCCGTTGGCGCCCTCCGCCCGGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS CAA 72 bp CAGGCCCGGGCGGAGGGCGCCAACGGCTCTCTGGTCTaGGCGGGTCAGGAGAGCCCGACGTGCCGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: QARAEGANGSLV*AGQESPTCRGR
Trigger: CCTGCCCCGGCACGTCGGGCTCTCCTGACCCGCCAAGACCAGAGAGCCGTTGGCGCCCTCCGCCCGGGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS GCA 72 bp GGCTCTCTGGTCTTGGCGGGTCAGGAGAGCCCGACGTaGCGGGGCAGGCTTTCGGGGCGCAGCTCCCACAGC +
Preference number: 6 (lower is better)
Translates to: GSLVLAGQESPT*RGRLSGRSSHS
Trigger: GCTGTGGGAGCTGCGCCCCGAAAGCCTGCCCCGGCACGTCGGGCTCTCCTGACCCGCCAAGACCAGAGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS GCA 72 bp AGGAGCCTGGCTGCTGCCGGGACCTTCTGCTTCTACTaGAGGAGCCGCCTGGCTGGGCCGCTCCTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RSLAAAGTFCFY*RSRLAGPLLGS
Trigger: GGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp GCTTCTACTGCAGGAGCCGCCTGGCTGGGCCGCTCCTaGGCTCCCTCGGGTCCTGCTTCCGGTTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ASTAGAAWLGRS*APSGPASGCPG
Trigger: CCCAGGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp CGGGACCTTCTGCTTCTACTGCAGGAGCCGCCTGGCTaGGCCGCTCCTGGGCTCCCTCGGGTCCTGCTTCCG +
Preference number: 6 (lower is better)
Translates to: RDLLLLLQEPPG*AAPGLPRVLLP
Trigger: CGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp CTGCCGGGACCTTCTGCTTCTACTGCAGGAGCCGCCTaGCTGGGCCGCTCCTGGGCTCCCTCGGGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: LPGPSASTAGAA*LGRSWAPSGPA
Trigger: AGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGAAGCAGAAGGTCCCGGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 90 bp AGGGAGCGGTTGTGCCGCTGCAGCTCACGGCATAGGCTCTCAAGCTaGCTGCGGGCCAGGACGGCCTTGCTGTGCTCACCGCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: RERLCRCSSRHRLSS*LRARTALLCSPRRW
Trigger: CCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCACAACCGCTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS TCA 72 bp CTGTGCTCGGTGCTCCTGGGTAGCAAGGCGCTTCTGTaGCCCTGGGGGAGCTGGGTGCTTGAGCCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LCSVLLGSKALL*PWGSWVLEPQA
Trigger: GGCCTGGGGCTCAAGCACCCAGCTCCCCCAGGGTCACAGAAGCGCCTTGCTACCCAGGAGCACCGAGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp CGCCTGGCTGGGCCGCTCCTGGGCTCCCTCGGGTCCTaGTTCCGGTTGTCCTGGGCTGCTTTTTGGATTGGA +
Preference number: 6 (lower is better)
Translates to: RLAGPLLGSLGS*FRLSWAAFWIG
Trigger: TCCAATCCAAAAAGCAGCCCAGGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCCCAGCCAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp TGTGCCGCTGCAGCTCACGGCATAGGCTCTCAAGCTTaGTGCGGGCCAGGACGGCCTTGCTGTGCTCACCGC +
Preference number: 6 (lower is better)
Translates to: CAAAAHGIGSQA*CGPGRPCCAHR
Trigger: GCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp CTGGGTCAGGAGAAGATCCTCACCGCCGACGTCCGATaGCTTCCCCACCTCTGGCCTCGCACCGGAAACCCC +
Preference number: 6 (lower is better)
Translates to: LGQEKILTADVR*LPHLWPRTGNP
Trigger: GGGGTTTCCGGTGCGAGGCCAGAGGTGGGGAAGCCATCGGACGTCGGCGGTGAGGATCTTCTCCTGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS TCA 72 bp CCTGGCGGAGGTGGGCTCTTGAGGCCCAGTCTGGCCTaGTGCTTCTGTGCTCGGTGCTCCTGGGTAGCAAGG +
Preference number: 6 (lower is better)
Translates to: PGGGGLLRPSLA*CFCARCSWVAR
Trigger: CCTTGCTACCCAGGAGCACCGAGCACAGAAGCATCAGGCCAGACTGGGCCTCAAGAGCCCACCTCCGCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp CTCTCAAGCTTGCTGCGGGCCAGGACGGCCTTGCTGTaGTCACCGCGCAGGTGGTCCTTCTCTTGCACCAGC +
Preference number: 6 (lower is better)
Translates to: LSSLLRARTALL*SPRRWSFSCTS
Trigger: GCTGGTGCAAGAGAAGGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 72 bp TTGTGCCGCTGCAGCTCACGGCATAGGCTCTCAAGCTaGCTGCGGGCCAGGACGGCCTTGCTGTGCTCACCG +
Preference number: 6 (lower is better)
Translates to: LCRCSSRHRLSS*LRARTALLCSP
Trigger: CGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 90 bp AGCTCACGGCATAGGCTCTCAAGCTTGCTGCGGGCCAGGACGGCCTaGCTGTGCTCACCGCGCAGGTGGTCCTTCTCTTGCACCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSRHRLSSLLRARTA*LCSPRRWSFSCTSW
Trigger: CCAGCTGGTGCAAGAGAAGGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATGCCGTGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 72 bp CATAGGCTCTCAAGCTTGCTGCGGGCCAGGACGGCCTaGCTGTGCTCACCGCGCAGGTGGTCCTTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: HRLSSLLRARTA*LCSPRRWSFSC
Trigger: GCAAGAGAAGGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp ATAGGCTCTCAAGCTTGCTGCGGGCCAGGACGGCCTTaGTGTGCTCACCGCGCAGGTGGTCCTTCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: IGSQACCGPGRP*CAHRAGGPSLA
Trigger: TGCAAGAGAAGGACCACCTGCGCGGTGAGCACAGCAAGGCCGTCCTGGCCCGCAGCAAGCTTGAGAGCCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp CTCCTGGGCTCCCTCGGGTCCTGCTTCCGGTTGTCCTaGGCTGCTTTTTGGATTGGATTGTTTGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LLGSLGSCFRLS*AAFWIGLFGSP
Trigger: GGGGCTGCCAAACAATCCAATCCAAAAAGCAGCCCAGGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp GGCCTTCGATGGTCTCGGTCTCCGACCTCGTCACTCTaGCGGATCTCTTCTGTGTTTGGATCCCCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: GLRWSRSPTSSL*RISSVFGSPLE
Trigger: CTCCAAGGGGGATCCAAACACAGAAGAGATCCGGCAGAGTGACGAGGTCGGAGACCGAGACCATCGAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp ACTGCCTCTTTCAGGAGAAAATCCTTCTCCCGCTGGTaGCGCTCTTCTGCCTCCTTTAGCATCTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TASFRRKSFSRW*RSSASFSISWA
Trigger: GGCCCAGGAGATGCTAAAGGAGGCAGAAGAGCGGCACCAGCGGGAGAAGGATTTTCTCCTGAAAGAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp GCCTCTCAGCCAGCTCCATGTTCTCTTGGCGCAGCTTaGAGTTGCGCTCATTGTGCTGTTCCATCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: ASQPAPCSLGAA*SCAHCAVPSAA
Trigger: AGCTGCAGATGGAACAGCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGAACATGGAGCTGGCTGAGAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 72 bp AGCCTCTCAGCCAGCTCCATGTTCTCTTGGCGCAGCTaGGAGTTGCGCTCATTGTGCTGTTCCATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLSASSMFSWRS*ELRSLCCSICS
Trigger: GCTGCAGATGGAACAGCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGAACATGGAGCTGGCTGAGAGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 90 bp CCCCTGGTTATTGTCCACACAGTATGTGCTCAGTATGTCTTCCAGTaGGCGGCTCAGCTCCTCAGAGACATCACGAAGGGCCCCAGACTG +
Preference number: 6 (lower is better)
Translates to: PLVIVHTVCAQYVFQ*AAQLLRDITKGPRL
Trigger: CAGTCTGGGGCCCTTCGTGATGTCTCTGAGGAGCTGAGCCGCCAACTGGAAGACATACTGAGCACATACTGTGTGGACAATAACCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 90 bp CCGACCTCGTCACTCTGCCGGATCTCTTCTGTGTTTGGATCCCCCTaGGAGGGTTCCTTCTCTCCATTGACTACTGGAGTTGGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: PTSSLCRISSVFGSP*EGSFSPLTTGVGSG
Trigger: GCCTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACACAGAAGAGATCCGGCAGAGTGACGAGGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp TTTTCTCCTCAGCCATCTCAAGCAGGGCCTTGTTGCTaGTCTCCCACCGGGACCGGTACATGGTGGTTTCTT +
Preference number: 6 (lower is better)
Translates to: FSPQPSQAGPCC*SPTGTGTWWFL
Trigger: AAGAAACCACCATGTACCGGTCCCGGTGGGAGAGCAGCAACAAGGCCCTGCTTGAGATGGCTGAGGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 72 bp CAGCTTCTTGAGCCTCTCAGCCAGCTCCATGTTCTCTaGGCGCAGCTTGGAGTTGCGCTCATTGTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: QLLEPLSQLHVL*AQLGVALIVLF
Trigger: GAACAGCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGAACATGGAGCTGGCTGAGAGGCTCAAGAAGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp ATTGACTACTGGAGTTGGTTCAGGCTCCCCATTCCTTaGCACATAGGTCCGGGACTTCTCTGCATCTTCGGG +
Preference number: 6 (lower is better)
Translates to: IDYWSWFRLPIP*HIGPGLLCIFG
Trigger: CCCGAAGATGCAGAGAAGTCCCGGACCTATGTGGCAAGGAATGGGGAGCCTGAACCAACTCCAGTAGTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp CCGCGCAGGTGGTCCTTCTCTTGCACCAGCTGGCTCTaGTTTTTCTGTAGGAGCTTCATCTGCTTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: PRRWSFSCTSWL*FFCRSFICFCE
Trigger: TTCACAGAAGCAGATGAAGCTCCTACAGAAAAAGCAGAGCCAGCTGGTGCAAGAGAAGGACCACCTGCGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp CAGCCAGCTCCATGTTCTCTTGGCGCAGCTTGGAGTTaGGCTCATTGTGCTGTTCCATCTGCAGCTGAATGT +
Preference number: 6 (lower is better)
Translates to: QPAPCSLGAAWS*AHCAVPSAAEC
Trigger: ACATTCAGCTGCAGATGGAACAGCACAATGAGCGCAACTCCAAGCTGCGCCAAGAGAACATGGAGCTGGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp TCTACTGCCTCTTTCAGGAGAAAATCCTTCTCCCGCTaGTGCCGCTCTTCTGCCTCCTTTAGCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: STASFRRKSFSR*CRSSASFSISW
Trigger: CCAGGAGATGCTAAAGGAGGCAGAAGAGCGGCACCAGCGGGAGAAGGATTTTCTCCTGAAAGAGGCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS TCA 72 bp TGTTTGGATCCCCCTTGGAGGGTTCCTTCTCTCCATTaGCTACTGGAGTTGGTTCAGGCTCCCCATTCCTTG +
Preference number: 6 (lower is better)
Translates to: CLDPPWRVPSLH*LLELVQAPHSL
Trigger: CAAGGAATGGGGAGCCTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp AAGACTTTGTCGATATGCTCCTCGCGCAGCTCATACTaGTCAATCAGCTTCTTGAGCCTCTCAGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: KTLSICSSRSSY*SISFLSLSASS
Trigger: GGAGCTGGCTGAGAGGCTCAAGAAGCTGATTGAGCAGTATGAGCTGCGCGAGGAGCATATCGACAAAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp ATCCCCCTTGGAGGGTTCCTTCTCTCCATTGACTACTaGAGTTGGTTCAGGCTCCCCATTCCTTGCCACATA +
Preference number: 6 (lower is better)
Translates to: IPLGGFLLSIDY*SWFRLPIPCHI
Trigger: TATGTGGCAAGGAATGGGGAGCCTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CAA 72 bp GTGTTTGGATCCCCCTTGGAGGGTTCCTTCTCTCCATaGACTACTGGAGTTGGTTCAGGCTCCCCATTCCTT +
Preference number: 6 (lower is better)
Translates to: VFGSPLEGSFSP*TTGVGSGSPFL
Trigger: AAGGAATGGGGAGCCTGAACCAACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS TCA 72 bp TTGGAGTTGCGCTCATTGTGCTGTTCCATCTGCAGCTaGATGTCATTCAGTGTCACCTGGAAGTGCGAGGTC +
Preference number: 6 (lower is better)
Translates to: LELRSLCCSICS*MSFSVTWKCEV
Trigger: GACCTCGCACTTCCAGGTGACACTGAATGACATTCAGCTGCAGATGGAACAGCACAATGAGCGCAACTCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp GTTCTTTTTGTCTTGGTTCTTCATTGTGATGAGCGATaGTGGGTCAGGAGAAGATCCTCACCGCCGACGTCC +
Preference number: 6 (lower is better)
Translates to: VLFVLVLHCDER*WVRRRSSPPTS
Trigger: GGACGTCGGCGGTGAGGATCTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAAGACAAAAAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS GCA 72 bp ACCAGCTGGCTCTGCTTTTTCTGTAGGAGCTTCATCTaGTTCTGTGAATTCCGGTGCTCCTCCAGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: TSWLCFFCRSFI*FCEFRCSSSSS
Trigger: TGAACTGCTGGAGGAGCACCGGAATTCACAGAAGCAGATGAAGCTCCTACAGAAAAAGCAGAGCCAGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp CTTTTTGTCTTGGTTCTTCATTGTGATGAGCGATGCTaGGTCAGGAGAAGATCCTCACCGCCGACGTCCGAT +
Preference number: 6 (lower is better)
Translates to: LFVLVLHCDERC*VRRRSSPPTSD
Trigger: ATCGGACGTCGGCGGTGAGGATCTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAAGACAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373610.8
CDS CAA 72 bp TCACTCTGCCGGATCTCTTCTGTGTTTGGATCCCCCTaGGAGGGTTCCTTCTCTCCATTGACTACTGGAGTT +
Preference number: 6 (lower is better)
Translates to: SLCRISSVFGSP*EGSFSPLTTGV
Trigger: AACTCCAGTAGTCAATGGAGAGAAGGAACCCTCCAAGGGGGATCCAAACACAGAAGAGATCCGGCAGAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS GCA 72 bp AGCTTCTCCTCTGGGGTACTCAGAGTATTCAATGTCTaGATCAGCAACGTGATCTCCTTCCCCAAACCCTTG +
Preference number: 6 (lower is better)
Translates to: SFSSGVLRVFNV*ISNVISFPKPL
Trigger: CAAGGGTTTGGGGAAGGAGATCACGTTGCTGATGCAGACATTGAATACTCTGAGTACCCCAGAGGAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373609.1
ENST00000373610.8
CDS CCA 72 bp GTTGCTATTTTCCAGACTTCGAAATTCTTCGCAGCCTaGATCAGAAATCCCCACAGCAGGCGCACAAAGCTT +
Preference number: 6 (lower is better)
Translates to: VAIFQTSKFFAA*IRNPHSRRTKL
Trigger: AAGCTTTGTGCGCCTGCTGTGGGGATTTCTGATCCAGGCTGCGAAGAATTTCGAAGTCTGGAAAATAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS GCA 72 bp GTTCTTTTTGTCTTGGTTCTTCATTGTGATGAGCGATaGTGGGTCAGGAGAAGATCCTTTAGAAACAAACAC +
Preference number: 6 (lower is better)
Translates to: VLFVLVLHCDER*WVRRRSFRNKH
Trigger: GTGTTTGTTTCTAAAGGATCTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAAGACAAAAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373609.1
CDS CCA 72 bp CTTTTTGTCTTGGTTCTTCATTGTGATGAGCGATGCTaGGTCAGGAGAAGATCCTTTAGAAACAAACACAGT +
Preference number: 6 (lower is better)
Translates to: LFVLVLHCDERC*VRRRSFRNKHS
Trigger: ACTGTGTTTGTTTCTAAAGGATCTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAAGACAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373609.1