RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TWSG1-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000264964

Ensembl transcript IDs: ENST00000584509.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp ACTCAGCGCCCCGAGCCTCGGCCTCGCATCGCTAGAACCCGGCCATaGCCGCTTCCTTACAGGGCAGCTGTGAGGAGTCCTGAGGAATTT +
Preference number: 5 (lower is better)
Translates to: TQRPEPRPRIARTRP*PLPYRAAVRSPEEF
Trigger: AAATTCCTCAGGACTCCTCACAGCTGCCCTGTAAGGAAGCGGCCATGGCCGGGTTCTAGCGATGCGAGGCCGAGGCTCGGGGCGCTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS TCA 90 bp GCATCGCTAGAACCCGGCCATGGCCGCTTCCTTACAGGGCAGCTGTaGGGAGTCCTGAGGAATTTTAGTACACGGCATATCCTCAGCGTA +
Preference number: 5 (lower is better)
Translates to: ASLEPGHGRFLTGQL*GVLRNFSTRHILSV
Trigger: TACGCTGAGGATATGCCGTGTACTAAAATTCCTCAGGACTCCTCACAGCTGCCCTGTAAGGAAGCGGCCATGGCCGGGTTCTAGCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CCA 90 bp TATGCAGCCATAAAAAGGAACGAGATAATGTCCTTTGCAGGGACGTaGATGAAGCTGGAAGCCATTATCCTCAGCAAACTATGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: YAAIKRNEIMSFAGT*MKLEAIILSKLCRN
Trigger: GTTCCTGCATAGTTTGCTGAGGATAATGGCTTCCAGCTTCATCCACGTCCCTGCAAAGGACATTATCTCGTTCCTTTTTATGGCTGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CCA 90 bp TACAGTGTGGTGATTCCTCAGAGATTTATAACTGGAAGTACCATTTaGCCTAGCAATCCCATTACTGGGTATGTATACCCAAAGGAATAT +
Preference number: 5 (lower is better)
Translates to: YSVVIPQRFITGSTI*PSNPITGYVYPKEY
Trigger: ATATTCCTTTGGGTATACATACCCAGTAATGGGATTGCTAGGCCAAATGGTACTTCCAGTTATAAATCTCTGAGGAATCACCACACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS TCA 90 bp AGAAATAAGGCAAGCATGTCTGCTCTCACAAGTTGTATTCAGCATTaGACTGGAGGTCCTAATTTGTTCCATAAGGCAATAAGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: RNKASMSALTSCIQH*TGGPNLFHKAIRRK
Trigger: TTTTCTTCTTATTGCCTTATGGAACAAATTAGGACCTCCAGTTCAATGCTGAATACAACTTGTGAGAGCAGACATGCTTGCCTTATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CCA 72 bp CCCGAGCCTCGGCCTCGCATCGCTAGAACCCGGCCATaGCCGCTTCCTTACAGGGCAGCTGTGAGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: PEPRPRIARTRP*PLPYRAAVRSP
Trigger: AGGACTCCTCACAGCTGCCCTGTAAGGAAGCGGCCATGGCCGGGTTCTAGCGATGCGAGGCCGAGGCTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CAA 72 bp TGGCTAGCACATCACAAGGCTTTAATCTTAACACTGTaGATCTTAACACTGCAACTGAGGGGGCCCGGAGAA +
Preference number: 6 (lower is better)
Translates to: WLAHHKALILTL*ILTLQLRGPGE
Trigger: TTCTCCGGGCCCCCTCAGTTGCAGTGTTAAGATCAACAGTGTTAAGATTAAAGCCTTGTGATGTGCTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CCA 72 bp ATAAAAAGGAACGAGATAATGTCCTTTGCAGGGACGTaGATGAAGCTGGAAGCCATTATCCTCAGCAAACTA +
Preference number: 6 (lower is better)
Translates to: IKRNEIMSFAGT*MKLEAIILSKL
Trigger: TAGTTTGCTGAGGATAATGGCTTCCAGCTTCATCCACGTCCCTGCAAAGGACATTATCTCGTTCCTTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS TCA 72 bp GCAAGCATGTCTGCTCTCACAAGTTGTATTCAGCATTaGACTGGAGGTCCTAATTTGTTCCATAAGGCAATA +
Preference number: 6 (lower is better)
Translates to: ASMSALTSCIQH*TGGPNLFHKAI
Trigger: TATTGCCTTATGGAACAAATTAGGACCTCCAGTTCAATGCTGAATACAACTTGTGAGAGCAGACATGCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CCA 72 bp GTGATTCCTCAGAGATTTATAACTGGAAGTACCATTTaGCCTAGCAATCCCATTACTGGGTATGTATACCCA +
Preference number: 6 (lower is better)
Translates to: VIPQRFITGSTI*PSNPITGYVYP
Trigger: TGGGTATACATACCCAGTAATGGGATTGCTAGGCCAAATGGTACTTCCAGTTATAAATCTCTGAGGAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584509.2
CDS CCA 72 bp ACATGGAATCAACCCAAATGCCCATCGATGATAGACTaGATAAAGAAAATGTGGTACATATACATCATGGAA +
Preference number: 6 (lower is better)
Translates to: TWNQPKCPSMID*IKKMWYIYIME
Trigger: TTCCATGATGTATATGTACCACATTTTCTTTATCCAGTCTATCATCGATGGGCATTTGGGTTGATTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584509.2