Pregenerated sensors for TWIST1 (Homo sapiens)
Ensembl gene IDs: ENSG00000122691Ensembl transcript IDs: ENST00000242261.6, ENST00000354571.5, ENST00000443687.5
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAACACAAACAACTGTTCAGACTTCTATCAGAATGCAGAGGTGTaGGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCC | + |
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Preference number: 1 (lower is better) Translates to: KNTNNCSDFYQNAEV*GWCRCPSGNHCPRA Trigger: GGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTCTGATAGAAGTCTGAACAGTTGTTTGTGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| 3UTR TCA 90 bp | TTAATAATACGTTCCACTTTGGGGAGGGGAACCTGTAACTGTGCGTaGATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LIIRSTLGRGTCNCA*IIIWTCASSQQSWP Trigger: TGGCCATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTACAGGTTCCCCTCCCCAAAGTGGAACGTATTATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| 3UTR CCA 72 bp | GAATGCAGAGGTGTGAGGATGGTGCCGCTGCCCGTCTaGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ECRGVRMVPLPV*ESLSTGLSRFL Trigger: GAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| 3UTR-3UTR CAA 90 bp | GTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTCCACGCCCTGTTTCTTaGAATTTGGATTTTGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: VPLPVWESLSTGLSRFLFPRPVS*NLDFAL Trigger: AAGAGCAAAATCCAAATTCAAAGAAACAGGGCGTGG...AAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| 3UTR TCA 72 bp | AACAACTGTTCAGACTTCTATCAGAATGCAGAGGTGTaGGGATGGTGCCGCTGCCCGTCTGGGAATCACTGT | + |
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Preference number: 3 (lower is better) Translates to: NNCSDFYQNAEV*GWCRCPSGNHC Trigger: ACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTCTGATAGAAGTCTGAACAGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| 3UTR TCA 72 bp | CGTTCCACTTTGGGGAGGGGAACCTGTAACTGTGCGTaGATTATCATCTGGACATGTGCTTCTTCTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RSTLGRGTCNCA*IIIWTCASSQQ Trigger: CTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTACAGGTTCCCCTCCCCAAAGTGGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| 3UTR TCA 72 bp | GAGAAAGTCCATAGTGATGCCTTTCCTTTCAGTGGCTaGTTGGCACGACCTCTTGAGAATGCATGCATGAAA | + |
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Preference number: 3 (lower is better) Translates to: EKVHSDAFPFSG*LARPLENACMK Trigger: TTTCATGCATGCATTCTCAAGAGGTCGTGCCAATCAGCCACTGAAAGGAAAGGCATCACTATGGACTTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | TGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGAGCCCGCAGACTTCTTaGCGCGCTTGCCCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: CEDGAAARLGITVHGPVSSPQTS*RACPGP Trigger: CGGCCCAGGGCAAGCGCGGCAAGAAGTCTGCGGGCT...CGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | TGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCGGCTGCTGCCGGTCTaGCTCTTCCTCGCTGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: CEDGAAARLGITVHGPVSRLLPV*LFLAVA Trigger: AGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCG...CGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR TCA 90 bp | GCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTTACCCGCACGTTGGCCATaGCCCGCTGCGTCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: AAARLGITVHGPVSLSLLPARWP*PAASAA Trigger: AGCTGCAGACGCAGCGGGTCATGGCCAACGTGCGGG...TAAAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | GCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTTAAAAGCGCCCAACGGCTaGACGCACACCCCGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AAARLGITVHGPVSLSLLKAPNG*THTPPG Trigger: GCCTGGCGGGGTGTGCGTCCAGCCGTTGGGCGCTTT...TAAAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | GCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTTAGTCGGCCGGCGAGACTaGCGAGCTGGACACGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AAARLGITVHGPVSLSLLVGRRD*RAGHVL Trigger: CAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGAC...TAAAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | CAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTCTCCGGCCCGCCCTGCTGAGGGGGTaGGGGGCTCCGCCTGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: QSWPAPSWCTLRNLGLRPALLRG*GAPPAS Trigger: ACTAGCAGGCGGAGCCCCCCACCCCCTCAGCAGGGC...GGGCCGGAGACCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000354571.5 ENST00000443687.5 |
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| CDS-3UTR GCA 90 bp | CAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTCTCCGGCCCAGCCCGCAGACTTCTTaGCGCGCTTGCCCTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QSWPAPSWCTLRNLGLRPSPQTS*RACPGP Trigger: CGGCCCAGGGCAAGCGCGGCAAGAAGTCTGCGGGCT...GGGCCGGAGACCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR GCA 90 bp | ATCAGAATGCAGAGGTGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCAAACGGTGCCGGTGCTaGAGAGCCCGCGAGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: IRMQRCEDGAAARLGITVKRCRC*RAREVS Trigger: AGACACCTCGCGGGCTCTGCAGCACCGGCACCGTTT...GACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | CAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTCTCCGGCCCAGTGGGACGCGGACATaGACCAGGCCCCCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: QSWPAPSWCTLRNLGLRPSGTRT*TRPPPS Trigger: GGATGGAGGGGGCCTGGTCCATGTCCGCGTCCCACT...GGGCCGGAGACCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000354571.5 ENST00000443687.5 |
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| CDS-3UTR GCA 90 bp | CGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTTAAAGCTCTTCCTCGCTGTTaGTCAGGCTGTCGTCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RCPSGNHCPRACLAFSFKALPRC*SGCRRP Trigger: CGGCCGACGACAGCCTGAGCAACAGCGAGGAAGAGC...TTTAAAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | TCTGAATTGTATCACACCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACGCCCTGCTGAGGGGGTaGGGGGCTCCGCCTGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: SELYHTFSAVMASSILVYALLRG*GAPPAS Trigger: ACTAGCAGGCGGAGCCCCCCACCCCCTCAGCAGGGC...GTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGGTGTGATACAATTCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS-3UTR GCA 90 bp | GTGATGCCTTTCCTTTCAGTGGCTGATTGGCACGACCTCTTGAGAATGCATGCAGCCTCCTGGAAACGGTaGCGGTGCTGCAGAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VMPFLSVADWHDLLRMHAASWKR*RCCRAR Trigger: GCGGGCTCTGCAGCACCGGCACCGTTTCCAGGAGGC...TGCATGCATTCTCAAGAGGTCGTGCCAATCAGCCACTGAAAGGAAAGGCATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | ATCAGAATGCAGAGGTGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCGCGAGACTGGCGAGCTaGACACGTCCTGCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: IRMQRCEDGAAARLGITVARLAS*TRPASS Trigger: AGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGC...GACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | GTGATGCCTTTCCTTTCAGTGGCTGATTGGCACGACCTCTTGAGAATGCATGCAGTGCCGCTGCCCGTCTaGGAATCACTGTCCACGGGC | + |
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Preference number: 4 (lower is better) Translates to: VMPFLSVADWHDLLRMHAVPLPV*ESLSTG Trigger: GCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCAC...TGCATGCATTCTCAAGAGGTCGTGCCAATCAGCCACTGAAAGGAAAGGCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR TCA 90 bp | CCTGTAACTGTGCGTGAATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATCCCGCACGTTGGCCATaGCCCGCTGCGTCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PVTVRELSSGHVLLLSSHPARWP*PAASAA Trigger: AGCTGCAGACGCAGCGGGTCATGGCCAACGTGCGGG...ATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR TCA 90 bp | GAATTGTATCACACCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTACCTGGCCGCCAGCTTaGGGGTCTGAATCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ELYHTFSAVMASSILVYLTWPPA*GSESCS Trigger: TGAGCAAGATTCAGACCCTCAAGCTGGCGGCCAGGT...AAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGGTGTGATACAATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS-3UTR GCA 90 bp | GCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTTAGACACCGGATCTATTTaGATTTTACCATGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AAARLGITVHGPVSLSLLDTGSI*ILPWVL Trigger: GAGGACCCATGGTAAAATGCAAATAGATCCGGTGTC...TAAAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | CCTGTAACTGTGCGTGAATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATAGTGGGACGCGGACATaGACCAGGCCCCCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: PVTVRELSSGHVLLLSSHSGTRT*TRPPPS Trigger: GGATGGAGGGGGCCTGGTCCATGTCCGCGTCCCACT...ATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR CCA 90 bp | AAAACACAAACAACTGTTCAGACTTCTATCAGAATGCAGAGGTGTGAGGATGGTGCCCTGCTGAGGGGGTaGGGGGCTCCGCCTGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: KTQTTVQTSIRMQRCEDGALLRG*GAPPAS Trigger: ACTAGCAGGCGGAGCCCCCCACCCCCTCAGCAGGGC...ACCATCCTCACACCTCTGCATTCTGATAGAAGTCTGAACAGTTGTTTGTGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR TCA 90 bp | TTCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGACCTGGCCGCCAGCTTaGGGGTCTGAATCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: FFSAVMASSILVYLKKSRTWPPA*GSESCS Trigger: TGAGCAAGATTCAGACCCTCAAGCTGGCGGCCAGGT...CCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR GCA 90 bp | TTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCTGGAATGGAAACGGTGCCGGTaGTGCAGAGCCCGCGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSYPAPESLDCPFSPSLEWKRCR*CRAREV Trigger: CACCTCGCGGGCTCTGCAGCACCGGCACCGTTTCCA...TTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR TCA 90 bp | TTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCTGGAACAGAATGCAGAGGTGTaGGGATGGTGCCGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FSYPAPESLDCPFSPSLEQNAEV*GWCRCP Trigger: CGGGCAGCGGCACCATCCTCACACCTCTGCATTCTG...TTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | TCTGAATTGTATCACACCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCGTGAGCCACATAGCTaGAGCTTGCCATCTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SELYHTFSAVMASSILVYREPHS*SLPSWS Trigger: ACTCCAAGATGGCAAGCTGCAGCTATGTGGCTCACG...GTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGGTGTGATACAATTCAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS-3UTR CCA 90 bp | TTTATTTTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCCCCGCCAGGCCTCCTaGAAACGGTGCCGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FIFSYPAPESLDCPFSPSPRQAS*KRCRCC Trigger: GCAGCACCGGCACCGTTTCCAGGAGGCCTGGCGGGG...AGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAAAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | TTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTCTCACATAGCTGCAGCTTaGCATCTTGGAGTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FSAVMASSILVYLKKSRSHIAAA*HLGVQL Trigger: GAGCTGGACTCCAAGATGGCAAGCTGCAGCTATGTG...AGACCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000354571.5 ENST00000443687.5 |
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| CDS-3UTR GCA 90 bp | AAAACACAAACAACTGTTCAGACTTCTATCAGAATGCAGAGGTGTGAGGATGGTGAGCTGGACACGTCCTaGATCATCTCTCGAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: KTQTTVQTSIRMQRCEDGELDTS*IISRAA Trigger: CGCCGCTCGAGAGATGATGCAGGACGTGTCCAGCTC...ACCATCCTCACACCTCTGCATTCTGATAGAAGTCTGAACAGTTGTTTGTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | GTAACTGTGCGTGAATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATGGCCACATAGCTGCAGCTTaGCATCTTGGAGTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VTVRELSSGHVLLLSSHGHIAAA*HLGVQL Trigger: GAGCTGGACTCCAAGATGGCAAGCTGCAGCTATGTG...GCCATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR GCA 90 bp | GTAACTGTGCGTGAATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATGGCCGTGAGCCACATAGCTaGAGCTTGCCATCTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VTVRELSSGHVLLLSSHGREPHS*SLPSWS Trigger: ACTCCAAGATGGCAAGCTGCAGCTATGTGGCTCACG...GCCATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR CCA 90 bp | TTTATTTTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTAGTGGGACGCGGACATaGACCAGGCCCCCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: FIFSYPAPESLDCPFSPSSGTRT*TRPPPS Trigger: GGATGGAGGGGGCCTGGTCCATGTCCGCGTCCCACT...AGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR TCA 90 bp | AAAACACAAACAACTGTTCAGACTTCTATCAGAATGCAGAGGTGTGAGGATGGTACCTGGCCGCCAGCTTaGGGGTCTGAATCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KTQTTVQTSIRMQRCEDGTWPPA*GSESCS Trigger: TGAGCAAGATTCAGACCCTCAAGCTGGCGGCCAGGT...ACCATCCTCACACCTCTGCATTCTGATAGAAGTCTGAACAGTTGTTTGTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTGGCCAGCTCCATCCTaGTGTACCTTAAGAAATCTA | + |
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Preference number: 4 (lower is better) Translates to: FFSAVMASSILVYLKKSRWPAPS*CTLRNL Trigger: TAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCA...CCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCTGGAATTTCCTTTCAGTGGCTaGTTGGCACGACCTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: FSYPAPESLDCPFSPSLEFPFSG*LARPLE Trigger: CTCAAGAGGTCGTGCCAATCAGCCACTGAAAGGAAA...TTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | GCTTCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTATATCATCTGGACATGTaGTTCTTCTCAGCAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: ASSQQSWPAPSWCTLRNLYHLDM*FFSAVM Trigger: CATGACTGCTGAGAAGAAGCACATGTCCAGATGATA...TAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR TCA 90 bp | GTAACTGTGCGTGAATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATGGCACCTGTAACTGTGCGTaGATTATCATCTGGACATGT | + |
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Preference number: 4 (lower is better) Translates to: VTVRELSSGHVLLLSSHGTCNCA*IIIWTC Trigger: ACATGTCCAGATGATAATTCACGCACAGTTACAGGT...GCCATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR CCA 90 bp | TTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCTGGAACTTTCAGTGGCTGATTaGCACGACCTCTTGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: FSYPAPESLDCPFSPSLELSVAD*HDLLRM Trigger: CATTCTCAAGAGGTCGTGCCAATCAGCCACTGAAAG...TTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCACATAGCTGCAGCTTaGCATCTTGGAGTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FIFSYPAPESLDCPFSPSHIAAA*HLGVQL Trigger: GAGCTGGACTCCAAGATGGCAAGCTGCAGCTATGTG...AGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCGTGAGCCACATAGCTaGAGCTTGCCATCTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FIFSYPAPESLDCPFSPSREPHS*SLPSWS Trigger: ACTCCAAGATGGCAAGCTGCAGCTATGTGGCTCACG...AGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR TCA 90 bp | TTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCTGGAAATTGGCACGACCTCTTaGGAATGCATGCATGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: FSYPAPESLDCPFSPSLEIGTTS*ECMHEK Trigger: TTTTTCATGCATGCATTCTCAAGAGGTCGTGCCAAT...TTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTAGACTTCTATCAGAATaGAGAGGTGTGAGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FIFSYPAPESLDCPFSPSRLLSE*RGVRMV Trigger: CACCATCCTCACACCTCTGCATTCTGATAGAAGTCT...AGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAAAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CCA 90 bp | AGAAGCATAAGAATCCCAAATTGGTCAGGTAACCATCTTAATTTCCAGTTCAATTGGCCAGCTCCATCCTaGTGTACCTTAAGAAATCTA | + |
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Preference number: 4 (lower is better) Translates to: RSIRIPNWSGNHLNFQFNWPAPS*CTLRNL Trigger: TAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCA...ATTGAACTGGAAATTAAGATGGTTACCTGACCAATTTGGGATTCTTATGCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS-3UTR TCA 90 bp | TTTATTTTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTTTTTGCAGGCCAGTTTaGTCCCAGTATTTTTATTTC | + |
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Preference number: 4 (lower is better) Translates to: FIFSYPAPESLDCPFSPSFCRPV*SQYFYF Trigger: GAAATAAAAATACTGGGATCAAACTGGCCTGCAAAA...AGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAAAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 90 bp | TCTGCAGCTCCTCGTAAGACTGCGGACTCCCGCCGCCGCTGCTGCTaGCGCCGCCGCCGCCCGCGCCGCCGCCGCCGCCACAGCCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SAAPRKTADSRRRCC*RRRRPRRRRRHSPQ Trigger: CTGCGGGCTGTGGCGGCGGCGGCGGCGCGGGCGGCGGCGGCGGCAGCAGCAGCGGCGGCGGGAGTCCGCAGTCTTACGAGGAGCTGCAGA 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242261.6 ENST00000354571.5 |
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| CDS GCA 90 bp | GCTGCGTCTGCAGCTCCTCGTAAGACTGCGGACTCCCGCCGCCGCTaGTGCTGCCGCCGCCGCCGCCCGCGCCGCCGCCGCCGCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: AASAAPRKTADSRRR*CCRRRRPRRRRRHS Trigger: GCTGTGGCGGCGGCGGCGGCGCGGGCGGCGGCGGCGGCAGCAGCAGCGGCGGCGGGAGTCCGCAGTCTTACGAGGAGCTGCAGACGCAGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242261.6 ENST00000354571.5 |
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| CDS GCA 90 bp | CGCCCGCGCTGCGCCTGCTGCTGCGCCGCTTGCGTCCCCCGCGCTTaGCGCTCGGCGGCTGCTGCCGGTCTGGCTCTTCCTCGCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: RPRCACCCAACVPRA*RSAAAAGLALPRCC Trigger: GCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCGGCGCAGCAGCAGGCGCAGCGCGGGCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 90 bp | CTCAGGCTGTCGTCGGCCGGCGAGACTGGCGAGCTGGACACGTCCTaGATCATCTCTCGAGCGGCGACGCGTGGCCTCGCGGGCCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: LRLSSAGETGELDTS*IISRAATRGLAGPG Trigger: CCCCGGGCCCGCGAGGCCACGCGTCGCCGCTCGAGAGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CCA 90 bp | CCGCTTGCGTCCCCCGCGCTTGCCGCTCGGCGGCTGCTGCCGGTCTaGCTCTTCCTCGCTGTTGCTCAGGCTGTCGTCGGCCGGCGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PLASPALAARRLLPV*LFLAVAQAVVGRRD Trigger: GTCTCGCCGGCCGACGACAGCCTGAGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 90 bp | GCTTGCCGCTCGGCGGCTGCTGCCGGTCTGGCTCTTCCTCGCTGTTaGTCAGGCTGTCGTCGGCCGGCGAGACTGGCGAGCTGGACACGT | + |
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Preference number: 5 (lower is better) Translates to: ACRSAAAAGLALPRC*SGCRRPARLASWTR Trigger: ACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | TGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTGCTGCTGCGCCGCTaGCGTCCCCCGCGCTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: CEDGAAARLGITVHGPVSLLLRR*RPPRLP Trigger: CGGCAAGCGCGGGGGACGCAAGCGGCGCAGCAGCAG...CGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CCA 90 bp | CCTCGCTGTTGCTCAGGCTGTCGTCGGCCGGCGAGACTGGCGAGCTaGACACGTCCTGCATCATCTCTCGAGCGGCGACGCGTGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PRCCSGCRRPARLAS*TRPASSLERRRVAS Trigger: CGAGGCCACGCGTCGCCGCTCGAGAGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAGCAACAGCGAGG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CCA 90 bp | TGGCTCTTCCTCGCTGTTGCTCAGGCTGTCGTCGGCCGGCGAGACTaGCGAGCTGGACACGTCCTGCATCATCTCTCGAGCGGCGACGCG | + |
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Preference number: 5 (lower is better) Translates to: WLFLAVAQAVVGRRD*RAGHVLHHLSSGDA Trigger: CGCGTCGCCGCTCGAGAGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAGCAACAGCGAGGAAGAGCCA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | GTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTGGCTCTTCCTCGCTGTaGCTCAGGCTGTCGTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: VPLPVWESLSTGLSRFLFGSSSL*LRLSSA Trigger: GGCCGACGACAGCCTGAGCAACAGCGAGGAAGAGCC...AAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | TGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCCACATAGCTGCAGCTaGCCATCTTGGAGTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CEDGAAARLGITVHGPVSPHSCS*PSWSPA Trigger: AGCTGGACTCCAAGATGGCAAGCTGCAGCTATGTGG...CGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | GTGATGCCTTTCCTTTCAGTGGCTGATTGGCACGACCTCTTGAGAATGCATGCATGGCGCTCCCGCACGTaGGCCATGACCCGCTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: VMPFLSVADWHDLLRMHAWRSRT*AMTRCV Trigger: GACGCAGCGGGTCATGGCCAACGTGCGGGAGCGCCA...TGCATGCATTCTCAAGAGGTCGTGCCAATCAGCCACTGAAAGGAAAGGCATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | GTAACTGTGCGTGAATTATCATCTGGACATGTGCTTCTTCTCAGCAGTCATGGCTGGCGCTCCCGCACGTaGGCCATGACCCGCTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: VTVRELSSGHVLLLSSHGWRSRT*AMTRCV Trigger: GACGCAGCGGGTCATGGCCAACGTGCGGGAGCGCCA...GCCATGACTGCTGAGAAGAAGCACATGTCCAGATGATAATTCACGCACAGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTCCACATAGCTGCAGCTaGCCATCTTGGAGTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CFFSAVMASSILVYLKKSPHSCS*PSWSPA Trigger: AGCTGGACTCCAAGATGGCAAGCTGCAGCTATGTGG...AGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR CAA 90 bp | TATCACACCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAACCACATAGCTGCAGCTaGCCATCTTGGAGTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: YHTFSAVMASSILVYLKKPHSCS*PSWSPA Trigger: AGCTGGACTCCAAGATGGCAAGCTGCAGCTATGTGG...TTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGGTGTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS-3UTR CAA 90 bp | ATCAGAATGCAGAGGTGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCCCACGCCCTGTTTCTTaGAATTTGGATTTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: IRMQRCEDGAAARLGITVPRPVS*NLDFAL Trigger: AAGAGCAAAATCCAAATTCAAAGAAACAGGGCGTGG...GACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | CGCTGCCCGTCTGGGAATCACTGTCCACGGGCCTGTCTCGCTTTCTCTTTTAAAAGACACCGGATCTATTaGCATTTTACCATGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RCPSGNHCPRACLAFSFKRHRIY*HFTMGP Trigger: AGGACCCATGGTAAAATGCAAATAGATCCGGTGTCT...TTTAAAAGAGAAAGCGAGACAGGCCCGTGGACAGTGATTCCCAGACGGGCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | TTTAGTTATCCAGCTCCAGAGTCTCTAGACTGTCCATTTTCTCCTTCTCTGGAACTGCAGCTTGCCATCTaGGAGTCCAGCTCGTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: FSYPAPESLDCPFSPSLELQLAI*ESSSSL Trigger: GAGCGACGAGCTGGACTCCAAGATGGCAAGCTGCAG...TTCCAGAGAAGGAGAAAATGGACAGTCTAGAGACTCTGGAGCTGGATAACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | ATCAGAATGCAGAGGTGTGAGGATGGTGCCGCTGCCCGTCTGGGAATCACTGTCGTTTTGCAGGCCAGTTaGATCCCAGTATTTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: IRMQRCEDGAAARLGITVVLQAS*IPVFLF Trigger: AAATAAAAATACTGGGATCAAACTGGCCTGCAAAAC...GACAGTGATTCCCAGACGGGCAGCGGCACCATCCTCACACCTCTGCATTCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS-3UTR CAA 90 bp | TTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTCTATAATACGTTCCACTTaGGGGAGGGGAACCTGTAAC | + |
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Preference number: 5 (lower is better) Translates to: FSAVMASSILVYLKKSRSIIRST*GRGTCN Trigger: GTTACAGGTTCCCCTCCCCAAAGTGGAACGTATTAT...AGACCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354571.5 |
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| CDS-3UTR CAA 90 bp | TTTCTGAATTGTATCACACCTTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTTCTCCACATTTGTTCTaGTTCTCCATCTTGTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: FLNCITPSQQSWPAPSWCSPHLF*FSILSD Trigger: ATCAGACAAGATGGAGAACAAGAACAAATGTGGAGA...ACACCAGGATGGAGCTGGCCATGACTGCTGAGAAGGTGTGATACAATTCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS-3UTR CAA 90 bp | TTCTCAGCAGTCATGGCCAGCTCCATCCTGGTGTACCTTAAGAAATCTAGGTCTAAGTCATCTCCACATTaGTTCTTGTTCTCCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: FSAVMASSILVYLKKSRSKSSPH*FLFSIL Trigger: CAAGATGGAGAACAAGAACAAATGTGGAGATGACTT...AGACCTAGATTTCTTAAGGTACACCAGGATGGAGCTGGCCATGACTGCTGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443687.5 |
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| CDS CAA 90 bp | CCGCCCGCGCTGCGCCTGCTGCTGCGCCGCTTGCGTCCCCCGCGCTaGCCGCTCGGCGGCTGCTGCCGGTCTGGCTCTTCCTCGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PPALRLLLRRLRPPR*PLGGCCRSGSSSLL Trigger: CAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCGGCGCAGCAGCAGGCGCAGCGCGGGCGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CAA 72 bp | CTGCGCCTGCTGCTGCGCCGCTTGCGTCCCCCGCGCTaGCCGCTCGGCGGCTGCTGCCGGTCTGGCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRLLLRRLRPPR*PLGGCCRSGSS Trigger: GGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCGGCGCAGCAGCAGGCGCAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 72 bp | TGCGCCTGCTGCTGCGCCGCTTGCGTCCCCCGCGCTTaGCGCTCGGCGGCTGCTGCCGGTCTGGCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CACCCAACVPRA*RSAAAAGLALP Trigger: AGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCGGCGCAGCAGCAGGCGCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 72 bp | CGCCGCTTGCGTCCCCCGCGCTTGCCGCTCGGCGGCTaGTGCCGGTCTGGCTCTTCCTCGCTGTTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RRLRPPRLPLGG*CRSGSSSLLLR Trigger: CCTGAGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CCA 72 bp | CGCCCAACGGCTGGACGCACACCCCGCCAGGCCTCCTaGAAACGGTGCCGGTGCTGCAGAGCCCGCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RPTAGRTPRQAS*KRCRCCRAREV Trigger: CACCTCGCGGGCTCTGCAGCACCGGCACCGTTTCCAGGAGGCCTGGCGGGGTGTGCGTCCAGCCGTTGGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 72 bp | CGCTTGCGTCCCCCGCGCTTGCCGCTCGGCGGCTGCTaGCGGTCTGGCTCTTCCTCGCTGTTGCTCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLRPPRLPLGGC*RSGSSSLLLRL Trigger: CAGCCTGAGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCAAGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 72 bp | GCTGGACGCACACCCCGCCAGGCCTCCTGGAAACGGTaGCGGTGCTGCAGAGCCCGCGAGGTGTCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AGRTPRQASWKR*RCCRAREVSGS Trigger: ACTCCCAGACACCTCGCGGGCTCTGCAGCACCGGCACCGTTTCCAGGAGGCCTGGCGGGGTGTGCGTCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 72 bp | TCGTCGGCCGGCGAGACTGGCGAGCTGGACACGTCCTaGATCATCTCTCGAGCGGCGACGCGTGGCCTCGCG | + |
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Preference number: 6 (lower is better) Translates to: SSAGETGELDTS*IISRAATRGLA Trigger: CGCGAGGCCACGCGTCGCCGCTCGAGAGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS GCA 72 bp | TCGGCGGCTGCTGCCGGTCTGGCTCTTCCTCGCTGTTaGTCAGGCTGTCGTCGGCCGGCGAGACTGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SAAAAGLALPRC*SGCRRPARLAS Trigger: GCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGA 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CCA 72 bp | TGCTCAGGCTGTCGTCGGCCGGCGAGACTGGCGAGCTaGACACGTCCTGCATCATCTCTCGAGCGGCGACGC | + |
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Preference number: 6 (lower is better) Translates to: CSGCRRPARLAS*TRPASSLERRR Trigger: GCGTCGCCGCTCGAGAGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAGCA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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| CDS CCA 72 bp | CTCGCTGTTGCTCAGGCTGTCGTCGGCCGGCGAGACTaGCGAGCTGGACACGTCCTGCATCATCTCTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: LAVAQAVVGRRD*RAGHVLHHLSS Trigger: GCTCGAGAGATGATGCAGGACGTGTCCAGCTCGCCAGTCTCGCCGGCCGACGACAGCCTGAGCAACAGCGAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242261.6 |
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